Symbol: |
TTC22 |
Name: |
tetratricopeptide repeat domain 22 |
RGD ID: |
18556841 |
Description: |
|
Type: |
protein-coding
|
RefSeq Status: |
MODEL |
Previously known as: |
tetratricopeptide repeat protein 22 |
RGD Orthologs |
|
Alliance Orthologs |
|
More Info |
more info ...
|
More Info |
|
Latest Assembly: |
ChlSab1.1 - Green Monkey 1.1 Assembly |
Position: |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 20 | 78,134,698 - 78,157,092 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 78,134,959 - 78,157,897 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666033 | 39,124,547 - 39,148,837 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
JBrowse: |
View Region in Genome Browser (JBrowse)
|
Model |
|
TTC22 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 20 | 78,134,698 - 78,157,092 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 78,134,959 - 78,157,897 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666033 | 39,124,547 - 39,148,837 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
TTC22 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 1 | 54,779,712 - 54,801,323 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 54,779,712 - 54,801,323 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 55,245,385 - 55,266,996 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 55,022,812 - 55,039,459 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 1 | 53,534,348 - 53,554,537 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | p32.3 | NCBI | | | | | HuRef | 1 | 53,360,938 - 53,381,126 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 55,362,112 - 55,382,299 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 54,659,937 - 54,681,544 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Ttc22 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 4 | 106,479,646 - 106,497,393 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 106,479,629 - 106,497,386 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 106,622,449 - 106,640,196 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 106,622,432 - 106,640,189 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 106,295,054 - 106,312,792 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 106,120,381 - 106,138,121 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 104,983,496 - 105,003,183 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | C7 | NCBI | | | | | cM Map | 4 | 49.67 | NCBI | | | | |
|
Ttc22 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 5 | 126,630,808 - 126,651,954 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 121,401,973 - 121,423,130 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 121,406,326 - 121,423,130 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 124,019,040 - 124,035,827 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 125,742,088 - 125,758,879 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 125,793,353 - 125,810,140 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 126,217,036 - 126,243,178 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 126,226,291 - 126,244,538 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 130,067,139 - 130,088,221 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 127,700,123 - 127,716,927 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 5 | 120,154,561 - 120,171,383 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q34 | NCBI | | | | |
|
Ttc22 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955464 | 4,592,667 - 4,610,376 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955464 | 4,592,667 - 4,609,148 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
TTC22 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 1 | 172,028,529 - 172,054,863 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 171,169,465 - 171,195,784 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 54,055,467 - 54,077,523 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 55,645,199 - 55,665,971 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 55,645,199 - 55,665,971 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
