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ONTOLOGY REPORT - ANNOTATIONS

Term:brain development
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Accession:GO:0007420 term browser browse the term
Definition:The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).


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brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07063281.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Aatk apoptosis-associated tyrosine kinase involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5428170 (PMID:22573681)		 GO_Central
RGD		 PMID:22573681 GO_REF:0000033 NCBI chr10:105,290,752...105,327,219
Ensembl chr10:105,291,585...105,327,112 		JBrowse link
G Abcb6 ATP binding cassette subfamily B member 6 involved_in ISO (PMID:22100072) RGD PMID:22100072 NCBI chr 9:76,668,554...76,677,263
Ensembl chr 9:76,668,554...76,676,924 		JBrowse link
G Abr ABR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:88141 (PMID:11684658) RGD PMID:11684658 NCBI chr10:61,262,516...61,461,331
Ensembl chr10:61,262,516...61,461,505 		JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISO (PMID:15044805) RGD PMID:15044805 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108 		JBrowse link
G Afg2a AFG2 AAA ATPase homolog A involved_in ISO (PMID:26299366) RGD PMID:26299366 NCBI chr 2:120,306,417...120,497,707
Ensembl chr 2:120,306,412...120,497,705 		JBrowse link
G Aim2 absent in melanoma 2 involved_in ISO (PMID:32350463) RGD PMID:32350463 NCBI chr13:85,865,206...85,906,996
Ensembl chr13:85,866,284...85,906,975 		JBrowse link
G Ak7 adenylate kinase 7 acts_upstream_of_or_within ISO MGI:4315923|MGI:5431002 (PMID:18776131), (PMID:21746835) RGD PMID:18776131 PMID:21746835 NCBI chr 6:124,611,789...124,679,978
Ensembl chr 6:124,611,902...124,679,961 		JBrowse link
G Alk ALK receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:5700373 (PMID:17487225) RGD PMID:17487225 NCBI chr 6:22,879,653...23,599,636
Ensembl chr 6:22,880,625...23,598,034 		JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585 		JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:128,391,493...128,394,589
Ensembl chr 7:128,390,412...128,394,695 		JBrowse link
G Amigo3 adhesion molecule with Ig like domain 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:108,741,899...108,743,425
Ensembl chr 8:108,693,060...108,744,555 		JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in ISO (PMID:34942119) RGD PMID:34942119 NCBI chr12:34,131,214...34,160,819
Ensembl chr12:34,133,429...34,160,005 		JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within ISO MGI:1928692 (PMID:9753321) RGD PMID:9753321 NCBI chr 7:25,494,143...25,579,540
Ensembl chr 7:25,494,609...25,579,540 		JBrowse link
G Apod apolipoprotein D involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:69,431,261...69,452,306
Ensembl chr11:69,431,260...69,452,305 		JBrowse link
G Arl6 ADP-ribosylation factor like GTPase 6 acts_upstream_of_or_within ISO MGI:5310744 (PMID:22139371) RGD PMID:22139371 NCBI chr11:40,711,878...40,738,254
Ensembl chr11:40,712,022...40,737,937 		JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:24022475)		 UniProt
RGD		 PMID:24022475 GO_REF:0000024 NCBI chr 1:138,236,235...138,392,868
Ensembl chr 1:138,189,940...138,393,153 		JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO (PMID:20823249) RGD PMID:20823249 NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755 		JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO MGI:104779 (PMID:16687486) RGD PMID:16687486 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983 (PMID:12223565) RGD PMID:12223565 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
G Atxn1 ataxin 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5888926|PMID:28288114)		 UniProt
RGD		 PMID:28288114 GO_REF:0000024 MGI:5888926 NCBI chr17:18,737,491...19,142,360
Ensembl chr17:18,737,533...19,142,360 		JBrowse link
G Atxn1l ataxin 1 like involved_in ISO (MGI:5888926|PMID:28288114) RGD PMID:28288114 MGI:5888926 NCBI chr19:37,700,341...37,711,529
Ensembl chr19:37,700,106...37,711,538 		JBrowse link
G B3glct beta 3-glucosyltransferase acts_upstream_of_or_within ISO (PMID:31600785) RGD PMID:31600785 NCBI chr12:5,255,521...5,346,807
Ensembl chr12:5,255,740...5,346,810 		JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within ISO MGI:3849305 (PMID:19265195) RGD PMID:19265195 NCBI chr 5:131,412,541...131,422,573
Ensembl chr 5:131,412,541...131,421,013 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:3703386|PMID:16287848)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:16287848 GO_REF:0000024 GO_REF:0000107 MGI:3703386 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within ISO MGI:98715 (PMID:22228099) RGD PMID:22228099 NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:107771 (PMID:11684658) RGD PMID:11684658 NCBI chr20:13,469,325...13,596,942
Ensembl chr20:13,471,668...13,597,016 		JBrowse link
G Bglap bone gamma-carboxyglutamate protein involved_in ISO
ISS		 (MGI:5544381|PMID:24074871), (PMID:24074871)
GO_REF:0000024		 RGD
UniProt		 PMID:24074871 GO_REF:0000024 MGI:5544381 NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:1857632 (PMID:7926765) RGD PMID:7926765 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690 		JBrowse link
G Bptf bromodomain PHD finger transcription factor involved_in ISO (PMID:14609955) RGD PMID:14609955 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769 		JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2156556|MGI:2176173 (PMID:17476307)		 Ensembl
RGD		 PMID:17476307 GO_REF:0000107 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5770105|PMID:27042284)		 Ensembl
RGD		 PMID:27042284 GO_REF:0000107 MGI:5770105 NCBI chr 5:82,348,501...82,550,506
Ensembl chr 5:82,348,930...82,493,150 		JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) RGD PMID:19004860 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520 		JBrowse link
G Ccdc141 coiled-coil domain containing 141 involved_in ISO (MGI:6739960|PMID:34298015) RGD PMID:34298015 MGI:6739960 NCBI chr 3:61,948,614...62,109,968
Ensembl chr 3:61,948,646...62,110,079 		JBrowse link
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit acts_upstream_of_or_within ISO MGI:4364215|MGI:5056368 (PMID:29317443) RGD PMID:29317443 NCBI chr 2:116,665,651...116,703,354
Ensembl chr 2:116,665,261...116,703,350 		JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(MGI:1347398|PMID:10545161)		 UniProt
GO_Central
RGD		 PMID:10545161 GO_REF:0000024 GO_REF:0000033 MGI:1347398 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456 		JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344 		JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:4454588|PMID:20460369)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:20460369 GO_REF:0000024 GO_REF:0000107 MGI:4454588 NCBI chr 5:83,792,282...83,961,129
Ensembl chr 5:83,792,284...83,960,782 		JBrowse link
G Cers1 ceramide synthase 1 acts_upstream_of_or_within ISO MGI:2653507 (PMID:15248193) RGD PMID:15248193 NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,104,466...19,112,519 		JBrowse link
G Cfap43 cilia and flagella associated protein 43 acts_upstream_of_or_within ISO (PMID:31004071) RGD PMID:31004071 NCBI chr 1:246,625,259...246,712,438
Ensembl chr 1:246,625,262...246,712,443 		JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:24998929)
MGI:3530648 (PMID:27602517)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:24998929 PMID:27602517 GO_REF:0000033 GO_REF:0000107 NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285 		JBrowse link
G Cic capicua transcriptional repressor involved_in ISO (MGI:5888926|PMID:28288114) RGD PMID:28288114 MGI:5888926 NCBI chr 1:80,853,920...80,880,537
Ensembl chr 1:80,853,920...80,880,532 		JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in ISO (MGI:3693257|PMID:17047318) RGD PMID:17047318 MGI:3693257 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162 		JBrowse link
G Cln5 CLN5, intracellular trafficking protein involved_in ISO (PMID:10992246) RGD PMID:10992246 NCBI chr15:79,893,573...79,903,438
Ensembl chr15:79,893,548...79,903,438 		JBrowse link
G Cntn1 contactin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:123,263,146...123,560,896
Ensembl chr 7:123,372,792...123,558,541 		JBrowse link
G Cntn2 contactin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887 		JBrowse link
G Cntn4 contactin 4 involved_in IEP PMID:8586965 UniProt PMID:8586965 RGD:631992 NCBI chr 4:138,624,584...139,622,499
Ensembl chr 4:139,099,152...139,621,090 		JBrowse link
G Cntn5 contactin 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:6,735,715...7,967,727
Ensembl chr 8:6,738,239...7,967,957 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:16107487) RGD PMID:16107487 NCBI chr16:78,183,533...78,294,412
Ensembl chr16:78,183,533...78,294,412 		JBrowse link
G Ctns cystinosin, lysosomal cystine transporter involved_in ISO (PMID:17471495) RGD PMID:17471495 NCBI chr10:57,801,551...57,817,213
Ensembl chr10:57,801,456...57,817,120 		JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog acts_upstream_of_or_within ISO (PMID:33459505) RGD PMID:33459505 NCBI chr14:34,754,279...34,800,530
Ensembl chr14:34,754,289...34,800,814 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5287328|PMID:21778362)		 UniProt
RGD		 PMID:21778362 GO_REF:0000024 MGI:5287328 NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014 		JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:12183377) RGD PMID:12183377 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1934407 (PMID:12183377)		 GO_Central
RGD		 PMID:12183377 GO_REF:0000033 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883 		JBrowse link
G Dclk1 doublecortin-like kinase 1 acts_upstream_of_or_within ISO MGI:1277171 (PMID:16387638) RGD PMID:16387638 NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956 		JBrowse link
G Dcx doublecortin acts_upstream_of_or_within ISO MGI:1330861 (PMID:16387638) RGD PMID:16387638 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476 		JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 involved_in IMP PMID:21368030 UniProt PMID:21368030 RGD:8554300 NCBI chr20:27,891,989...27,894,088
Ensembl chr20:27,891,998...27,894,105 		JBrowse link
G Dhx37 DEAH-box helicase 37 involved_in ISO (PMID:31256877) RGD PMID:31256877 NCBI chr12:31,194,782...31,214,890
Ensembl chr12:31,194,859...31,216,802 		JBrowse link
G Diaph1 diaphanous-related formin 1 involved_in ISO (MGI:5707577|PMID:24781755) RGD PMID:24781755 MGI:5707577 NCBI chr18:29,669,659...29,769,070
Ensembl chr18:29,669,659...29,769,172 		JBrowse link
G Dmbx1 diencephalon/mesencephalon homeobox 1 involved_in ISO (MGI:3054504|PMID:15314164) RGD PMID:15314164 MGI:3054504 NCBI chr 5:129,394,221...129,403,040
Ensembl chr 5:129,394,221...129,403,040 		JBrowse link
G Dmxl2 Dmx-like 2 acts_upstream_of_or_within ISO MGI:4432280 (PMID:29078390) RGD PMID:29078390 NCBI chr 8:54,741,164...54,884,948
Ensembl chr 8:54,741,160...54,885,161 		JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in ISO (MGI:6245118|PMID:30318146) RGD PMID:30318146 MGI:6245118 NCBI chr12:21,628,319...21,629,398
Ensembl chr12:21,626,450...21,629,408 		JBrowse link
G Dscaml1 DS cell adhesion molecule-like 1 involved_in ISO (PMID:12051741) RGD PMID:12051741 NCBI chr 8:45,740,298...46,057,322
Ensembl chr 8:45,740,298...46,057,320 		JBrowse link
G Eml1 EMAP like 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5574528|PMID:24859200)
(PMID:24859200)		 UniProt
Ensembl
RGD		 PMID:24859200 GO_REF:0000024 GO_REF:0000107 MGI:5574528 NCBI chr 6:127,283,968...127,457,246
Ensembl chr 6:127,284,029...127,457,246 		JBrowse link
G Emx1 empty spiracles homeobox 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1857433|MGI:2136349 (PMID:12091317), (PMID:12561075)		 GO_Central
RGD		 PMID:12091317 PMID:12561075 GO_REF:0000033 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613 		JBrowse link
G Emx2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2136350|MGI:2148858 (PMID:12091317), (PMID:12196586), (PMID:12209834), (PMID:12561075)		 GO_Central
RGD		 PMID:12091317 PMID:12196586 PMID:12209834 PMID:12561075 GO_REF:0000033 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594 		JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:17353897) RGD PMID:17353897 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Epha7 Eph receptor A7 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3582020|PMID:15902206)		 UniProt
Ensembl
RGD		 PMID:15902206 GO_REF:0000024 GO_REF:0000107 MGI:3582020 NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112 		JBrowse link
G Epor erythropoietin receptor acts_upstream_of_or_within ISO MGI:1857575 (PMID:11807041) RGD PMID:11807041 NCBI chr 8:20,489,678...20,494,257
Ensembl chr 8:20,489,678...20,494,257 		JBrowse link
G Esr2 estrogen receptor 2 acts_upstream_of_or_within ISO MGI:2152217 (PMID:12515851) RGD PMID:12515851 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO (PMID:14605369)
MGI:2176173|MGI:2682061 (PMID:14605369)		 RGD PMID:14605369 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:2448986 (PMID:12682014) RGD PMID:12682014 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4834518|MGI:4835411 (PMID:20675713), (PMID:23591631), (PMID:26306834) RGD PMID:20675713 PMID:23591631 PMID:26306834 NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992 		JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) RGD PMID:29360985 NCBI chr 5:68,339,803...68,396,412
Ensembl chr 5:68,340,028...68,396,409 		JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) RGD PMID:32369453 NCBI chr 6:105,408,355...105,472,355
Ensembl chr 6:105,408,339...105,472,353 		JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1856705|MGI:1857869 (PMID:4784576), (PMID:5500588), (PMID:9635428) RGD PMID:4784576 PMID:5500588 PMID:9635428 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Foxj1 forkhead box J1 involved_in ISO
IEA		 (MGI:86662|PMID:9096351)
GO_REF:0000107		 RGD
Ensembl		 PMID:9096351 GO_REF:0000107 MGI:86662 NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237 		JBrowse link
G Foxr1 forkhead box R1 involved_in ISO (MGI:6792271|PMID:34723967) RGD PMID:34723967 MGI:6792271 NCBI chr 8:44,760,587...44,768,696
Ensembl chr 8:44,760,948...44,768,880 		JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (PMID:16168624) RGD PMID:16168624 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961 		JBrowse link
G Gas8 growth arrest specific 8 acts_upstream_of_or_within ISO MGI:3870680|MGI:5803867 (PMID:27472056) RGD PMID:27472056 NCBI chr19:51,552,770...51,572,323
Ensembl chr19:51,552,816...51,572,305 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in IEA
IBA
ISO		 GO_REF:0000002
GO_REF:0000033
GO_REF:0000107
(MGI:6478058|PMID:25792865)		 InterPro
GO_Central
Ensembl
RGD		 PMID:25792865 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 MGI:6478058 NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373 		JBrowse link
G Git2 GIT ArfGAP 2 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr12:41,829,717...41,872,621
Ensembl chr12:41,829,730...41,871,097 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276|MGI:1856282 (PMID:12435361), (PMID:17395647), (PMID:8026071) RGD PMID:8026071 PMID:12435361 PMID:17395647 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gpr158 G protein-coupled receptor 158 involved_in IEA
ISO		 GO_REF:0000107
(PMID:28851741)		 Ensembl
RGD		 PMID:28851741 GO_REF:0000107 NCBI chr17:83,777,625...84,244,428
Ensembl chr17:83,834,569...84,244,428 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4942413 (PMID:21377456)		 GO_Central
RGD		 PMID:21377456 GO_REF:0000033 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:108067 (PMID:12930780) RGD PMID:12930780 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105 		JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:6102914 (PMID:29078390) RGD PMID:29078390 NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3703278|PMID:17331197)		 UniProt
RGD		 PMID:17331197 GO_REF:0000024 MGI:3703278 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO MGI:1931124 (PMID:11291863) RGD PMID:11291863 NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957 		JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO MGI:107160 (PMID:15363417) RGD PMID:15363417 NCBI chr 1:186,319,110...186,326,771
Ensembl chr 1:186,319,110...186,326,771 		JBrowse link
G Hmx3 H6 family homeobox 3 acts_upstream_of_or_within ISO MGI:107159 (PMID:15363417) RGD PMID:15363417 NCBI chr 1:186,313,237...186,315,201
Ensembl chr 1:186,313,063...186,315,201 		JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 involved_in ISO (MGI:3811685|PMID:18669642) RGD PMID:18669642 MGI:3811685 NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017 		JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO MGI:1934892 (PMID:10579729) RGD PMID:10579729 NCBI chr 5:149,677,437...149,778,594
Ensembl chr 5:149,677,476...149,778,594 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2675580 (PMID:16978870) RGD PMID:16978870 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Hydin Hydin, axonemal central pair apparatus protein acts_upstream_of_or_within ISO MGI:1856913|MGI:3801608 (PMID:26234751) RGD PMID:26234751 MGI:71926 NCBI chr19:38,236,996...38,583,271
Ensembl chr19:38,236,464...38,583,264 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO MGI:3505549 (PMID:15469968) RGD PMID:15469968 NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470 		JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr18:70,474,978...70,486,062 JBrowse link
G Ier3ip1-ps1 immediate early response 3 interacting protein 1, pseudogene 1 involved_in ISO (PMID:33122427) RGD PMID:33122427 NCBI chr 4:132,342,131...132,342,625
Ensembl chr 4:132,332,180...132,342,316 		JBrowse link
G Ift172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3829198 (PMID:18930042)		 Ensembl
RGD		 PMID:18930042 GO_REF:0000107 NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:1918742|MGI:3823090 (PMID:19036983), (PMID:22228099) RGD PMID:19036983 PMID:22228099 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Igf1r insulin-like growth factor 1 receptor acts_upstream_of_or_within ISO MGI:1926486 (PMID:12904469) RGD PMID:12904469 NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777 		JBrowse link
G Immp2l inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO MGI:3765965 (PMID:21824519) RGD PMID:21824519 NCBI chr 6:58,070,035...58,970,165
Ensembl chr 6:58,070,283...58,969,840 		JBrowse link
G Irs2 insulin receptor substrate 2 acts_upstream_of_or_within ISO MGI:2158686 (PMID:12904469) RGD PMID:12904469 NCBI chr16:78,488,249...78,512,482
Ensembl chr16:78,485,045...78,512,482 		JBrowse link
G Jhy junctional cadherin complex regulator involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5437647 (PMID:23906841)		 GO_Central
RGD		 PMID:23906841 GO_REF:0000033 NCBI chr 8:41,276,501...41,333,383
Ensembl chr 8:41,276,491...41,333,514 		JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISO (MGI:5297001|PMID:21966978) RGD PMID:21966978 MGI:5297001 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682 		JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:30382937) RGD PMID:30382937 NCBI chr 3:168,194,776...168,253,831
Ensembl chr 3:168,195,357...168,275,071 		JBrowse link
