Gene-Chemical Interaction Annotations
Click to see Annotation Detail View
References
References - curated
Genomics
Comparative Map Data
miRNA Target Status
Predicted Target Of
Summary Value | Count of predictions: | 348 | Count of miRNA genes: | 200 | Interacting mature miRNAs: | 230 | Transcripts: | ENSRNOT00000009582 | Prediction methods: | Microtar, Miranda, Rnahybrid, Targetscan | Result types: | miRGate_prediction | |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
QTLs in Region (GRCr8)
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
Markers in Region
BF419178 |
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Expression
RNA-SEQ Expression
alimentary part of gastrointestinal system
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appendage
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circulatory system
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ectoderm
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endocrine system
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endoderm
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exocrine system
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hemolymphoid system
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hepatobiliary system
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integumental system
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mesenchyme
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mesoderm
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nervous system
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renal system
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reproductive system
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respiratory system
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9 | 11 | 45 | 103 | 79 | 78 | 47 | 25 | 47 | 6 | 200 | 91 | 83 | 45 | 60 | 31 |
Sequence
Nucleotide Sequences
Ensembl Acc Id: | ENSRNOT00000009582 ⟹ ENSRNOP00000009582 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001106671 ⟹ NP_001100141 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017593264 ⟹ XP_017448753 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
Protein Sequences
Protein RefSeqs | NP_001100141 | (Get FASTA) | NCBI Sequence Viewer |
XP_017448753 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | EDL90469 | (Get FASTA) | NCBI Sequence Viewer |
Ensembl Protein | ENSRNOP00000009582.3 |
RefSeq Acc Id: | NP_001100141 ⟸ NM_001106671 |
- UniProtKB: | D3ZRX3 (UniProtKB/TrEMBL), A6JYN4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_017448753 ⟸ XM_017593264 |
- Peptide Label: | isoform X1 |
- UniProtKB: | D3ZRX3 (UniProtKB/TrEMBL), A6JYN4 (UniProtKB/TrEMBL) |
- Sequence: |
Ensembl Acc Id: | ENSRNOP00000009582 ⟸ ENSRNOT00000009582 |