TTC22 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 5 | 54,360,767 - 54,379,261 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 54,361,063 - 54,377,022 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 54,429,821 - 54,448,511 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 54,548,827 - 54,567,477 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 54,548,377 - 54,567,472 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 54,545,509 - 54,564,135 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 54,435,645 - 54,454,344 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 54,824,375 - 54,843,053 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Ttc22 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405058 | 68,912,728 - 68,932,523 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936522 | 6,483,839 - 6,504,907 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936522 | 6,484,055 - 6,504,677 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
TTC22 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 6 | 157,556,184 - 157,579,161 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 157,555,204 - 157,579,299 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 145,619,960 - 145,643,045 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
Ttc22 (Heterocephalus glaber - naked mole-rat) |
|
.
Ensembl Acc Id: |
ENSCSAT00000017222 ⟹ ENSCSAP00000016706 |
Type: |
CODING |
Position: |
Green Monkey Assembly | Chr | Position (strand) | Source |
---|
ChlSab1.1 Ensembl | 20 | 78,134,959 - 78,157,897 (+) | Ensembl |
|
RefSeq Acc Id: |
XM_007978625 ⟹ XP_007976816 |
Type: |
CODING |
Position: |
Green Monkey Assembly | Chr | Position (strand) | Source |
---|
ChlSab1.1 | 20 | 78,134,698 - 78,157,092 (+) | NCBI | Vero_WHO_p1.0 | NW_023666033 | 39,124,547 - 39,148,837 (-) | NCBI |
|
Sequence: |
TGAGTCTCAGTTTTCTCCTCTGAGCCTCAGTTTCCTCCCTGCTTAGCAGAGTAAAAACACGCCTTTTGCTTTGCACTGAAGTTTGCACGCCTCGTATTTGACAATGCGCTTGTTTTTCTGGCACACCT GGTTGTGCAATGTCAGCGTCTAGAAGCAGCTGAGCAGCGAAAGCGGAAACACCCATAGGGCACTCCTCGGACCCACCCACCTGCGGGAGGCGCCCTGAGACCGAGAGGCTGCCGGGCCCGGGGCTTCT GCCGGCTGCCCTTCGCCTCCCGCACGGCGCTCGCTCGGGGGACGCCCCCATCCACTGCCCTCCGCAGCCTCAGGCACAAGGGCAAGACCAAGGAAGCAGAGGGGGCAGCCATGGCGGAGCCGGAGGCT GTGGCCGATGACCTAGACGCCCTCATCGACGACCTGGACTACCTGCCGGGCCACTTTCACCTGGAGATGCAGTTGAACTTCGAGCCGCACTCGCCGGCCCCGCAGCGCGCCCGGGACATGAAGCTGCA GCGGGAGGGTCTGCGGCAGGAGCTCGAGCTGGCGGCCGCCCCGCAGCGCCCCGCCGTGCGTCACCTCCTGGGCGCTTTCGCATTCTACCTGGAGGAGCTGGACGAGGCCCGCGAGTGCTTCCTCGAGG TGACCCGCGAGCACCCGGGCAACCTCAACGCCTGGGCCAATCTGGCACACGTGTACGGACGGCTGGGCCAGGAGGAAGAGGAGGAGGCGTGCGCCGCGCGGCTGGCCGGCCTCATGGGCCTGGCGGAG GAGCCCGAAGCCGCCGGGGACCCCCAGCTCCGCGCCGCTCGCTGCCTGGCGGAGCAGGGCTACGCGCACGGCTTCGACGTGGGCTGCGCCAGCCCAGAGGAGCGTGCGCGGGGGCTGGCGGCAGGCAT CGCGCTCTACGACAAGGCGCTGGGCTACGGGCAGCAGATCCCGATGGAGGAGAAAAGGGGCTGGTATTTCACCATGGCAACACTCTACATCAGGCTAGATGGTATCTTCCTGGAGCTGGGCAGTGAGG AGCAGAAGAGGCTGCCCGCCTTCAACCGCACGTTGGCTCTGCTCCGGCAAGTGCTCAAGTCTGAGGACCCCCGCCACCAAGCCCTGGCCTGGTGCTACCTCGGGATGCTGCTGGAGCGGAATGACACC TTCTCCACCACCCCCATGGGCGTCCATGACTGCGGGTACTCGGGGACCGACCCTCTGGACTGCTTCGGCAAGGCCATCGAGATTGCCAAGAACCAACCTCCCATCCTGAATCGCCTGGCCAAAATCTT CTACTTCCTAGGAAAGCAGGATATGGCCATTGGAACCTGCAACATGGCCCTGGATGTCCTACAAGATCCAGAGCTCAACTGGCAGGCGTACTGCACAAGGGCCAAGATCCACATCAGAGCCTACCTGC ACGACCTGGAGCGGGCCAAGATGGGTCTTGGGGGCATGCCTGACAGGAACCACCTGGCCTGCGCCAAGGCTGACCTAGAGGAAGTGGTCAGGGTGTGCCCAGGCTTCAAGGCGTACCTGGACATCGGG CAGGTCTACTACTACATGGGCGTGGACGCAGTGCAGGAGCTGCTGGCGGTGGACGAGGCGGCGCTGAACCAGGCGCTGGTGTTCCTGGCCAAGGCGGGCGAGTCGGAGCTGGGTGCCACGCTGCCCGA GCTGCAGCTGCTGCGCGGCAAGTGCCTGCGCATCAAGGGCGAGGACGCCAACGCGGCGGCCTGCTTCAAGCGCGCGGTGGAGCTGGACGACGCCGGCTCCAGCCACACCGAGGGCTTCGGCTGCCTGC TCGAGGCGCTGCTGGCACAGTGGAGCCAGGCACAGCTGAGCGACGGCGAGCTGGGCCGCGAGGTGGACGCCTGGCTACGCCGCGCCCAGGACAAGTACCCTGCGGCGCGCCTGCGCCAGGAGCTGCAG CGCGTGTGGCGCGGGCACACGGACGAGGTGCTGGGTCTGGCCCGTGCCCTGGTGGCCCAGGGACGGCTGGCGCTGGTGCGGCTGCTCTTTGAGACTATGGAGCGCGAGGGCGAGGGCGCCAGTGCGCC GCGGGACCGCCGGGCGGTCTCCTTCTAGGATGCGGGTGCCCAGGCCGGAGGCTCCCGGGGACCCCGCCCAGGCCCCGCCCAGCTGGTGGGACCAGGTCTGGACGGACCCCCTGCCTTAGGCTGGCCTG GGAGCGGAGCCAGTTCGATTCTCTGTCAGGAATTGTGAATGGGGATGTTGCGACACCCGGGCGGTTTGAAATGCCCACCCAGACTGGAGGGCCTGAGAGCAGAAGAGGCTGGGAGCAGAGGTGAGAAA ACACTGGGAAGCTGCCAATTGAGGGACAGAATTTTCTAGACATACAGGTAAAATAAGATGGTTGTGAGGCTCCTGAGAGAAACAGAAGACAGTTACCTCAGTGTGTCTCTTTTCTAGTCCAGGGGCTC AGTCCCTCAGGCCTGCGTGCCTGTCTTTGGACTCCCGTGGGCTTCACTCTATCCTTATGTGAAAGTCCCCTTTACTTTAGTTGACTAGAGTGGGGTCTCAGCTCCTGCAGCCAGAAAAGCCCTGGCTA AAGCAGAGGGCAAGACTGCAACGCTAGTGAGTTACGGAACAGCGCCCTAGCCTAAGCCTGGTGCTCTGGGCTCATTCCTACCTCTCTGCCACTTTTCCAGCAGGCCTCCTCCTTGGTCAGCGTGGCCT GAAAGGCCTCCCAAACGCTCTGAATAGAGCCCATCAACAGAACATTCACTTGACTTCCCTGCTCTTGGGGGAACTAGGAGCCCCACCCTTTAGGAGGTGCAACCTGCCCCCAGTCTTTTTTTTTTTTT TTTTTTTTTTTTTTTTGAGA
hide sequence
|
RefSeq Acc Id: |
XP_007976816 ⟸ XM_007978625 |
|
Ensembl Acc Id: |
ENSCSAP00000016706 ⟸ ENSCSAT00000017222 |
|
|
|