G Kdm4b lysine demethylase 4B involved_in ISO (MGI:6101669|PMID:27023172) RGD PMID:27023172 MGI:6101669 NCBI chr 9:1,158,737...1,237,233
Ensembl chr 9:1,158,752...1,236,543 		JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within ISO MGI:4364527 (PMID:29078390) RGD PMID:29078390 NCBI chr13:47,576,129...47,626,112
Ensembl chr13:47,576,160...47,626,127 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:1856965 (PMID:26306834), (PMID:29360985) RGD PMID:26306834 PMID:29360985 NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930 		JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO MGI:1890208 (PMID:14566948), (PMID:15295034) RGD PMID:14566948 PMID:15295034 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908 		JBrowse link
G Lmtk3 lemur tyrosine kinase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:96,261,058...96,280,362
Ensembl chr 1:96,260,977...96,280,672 		JBrowse link
G Maco1 macoilin 1 involved_in ISO (MGI:3052424|PMID:15255972) RGD PMID:15255972 MGI:3052424 NCBI chr 5:147,012,416...147,075,265
Ensembl chr 5:147,012,867...147,075,001 		JBrowse link
G Macrod2 mono-ADP ribosylhydrolase 2 involved_in ISO (MGI:4887328|PMID:17586838) RGD PMID:17586838 MGI:4887328 NCBI chr 3:127,720,066...129,737,511
Ensembl chr 3:127,720,181...129,734,492 		JBrowse link
G Macroh2a2 macroH2A.2 histone involved_in ISO (PMID:19734898) RGD PMID:19734898 NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891 		JBrowse link
G Map1s microtubule-associated protein 1S involved_in IEA
ISO		 GO_REF:0000107
(MGI:3529608|PMID:15528209)		 Ensembl
RGD		 PMID:15528209 GO_REF:0000107 MGI:3529608 NCBI chr16:18,516,759...18,527,777
Ensembl chr16:18,517,574...18,527,988 		JBrowse link
G MAST1 microtubule associated serine/threonine kinase 1 involved_in ISO
IEA		 (PMID:30449657)
GO_REF:0000107
(MGI:6269299|PMID:30449657)		 RGD
Ensembl		 PMID:30449657 GO_REF:0000107 MGI:6269299 NCBI chr19:23,216,418...23,244,224
Ensembl chr19:23,207,991...23,244,235 		JBrowse link
G Matcap1 microtubule associated tyrosine carboxypeptidase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:7285999|PMID:35482892)		 UniProt
Ensembl
RGD		 PMID:35482892 GO_REF:0000024 GO_REF:0000107 MGI:7285999 NCBI chr19:33,158,053...33,166,784
Ensembl chr19:33,158,056...33,166,445 		JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IEP PMID:15019943 HGNC-UCL PMID:15019943 RGD:8554528 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471 		JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO MGI:2158354 (PMID:18571096) RGD PMID:18571096 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:1861125 (PMID:10882104) RGD PMID:10882104 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Meis1 Meis homeobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:93,155,426...93,294,373
Ensembl chr14:93,155,419...93,294,265 		JBrowse link
G Meis2 Meis homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:102,742,904...102,944,833
Ensembl chr 3:102,742,900...102,949,696 		JBrowse link
G Meis3 Meis homeobox 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:76,861,267...76,872,691
Ensembl chr 1:76,861,924...76,872,691 		JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:2450967 (PMID:12397180) RGD PMID:12397180 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within ISO (PMID:26005865), (PMID:26005868)
(MGI:6196220|PMID:30074985)		 RGD PMID:26005865 PMID:26005868 PMID:30074985 MGI:6196220 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690 		JBrowse link
G Mink1 misshapen-like kinase 1 involved_in ISO (MGI:1354211|PMID:10708748) RGD PMID:10708748 MGI:1354211 NCBI chr10:55,278,293...55,330,782
Ensembl chr10:55,278,391...55,330,782 		JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:3664764|MGI:3664765 (PMID:16481398) RGD PMID:16481398 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165 		JBrowse link
G Napa NSF attachment protein alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856610 (PMID:11706940)		 Ensembl
RGD		 PMID:11706940 GO_REF:0000107 NCBI chr 1:76,787,036...76,805,869
Ensembl chr 1:76,786,932...76,805,869 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO MGI:2450859 (PMID:12556486) RGD PMID:12556486 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268 		JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:14765537)
MGI:3793713 (PMID:28916769)
GO_REF:0000107		 RGD
Ensembl		 PMID:14765537 PMID:28916769 GO_REF:0000107 NCBI chr 2:45,951,327...46,061,829
Ensembl chr 2:45,951,313...46,061,846 		JBrowse link
G Negr1 neuronal growth regulator 1 acts_upstream_of_or_within ISO MGI:5447397 (PMID:30932003) RGD PMID:30932003 NCBI chr 2:245,624,460...246,359,605
Ensembl chr 2:245,624,435...246,356,730 		JBrowse link
G Nes nestin involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:173,437,867...173,447,777
Ensembl chr 2:173,438,734...173,447,777 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857478 (PMID:10419687)		 HGNC-UCL
RGD		 PMID:10419687 GO_REF:0000024 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within ISO (PMID:23863479) RGD PMID:23863479 NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667 		JBrowse link
G Nfasc neurofascin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:43,997,223...44,183,863
Ensembl chr13:43,997,224...44,183,880 		JBrowse link
G Nfib nuclear factor I/B involved_in ISO (PMID:30388402) RGD PMID:30388402 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479 		JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3714028|MGI:3802571 (PMID:17353270), (PMID:18477394), (PMID:23964093) RGD PMID:17353270 PMID:18477394 PMID:23964093 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO
IBA		 (PMID:8291537)
GO_REF:0000033		 RGD
GO_Central		 PMID:8291537 GO_REF:0000033 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:11971878)
MGI:1857494|MGI:95843 (PMID:12930780), (PMID:8557195)		 RGD PMID:8557195 PMID:11971878 PMID:12930780 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Nme7 NME/NM23 family member 7 acts_upstream_of_or_within ISO MGI:4151115 (PMID:21746835) RGD PMID:21746835 NCBI chr13:76,657,303...76,786,768
Ensembl chr13:76,657,367...76,786,765 		JBrowse link
G Nnat neuronatin involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:146,225,941...146,228,868
Ensembl chr 3:146,226,407...146,228,834 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (PMID:11311163) RGD PMID:11311163 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Nog noggin acts_upstream_of_or_within ISO MGI:1862000 (PMID:12397106) RGD PMID:12397106 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176490 (PMID:14994267) RGD PMID:14994267 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Ntf3 neurotrophin 3 acts_upstream_of_or_within ISO MGI:1861706 (PMID:10195193) RGD PMID:10195193 NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596 		JBrowse link
G Obox2 oocyte specific homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,191,238...68,199,383
Ensembl chr 1:68,197,886...68,199,095 		JBrowse link
G Obox2l2 oocyte specific homeobox 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,216,812...68,219,145
Ensembl chr 1:68,217,649...68,219,076 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 acts_upstream_of_or_within ISO MGI:5548687 (PMID:31383820) RGD PMID:31383820 NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499 		JBrowse link
G Odad4 outer dynein arm docking complex subunit 4 acts_upstream_of
acts_upstream_of_or_within		 ISO MGI:6110171 (PMID:27486780) RGD PMID:27486780 NCBI chr10:85,480,089...85,508,603
Ensembl chr10:85,480,094...85,508,603 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856155 (PMID:10409504), (PMID:12196586) RGD PMID:10409504 PMID:12196586 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Pbx1 PBX homeobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594 		JBrowse link
G Pbx2 PBX homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,151,500...4,156,425
Ensembl chr20:4,151,500...4,156,425 		JBrowse link
G Pbx3 PBX homeobox 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:17,488,691...17,682,412
Ensembl chr 3:17,488,693...17,682,791 		JBrowse link
G Pbx4 PBX homeobox 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:19,555,089...19,590,054
Ensembl chr16:19,555,090...19,590,014 		JBrowse link
G Pcdh18 protocadherin 18 involved_in ISO (MGI:2154581|PMID:11716507) RGD PMID:11716507 MGI:2154581 NCBI chr 2:133,831,996...133,845,992
Ensembl chr 2:133,832,001...133,845,883 		JBrowse link
G Plxnb2 plexin B2 involved_in ISO (MGI:3712712|PMID:17554007) RGD PMID:17554007 MGI:3712712 NCBI chr 7:120,232,276...120,258,385
Ensembl chr 7:120,232,331...120,258,330 		JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) acts_upstream_of_or_within ISO MGI:5052171 (PMID:26306834) RGD PMID:26306834 NCBI chr 5:129,634,274...129,644,150
Ensembl chr 5:129,634,294...129,644,149 		JBrowse link
G Pomk protein-O-mannose kinase acts_upstream_of_or_within ISO MGI:4247868 (PMID:21746835) RGD PMID:21746835 NCBI chr16:66,085,569...66,101,360
Ensembl chr16:66,088,000...66,098,388 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISS
ISO		 PMID:8895569
(PMID:7637805)		 RGD PMID:7637805 PMID:8895569 RGD:8553248 NCBI chr 5:135,121,164...135,142,048
Ensembl chr 5:135,121,163...135,142,048 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:107202 (PMID:16687486) RGD PMID:16687486 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:8812486) RGD PMID:8812486 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1930934 (PMID:9153393) RGD PMID:9153393 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Ptch1 patched 1 involved_in ISO (MGI:5142377|PMID:11517919) RGD PMID:11517919 MGI:5142377 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in ISO (PMID:11704759) RGD PMID:11704759 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925 		JBrowse link
G Pygo2 pygopus family PHD finger 2 acts_upstream_of_or_within ISO MGI:3712856 (PMID:17425782) RGD PMID:17425782 NCBI chr 2:174,849,670...174,854,758
Ensembl chr 2:174,849,936...174,854,758 		JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 involved_in ISO
IEA		 (PMID:24656866)
GO_REF:0000107		 RGD
Ensembl		 PMID:24656866 GO_REF:0000107 NCBI chr 8:109,207,705...109,215,738
Ensembl chr 8:109,207,705...109,215,739 		JBrowse link
G Rab18 RAB18, member RAS oncogene family involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr17:54,944,099...54,976,093
Ensembl chr17:54,943,955...54,976,043 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (PMID:20512159) RGD PMID:20512159 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169 		JBrowse link
G Rax retina and anterior neural fold homeobox acts_upstream_of_or_within ISO MGI:2152531 (PMID:15789424) RGD PMID:15789424 NCBI chr18:59,463,347...59,467,469
Ensembl chr18:59,463,737...59,467,431 		JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1856398 (PMID:12223565)		 UniProt
RGD		 PMID:12223565 GO_REF:0000024 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:10197527) RGD PMID:10197527 NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536 		JBrowse link
G Rogdi rogdi atypical leucine zipper involved_in
acts_upstream_of_or_within		 ISO (PMID:25565929)
(PMID:38172607)		 RGD PMID:25565929 PMID:38172607 NCBI chr10:10,567,834...10,572,453
Ensembl chr10:10,567,834...10,572,452 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17553904), (PMID:17558409) RGD PMID:17553904 PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Rtn1 reticulon 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:90,763,212...90,983,436
Ensembl chr 6:90,763,216...90,983,436 		JBrowse link
G Rtn3 reticulon 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:204,612,675...204,669,212
Ensembl chr 1:204,612,675...204,669,275 		JBrowse link
G Rtn4 reticulon 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686 		JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 acts_upstream_of_or_within ISO MGI:2158346 (PMID:16314531) RGD PMID:16314531 NCBI chr 2:203,624,752...203,629,110
Ensembl chr 2:203,621,587...203,629,681 		JBrowse link
G Sct secretin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658 		JBrowse link
G Scyl2 SCY1 like pseudokinase 2 involved_in ISO (MGI:5694521|PMID:26203146) RGD PMID:26203146 MGI:5694521 NCBI chr 7:24,064,404...24,117,338
Ensembl chr 7:24,064,404...24,117,305 		JBrowse link
G Selenop selenoprotein P involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2656912 (PMID:14704310)		 Ensembl
RGD		 PMID:14704310 GO_REF:0000107 NCBI chr 2:52,498,123...52,508,409
Ensembl chr 2:52,498,339...52,508,852 		JBrowse link
G Septin4 septin 4 acts_upstream_of_or_within ISO MGI:3574373 (PMID:16314519) RGD PMID:16314519 NCBI chr10:72,366,729...72,390,764
Ensembl chr10:72,366,873...72,390,768 		JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase involved_in ISO (PMID:31197650)
(MGI:6467717|PMID:31197650)		 RGD PMID:31197650 MGI:6467717 NCBI chr 1:182,386,197...182,411,695
Ensembl chr 1:182,388,060...182,411,090 		JBrowse link
G Shroom4 shroom family member 4 involved_in ISO (PMID:16249884) RGD PMID:16249884 NCBI chr  X:15,869,065...16,076,850
Ensembl chr  X:15,869,065...16,076,869 		JBrowse link
G Six3 SIX homeobox 3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2450901 (PMID:12569128)		 GO_Central
RGD		 PMID:12569128 GO_REF:0000033 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO (PMID:28886095) RGD PMID:28886095 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402 		JBrowse link
G Slc23a1 solute carrier family 23 member 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:2178849|PMID:11984597)		 UniProt
Ensembl
RGD		 PMID:11984597 GO_REF:0000024 GO_REF:0000107 MGI:2178849 NCBI chr18:27,214,940...27,230,564
Ensembl chr18:27,216,281...27,230,697 		JBrowse link
G Slc6a17 solute carrier family 6 member 17 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5634854|PMID:25704603)		 UniProt
RGD		 PMID:25704603 GO_REF:0000024 MGI:5634854 NCBI chr 2:195,107,434...195,155,697
Ensembl chr 2:195,107,438...195,155,697 		JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:1857061 (PMID:17035536) RGD PMID:17035536 NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536 		JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:14609955)
MGI:5427348 (PMID:22516202)		 RGD PMID:14609955 PMID:22516202 NCBI chr  X:126,980,201...127,066,385
Ensembl chr  X:126,994,947...127,066,347 		JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5775676|PMID:27018474)		 UniProt
Ensembl
RGD		 PMID:27018474 GO_REF:0000024 GO_REF:0000107 MGI:5775676 NCBI chr 1:79,988,540...80,011,262
Ensembl chr 1:79,988,612...80,011,254 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
G Sox12 SRY-box transcription factor 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:140,859,499...140,860,518
Ensembl chr 3:140,856,579...140,860,975 		JBrowse link
G Sox14 SRY-box transcription factor 14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:100,421,982...100,423,918
Ensembl chr 8:100,421,982...100,423,918 		JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:32442410)		 UniProt
Ensembl
RGD		 PMID:32442410 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386 		JBrowse link
G Sphk1 sphingosine kinase 1 acts_upstream_of_or_within ISO MGI:1861380 (PMID:16314531) RGD PMID:16314531 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240 		JBrowse link
G Sphk2 sphingosine kinase 2 acts_upstream_of_or_within ISO MGI:1316649 (PMID:16314531) RGD PMID:16314531 NCBI chr 1:96,180,872...96,188,592
Ensembl chr 1:96,180,887...96,188,391 		JBrowse link
G Sry sex determining region Y involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  Y:441,525...442,037 JBrowse link
G Stk36 serine/threonine kinase 36 acts_upstream_of_or_within ISO MGI:5429196 (PMID:21746835) RGD PMID:21746835 NCBI chr 9:76,176,922...76,204,423
Ensembl chr 9:76,176,920...76,204,422 		JBrowse link
G Stxbp3 syntaxin binding protein 3 acts_upstream_of_or_within ISO MGI:3528591 (PMID:15690082) RGD PMID:15690082 NCBI chr 2:196,442,738...196,485,733
Ensembl chr 2:196,442,634...196,485,671 		JBrowse link
G Svbp small vasohibin binding protein involved_in ISO (MGI:7285999|PMID:35482892), (MGI:7287852|PMID:31363758) RGD PMID:31363758 PMID:35482892 MGI:7285999 MGI:7287852 NCBI chr 5:132,808,021...132,813,735
Ensembl chr 5:132,808,204...132,813,735 		JBrowse link
G Tbc1d23 TBC1 domain family, member 23 involved_in ISO (PMID:28823706), (PMID:28823707) RGD PMID:28823706 PMID:28823707 NCBI chr11:43,303,355...43,361,507
Ensembl chr11:43,303,355...43,361,503 		JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in ISO
IEA		 (MGI:2678274|PMID:12975342)
GO_REF:0000107		 RGD
Ensembl		 PMID:12975342 GO_REF:0000107 MGI:2678274 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228 		JBrowse link
G Tmx2 thioredoxin-related transmembrane protein 2 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:31735293)		 UniProt
GO_Central
RGD		 PMID:31735293 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:69,754,937...69,762,587
Ensembl chr 3:69,754,939...69,762,587 		JBrowse link
G Tubgcp2 tubulin gamma complex component 2 involved_in ISO (PMID:31630790) RGD PMID:31630790 NCBI chr 1:194,791,113...194,817,807
Ensembl chr 1:194,792,142...194,817,619 		JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO MGI:2388066 (PMID:11406614), (PMID:19286674) RGD PMID:11406614 PMID:19286674 NCBI chr 4:161,590,478...161,632,244
Ensembl chr 4:161,590,479...161,632,149 		JBrowse link
G Ufc1 ubiquitin-fold modifier conjugating enzyme 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29868776)		 UniProt
RGD		 PMID:29868776 GO_REF:0000024 NCBI chr13:83,709,329...83,719,762
Ensembl chr13:83,709,330...83,716,076 		JBrowse link
G Ufm1 ubiquitin-fold modifier 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:29868776)		 UniProt
RGD		 PMID:29868776 GO_REF:0000024 NCBI chr 2:137,969,476...137,977,620
Ensembl chr 2:137,966,678...137,978,089
Ensembl chr 2:137,966,678...137,978,089 		JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in ISO (PMID:31820119) RGD PMID:31820119 NCBI chr14:95,456,330...95,497,483
Ensembl chr14:95,456,330...95,496,830 		JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO MGI:4362969 (PMID:27445138) RGD PMID:27445138 NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924 		JBrowse link
G Unc5c unc-5 netrin receptor C involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857013|MGI:1857852 (PMID:10818148), (PMID:1401878), (PMID:9126743), (PMID:9550145)		 Ensembl
RGD		 PMID:1401878 PMID:9126743 PMID:9550145 PMID:10818148 GO_REF:0000107 NCBI chr 2:230,180,353...230,535,219
Ensembl chr 2:230,180,951...230,535,217 		JBrowse link
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay acts_upstream_of ISO (PMID:23821644) RGD PMID:23821644 NCBI chr  X:116,335,308...116,353,332
Ensembl chr  X:116,335,308...116,353,236 		JBrowse link
G Utp3 UTP3, small subunit processome component involved_in ISS
ISO		 GO_REF:0000024
(MGI:2136064|PMID:11404095)		 UniProt
RGD		 PMID:11404095 GO_REF:0000024 MGI:2136064 NCBI chr14:19,515,716...19,517,370
Ensembl chr14:19,515,669...19,517,396 		JBrowse link
G Vax1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1859863|MGI:1859922 (PMID:10601035), (PMID:10601036)		 GO_Central
RGD		 PMID:10601035 PMID:10601036 GO_REF:0000033 NCBI chr 1:258,324,571...258,342,396
