Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Best4 (bestrophin 4) Rattus norvegicus
Analyze
Symbol: Best4
Name: bestrophin 4
Description: Predicted to have chloride channel activity. Predicted to be involved in chloride transmembrane transport. Predicted to localize to the chloride channel complex. Orthologous to human BEST4 (bestrophin 4); INTERACTS WITH bisphenol A; cyclosporin A (ortholog); dioxygen (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: bestrophin-4; LOC689103; similar to vitelliform macular dystrophy 2-like 2
Orthologs:
Homo sapiens (human) : BEST4 (bestrophin 4)  HGNC  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Best4 (bestrophin 4)
Pan paniscus (bonobo/pygmy chimpanzee) : BEST4 (bestrophin 4)
Canis lupus familiaris (dog) : BEST4 (bestrophin 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Best4 (bestrophin 4)
Sus scrofa (pig) : BEST4 (bestrophin 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05136,013,978 - 136,017,742 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05139,806,969 - 139,810,707 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45137,459,781 - 137,463,519 (+)NCBIRGSC3.4rn4RGSC3.4
Celera5129,144,974 - 129,148,738 (+)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Best4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1596200
Created: 2006-11-20
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.