Ensembl chr 1:258,326,276...258,330,192 		JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:116,195,528...116,219,597
Ensembl chr 4:116,195,528...116,219,594 		JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B acts_upstream_of_or_within ISO (PMID:37573958) RGD PMID:37573958 NCBI chr 7:66,557,862...67,128,429
Ensembl chr 7:66,558,471...67,128,429 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065|MGI:6102912 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739 		JBrowse link
G Zfp335 zinc finger protein 335 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(MGI:5468205|PMID:23178126)
(PMID:23178126)		 UniProt
GO_Central
RGD		 PMID:23178126 GO_REF:0000024 GO_REF:0000033 MGI:5468205 NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054 		JBrowse link
G Zic1 Zic family member 1 involved_in ISO (PMID:8542595)
(MGI:78770|PMID:7931345)		 RGD PMID:7931345 PMID:8542595 MGI:78770 NCBI chr 8:91,908,548...91,918,020
Ensembl chr 8:91,908,576...91,912,731 		JBrowse link
abducens nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:3720850 (PMID:21533046)		 Ensembl
RGD		 PMID:21533046 GO_REF:0000107 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236 		JBrowse link
adenohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:3576789 (PMID:9140068) RGD PMID:9140068 NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
G Ghrh growth hormone releasing hormone acts_upstream_of_or_within TAS
ISO		 MGI:3051561 (PMID:15985453) RGD PMID:15985453 PMID:12511850 RGD:1601329 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889 		JBrowse link
G Ghrhr growth hormone releasing hormone receptor acts_upstream_of_or_within ISO MGI:1856425 (PMID:1270792), (PMID:1329576), (PMID:1504465) RGD PMID:1270792 PMID:1329576 PMID:1504465 NCBI chr 4:84,498,159...84,532,851
Ensembl chr 4:84,500,212...84,532,776 		JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within ISO MGI:2154448 (PMID:8631293) RGD PMID:8631293 NCBI chr12:7,880,663...7,882,947
Ensembl chr12:7,881,460...7,882,753 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3808031 (PMID:18996108)		 Ensembl
RGD		 PMID:18996108 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 IMP RGD PMID:16216912 RGD:1601440 NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801 		JBrowse link
G Prop1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO (PMID:18996108) RGD PMID:18996108 NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434 		JBrowse link
G Slc6a3 solute carrier family 6 member 3 acts_upstream_of_or_within ISO MGI:2386303 (PMID:9247269) RGD PMID:9247269 NCBI chr 1:29,709,443...29,750,413
Ensembl chr 1:29,709,443...29,750,413 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within IEP
ISO		 MGI:2449045 (PMID:16932809) RGD PMID:16932809 PMID:21815952 RGD:8661681 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
adenohypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3712359 (PMID:17440044)		 Ensembl
RGD		 PMID:17440044 GO_REF:0000107 NCBI chr 3:109,223,809...109,247,023
Ensembl chr 3:109,226,924...109,245,902 		JBrowse link
ammon gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp8 LDL receptor related protein 8 involved_in ISO (MGI:3821675|PMID:18778775) RGD PMID:18778775 MGI:3821675 NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352 		JBrowse link
amygdala development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO (MGI:2664023|PMID:12805306) RGD PMID:12805306 MGI:2664023 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544 		JBrowse link
G Esr2 estrogen receptor 2 IEP RGD PMID:22791648 RGD:8694158 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1339975 (PMID:25242307)		 Ensembl
RGD		 PMID:25242307 GO_REF:0000107 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350 (PMID:12527005) RGD PMID:12527005 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 acts_upstream_of_or_within ISO MGI:97306 (PMID:25242307) RGD PMID:25242307 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383 		JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO MGI:2179766 (PMID:24441682) RGD PMID:24441682 NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041 		JBrowse link
G Uba6 ubiquitin-like modifier activating enzyme 6 acts_upstream_of_or_within ISO MGI:2176173|MGI:5509054 (PMID:23499007) RGD PMID:23499007 NCBI chr14:21,884,039...21,947,857
Ensembl chr14:21,884,039...21,947,857 		JBrowse link
anterior commissure morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:4440742 (PMID:22284184) RGD PMID:22284184 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510 		JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in ISO (MGI:5467661|PMID:23206892) RGD PMID:23206892 MGI:5467661 NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483 		JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3849742 (PMID:19398581)		 Ensembl
RGD		 PMID:19398581 GO_REF:0000107 NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800 		JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO		 GO_REF:0000024
(MGI:4453290|PMID:19961580)		 UniProt
RGD		 PMID:19961580 GO_REF:0000024 MGI:4453290 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2176490 (PMID:11997145) RGD PMID:11997145 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Plxna4 plexin A4 acts_upstream_of_or_within ISO MGI:3578655 (PMID:15814794) RGD PMID:15814794 NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:4867728 (PMID:21055390)
(MGI:5467661|PMID:23206892)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21055390 PMID:23206892 GO_REF:0000024 GO_REF:0000107 MGI:5467661 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065|MGI:6102912 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739 		JBrowse link
brain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO MGI:95387 (PMID:25100583) RGD PMID:25100583 NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216 		JBrowse link
G Akt3 AKT serine/threonine kinase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3574346 (PMID:15713641)		 Ensembl
RGD		 PMID:15713641 GO_REF:0000107 NCBI chr13:88,943,708...89,225,831
Ensembl chr13:88,946,091...89,225,708 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (PMID:18032602) RGD PMID:18032602 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:18032602) RGD PMID:18032602 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:18032602) RGD PMID:18032602 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Cdh2 cadherin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:95387 (PMID:25100583)		 Ensembl
RGD		 PMID:25100583 GO_REF:0000107 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167 		JBrowse link
G Ctnna2 catenin alpha 2 involved_in ISO (MGI:2181860|PMID:12089526), (MGI:3654578|PMID:16691566) RGD PMID:12089526 PMID:16691566 MGI:2181860 MGI:3654578 NCBI chr 4:109,294,249...110,443,409
Ensembl chr 4:109,293,978...110,443,522 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:1314653|MGI:2682313|MGI:88355 (PMID:23178126), (PMID:25100583) RGD PMID:23178126 PMID:25100583 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613 		JBrowse link
G Fancc FA complementation group C involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1890081 (PMID:24483844)		 Ensembl
RGD		 PMID:24483844 GO_REF:0000107 NCBI chr17:1,680,660...1,822,610
Ensembl chr17:1,681,324...1,829,376 		JBrowse link
G Fancd2 FA complementation group D2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1890081 (PMID:24483844)		 Ensembl
RGD		 PMID:24483844 GO_REF:0000107 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:17,232,735...17,330,574
Ensembl chr10:17,227,181...17,330,571 		JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO MGI:2448480|MGI:95480 (PMID:24483844) RGD PMID:24483844 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) RGD PMID:17954912 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Mir124-1 microRNA 124-1 acts_upstream_of_or_within ISO MGI:5307015|MGI:5307017 (PMID:21857657) RGD PMID:21857657 NCBI chr15:38,842,014...38,842,098
Ensembl chr15:38,842,014...38,842,098 		JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (PMID:18032602) RGD PMID:18032602 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (PMID:30503862) RGD PMID:30503862 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO
IBA		 (PMID:9063735)
GO_REF:0000033		 RGD
GO_Central		 PMID:9063735 GO_REF:0000033 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:84247|PMID:8951055)		 UniProt
RGD		 PMID:8951055 GO_REF:0000024 MGI:84247 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (PMID:20096683) RGD PMID:20096683 NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284 (PMID:17614943) RGD PMID:17614943 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1202717 (PMID:17614943) RGD PMID:17614943 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3832995|PMID:19208814) RGD PMID:19208814 MGI:3832995 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:4948759|PMID:21423165)
GO_REF:0000107		 BHF-UCL
RGD
Ensembl		 PMID:21423165 GO_REF:0000024 GO_REF:0000107 MGI:4948759 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3774019 (PMID:18165320)		 Ensembl
RGD		 PMID:18165320 GO_REF:0000107 NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268 		JBrowse link
G Slc6a4 solute carrier family 6 member 4 involved_in ISO (MGI:3832995|PMID:19208814) RGD PMID:19208814 MGI:3832995 NCBI chr10:61,824,208...61,858,924
Ensembl chr10:61,826,123...61,858,384 		JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within ISO MGI:5295267 (PMID:21715716) RGD PMID:21715716 NCBI chr 2:58,512,489...58,694,718
Ensembl chr 2:58,512,489...58,694,664 		JBrowse link
G Vps51 VPS51 subunit of GARP complex involved_in ISO (PMID:30624672), (PMID:31207318) RGD PMID:30624672 PMID:31207318 NCBI chr 1:203,360,434...203,370,422
Ensembl chr 1:203,360,440...203,370,430 		JBrowse link
G Zfp335 zinc finger protein 335 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5470136|MGI:95387 (PMID:23178126)		 Ensembl
RGD		 PMID:23178126 GO_REF:0000107 NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054 		JBrowse link
brain segmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (PMID:7903221) RGD PMID:7903221 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857626 (PMID:9367425)		 Ensembl
RGD		 PMID:9367425 GO_REF:0000107 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:1856419 (PMID:7925021) RGD PMID:7925021 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031 		JBrowse link
Cajal-Retzius cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:104876 (PMID:18579678)		 Ensembl
RGD		 PMID:18579678 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Neurog2 neurogenin 2 acts_upstream_of ISO (PMID:18579678) RGD PMID:18579678 NCBI chr 2:216,092,709...216,095,276
Ensembl chr 2:216,093,363...216,094,154 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:2149116 (PMID:15548218) RGD PMID:15548218 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
caudate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in ISO
IEA		 (PMID:11872605)
GO_REF:0000107		 RGD
Ensembl		 PMID:11872605 GO_REF:0000107 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683 		JBrowse link
cell differentiation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO MGI:1347476|MGI:2176222|MGI:2177337 (PMID:17922007) RGD PMID:17922007 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:1857743 (PMID:10357893) RGD PMID:10357893 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Nog noggin involved_in ISO
IEA		 (PMID:8582276)
GO_REF:0000107		 RGD
Ensembl		 PMID:8582276 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO MGI:1926861 (PMID:17922007) RGD PMID:17922007 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978 		JBrowse link
cell migration in diencephalon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in ISO (MGI:4887555|PMID:19046377) RGD PMID:19046377 MGI:4887555 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781 		JBrowse link
cell migration in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix loop helix 2 acts_upstream_of_or_within ISO UniProtKB:Q02576 (MGI:3723363|PMID:17573818) RGD PMID:17573818 MGI:3723363 NCBI chr 2:189,444,287...189,449,625
Ensembl chr 2:189,442,711...189,449,625 		JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3512302 (PMID:8955272)		 Ensembl
RGD		 PMID:8955272 GO_REF:0000107 NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728 		JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) RGD PMID:21122816 MGI:4881530 NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128 		JBrowse link
cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of ISO (PMID:25099998) RGD PMID:25099998 NCBI chr10:1,779,834...1,946,586
Ensembl chr10:1,779,835...1,946,575 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5463669|PMID:23056358)		 UniProt
Ensembl
RGD		 PMID:23056358 GO_REF:0000024 GO_REF:0000107 MGI:5463669 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280 		JBrowse link
cell proliferation in external granule layer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:10970885) RGD PMID:10970885 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2429693 (PMID:15677725)		 Ensembl
RGD		 PMID:15677725 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142 		JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778 		JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858 (PMID:10729342) RGD PMID:10729342 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594 		JBrowse link
G Fabp7 fatty acid binding protein 7 acts_upstream_of_or_within ISO MGI:3665437 (PMID:18001149) RGD PMID:18001149 NCBI chr20:37,123,193...37,126,725
Ensembl chr20:37,123,193...37,126,880 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (PMID:16613831) RGD PMID:16613831 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO MGI:2386412 (PMID:18957199) RGD PMID:18957199 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164 		JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:2152620 (PMID:10325223) RGD PMID:10325223 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within ISO MGI:3765904 (PMID:17928865) RGD PMID:17928865 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319 		JBrowse link
G Nfib nuclear factor I/B involved_in ISO MGI:5052268 (PMID:27965439) RGD PMID:27965439 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479 		JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3802570 (PMID:27965439) RGD PMID:27965439 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Ngf nerve growth factor IMP RGD PMID:29409115 RGD:402463967 NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452 		JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 IEP RGD PMID:12834878 RGD:5133694 NCBI chr 1:156,823,960...156,848,262
Ensembl chr 1:156,823,960...156,848,261 		JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (MGI:3813369|PMID:18694563) RGD PMID:18694563 MGI:3813369 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2667422|PMID:12843296) RGD PMID:12843296 MGI:2667422 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:12843296) RGD PMID:12843296 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Wnt7b Wnt family member 7B involved_in ISO (MGI:2667422|PMID:12843296) RGD PMID:12843296 MGI:2667422 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2684610 (PMID:17644613) RGD PMID:17644613 NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157 		JBrowse link
cell proliferation in hindbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C5ar1 complement C5a receptor 1 IMP RGD PMID:18635264 RGD:5129699 NCBI chr 1:76,948,622...76,959,826 JBrowse link
cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO MGI:108474 (PMID:19842188) RGD PMID:19842188 NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369 		JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO MGI:108476 (PMID:19842188) RGD PMID:19842188 NCBI chr 7:70,055,012...70,086,781
Ensembl chr 7:70,055,068...70,086,776 		JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (MGI:2679774|PMID:14557550), (MGI:3045659|PMID:15121182) RGD PMID:14557550 PMID:15121182 MGI:2679774 MGI:3045659 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
G Wnt2 Wnt family member 2 involved_in ISO (PMID:20018874)
(MGI:4461115|PMID:20018874)		 RGD PMID:20018874 MGI:4461115 NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402 		JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2679774|PMID:14557550) RGD PMID:14557550 MGI:2679774 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856801 (PMID:15091337)		 Ensembl
RGD		 PMID:15091337 GO_REF:0000107 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552 		JBrowse link
cerebellar cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr2 angiotensin II receptor, type 2 IMP RGD PMID:19682991 RGD:6903898 NCBI chr  X:112,119,876...112,124,060
Ensembl chr  X:112,120,228...112,124,057 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (PMID:8855328) RGD PMID:8855328 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 involved_in ISO
ISS		 (PMID:24766809), (PMID:24766810)
(MGI:5568133|PMID:24766809)
GO_REF:0000024		 RGD
UniProt		 PMID:24766809 PMID:24766810 GO_REF:0000024 MGI:5568133 NCBI chr 3:69,806,774...69,818,633
Ensembl chr 3:69,806,778...69,810,421 		JBrowse link
G Dixdc1 DIX domain containing 1 IMP RGD PMID:19339625 RGD:2308917 NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:2661097 (PMID:20798045) RGD PMID:20798045 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362 		JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) RGD PMID:29360985 NCBI chr 5:68,339,803...68,396,412
Ensembl chr 5:68,340,028...68,396,409 		JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164 		JBrowse link
G Nav2 neuron navigator 2 involved_in ISO (MGI:5050602|PMID:21419114) RGD PMID:21419114 MGI:5050602 NCBI chr 1:98,957,629...99,322,339
Ensembl chr 1:98,663,759...99,322,337 		JBrowse link
G Neurod2 neuronal differentiation 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3621523|PMID:16504944)		 UniProt
Ensembl
RGD		 PMID:16504944 GO_REF:0000024 GO_REF:0000107 MGI:3621523 NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986 		JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO
IEA		 (MGI:3662936|PMID:16901643)
GO_REF:0000107		 RGD
Ensembl		 PMID:16901643 GO_REF:0000107 MGI:3662936 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479 		JBrowse link
cerebellar cortex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861809 (PMID:10407039)		 Ensembl
RGD		 PMID:10407039 GO_REF:0000107 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:99511 (PMID:24431450)		 Ensembl
RGD		 PMID:24431450 GO_REF:0000107 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1346866|MGI:4868451 (PMID:24431450)		 Ensembl
RGD		 PMID:24431450 GO_REF:0000107 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925 		JBrowse link
cerebellar cortex morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO MGI:2178542 (PMID:28556830) RGD PMID:28556830 NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO MGI:95728 (PMID:16571625) RGD PMID:16571625 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:2446434|MGI:3664541|MGI:95727 (PMID:16571625) RGD PMID:16571625 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (PMID:30503862) RGD PMID:30503862 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (PMID:20096683) RGD PMID:20096683 NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176173|MGI:2176256 (PMID:16571625)		 Ensembl
RGD		 PMID:16571625 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Trnp1 TMF1-regulated nuclear protein 1 involved_in ISO (MGI:5490679|PMID:23622239) RGD PMID:23622239 MGI:5490679 NCBI chr 5:145,706,427...145,713,279
Ensembl chr 5:145,706,094...145,713,272 		JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO MGI:3617352 (PMID:17218254) RGD PMID:17218254 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186 		JBrowse link
cerebellar cortex structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp9x ubiquitin specific peptidase 9, X-linked acts_upstream_of_or_within ISO MGI:5438072 (PMID:23861879) RGD PMID:23861879 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
cerebellar granular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5295128|PMID:21957071)		 UniProt
RGD		 PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168 		JBrowse link
G Mdk midkine involved_in ISO
IEA		 (MGI:2178952|PMID:10096022)
GO_REF:0000107		 RGD
Ensembl		 PMID:10096022 GO_REF:0000107 MGI:2178952 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:5700621 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223 		JBrowse link
cerebellar granular layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4831137 (PMID:20153830)		 GO_Central
RGD		 PMID:20153830 GO_REF:0000033 NCBI chr 1:196,525,153...196,528,152
Ensembl chr 1:196,523,920...196,528,302 		JBrowse link
cerebellar granular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2387774 (PMID:17409116)		 Ensembl
RGD		 PMID:17409116 GO_REF:0000107 NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826 		JBrowse link
cerebellar granular layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164 		JBrowse link
cerebellar granule cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (PMID:9668038) RGD PMID:9668038 NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665 		JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:Q61625 (MGI:4839424|PMID:20537373)		 BHF-UCL
RGD		 PMID:20537373 GO_REF:0000024 MGI:4839424 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572 		JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:Q9R171 (MGI:4839424|PMID:20537373)		 BHF-UCL
RGD		 PMID:20537373 GO_REF:0000024 MGI:4839424 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355 		JBrowse link
G Kndc1 kinase non-catalytic C-lobe domain containing 1 acts_upstream_of_or_within ISO (PMID:17984326) RGD PMID:17984326 NCBI chr 1:194,689,962...194,738,353
Ensembl chr 1:194,690,135...194,738,362 		JBrowse link
G Mtpn myotrophin IEP RGD PMID:8144589 RGD:632797 NCBI chr 4:64,159,273...64,186,686
Ensembl chr 4:64,157,641...64,186,724 		JBrowse link
G Nfix nuclear factor I X involved_in
acts_upstream_of_or_within		 ISO MGI:3802571 (PMID:23042739)
MGI:3802571 (PMID:21800304)		 RGD PMID:21800304 PMID:23042739 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO		 GO_REF:0000024
UniProtKB:Q61625|UniProtKB:Q9R171 (MGI:4839424|PMID:20537373)		 BHF-UCL
RGD		 PMID:20537373 GO_REF:0000024 MGI:4839424 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) RGD PMID:27160703 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) RGD PMID:20808958 MGI:4849596 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:11170002 RGD:8693630 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) RGD PMID:10624947 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966 		JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (PMID:9405095) RGD PMID:9405095 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5689090|PMID:22095825)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:22095825 GO_REF:0000024 GO_REF:0000107 MGI:5689090 NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707 		JBrowse link
G Egf epidermal growth factor acts_upstream_of ISO (PMID:10027293) RGD PMID:10027293 NCBI chr 2:218,219,408...218,302,359
Ensembl chr 2:218,219,415...218,302,064 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of ISO (PMID:10027293) RGD PMID:10027293 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:16651541) RGD PMID:16651541 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of ISO (PMID:10027293) RGD PMID:10027293 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Psmg1 proteasome assembly chaperone 1 acts_upstream_of_or_within ISO MGI:4820730 (PMID:20498273) RGD PMID:20498273 NCBI chr11:35,276,080...35,285,541
Ensembl chr11:35,276,011...35,285,622 		JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (PMID:24466353) RGD PMID:24466353 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677 		JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO UniProtKB:Q62226 (MGI:2683830|PMID:14687547) RGD PMID:14687547 MGI:2683830 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of		 ISS
ISO
IEA		 GO_REF:0000024
(PMID:10027293)
UniProtKB:P51448 (MGI:2683830|PMID:14687547), (MGI:5689090|PMID:22095825)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:10027293 PMID:14687547 PMID:22095825 GO_REF:0000024 GO_REF:0000107 MGI:2683830 MGI:5689090 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Zfp423 zinc finger protein 423 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:27727273)		 Ensembl
RGD		 PMID:27727273 GO_REF:0000107 NCBI chr19:19,111,213...19,407,373
Ensembl chr19:19,110,238...19,407,373 		JBrowse link
cerebellar granule cell precursor tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plxna2 plexin A2 acts_upstream_of_or_within ISO MGI:3793763|MGI:3793765 (PMID:18327254) RGD PMID:18327254 NCBI chr13:106,163,103...106,358,979
Ensembl chr13:106,163,103...106,358,979 		JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:5700621 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223 		JBrowse link
cerebellar molecular layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (PMID:7697385) RGD PMID:7697385 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225 		JBrowse link
cerebellar molecular layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5504540|PMID:23688253)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:23688253 GO_REF:0000024 GO_REF:0000107 MGI:5504540 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
cerebellar molecular layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp365 zinc finger protein 365 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5559035|PMID:23912123)		 UniProt
Ensembl
RGD		 PMID:23912123 GO_REF:0000024 GO_REF:0000107 MGI:5559035 NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238 		JBrowse link
cerebellar neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (PMID:19074029) RGD PMID:19074029 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406 		JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (PMID:19074029) RGD PMID:19074029 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238 		JBrowse link
G L1cam L1 cell adhesion molecule IMP RGD PMID:27027721 RGD:401959323 NCBI chr  X:151,597,270...151,623,776
Ensembl chr  X:151,597,277...151,623,857 		JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 acts_upstream_of_or_within ISO (PMID:26609159) RGD PMID:26609159 NCBI chr 1:259,897,663...259,901,561
Ensembl chr 1:259,897,939...259,898,730 		JBrowse link
G Samd4b sterile alpha motif domain containing 4B acts_upstream_of_or_within ISO (PMID:26609159) RGD PMID:26609159 NCBI chr 1:83,689,413...83,728,652
Ensembl chr 1:83,689,413...83,713,853 		JBrowse link
cerebellar Purkinje cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:2159417|PMID:11884758), (MGI:3614720|PMID:16465590), (MGI:4849873|PMID:21074048)
MGI:1856535|MGI:1857523|MGI:2443047|MGI:6270378 (PMID:10630211), (PMID:30420556)		 RGD PMID:10630211 PMID:11884758 PMID:16465590 PMID:21074048 PMID:30420556 MGI:2159417 MGI:3614720 MGI:4849873 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869 		JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (PMID:9668038) RGD PMID:9668038 NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665 		JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856466 (PMID:2473662) RGD PMID:2473662 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Atxn2 ataxin 2 acts_upstream_of_or_within ISO MGI:3505741 (PMID:10973246) RGD PMID:10973246 NCBI chr12:34,754,132...34,851,175
Ensembl chr12:34,754,137...34,851,479 		JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (PMID:10630211), (PMID:1306163), (PMID:7834360) RGD PMID:1306163 PMID:7834360 PMID:10630211 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225 		JBrowse link
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4831137 (PMID:20153830)		 GO_Central
RGD		 PMID:20153830 GO_REF:0000033 NCBI chr 1:196,525,153...196,528,152
Ensembl chr 1:196,523,920...196,528,302 		JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5295128|PMID:21957071)		 UniProt
RGD		 PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168 		JBrowse link
G Foxp2 forkhead box P2 involved_in ISO MGI:3778383 (PMID:22133810) RGD PMID:22133810 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683 		JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:3613033 (PMID:20041218) RGD PMID:20041218 NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312 		JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:3719683 (PMID:17664423) RGD PMID:17664423 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:107792 (PMID:17664423)		 UniProt
RGD		 PMID:17664423 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:99783 (PMID:17664423) RGD PMID:17664423 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO MGI:3521746 (PMID:15345707) RGD PMID:15345707 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498 		JBrowse link
G Rora RAR-related orphan receptor A acts_upstream_of_or_within ISO MGI:1857035 (PMID:8996814) RGD PMID:8996814 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931 		JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO MGI:5300464 (PMID:21937600), (PMID:24491816) RGD PMID:21937600 PMID:24491816 NCBI chr18:70,404,431...70,446,330
Ensembl chr18:70,404,489...70,440,342 		JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within ISO MGI:6358090 (PMID:28934388) RGD PMID:28934388 NCBI chr18:23,215,954...23,244,917
Ensembl chr18:23,215,962...23,244,314 		JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:11170002 RGD:8693630 NCBI chr10:83,945,731...83,976,874
Ensembl chr10:83,945,735...83,976,874 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2137515|MGI:2152544|MGI:2179048|MGI:5587034 (PMID:29615573) RGD PMID:29615573 NCBI chr 3:50,861,367...50,935,880
Ensembl chr 3:50,861,367...50,935,903 		JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within ISO MGI:1918244 (PMID:30420556) RGD PMID:30420556 NCBI chr 7:114,619,509...114,648,850
Ensembl chr 7:114,619,508...114,648,761 		JBrowse link
cerebellar Purkinje cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 acts_upstream_of_or_within ISO MGI:3618596 (PMID:16906134) RGD PMID:16906134 NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147 		JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within ISO (PMID:21052544) RGD PMID:21052544 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2386545|MGI:3587769 (PMID:16625205), (PMID:20577052) RGD PMID:16625205 PMID:20577052 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593 		JBrowse link
G B4galt2 beta-1,4-galactosyltransferase 2 acts_upstream_of_or_within ISO MGI:3849305 (PMID:19265195) RGD PMID:19265195 NCBI chr 5:131,412,541...131,422,573
Ensembl chr 5:131,412,541...131,421,013 		JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:1856210 (PMID:1306163) RGD PMID:1306163 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225 		JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5295128|PMID:21957071)		 UniProt
RGD		 PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO
IEA		 (MGI:4437543|PMID:19816510)
GO_REF:0000107		 RGD
Ensembl		 PMID:19816510 GO_REF:0000107 MGI:4437543 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891 		JBrowse link
G Klhl1 kelch-like family member 1 acts_upstream_of_or_within ISO MGI:3664534|MGI:3664543 (PMID:17005861) RGD PMID:17005861 NCBI chr15:72,698,191...73,142,726
Ensembl chr15:72,699,094...73,142,594 		JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:3664765 (PMID:16481398) RGD PMID:16481398 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO MGI:1934018 (PMID:17712420) RGD PMID:17712420 NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (PMID:21800304) RGD PMID:21800304 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Sez6 seizure related 6 homolog acts_upstream_of_or_within ISO MGI:1935121|MGI:2385295 (PMID:16814779) RGD PMID:16814779 NCBI chr10:62,818,931...62,868,686
Ensembl chr10:62,819,069...62,868,671 		JBrowse link
G Sez6l seizure related 6 homolog like acts_upstream_of_or_within ISO MGI:104745|MGI:2385295 (PMID:16814779) RGD PMID:16814779 NCBI chr12:44,064,901...44,221,814
Ensembl chr12:44,064,935...44,219,663 		JBrowse link
G Sez6l2 seizure related 6 homolog like 2 acts_upstream_of_or_within ISO MGI:104745|MGI:1935121 (PMID:16814779) RGD PMID:16814779 NCBI chr 1:181,557,109...181,577,456
Ensembl chr 1:181,557,109...181,577,456 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in ISO (MGI:3662936|PMID:16901643) RGD PMID:16901643 MGI:3662936 NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169 		JBrowse link
cerebellar Purkinje cell layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:17954912) RGD PMID:17954912 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Whrn whirlin involved_in IEA
ISO		 GO_REF:0000107
(MGI:5516521|PMID:24011083)		 Ensembl
RGD		 PMID:24011083 GO_REF:0000107 MGI:5516521 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
cerebellar Purkinje cell layer maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arcn1 archain 1 acts_upstream_of_or_within ISO MGI:2671790 (PMID:20502676) RGD PMID:20502676 NCBI chr 8:45,057,617...45,082,224
Ensembl chr 8:45,057,619...45,082,247 		JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (PMID:24466353) RGD PMID:24466353 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677 		JBrowse link
cerebellar Purkinje cell layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:1857876 (PMID:17409239) RGD PMID:17409239 NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32675284) RGD PMID:32675284 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Coq8b coenzyme Q8B involved_in ISS
ISO		 GO_REF:0000024
(PMID:27499294)		 UniProt
RGD		 PMID:27499294 GO_REF:0000024 NCBI chr 1:82,525,578...82,549,182
Ensembl chr 1:82,526,568...82,549,180 		JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4127354 (PMID:20231455)		 Ensembl
RGD		 PMID:20231455 GO_REF:0000107 NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283 		JBrowse link
cerebellar Purkinje cell layer structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5504540|PMID:23688253)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:23688253 GO_REF:0000024 GO_REF:0000107 MGI:5504540 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164 		JBrowse link
cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:107792 (PMID:17664423)		 UniProt
RGD		 PMID:17664423 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:99783 (PMID:17664423) RGD PMID:17664423 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625 		JBrowse link
cerebellum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IEP RGD PMID:7182074 RGD:10047093 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835 		JBrowse link
G Acvr1c activin A receptor type 1C IEP RGD PMID:8940033 RGD:631880 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327 		JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 acts_upstream_of_or_within ISO MGI:1856535 (PMID:7891151) RGD PMID:7891151 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869 		JBrowse link
G Aif1 allograft inflammatory factor 1 IEP RGD PMID:9698327 RGD:704401 NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668 		JBrowse link
G Ak1 adenylate kinase 1 IEP RGD PMID:9920788 RGD:632499 NCBI chr 3:15,912,431...15,923,045
Ensembl chr 3:15,912,485...15,923,041 		JBrowse link
G Ak3 adenylate kinase 3 IEP RGD PMID:9920788 RGD:632499 NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625 		JBrowse link
G Amigo2 adhesion molecule with Ig like domain 2 IEP RGD PMID:12843293 RGD:1299593 NCBI chr 7:128,391,493...128,394,589
Ensembl chr 7:128,390,412...128,394,695 		JBrowse link
G Arhgap32 Rho GTPase activating protein 32 IEP RGD PMID:23226367 RGD:151665335 NCBI chr 8:30,421,269...30,681,653
Ensembl chr 8:30,421,515...30,678,454 		JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IEP RGD PMID:7057182 RGD:2301991 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889 		JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO MGI:3664103 (PMID:16880690) RGD PMID:16880690 NCBI chr 4:146,894,602...147,208,060
Ensembl chr 4:146,896,332...147,140,665 		JBrowse link
G Atrn attractin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856082 (PMID:18064672)		 Ensembl
RGD		 PMID:18064672 GO_REF:0000107 NCBI chr 3:118,110,320...118,244,326
Ensembl chr 3:118,110,229...118,244,322 		JBrowse link
G Ccr1 C-C motif chemokine receptor 1 IEP RGD PMID:12541321 RGD:5688179 NCBI chr 8:123,556,286...123,561,841 JBrowse link
G Cd3e CD3 epsilon subunit of T-cell receptor complex involved_in ISO (MGI:3718938|PMID:17502348) RGD PMID:17502348 MGI:3718938 NCBI chr 8:45,303,848...45,315,005
Ensembl chr 8:45,303,852...45,315,022 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (PMID:11226314) RGD PMID:11226314 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828|MGI:2680652 (PMID:11226314), (PMID:11517264) RGD PMID:11226314 PMID:11517264 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456 		JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (PMID:11517264) RGD PMID:11517264 NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A IEP RGD PMID:9693786 RGD:8552681 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Ckb creatine kinase B IEP RGD PMID:12093362 RGD:625711 NCBI chr 6:130,729,420...130,732,301
Ensembl chr 6:130,729,423...130,732,315 		JBrowse link
G Ckmt1 creatine kinase, mitochondrial 1 IEP RGD PMID:12093362 RGD:625711 NCBI chr 3:108,329,859...108,335,760
Ensembl chr 3:108,330,705...108,335,758 		JBrowse link
G Cntn1 contactin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3043422 (PMID:18354028)		 Ensembl
RGD		 PMID:18354028 GO_REF:0000107 NCBI chr 7:123,263,146...123,560,896
Ensembl chr 7:123,372,792...123,558,541 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:32675284) RGD PMID:32675284 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Cplane1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO MGI:5297398 (PMID:25877302) RGD PMID:25877302 NCBI chr 2:57,269,195...57,369,580
Ensembl chr 2:57,268,884...57,369,500 		JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IEP RGD PMID:16820012 RGD:5131267 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904 		JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:16329132 RGD:1599699 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338 		JBrowse link
G En1 engrailed homeobox 1 involved_in ISO UniProtKB:P04426 (MGI:82938|PMID:8848044) RGD PMID:8848044 MGI:82938 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Esr2 estrogen receptor 2 IEP RGD PMID:16542644 RGD:1601098 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919 		JBrowse link
G Faim2 Fas apoptotic inhibitory molecule 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5295128|PMID:21957071)		 UniProt
RGD		 PMID:21957071 GO_REF:0000024 MGI:5295128 NCBI chr 7:130,632,368...130,659,353
Ensembl chr 7:130,633,348...130,659,168 		JBrowse link
G Fcgr2b Fc gamma receptor 2B involved_in ISO (MGI:3718938|PMID:17502348) RGD PMID:17502348 MGI:3718938 NCBI chr13:83,191,253...83,207,778
Ensembl chr13:83,193,163...83,207,778 		JBrowse link
G Foxc1 forkhead box C1 involved_in ISO (MGI:4359553|PMID:19668217) RGD PMID:19668217 MGI:4359553 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Foxp2 forkhead box P2 acts_upstream_of_or_within ISO MGI:3584266|MGI:3723630 (PMID:15983371), (PMID:17619227) RGD PMID:15983371 PMID:17619227 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683 		JBrowse link
G Gabrb3 gamma-aminobutyric acid type A receptor subunit beta 3 acts_upstream_of_or_within ISO (PMID:17983671) RGD PMID:17983671 NCBI chr 1:108,467,047...108,702,522
Ensembl chr 1:108,296,124...108,698,961 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IEP RGD PMID:7057182 RGD:2301991 NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:16651541) RGD PMID:16651541 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Gdf10 growth differentiation factor 10 IEP RGD PMID:8605043 RGD:631791 NCBI chr16:9,237,182...9,250,537
Ensembl chr16:9,237,261...9,249,343 		JBrowse link
G Glud1 glutamate dehydrogenase 1 IEP RGD PMID:7182074 RGD:10047093 NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957 		JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3814764|PMID:18636121)		 Ensembl
RGD		 PMID:18636121 GO_REF:0000107 MGI:3814764 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IEP RGD PMID:19115409 RGD:10041070 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:22102872 RGD:10002783 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IEP RGD PMID:9764759 RGD:10059383 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259 		JBrowse link
G Igf1r insulin-like growth factor 1 receptor IEP
IMP		 RGD PMID:23397157 PMID:21443795 RGD:10403039, RGD:12904969 NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777 		JBrowse link
G Insr insulin receptor IEP RGD PMID:23397157 RGD:10403039 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:9526005 RGD:9685724 NCBI chr 1:96,902,953...96,944,744
Ensembl chr 1:96,902,953...96,944,744 		JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:3719683 (PMID:17664423) RGD PMID:17664423 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:107792 (PMID:17664423)		 UniProt
RGD		 PMID:17664423 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:99783 (PMID:17664423) RGD PMID:17664423 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (PMID:1638738) RGD PMID:1638738 NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 IEP RGD PMID:9753172 RGD:2317716 NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895 		JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within IEP
ISO		 MGI:2158354 (PMID:18571096) RGD PMID:18571096 PMID:14751287 RGD:12743658 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Mt-co1 mitochondrially encoded cytochrome c oxidase I IEP RGD PMID:2465379 RGD:2302317 NCBI chr MT:5,323...6,867
NCBI chr MT:5,323...6,867
NCBI chr MT:5,323...6,867
Ensembl chr MT:5,323...6,867 		JBrowse link
G Mt-nd4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 IEP RGD PMID:2465379 RGD:2302317 NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
Ensembl chr MT:10,160...11,537 		JBrowse link
G Myo16 myosin XVI involved_in IEP PMID:11588169 HGNC-UCL PMID:11588169 RGD:633234 NCBI chr16:78,884,405...79,364,445
Ensembl chr16:78,884,406...79,248,388 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:10803578 PMID:15876152 RGD:2293531, RGD:5688232 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 IEP RGD PMID:10803578 RGD:2293531 NCBI chr 5:5,835,642...6,069,693
Ensembl chr 5:5,835,706...6,067,451 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 IEP RGD PMID:10803578 RGD:2293531 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 IEP RGD PMID:10803578 RGD:2293531 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 IEP RGD PMID:10803578 RGD:2293531 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319 		JBrowse link
G Ncstn nicastrin IEP RGD PMID:16298244 RGD:13801190 NCBI chr13:84,530,442...84,546,454
Ensembl chr13:84,530,440...84,546,454 		JBrowse link
G Neurod1 neuronal differentiation 1 involved_in IEP
ISO		 (MGI:2159022|PMID:10398678) RGD PMID:10398678 PMID:12242038 MGI:2159022, RGD:1625048 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (PMID:21800304) RGD PMID:21800304 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 involved_in ISO (MGI:5285161|PMID:20393820) RGD PMID:20393820 MGI:5285161 NCBI chr 4:124,610,216...124,666,813
Ensembl chr 4:124,608,960...124,661,902 		JBrowse link
G Ntm neurotrimin IEP RGD PMID:12373100 RGD:2314481 NCBI chr 8:27,376,582...28,366,604
Ensembl chr 8:27,377,773...28,366,595 		JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 IEP RGD PMID:20395366 RGD:11533946 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383 		JBrowse link
G Pax6 paired box 6 IEP RGD PMID:11688562 RGD:8552644 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Pdss2 decaprenyl diphosphate synthase subunit 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5304241|PMID:21871565)		 UniProt
RGD		 PMID:21871565 GO_REF:0000024 MGI:5304241 NCBI chr20:46,709,631...46,938,704
Ensembl chr20:46,709,649...46,938,708 		JBrowse link
G Pfdn1 prefoldin subunit 1 acts_upstream_of_or_within ISO MGI:3800373 (PMID:18566413) RGD PMID:18566413 NCBI chr18:28,014,145...28,067,148
Ensembl chr18:28,014,145...28,067,064 		JBrowse link
G Pianp PILR alpha associated neural protein acts_upstream_of_or_within ISO (PMID:31511635) RGD PMID:31511635 NCBI chr 4:157,796,425...157,804,842
Ensembl chr 4:157,798,808...157,804,842 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17335037 RGD:10059646 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 IEP RGD PMID:15763176 RGD:7777107 NCBI chr 1:228,409,605...229,638,794
Ensembl chr 1:228,408,947...229,639,080 		JBrowse link
G Psen1 presenilin 1 IEP RGD PMID:16298244 RGD:13801190 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 IEP RGD PMID:9917071 RGD:10045971 NCBI chr 2:207,812,659...207,874,019
Ensembl chr 2:207,812,920...207,873,506 		JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in ISS
ISO		 GO_REF:0000024
(MGI:3703683|PMID:15543146)
(PMID:15543146)		 UniProt
RGD		 PMID:15543146 GO_REF:0000024 MGI:3703683 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135 		JBrowse link
G Ptn pleiotrophin IEP RGD PMID:8653419 RGD:10043831 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2158734 (PMID:15842738)		 Ensembl
RGD		 PMID:15842738 GO_REF:0000107 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947 		JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (PMID:24466353) RGD PMID:24466353 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 IEP RGD PMID:22331407 RGD:6484221 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
G Sdf4 stromal cell derived factor 4 involved_in IEP PMID:18355758 BHF-UCL PMID:18355758 RGD:8554427 NCBI chr 5:166,586,581...166,606,661
Ensembl chr 5:166,586,390...166,604,521 		JBrowse link
G Sema4c semaphorin 4C involved_in ISO (MGI:4881530|PMID:21122816) RGD PMID:21122816 MGI:4881530 NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128 		JBrowse link
G Sstr1 somatostatin receptor 1 IEP RGD PMID:9166718 RGD:2325007 NCBI chr 6:75,832,292...75,836,806
Ensembl chr 6:75,832,530...75,836,802 		JBrowse link
G Sstr2 somatostatin receptor 2 IEP RGD PMID:9166718 RGD:2325007 NCBI chr10:98,664,204...98,671,370
Ensembl chr10:98,664,216...98,674,351 		JBrowse link
G Sstr3 somatostatin receptor 3 IEP RGD PMID:9166718 RGD:2325007 NCBI chr 7:110,092,563...110,109,043
Ensembl chr 7:110,092,575...110,099,769 		JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:24013501)		 Ensembl
RGD		 PMID:24013501 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (MGI:5700621|PMID:26323690) RGD PMID:26323690 MGI:5700621 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2152544|MGI:2179048|MGI:5587034 (PMID:29615573) RGD PMID:29615573 NCBI chr 3:50,861,367...50,935,880
Ensembl chr 3:50,861,367...50,935,903 		JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (MGI:82938|PMID:8848044) RGD PMID:8848044 MGI:82938 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (PMID:19409883) RGD PMID:19409883 NCBI chr13:89,439,501...89,447,958
Ensembl chr13:89,439,420...89,448,862 		JBrowse link
cerebellum formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 involved_in ISO (MGI:1931348|PMID:2202907) RGD PMID:2202907 MGI:1931348 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
cerebellum maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:2180190 (PMID:11344116) RGD PMID:11344116 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225 		JBrowse link
cerebellum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87860 (PMID:20980600) RGD PMID:20980600 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:87859 (PMID:20980600) RGD PMID:20980600 NCBI chr13:68,673,702...68,770,846
Ensembl chr13:68,673,722...68,839,742 		JBrowse link
G Cbs cystathionine beta synthase acts_upstream_of_or_within ISO MGI:1857139 (PMID:16160063) RGD PMID:16160063 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Gas1 growth arrest-specific 1 acts_upstream_of_or_within ISO MGI:2388397 (PMID:11456442) RGD PMID:11456442 NCBI chr17:4,482,168...4,485,153 JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (PMID:19270340) RGD PMID:19270340 NCBI chr19:52,822,326...52,848,872
Ensembl chr19:52,822,319...52,852,361 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO MGI:2158463 (PMID:17166916) RGD PMID:17166916 NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:11029008) RGD PMID:11029008 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO MGI:5300464 (PMID:21937600) RGD PMID:21937600 NCBI chr18:70,404,431...70,446,330
Ensembl chr18:70,404,489...70,440,342 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (MGI:5902647|PMID:28002403) RGD PMID:28002403 MGI:5902647 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
cerebellum structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861918 (PMID:9338785)		 Ensembl
RGD		 PMID:9338785 GO_REF:0000107 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO
IEA		 (MGI:4437543|PMID:19816510)
GO_REF:0000107		 RGD
Ensembl		 PMID:19816510 GO_REF:0000107 MGI:4437543 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891 		JBrowse link
cerebellum vasculature morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd4 frizzled class receptor 4 involved_in ISO (MGI:3621833|PMID:15035989) RGD PMID:15035989 MGI:3621833 NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724 		JBrowse link
cerebral cortex cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within ISO MGI:3050637 (PMID:15249135) RGD PMID:15249135 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552 		JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090 		JBrowse link
G Efhc1 EF-hand domain containing 1 involved_in ISO (PMID:22926142) RGD PMID:22926142 NCBI chr 9:23,375,815...23,414,283
Ensembl chr 9:23,375,840...23,414,283 		JBrowse link
G Egfr epidermal growth factor receptor acts_upstream_of_or_within ISO MGI:1856402 (PMID:7618084) RGD PMID:7618084 NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5431268|PMID:22726441)		 UniProt
RGD		 PMID:22726441 GO_REF:0000024 MGI:5431268 NCBI chr  X:137,276,498...137,800,056
Ensembl chr  X:137,276,511...137,800,391 		JBrowse link
G Htr6 5-hydroxytryptamine receptor 6 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5607347|PMID:25078650)		 UniProt
RGD		 PMID:25078650 GO_REF:0000024 MGI:5607347 NCBI chr 5:151,295,269...151,312,853
Ensembl chr 5:151,296,662...151,311,912 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:16920270) RGD PMID:16920270 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18786357)		 Ensembl
RGD		 PMID:18786357 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Pex13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within ISO MGI:2384515 (PMID:12897163) RGD PMID:12897163 NCBI chr14:97,602,829...97,621,233
Ensembl chr14:97,603,539...97,621,262 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO MGI:2154454 (PMID:10653000), (PMID:9288097) RGD PMID:9288097 PMID:10653000 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1857974 (PMID:16079160) RGD PMID:16079160 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO MGI:4950374 (PMID:22405202) RGD PMID:22405202 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
cerebral cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO MGI:5607284|MGI:95387 (PMID:25100583) RGD PMID:25100583 NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216 		JBrowse link
G Ahsg alpha-2-HS-glycoprotein IEP RGD PMID:2423927 RGD:1626077 NCBI chr11:78,121,388...78,127,998
Ensembl chr11:78,117,918...78,145,999 		JBrowse link
G Akirin2 akirin 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5811685|PMID:27871306)		 UniProt
RGD		 PMID:27871306 GO_REF:0000024 MGI:5811685 NCBI chr 5:49,108,231...49,122,566
Ensembl chr 5:49,108,220...49,122,568 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (PMID:17678855) RGD PMID:17678855 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO MGI:5573152 (PMID:24220505) RGD PMID:24220505 NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2386545|MGI:3587769 (PMID:16625205) RGD PMID:16625205 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593 		JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IEP RGD PMID:7057182 RGD:2301991 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983 (PMID:16325379) RGD PMID:16325379 NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154 		JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within IEP
ISO		 MGI:4356167 (PMID:23527305) RGD PMID:23527305 PMID:19362129 RGD:11576282 NCBI chr 1:80,572,790...80,601,936
Ensembl chr 1:80,572,796...80,601,918 		JBrowse link
G Bad BCL2-associated agonist of cell death IEP RGD PMID:9813151 RGD:2315711 NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823 		JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within IEP
ISO		 MGI:1857429 (PMID:15342910) RGD PMID:15342910 PMID:9813151 RGD:2315711 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (PMID:18032602) RGD PMID:18032602 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:18032602) RGD PMID:18032602 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:18032602) RGD PMID:18032602 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Bcl2 BCL2, apoptosis regulator IEP RGD PMID:9813151 RGD:2315711 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Bcl2a1 BCL2-related protein A1 IEP RGD PMID:9813151 RGD:2315711 NCBI chr 8:89,716,914...89,724,998
Ensembl chr 8:89,716,914...89,724,998 		JBrowse link
G Bcl2l1 Bcl2-like 1 IEP RGD PMID:9813151 RGD:2315711 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479 		JBrowse link
G Bnip3 BCL2 interacting protein 3 IEP RGD PMID:16765336 RGD:11561980 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359 		JBrowse link
G Btbd3 BTB domain containing 3 involved_in ISO
IBA		 (MGI:5527009|PMID:24179155)
GO_REF:0000033		 RGD
GO_Central		 PMID:24179155 GO_REF:0000033 MGI:5527009 NCBI chr 3:125,591,427...125,621,660
Ensembl chr 3:125,591,490...125,619,038 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase IEP RGD PMID:10749215 RGD:11576295 NCBI chr  X:8,899,500...9,243,014
Ensembl chr  X:8,899,833...9,238,694 		JBrowse link
G Ccdc85c coiled-coil domain containing 85C involved_in ISO (MGI:5305566|PMID:22056358) RGD PMID:22056358 MGI:5305566 NCBI chr 6:127,113,440...127,184,328
Ensembl chr 6:127,113,442...127,184,371 		JBrowse link
G Cdh2 cadherin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:95387 (PMID:25100583)		 Ensembl
RGD		 PMID:25100583 GO_REF:0000107 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (PMID:9698328) RGD PMID:9698328 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2653120 (PMID:16648472)		 Ensembl
RGD		 PMID:16648472 GO_REF:0000107 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033 		JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:32245946)		 Ensembl
RGD		 PMID:32245946 GO_REF:0000107 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426 		JBrowse link
G Cep120 centrosomal protein 120 acts_upstream_of_or_within ISO (PMID:17920017) RGD PMID:17920017 NCBI chr18:47,127,979...47,189,964
Ensembl chr18:47,127,981...47,189,964 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179893), (PMID:18987363) RGD PMID:18179893 PMID:18987363 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISS
ISO		 GO_REF:0000024
(MGI:5288127|PMID:21768377)		 UniProt
RGD		 PMID:21768377 GO_REF:0000024 MGI:5288127 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (PMID:19074029) RGD PMID:19074029 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406 		JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (PMID:19074029) RGD PMID:19074029 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238 		JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 IEP RGD PMID:12801913 RGD:634609 NCBI chr 3:133,338,593...133,354,329
Ensembl chr 3:133,337,039...133,354,302
Ensembl chr 6:133,337,039...133,354,302 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 IEP RGD PMID:7735332 RGD:11565823 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 IEP RGD PMID:7735332 RGD:11565823 NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080 		JBrowse link
G Dab1 DAB adaptor protein 1 IEP RGD PMID:20368265 RGD:2324624 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552 		JBrowse link
G Dcc DCC netrin 1 receptor IEP RGD PMID:22473424 RGD:10411906 NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3641051 (PMID:18997113) RGD PMID:18997113 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 IEP RGD PMID:14597197 RGD:152975667 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 IEP RGD PMID:14597197 RGD:152975667 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153 		JBrowse link
G Dmd dystrophin IEP RGD PMID:1454857 RGD:12880362 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:1314653|MGI:1928281|MGI:88355|MGI:95388 (PMID:12764040), (PMID:16892058), (PMID:25100583) RGD PMID:12764040 PMID:16892058 PMID:25100583 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:95387 (PMID:12764040) RGD PMID:12764040 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Eomes eomesodermin involved_in ISO (PMID:30186101) RGD PMID:30186101 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Fat4 FAT atypical cadherin 4 involved_in ISO (MGI:4821246|PMID:19506035) RGD PMID:19506035 MGI:4821246 NCBI chr 2:121,927,266...122,056,700
Ensembl chr 2:121,927,942...122,056,707 		JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO (PMID:29360985) RGD PMID:29360985 NCBI chr 5:68,339,803...68,396,412
Ensembl chr 5:68,340,028...68,396,409 		JBrowse link
G Flna filamin A IEP RGD PMID:22076441 RGD:11564351 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit IMP RGD PMID:32385110 RGD:405649740 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:22726835) RGD PMID:22726835 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607 		JBrowse link
G Foxp2 forkhead box P2 involved_in ISO
IEA		 (PMID:18987363)
GO_REF:0000107		 RGD
Ensembl		 PMID:18987363 GO_REF:0000107 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IEP RGD PMID:7057182 RGD:2301991 NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125 		JBrowse link
G Gng12 G protein subunit gamma 12 IEP RGD PMID:9003074 RGD:2314446 NCBI chr 4:96,011,118...96,134,767
Ensembl chr 4:96,010,952...96,134,712 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 IEP RGD PMID:14597197 RGD:152975667 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 IEP RGD PMID:14597197 RGD:152975667 NCBI chr 2:165,949,379...166,069,510
Ensembl chr 2:165,947,521...166,069,510 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928279|MGI:1928281|MGI:2655232|MGI:2655237 (PMID:10963597), (PMID:12657691) RGD PMID:10963597 PMID:12657691 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19409459 RGD:2325985 NCBI chr10:5,629,683...6,053,262
Ensembl chr10:5,631,369...6,044,637 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:19409459 RGD:2325985 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279 		JBrowse link
G Grip1 glutamate receptor interacting protein 1 IEP RGD PMID:14597197 RGD:152975667 NCBI chr 7:54,934,856...55,592,274
Ensembl chr 7:54,934,250...55,592,273 		JBrowse link
G H2ax H2A.X variant histone IEP RGD PMID:3622934 RGD:8693731 NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2677899 (PMID:12972594)		 Ensembl
RGD		 PMID:12972594 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP
IDA		 RGD PMID:22102872 PMID:18054780 RGD:10002783, RGD:10041004 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997 		JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682 		JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400 		JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:195,063,967...195,100,244
Ensembl chr 2:195,071,769...195,099,233 		JBrowse link
G Kdm1a lysine demethylase 1A IEP RGD PMID:20164337 RGD:9588288 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164 		JBrowse link
G Kif26a kinesin family member 26A involved_in ISO (PMID:36228617) RGD PMID:36228617 NCBI chr 6:131,214,839...131,250,874
Ensembl chr 6:131,214,861...131,250,320 		JBrowse link
G Kif5a kinesin family member 5A IEP RGD PMID:9349526 RGD:12792964 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858 		JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4399044 (PMID:19820705)
(MGI:5699500|PMID:26371318), (MGI:5817507|PMID:28053041)		 Ensembl
RGD		 PMID:19820705 PMID:26371318 PMID:28053041 GO_REF:0000107 MGI:5699500 MGI:5817507 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908 		JBrowse link
G Lrp1 LDL receptor related protein 1 IEP RGD PMID:8930375 RGD:10046019 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:16920270) RGD PMID:16920270 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Lrp8 LDL receptor related protein 8 IEP RGD PMID:20368265 RGD:2324624 NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352 		JBrowse link
G Mcph1 microcephalin 1 acts_upstream_of_or_within ISO MGI:5308745 (PMID:21947081) RGD PMID:21947081 NCBI chr16:71,021,855...71,224,067
Ensembl chr16:71,024,588...71,224,122 		JBrowse link
G Mdk midkine involved_in ISO
IEA		 (MGI:2178952|PMID:10096022)
GO_REF:0000107		 RGD
Ensembl		 PMID:10096022 GO_REF:0000107 MGI:2178952 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:14751287 RGD:12743658 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Mgarp mitochondria-localized glutamic acid-rich protein involved_in ISO (MGI:6760736|PMID:24323429) RGD PMID:24323429 MGI:6760736 NCBI chr 2:135,431,283...135,439,425
Ensembl chr 2:135,431,283...135,439,612 		JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (PMID:18032602) RGD PMID:18032602 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162 		JBrowse link
G Nars1 asparaginyl-tRNA synthetase 1 involved_in ISO (PMID:32788587) RGD PMID:32788587 NCBI chr18:57,989,308...58,005,584
Ensembl chr18:57,989,308...58,005,622 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:12551846 RGD:5688241 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664 		JBrowse link
G Nde1 nudE neurodevelopment protein 1 involved_in
acts_upstream_of_or_within		 ISO
IEA
ISS		 (PMID:21529752)
MGI:109520 (PMID:18469343)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18469343 PMID:21529752 GO_REF:0000024 GO_REF:0000107 NCBI chr10:839,788...883,946
Ensembl chr10:839,788...883,869 		JBrowse link
G Nefh neurofilament heavy chain IEP RGD PMID:10439464 RGD:9743942 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351 		JBrowse link
G Nefl neurofilament light chain IEP RGD PMID:10439464 RGD:9743942 NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793 		JBrowse link
G Nefm neurofilament medium chain IEP RGD PMID:10439464 RGD:9743942 NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:2176055|MGI:2176057 (PMID:11297510)
GO_REF:0000024		 Ensembl
RGD
HGNC-UCL		 PMID:11297510 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3802571 (PMID:18477394) RGD PMID:18477394 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Npy neuropeptide Y involved_in ISO
IEA		 (PMID:9067840)
GO_REF:0000107		 RGD
Ensembl		 PMID:9067840 GO_REF:0000107 NCBI chr 4:78,881,294...78,888,495
Ensembl chr 4:78,881,264...78,888,495 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350|MGI:2176490 (PMID:11997145), (PMID:12527005), (PMID:15950290), (PMID:16000615) RGD PMID:11997145 PMID:12527005 PMID:15950290 PMID:16000615 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 IEP RGD PMID:21056632 RGD:124713572 NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877 		JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 involved_in ISO (MGI:6369928|PMID:31462248) RGD PMID:31462248 MGI:6369928 NCBI chr12:21,293,637...21,299,319
Ensembl chr12:21,293,645...21,299,272 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(MGI:3776308|PMID:15372074)		 Ensembl
UniProt
RGD		 PMID:15372074 GO_REF:0000024 GO_REF:0000107 MGI:3776308 NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:9063735)
MGI:1914453|MGI:2387783 (PMID:11344260), (PMID:18469343)		 RGD PMID:9063735 PMID:11344260 PMID:18469343 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in ISS
ISO		 GO_REF:0000024
(MGI:4454735|PMID:20399730)		 UniProt
RGD		 PMID:20399730 GO_REF:0000024 MGI:4454735 NCBI chr 6:97,548,133...97,654,163
Ensembl chr 6:97,548,630...97,653,305 		JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within ISO MGI:2386577 (PMID:23349049) RGD PMID:23349049 NCBI chr 5:58,763,334...58,945,719
Ensembl chr 5:58,765,036...58,944,326 		JBrowse link
G Pax6 paired box 6 involved_in ISO (PMID:30186101) RGD PMID:30186101 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Phactr1 phosphatase and actin regulator 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:6316857|PMID:30256902)		 UniProt
Ensembl
RGD		 PMID:30256902 GO_REF:0000024 GO_REF:0000107 MGI:6316857 NCBI chr17:21,560,364...22,040,166
Ensembl chr17:21,562,721...22,039,831 		JBrowse link
G Plcb1 phospholipase C beta 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:3628680|PMID:11224545)
GO_REF:0000107		 BHF-UCL
RGD
Ensembl		 PMID:11224545 GO_REF:0000024 GO_REF:0000107 MGI:3628680 NCBI chr 3:122,059,988...122,772,896
Ensembl chr 3:122,060,031...122,772,869 		JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B IEP RGD PMID:9275233 RGD:625590 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1857974 (PMID:16079160) RGD PMID:16079160 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2158734 (PMID:15842738)		 Ensembl
RGD		 PMID:15842738 GO_REF:0000107 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947 		JBrowse link
G Reln reelin acts_upstream_of_or_within IEP
ISO		 MGI:1856398 (PMID:21491433) RGD PMID:21491433 PMID:10436054 RGD:634730 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 3:50,302,781...50,437,504
Ensembl chr 3:50,302,877...50,437,214 		JBrowse link
G Slc2a1 solute carrier family 2 member 1 IEP RGD PMID:16581179 RGD:12879481 NCBI chr 5:132,717,196...132,745,416
Ensembl chr 5:132,717,196...132,745,416 		JBrowse link
G Slc2a3 solute carrier family 2 member 3 IEP RGD PMID:16581179 RGD:12879481 NCBI chr 4:155,960,944...156,026,000
Ensembl chr 4:155,960,946...156,025,472 		JBrowse link
G Slc38a2 solute carrier family 38, member 2 IEP RGD PMID:21718781 RGD:9999217 NCBI chr 7:127,851,267...127,863,482
Ensembl chr 7:127,851,267...127,863,436 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176256 (PMID:23680462)		 Ensembl
RGD		 PMID:23680462 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:2181440|MGI:3052123 (PMID:15240551) RGD PMID:15240551 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461 		JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:17920017)		 GO_Central
RGD		 PMID:17920017 GO_REF:0000033 NCBI chr16:66,812,232...66,895,736
Ensembl chr16:66,812,295...66,895,733 		JBrowse link
G Tacc2 transforming, acidic coiled-coil containing protein 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:17920017)		 GO_Central
RGD		 PMID:17920017 GO_REF:0000033 NCBI chr 1:185,139,223...185,327,881
Ensembl chr 1:185,116,111...185,327,881 		JBrowse link
G Tacc3 transforming, acidic coiled-coil containing protein 3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:17920017)		 GO_Central
RGD		 PMID:17920017 GO_REF:0000033 NCBI chr14:77,051,209...77,065,343
Ensembl chr14:77,051,215...77,065,219 		JBrowse link
G Tbr1 T-box brain transcription factor 1 involved_in IEP
ISO		 (PMID:30186101) RGD PMID:30186101 PMID:10749215 RGD:11576295 NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041 		JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO MGI:2176695 (PMID:19749747) RGD PMID:19749747 NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995 		JBrowse link
G Th tyrosine hydroxylase IEP RGD PMID:21295554 RGD:5128671 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767 		JBrowse link
G Trappc9 trafficking protein particle complex subunit 9 involved_in ISO (PMID:20004763) RGD PMID:20004763 NCBI chr 7:104,521,593...104,998,352
Ensembl chr 7:104,521,593...104,998,352 		JBrowse link
G Tsc1 TSC complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176055|MGI:2656240 (PMID:17522300)		 Ensembl
RGD		 PMID:17522300 GO_REF:0000107 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674 		JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO MGI:5308811|MGI:6506267 (PMID:22101068), (PMID:31386652) RGD PMID:22101068 PMID:31386652 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186 		JBrowse link
G Tubb2a tubulin, beta 2A class IIa involved_in IEA
ISO		 GO_REF:0000107
MGI:6506264 (PMID:31386652)		 Ensembl
RGD		 PMID:31386652 GO_REF:0000107 NCBI chr17:30,796,842...30,800,713
Ensembl chr17:30,747,503...30,800,714 		JBrowse link
G Tubb2b tubulin, beta 2B class IIb involved_in IEA
ISO		 GO_REF:0000107
MGI:6506266 (PMID:31386652)		 Ensembl
RGD		 PMID:31386652 GO_REF:0000107 NCBI chr17:30,747,734...30,750,781
Ensembl chr17:30,747,734...30,750,638 		JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:34235142) RGD PMID:34235142 NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924 		JBrowse link
G Vldlr very low density lipoprotein receptor IEP RGD PMID:20368265 RGD:2324624 NCBI chr 1:224,813,539...224,850,400
Ensembl chr 1:224,814,377...224,845,920 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065|MGI:6102912 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739 		JBrowse link
G Wdr62 WD repeat domain 62 involved_in ISO (PMID:20729831) RGD PMID:20729831 NCBI chr 1:85,491,531...85,530,643
Ensembl chr 1:85,491,533...85,530,637 		JBrowse link
G Xab2 XPA binding protein 2 IEP RGD PMID:12801913 RGD:634609 NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692 		JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2667341 (PMID:12796778)		 Ensembl
RGD		 PMID:12796778 GO_REF:0000107 NCBI chr10:60,584,665...60,622,352
Ensembl chr10:60,584,652...60,671,589 		JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (PMID:19409883) RGD PMID:19409883 NCBI chr13:89,439,501...89,447,958
Ensembl chr13:89,439,420...89,448,862 		JBrowse link
cerebral cortex GABAergic interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit part_of IEP RGD PMID:17046198 RGD:152995358 NCBI chr15:40,342,317...40,358,601
Ensembl chr15:40,342,317...40,358,601 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2180784 (PMID:23258346) RGD PMID:23258346 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Rac3 Rac family small GTPase 3 acts_upstream_of_or_within ISO MGI:97845 (PMID:23258346) RGD PMID:23258346 NCBI chr10:106,002,808...106,005,243
Ensembl chr10:105,993,087...106,005,260 		JBrowse link
cerebral cortex GABAergic interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 involved_in ISO (PMID:12050665) RGD PMID:12050665 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Dlx1 distal-less homeobox 1 acts_upstream_of_or_within ISO MGI:94902 (PMID:15028753) RGD PMID:15028753 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780 		JBrowse link
G Dlx2 distal-less homeobox 2 acts_upstream_of_or_within ISO MGI:94901 (PMID:15028753) RGD PMID:15028753 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857494|MGI:3653645 (PMID:15028753), (PMID:18786356)		 Ensembl
RGD		 PMID:15028753 PMID:18786356 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
cerebral cortex GABAergic interneuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:94902 (PMID:17678855)		 Ensembl
RGD		 PMID:17678855 GO_REF:0000107 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780 		JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:94901 (PMID:17678855)		 Ensembl
RGD		 PMID:17678855 GO_REF:0000107 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597 		JBrowse link
cerebral cortex GABAergic interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2679972 (PMID:17460091)		 Ensembl
RGD		 PMID:17460091 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142 		JBrowse link
G Cntn2 contactin 2 acts_upstream_of_or_within ISO (PMID:11714688) RGD PMID:11714688 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887 		JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857875 (PMID:17409246)		 Ensembl
RGD		 PMID:17409246 GO_REF:0000107 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:1857875 (PMID:17409246) RGD PMID:17409246 NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:3046867 (PMID:21338885) RGD PMID:21338885 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554 		JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:3702518 (PMID:17376969) RGD PMID:17376969 NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061 		JBrowse link
cerebral cortex neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C11h21orf91 similar to human chromosome 21 open reading frame 91 involved_in ISO (MGI:5908509|PMID:27404227) RGD PMID:27404227 MGI:5908509 NCBI chr11:17,229,129...17,262,307
Ensembl chr11:17,229,138...17,262,483 		JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5532595|PMID:23948251)		 UniProt
RGD		 PMID:23948251 GO_REF:0000024 MGI:5532595 NCBI chr 5:162,848,273...162,898,997
Ensembl chr 5:162,848,394...162,896,291 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 acts_upstream_of_or_within ISO (PMID:32245946) RGD PMID:32245946 NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:2682313 (PMID:23178126) RGD PMID:23178126 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613 		JBrowse link
G Eomes eomesodermin involved_in ISO (MGI:3831469|PMID:18940588) RGD PMID:18940588 MGI:3831469 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:3046867 (PMID:21338885) RGD PMID:21338885 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554 		JBrowse link
G Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 acts_upstream_of_or_within ISO MGI:5302017 (PMID:22951639) RGD PMID:22951639 NCBI chr 1:153,679,718...153,761,452
Ensembl chr 1:153,679,718...153,761,446 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857299 (PMID:11297820)		 Ensembl
RGD		 PMID:11297820 GO_REF:0000107 NCBI chr  X:132,736,175...132,768,149
Ensembl chr  X:132,736,096...132,768,154 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO MGI:3505549 (PMID:15469968) RGD PMID:15469968 NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470 		JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:108067 (PMID:18339674) RGD PMID:18339674 NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO MGI:1306803|MGI:1857494 (PMID:18339674) RGD PMID:18339674 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350 (PMID:12902391), (PMID:15950290) RGD PMID:12902391 PMID:15950290 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:27160703) RGD PMID:27160703 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 IMP RGD PMID:16144905 RGD:1601501 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO MGI:2154454 (PMID:9288097) RGD PMID:9288097 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431 		JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (MGI:6152283|PMID:27399968) RGD PMID:27399968 MGI:6152283 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192 		JBrowse link
G Tox thymocyte selection-associated high mobility group box involved_in ISO (MGI:5632052|PMID:25527292) RGD PMID:25527292 MGI:5632052 NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272 		JBrowse link
G Zfp335 zinc finger protein 335 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5470136|MGI:95387 (PMID:23178126)		 Ensembl
RGD		 PMID:23178126 GO_REF:0000107 NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054 		JBrowse link
cerebral cortex radial glia-guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3796260|PMID:18509043)		 UniProt
RGD		 PMID:18509043 GO_REF:0000024 MGI:3796260 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856282 (PMID:9232833) RGD PMID:9232833 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G P2ry12 purinergic receptor P2Y12 involved_in IMP PMID:18183622
PMID:17299767		 ARUK-UCL PMID:18183622 PMID:17299767 RGD:13673786, RGD:13673751 NCBI chr 2:143,481,468...143,523,340
Ensembl chr 2:143,481,430...143,523,361 		JBrowse link
G Rtn4 reticulon 4 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:4461842|PMID:20093372)		 UniProt
Ensembl
RGD		 PMID:20093372 GO_REF:0000024 GO_REF:0000107 MGI:4461842 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:6102912 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739 		JBrowse link
cerebral cortex radially oriented cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc141 coiled-coil domain containing 141 acts_upstream_of_or_within ISO (PMID:20956536) RGD PMID:20956536 NCBI chr 3:61,948,614...62,109,968
Ensembl chr 3:61,948,646...62,110,079 		JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456 		JBrowse link
G Cul5 cullin 5 acts_upstream_of_or_within ISO (PMID:24210661) RGD PMID:24210661 NCBI chr 8:54,012,963...54,066,751
Ensembl chr 8:54,016,006...54,066,666 		JBrowse link
G Dab1 DAB adaptor protein 1 acts_upstream_of_or_within IMP
ISO		 MGI:1337096|MGI:1861918 (PMID:24210661), (PMID:9338785) RGD PMID:9338785 PMID:24210661 PMID:18160654 RGD:2324689 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552 		JBrowse link
G Disc1 DISC1 scaffold protein involved_in ISO (MGI:4821185|PMID:20624590) RGD PMID:20624590 MGI:4821185 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778 		JBrowse link
G Dixdc1 DIX domain containing 1 involved_in ISO
IEA		 (MGI:4821185|PMID:20624590)
GO_REF:0000107		 RGD
Ensembl		 PMID:20624590 GO_REF:0000107 MGI:4821185 NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090 		JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3849742 (PMID:19398581)		 Ensembl
RGD		 PMID:19398581 GO_REF:0000107 NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800 		JBrowse link
G Fut10 fucosyltransferase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23986452)		 Ensembl
RGD		 PMID:23986452 GO_REF:0000107 NCBI chr16:60,868,761...60,958,762
Ensembl chr16:60,877,952...60,958,683 		JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:3702518 (PMID:17376969) RGD PMID:17376969 NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061 		JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4878863 (PMID:21104742)		 Ensembl
RGD		 PMID:21104742 GO_REF:0000107 NCBI chr20:7,900,327...7,964,309
Ensembl chr20:7,904,358...7,963,471 		JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in ISO
IEA		 (MGI:4821185|PMID:20624590)
GO_REF:0000107		 RGD
Ensembl		 PMID:20624590 GO_REF:0000107 MGI:4821185 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907 		JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:102564 (PMID:12130536)		 Ensembl
RGD		 PMID:12130536 GO_REF:0000107 NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838 		JBrowse link
G Pou3f3 POU class 3 homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101895 (PMID:12130536)		 Ensembl
RGD		 PMID:12130536 GO_REF:0000107 NCBI chr 9:44,945,872...44,948,998
Ensembl chr 9:44,945,872...44,948,992 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:2663662 (PMID:17409253) RGD PMID:17409253 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within ISO MGI:108554 (PMID:24210661) RGD PMID:24210661 NCBI chr 8:97,038,845...97,048,080
Ensembl chr 8:97,038,840...97,047,824 		JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (PMID:24210661) RGD PMID:24210661 NCBI chr10:82,352,159...82,388,829
Ensembl chr10:82,351,680...82,388,830 		JBrowse link
cerebral cortex regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:24531968)		 Ensembl
RGD		 PMID:24531968 GO_REF:0000107 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108 		JBrowse link
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:3707409 (PMID:23431145) RGD PMID:23431145 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510 		JBrowse link
G Dmrta2 DMRT-like family A2 acts_upstream_of_or_within ISO MGI:5527461 (PMID:22923088), (PMID:23056351) RGD PMID:22923088 PMID:23056351 NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:95388 (PMID:15147765) RGD PMID:15147765 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858|MGI:95387 (PMID:12764040), (PMID:15147765) RGD PMID:12764040 PMID:15147765 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594 		JBrowse link
G Eomes eomesodermin involved_in
acts_upstream_of_or_within		 ISO (PMID:30186101)
MGI:2176173|MGI:3802572 (PMID:23431145)		 RGD PMID:23431145 PMID:30186101 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 acts_upstream_of_or_within ISO MGI:3521756 (PMID:17828260) RGD PMID:17828260 NCBI chr 2:8,040,375...8,050,123
Ensembl chr 2:8,040,377...8,050,123 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:30186101)
MGI:1856155 (PMID:12764040), (PMID:23431145)		 Ensembl
RGD		 PMID:12764040 PMID:23431145 PMID:30186101 GO_REF:0000107 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Tra2b transformer 2 beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176173|MGI:4450919 (PMID:24586484)		 Ensembl
RGD		 PMID:24586484 GO_REF:0000107 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249 		JBrowse link
cerebral cortex tangential migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2679972 (PMID:17460091)		 Ensembl
RGD		 PMID:17460091 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142 		JBrowse link
G Fbxo45 F-box protein 45 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3849742 (PMID:19398581)		 Ensembl
RGD		 PMID:19398581 GO_REF:0000107 NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800 		JBrowse link
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:3702518 (PMID:17376969) RGD PMID:17376969 NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061 		JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
MGI:1856398 (PMID:16901480)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:16901480 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit1 slit guidance ligand 1 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127 		JBrowse link
G Slit2 slit guidance ligand 2 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948 		JBrowse link
G Slit3 slit guidance ligand 3 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634 		JBrowse link
chemorepulsion involved in interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrg1 neuregulin 1 acts_upstream_of_or_within ISO (PMID:22376909) RGD PMID:22376909 NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G Nrg3 neuregulin 3 acts_upstream_of_or_within ISO (PMID:22376909) RGD PMID:22376909 NCBI chr16:14,229,270...15,352,505
Ensembl chr16:14,235,157...15,352,368 		JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 involved_in ISO (PMID:15207848) RGD PMID:15207848 NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203 		JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO
IEA		 (PMID:15207848)
GO_REF:0000107		 RGD
Ensembl		 PMID:15207848 GO_REF:0000107 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948 		JBrowse link
cochlear nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857134 (PMID:11027399)		 Ensembl
RGD		 PMID:11027399 GO_REF:0000107 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Scrib scribble planar cell polarity protein acts_upstream_of_or_within ISO MGI:2139764 (PMID:20215345) RGD PMID:20215345 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331 		JBrowse link
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO MGI:2145950|MGI:4440621 (PMID:20215345) RGD PMID:20215345 NCBI chr 2:218,562,670...218,632,753
Ensembl chr 2:218,562,676...218,632,699 		JBrowse link
G Slc4a7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO MGI:2682641 (PMID:12808454) RGD PMID:12808454 NCBI chr15:10,585,307...10,664,780
Ensembl chr15:10,588,979...10,664,781 		JBrowse link
commitment of neuronal cell to specific neuron type in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (PMID:22991444) RGD PMID:22991444 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO MGI:2679336 (PMID:23144223) RGD PMID:23144223 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:3046867 (PMID:21338885) RGD PMID:21338885 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:4818492 (PMID:22991444) RGD PMID:22991444 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856158 (PMID:11124115)		 Ensembl
RGD		 PMID:11124115 GO_REF:0000107 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Tbr1 T-box brain transcription factor 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2679336 (PMID:23144223)		 GO_Central
RGD		 PMID:23144223 GO_REF:0000033 NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041 		JBrowse link
corpus callosum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16-like 1 acts_upstream_of_or_within ISO MGI:4432181 (PMID:29078390) RGD PMID:29078390 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1928281|MGI:3043819 (PMID:18032654)		 Ensembl
RGD		 PMID:18032654 GO_REF:0000107 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Coro1c coronin 1C acts_upstream_of_or_within ISO MGI:4419168 (PMID:29078390) RGD PMID:29078390 NCBI chr12:42,713,024...42,785,179
Ensembl chr12:42,712,991...42,785,179 		JBrowse link
G Dcc DCC netrin 1 receptor IEP RGD PMID:22473424 RGD:10411906 NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740 		JBrowse link
G Dmxl2 Dmx-like 2 acts_upstream_of_or_within ISO MGI:4432280 (PMID:29078390) RGD PMID:29078390 NCBI chr 8:54,741,164...54,884,948
Ensembl chr 8:54,741,160...54,885,161 		JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:84499|PMID:8947026) RGD PMID:8947026 MGI:84499 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
G Ephb3 Eph receptor B3 involved_in ISO (MGI:84499|PMID:8947026) RGD PMID:8947026 MGI:84499 NCBI chr11:79,840,668...79,859,345
Ensembl chr11:79,840,668...79,859,370 		JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:6102914 (PMID:29078390) RGD PMID:29078390 NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312 		JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682 		JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400 		JBrowse link
G Kcna3 potassium voltage-gated channel subfamily A member 3 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:194,632,106...194,634,059
Ensembl chr 2:194,632,196...194,650,138 		JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 1:96,902,953...96,944,744
Ensembl chr 1:96,902,953...96,944,744 		JBrowse link
G Kcnc3 potassium voltage-gated channel subfamily C member 3 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 1:95,080,960...95,095,165
Ensembl chr 1:95,080,960...95,095,160 		JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:195,063,967...195,100,244
Ensembl chr 2:195,071,769...195,099,233 		JBrowse link
G Kif21b kinesin family member 21B acts_upstream_of_or_within ISO MGI:4364527 (PMID:29078390) RGD PMID:29078390 NCBI chr13:47,576,129...47,626,112
Ensembl chr13:47,576,160...47,626,127 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 IEP RGD PMID:9753172 RGD:2317716 NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895 		JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 involved_in ISO (MGI:6359541|PMID:31174389) RGD PMID:31174389 MGI:6359541 NCBI chr12:21,293,637...21,299,319
Ensembl chr12:21,293,645...21,299,272 		JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2158734 (PMID:15842738)		 Ensembl
RGD		 PMID:15842738 GO_REF:0000107 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Rtn4r reticulon 4 receptor involved_in ISS
ISO		 GO_REF:0000024
(MGI:5824191|PMID:27339102)		 UniProt
RGD		 PMID:27339102 GO_REF:0000024 MGI:5824191 NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466 		JBrowse link
G Rtn4rl1 reticulon 4 receptor-like 1 involved_in ISO
IEA		 (MGI:5824191|PMID:27339102)
GO_REF:0000107		 RGD
Ensembl		 PMID:27339102 GO_REF:0000107 MGI:5824191 NCBI chr10:60,043,246...60,116,977
Ensembl chr10:60,043,002...60,116,978 		JBrowse link
G Rtn4rl2 reticulon 4 receptor-like 2 involved_in ISO (MGI:5824191|PMID:27339102) RGD PMID:27339102 MGI:5824191 NCBI chr 3:69,954,557...69,971,108
Ensembl chr 3:69,955,169...69,971,488 		JBrowse link
G Ryk receptor-like tyrosine kinase involved_in ISO
ISS		 (MGI:3625635|PMID:16723543)
GO_REF:0000024		 RGD
UniProt		 PMID:16723543 GO_REF:0000024 MGI:3625635 NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698 		JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 3:50,302,781...50,437,504
Ensembl chr 3:50,302,877...50,437,214 		JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO MGI:4362969 (PMID:24284070) RGD PMID:24284070 NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924 		JBrowse link
G Wdr37 WD repeat domain 37 acts_upstream_of_or_within ISO MGI:4452651 (PMID:29078390) RGD PMID:29078390 NCBI chr17:61,637,258...61,703,677
Ensembl chr17:61,637,258...61,703,677 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:4433065 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739 		JBrowse link
G Wdr89 WD repeat domain 89 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4944354 (PMID:29078390)		 Ensembl
RGD		 PMID:29078390 GO_REF:0000107 NCBI chr 6:94,350,468...94,382,085
Ensembl chr 6:94,350,303...94,382,026 		JBrowse link
corpus callosum morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family, member e22 acts_upstream_of_or_within ISO MGI:2684610|MGI:4440742|MGI:4440744 (PMID:22284184) RGD PMID:22284184 NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510 		JBrowse link
G Grcc10 gene rich cluster, C10 gene involved_in ISO (PMID:23453665), (PMID:23453666), (PMID:23633300), (PMID:24798461) RGD PMID:23453665 PMID:23453666 PMID:23633300 PMID:24798461 NCBI chr 4:157,551,276...157,552,924 JBrowse link
G Nin ninein acts_upstream_of_or_within ISO MGI:1344407 (PMID:25741725) RGD PMID:25741725 NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (PMID:9063735) RGD PMID:9063735 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Prdm8 PR/SET domain 8 acts_upstream_of_or_within ISO MGI:5315763 (PMID:22284184) RGD PMID:22284184 NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993 		JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in ISO (PMID:23932106) RGD PMID:23932106 NCBI chr 5:131,897,250...131,943,953
Ensembl chr 5:131,897,275...131,943,904 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4867728 (PMID:21055390)		 Ensembl
RGD		 PMID:21055390 GO_REF:0000107 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2668659 (PMID:25741725) RGD PMID:25741725 NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157 		JBrowse link
corticotropin hormone secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:9463347)		 Ensembl
RGD		 PMID:9463347 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:9463347) RGD PMID:9463347 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:9463347) RGD PMID:9463347 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
dentate gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atat1 alpha tubulin acetyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4453011 (PMID:23720746)		 Ensembl
RGD		 PMID:23720746 GO_REF:0000107 NCBI chr20:2,844,595...2,857,809
Ensembl chr20:2,844,616...2,861,964 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO MGI:1856982 (PMID:30498428) RGD PMID:30498428 NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308 		JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO MGI:3525505 (PMID:20020054) RGD PMID:20020054 NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628 		JBrowse link
G Csf1r colony stimulating factor 1 receptor IMP RGD PMID:33450391 RGD:126781687 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415 		JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2181426|MGI:3707260 (PMID:17360497)		 Ensembl
RGD		 PMID:17360497 GO_REF:0000107 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858 (PMID:10729342) RGD PMID:10729342 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:3046867 (PMID:16971467) RGD PMID:16971467 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5904238|PMID:28204491)		 UniProt
Ensembl
RGD		 PMID:28204491 GO_REF:0000024 GO_REF:0000107 MGI:5904238 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Fxr2 FMR1 autosomal homolog 2 involved_in ISO (MGI:5141571|PMID:21658585) RGD PMID:21658585 MGI:5141571 NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964 		JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO MGI:98248 (PMID:16464983) RGD PMID:16464983 NCBI chr 3:168,194,776...168,253,831
Ensembl chr 3:168,195,357...168,275,071 		JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:2179048|MGI:2386464 (PMID:18297065) RGD PMID:18297065 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:1856965 (PMID:21970971) RGD PMID:21970971 NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1933764 (PMID:10631168)		 Ensembl
RGD		 PMID:10631168 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (PMID:1638738) RGD PMID:1638738 NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253 		JBrowse link
G Mdk midkine involved_in ISO
IEA		 (MGI:2178952|PMID:10096022)
GO_REF:0000107		 RGD
Ensembl		 PMID:10096022 GO_REF:0000107 MGI:2178952 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
G Mef2c myocyte enhancer factor 2C IEP RGD PMID:18949272 RGD:5131610 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Neurod1 neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:106593 (PMID:10804213)
(MGI:1352314|PMID:10639171), (MGI:2159022|PMID:10398678)		 UniProt
RGD		 PMID:10398678 PMID:10639171 PMID:10804213 GO_REF:0000024 MGI:1352314 MGI:2159022 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649 		JBrowse link
G Neurod6 neuronal differentiation 6 acts_upstream_of_or_within ISO MGI:1339708 (PMID:10804213) RGD PMID:10804213 NCBI chr 4:84,846,659...84,849,905
Ensembl chr 4:84,846,231...84,849,999 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350|MGI:2181426 (PMID:12527005), (PMID:17953618) RGD PMID:12527005 PMID:17953618 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Pianp PILR alpha associated neural protein acts_upstream_of_or_within ISO (PMID:31511635) RGD PMID:31511635 NCBI chr 4:157,796,425...157,804,842
Ensembl chr 4:157,798,808...157,804,842 		JBrowse link
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3623521 (PMID:21970971)		 Ensembl
RGD		 PMID:21970971 GO_REF:0000107 NCBI chr 5:129,634,274...129,644,150
Ensembl chr 5:129,634,294...129,644,149 		JBrowse link
G Pomt2 protein-O-mannosyltransferase 2 acts_upstream_of_or_within ISO MGI:5302103 (PMID:21970971) RGD PMID:21970971 NCBI chr 6:106,755,462...106,794,849
Ensembl chr 6:106,755,462...106,794,849 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) RGD PMID:20808958 MGI:4849596 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3759727|PMID:17706614) RGD PMID:17706614 MGI:3759727 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Reln reelin IMP RGD PMID:15459104 RGD:2317799 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1309503 (PMID:16464983)		 Ensembl
RGD		 PMID:16464983 GO_REF:0000107 NCBI chr 3:50,302,781...50,437,504
Ensembl chr 3:50,302,877...50,437,214 		JBrowse link
G Sct secretin acts_upstream_of_or_within ISO MGI:3815315 (PMID:21159798) RGD PMID:21159798 NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176256|MGI:2179048 (PMID:18297065)		 Ensembl
RGD		 PMID:18297065 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Tmem108 transmembrane protein 108 involved_in ISO (MGI:5825380|PMID:28096412) RGD PMID:28096412 MGI:5825380 NCBI chr 8:104,066,081...104,360,172
Ensembl chr 8:104,066,078...104,360,094 		JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO MGI:3617352 (PMID:21041996) RGD PMID:21041996 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186 		JBrowse link
G Vps13b vacuolar protein sorting 13 homolog B acts_upstream_of_or_within ISO (PMID:37573958) RGD PMID:37573958 NCBI chr 7:66,557,862...67,128,429
Ensembl chr 7:66,558,471...67,128,429 		JBrowse link
diencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sema5a semaphorin 5A involved_in IMP PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084 		JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO MGI:98953 (PMID:18094027) RGD PMID:18094027 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:102764 (PMID:18094027) RGD PMID:18094027 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
diencephalon morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otx1 orthodenticle homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97451 (PMID:20816794)		 Ensembl
RGD		 PMID:20816794 GO_REF:0000107 NCBI chr14:96,082,146...96,089,161
Ensembl chr14:96,082,151...96,089,086 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:97450 (PMID:20816794) RGD PMID:20816794 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:2181440|MGI:3052123 (PMID:15240551) RGD PMID:15240551 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2429693 (PMID:15677725)		 Ensembl
RGD		 PMID:15677725 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:2663662 (PMID:17409253) RGD PMID:17409253 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srgap2 SLIT-ROBO Rho GTPase activating protein 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4366584|PMID:19737524)		 UniProt
RGD		 PMID:19737524 GO_REF:0000024 MGI:4366584 NCBI chr13:42,745,956...42,967,091
Ensembl chr13:42,745,947...42,967,058 		JBrowse link
facial nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:3720850 (PMID:21533046)		 Ensembl
RGD		 PMID:21533046 GO_REF:0000107 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:1857504 (PMID:8102800) RGD PMID:8102800 NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:1857824 (PMID:8898234) RGD PMID:8898234 NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 involved_in ISO (MGI:4452541|PMID:20410112) RGD PMID:20410112 MGI:4452541 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in ISO (MGI:4452541|PMID:20410112) RGD PMID:20410112 MGI:4452541 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
forebrain anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within ISO MGI:1859823 (PMID:16971467) RGD PMID:16971467 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:1920441 (PMID:16971467) RGD PMID:16971467 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554 		JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO MGI:2450901|MGI:98953 (PMID:18094027) RGD PMID:18094027 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:102764 (PMID:18094027) RGD PMID:18094027 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
forebrain astrocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kras KRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO MGI:2429948 (PMID:22577135) RGD PMID:22577135 NCBI chr 4:178,185,418...178,218,484 JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:1857444 (PMID:15944386)
GO_REF:0000024		 Ensembl
RGD
HGNC-UCL		 PMID:15944386 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857996 (PMID:8543156)		 Ensembl
RGD		 PMID:8543156 GO_REF:0000107 NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838 		JBrowse link
forebrain cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axl Axl receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:104294 (PMID:18787040) RGD PMID:18787040 NCBI chr 1:81,265,088...81,296,278
Ensembl chr 1:81,265,088...81,296,265 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858 (PMID:10729342) RGD PMID:10729342 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
MGI:1347244 (PMID:18787040)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:18787040 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:106,777,686...106,797,154
Ensembl chr 3:106,777,635...106,797,142 		JBrowse link
forebrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1857891 (PMID:16368932) RGD PMID:16368932 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within ISO MGI:1888997 (PMID:9216040) RGD PMID:9216040 NCBI chr 7:25,494,143...25,579,540
Ensembl chr 7:25,494,609...25,579,540 		JBrowse link
G Aplp1 amyloid beta precursor like protein 1 acts_upstream_of_or_within ISO MGI:88047|MGI:88059 (PMID:15385965) RGD PMID:15385965 NCBI chr 1:85,696,880...85,707,215
Ensembl chr 1:85,696,882...85,707,155 		JBrowse link
G Aplp2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO MGI:88046|MGI:88059 (PMID:15385965), (PMID:15689559) RGD PMID:15385965 PMID:15689559 NCBI chr 8:29,599,230...29,662,311
Ensembl chr 8:29,599,230...29,661,855 		JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2154522|MGI:2154535|MGI:88046|MGI:88047 (PMID:10200318), (PMID:15385965), (PMID:8001115)		 Ensembl
RGD		 PMID:8001115 PMID:10200318 PMID:15385965 GO_REF:0000107 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561 		JBrowse link
G Arhgap35 Rho GTPase activating protein 35 acts_upstream_of_or_within ISO MGI:2448591 (PMID:11044403) RGD PMID:11044403 NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298 		JBrowse link
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO MGI:5469314 (PMID:23129809) RGD PMID:23129809 NCBI chr 5:145,908,173...145,981,552
Ensembl chr 5:145,908,181...145,985,564 		JBrowse link
G Arx aristaless related homeobox acts_upstream_of_or_within ISO MGI:2429693 (PMID:12379852) RGD PMID:12379852 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142 		JBrowse link
G Atrx ATRX, chromatin remodeler involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3528480 (PMID:15668733)		 Ensembl
RGD		 PMID:15668733 GO_REF:0000107 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI:1857137|MGI:2137520 (PMID:14681194), (PMID:9268572) RGD PMID:9268572 PMID:14681194 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Cckar cholecystokinin A receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3051882 (PMID:15152034)		 Ensembl
RGD		 PMID:15152034 GO_REF:0000107 NCBI chr14:57,292,397...57,300,747
Ensembl chr14:57,292,397...57,300,747 		JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IEP RGD PMID:16516309 RGD:4890442 NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1861809 (PMID:17694053) RGD PMID:17694053 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Chrd chordin acts_upstream_of_or_within
involved_in		 ISO MGI:2157350 (PMID:12397106)
MGI:104327|MGI:1313268 (PMID:10688202), (PMID:12397106)		 RGD PMID:10688202 PMID:12397106 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase IEP RGD PMID:16876328 RGD:6483359 NCBI chr10:85,511,164...85,517,723
Ensembl chr10:85,511,160...85,517,720 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:2148567|MGI:2176173 (PMID:15708565) RGD PMID:15708565 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dclk1 doublecortin-like kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3617379 (PMID:16387639)		 Ensembl
RGD		 PMID:16387639 GO_REF:0000107 NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO MGI:95841 (PMID:17127040) RGD PMID:17127040 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Dlc1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO MGI:3529997 (PMID:15710412) RGD PMID:15710412 NCBI chr16:55,246,716...55,671,441
Ensembl chr16:55,291,584...55,671,439 		JBrowse link
G Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 IEP RGD PMID:9878698 RGD:10059325 NCBI chr19:24,522,731...24,526,419
Ensembl chr19:24,522,717...24,526,458 		JBrowse link
G Draxin dorsal inhibitory axon guidance protein involved_in ISO
IBA		 (MGI:3832346|PMID:19150847)
GO_REF:0000033		 RGD
GO_Central		 PMID:19150847 GO_REF:0000033 MGI:3832346 NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483 		JBrowse link
G Drd2 dopamine receptor D2 IMP RGD PMID:17175142 RGD:2311572 NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
G Dync2h1 dynein cytoplasmic 2 heavy chain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16229832)		 Ensembl
RGD		 PMID:16229832 GO_REF:0000107 NCBI chr 8:4,189,067...4,412,183
Ensembl chr 8:4,189,257...4,412,183 		JBrowse link
G E2f1 E2F transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857424 (PMID:15525772)		 Ensembl
RGD		 PMID:15525772 GO_REF:0000107 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:2148858|MGI:95387|MGI:97451 (PMID:15294144), (PMID:15917450) RGD PMID:15294144 PMID:15917450 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594 		JBrowse link
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within ISO (PMID:16540508) RGD PMID:16540508 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078 		JBrowse link
G Fezf2 Fez family zinc finger 2 acts_upstream_of_or_within ISO MGI:3046867 (PMID:15188439), (PMID:16284245) RGD PMID:15188439 PMID:16284245 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:2135676 (PMID:15708559) RGD PMID:15708559 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO MGI:1857771|MGI:1932522 (PMID:12151532), (PMID:14566948), (PMID:14704420), (PMID:7605629) RGD PMID:7605629 PMID:12151532 PMID:14566948 PMID:14704420 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607 		JBrowse link
G Foxp1 forkhead box P1 IEP RGD PMID:18561326 RGD:11561932 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Foxp2 forkhead box P2 IEP RGD PMID:12815709 RGD:11536004 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683 		JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within ISO MGI:3521833 (PMID:16239343) RGD PMID:16239343 NCBI chr 7:52,711,255...52,792,738
Ensembl chr 7:52,711,257...52,792,743 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:98397 (PMID:15073522), (PMID:16162939)		 Ensembl
RGD		 PMID:15073522 PMID:16162939 GO_REF:0000107 NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:16168404) RGD PMID:16168404 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gnao1 G protein subunit alpha o1 IEP RGD PMID:8746812 RGD:2302010 NCBI chr19:11,034,874...11,192,531
Ensembl chr19:11,035,956...11,192,493 		JBrowse link
G Gsc goosecoid homeobox acts_upstream_of_or_within ISO MGI:1329040 (PMID:17127040) RGD PMID:17127040 NCBI chr 6:123,388,072...123,390,111
Ensembl chr 6:123,388,072...123,390,111 		JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO MGI:1931124 (PMID:17360769), (PMID:24520934), (PMID:9620767) RGD PMID:9620767 PMID:17360769 PMID:24520934 NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:2177762|MGI:2449914 (PMID:10804184), (PMID:11291863), (PMID:15459110) RGD PMID:10804184 PMID:11291863 PMID:15459110 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IEP RGD PMID:9878698 RGD:10059325 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259 		JBrowse link
G Htra2 HtrA serine peptidase 2 acts_upstream_of_or_within ISO MGI:3512633 (PMID:15509788) RGD PMID:15509788 NCBI chr 4:115,556,914...115,560,202
Ensembl chr 4:115,556,916...115,560,095 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:1932522|MGI:3710185 (PMID:28291836) RGD PMID:28291836 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO MGI:2158690 (PMID:15841184), (PMID:16467156) RGD PMID:15841184 PMID:16467156 NCBI chr14:86,255,065...86,340,839
Ensembl chr14:86,255,065...86,342,416 		JBrowse link
G Itgam integrin subunit alpha M involved_in ISO (MGI:3812233|PMID:18685038) RGD PMID:18685038 MGI:3812233 NCBI chr 1:182,659,047...182,709,501
Ensembl chr 1:182,659,000...182,709,503 		JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 IEP RGD PMID:22473424 RGD:10411906 NCBI chr 2:195,063,967...195,100,244
Ensembl chr 2:195,071,769...195,099,233 		JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:1932522|MGI:2386464|MGI:2386570|MGI:2686837 (PMID:28291836) RGD PMID:28291836 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191 		JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1931859 (PMID:15623804)		 Ensembl
RGD		 PMID:15623804 GO_REF:0000107 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:3043026 (PMID:15384171) RGD PMID:15384171 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3053053|MGI:3527900 (PMID:12897243), (PMID:15572149)		 Ensembl
RGD		 PMID:12897243 PMID:15572149 GO_REF:0000107 NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO MGI:2158381 (PMID:17029558) RGD PMID:17029558 NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590 		JBrowse link
G Mrtfa myocardin related transcription factor A acts_upstream_of_or_within ISO MGI:3050795 (PMID:20534669) RGD PMID:20534669 NCBI chr 7:112,544,305...112,714,418
Ensembl chr 7:112,544,312...112,714,418 		JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within ISO MGI:2384495 (PMID:20534669) RGD PMID:20534669 NCBI chr10:1,116,315...1,278,106
Ensembl chr10:1,116,310...1,277,897 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:1933766 (PMID:15188430), (PMID:15217086) RGD PMID:15188430 PMID:15217086 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Myo1d myosin ID IEP RGD PMID:8034741 RGD:633383 NCBI chr10:65,489,153...65,765,812
Ensembl chr10:65,489,154...65,766,349 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within ISO MGI:3765904 (PMID:17928865) RGD PMID:17928865 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319 		JBrowse link
G Nde1 nudE neurodevelopment protein 1 acts_upstream_of_or_within ISO MGI:3514026 (PMID:15473967) RGD PMID:15473967 NCBI chr10:839,788...883,946
Ensembl chr10:839,788...883,869 		JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:3589383|MGI:98297 (PMID:16020517) RGD PMID:16020517 NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191 		JBrowse link
G Neurog1 neurogenin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Neurog2 neurogenin 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2159010 (PMID:15328020)		 GO_Central
RGD		 PMID:15328020 GO_REF:0000033 NCBI chr 2:216,092,709...216,095,276
Ensembl chr 2:216,093,363...216,094,154 		JBrowse link
G Neurog3 neurogenin 3 involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:9130143 GO_REF:0000033, RGD:633362 NCBI chr20:30,079,780...30,081,262
Ensembl chr20:30,079,780...30,081,262 		JBrowse link
G Nfib nuclear factor I/B acts_upstream_of_or_within ISO MGI:3530139 (PMID:15632069) RGD PMID:15632069 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802571 (PMID:30503862) RGD PMID:30503862 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO (PMID:15494458) RGD PMID:15494458 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Nog noggin involved_in IEP
ISO		 MGI:104327|MGI:1313268 (PMID:10688202), (PMID:12397106) RGD PMID:10688202 PMID:12397106 PMID:14643011 RGD:1358324 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:1933835|MGI:99460 (PMID:16120638) RGD PMID:16120638 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Notch3 notch receptor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97363 (PMID:16120638)		 Ensembl
RGD		 PMID:16120638 GO_REF:0000107 NCBI chr 7:11,132,984...11,184,025
Ensembl chr 7:11,133,706...11,184,025 		JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 acts_upstream_of_or_within ISO (PMID:15548577) RGD PMID:15548577 NCBI chr 2:8,040,375...8,050,123
Ensembl chr 2:8,040,377...8,050,123 		JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within ISO (PMID:15548577) RGD PMID:15548577 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031 		JBrowse link
G Numb NUMB, endocytic adaptor protein acts_upstream_of_or_within ISO MGI:1932085 (PMID:14687546) RGD PMID:14687546 NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354 		JBrowse link
G Numbl NUMB-like, endocytic adaptor protein acts_upstream_of_or_within ISO MGI:2429686 (PMID:14687546) RGD PMID:14687546 NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IEP RGD PMID:22928023 RGD:9590181 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146 		JBrowse link
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within ISO MGI:95388|MGI:97451 (PMID:15201224), (PMID:15917450) RGD PMID:15201224 PMID:15917450 NCBI chr14:96,082,146...96,089,161
Ensembl chr14:96,082,151...96,089,086 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:1857510|MGI:2178753|MGI:3046841|MGI:95388|MGI:97450 (PMID:14625556), (PMID:15201223), (PMID:15917450) RGD PMID:14625556 PMID:15201223 PMID:15917450 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856155|MGI:1856158|MGI:3521718 (PMID:15514979), (PMID:15548580), (PMID:15758185) RGD PMID:15514979 PMID:15548580 PMID:15758185 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Pcdh9 protocadherin 9 IEP RGD PMID:17614211 RGD:2316761 NCBI chr15:69,340,108...70,237,531
Ensembl chr15:69,340,645...70,237,538 		JBrowse link
G Pou3f1 POU class 3 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3574356 (PMID:19527706)		 Ensembl
RGD		 PMID:19527706 GO_REF:0000107 NCBI chr 5:136,910,391...136,913,371
Ensembl chr 5:136,910,391...136,913,371 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17335037 RGD:10059646 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 acts_upstream_of_or_within ISO MGI:2181586 (PMID:16154207) RGD PMID:16154207 NCBI chr 1:228,409,605...229,638,794
Ensembl chr 1:228,408,947...229,639,080 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:109284 (PMID:15148382) RGD PMID:15148382 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1202717 (PMID:15148382) RGD PMID:15148382 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (MGI:3827084|PMID:19007770) RGD PMID:19007770 MGI:3827084 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Reln reelin acts_upstream_of_or_within ISO MGI:1856398 (PMID:17694053) RGD PMID:17694053 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:4437211 (PMID:20133625) RGD PMID:20133625 NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:104719 (PMID:16020517)		 UniProt
RGD		 PMID:16020517 GO_REF:0000024 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2176173|MGI:3605892 (PMID:16330018) RGD PMID:16330018 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Sox1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO MGI:2137412 (PMID:15882093) RGD PMID:15882093 NCBI chr16:77,135,577...77,139,592
Ensembl chr16:77,137,584...77,138,762 		JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in ISO
IBA		 (PMID:18285410)
GO_REF:0000033		 RGD
GO_Central		 PMID:18285410 GO_REF:0000033 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Sox3 SRY-box transcription factor 3 acts_upstream_of_or_within ISO MGI:3036671 (PMID:14981518) RGD PMID:14981518 NCBI chr  X:139,308,608...139,310,687
Ensembl chr  X:139,309,329...139,310,678 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:95602 (PMID:16162939) RGD PMID:16162939 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2158696 (PMID:20534669) RGD PMID:20534669 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Sstr1 somatostatin receptor 1 IEP RGD PMID:10805921 RGD:2325003 NCBI chr 6:75,832,292...75,836,806
Ensembl chr 6:75,832,530...75,836,802 		JBrowse link
G Sstr2 somatostatin receptor 2 IEP RGD PMID:10805921 RGD:2325003 NCBI chr10:98,664,204...98,671,370
Ensembl chr10:98,664,216...98,674,351 		JBrowse link
G Sstr3 somatostatin receptor 3 IEP RGD PMID:10805921 RGD:2325003 NCBI chr 7:110,092,563...110,109,043
Ensembl chr 7:110,092,575...110,099,769 		JBrowse link
G Sstr4 somatostatin receptor 4 IEP RGD PMID:10805921 RGD:2325003 NCBI chr 3:135,854,826...135,856,689
Ensembl chr 3:135,854,826...135,856,689 		JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (PMID:10385121) RGD PMID:10385121 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730 		JBrowse link
G Top2b DNA topoisomerase II beta acts_upstream_of_or_within ISO MGI:3521923 (PMID:12773624) RGD PMID:12773624 NCBI chr15:9,051,340...9,111,721
Ensembl chr15:9,051,341...9,112,085 		JBrowse link
G Tp73 tumor protein p73 acts_upstream_of_or_within ISO MGI:1859911 (PMID:15525772) RGD PMID:15525772 NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128 		JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within ISO MGI:5496675 (PMID:23141541) RGD PMID:23141541 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2686837|MGI:5587034 (PMID:28291836) RGD PMID:28291836 NCBI chr 3:50,861,367...50,935,880
Ensembl chr 3:50,861,367...50,935,903 		JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within ISO MGI:2655736|MGI:88180 (PMID:14681194), (PMID:15013800) RGD PMID:14681194 PMID:15013800 NCBI chr 9:105,533,116...105,567,460
Ensembl chr 9:105,533,136...105,567,479 		JBrowse link
G Tyrobp transmembrane immune signaling adaptor Tyrobp involved_in ISO (MGI:3812233|PMID:18685038) RGD PMID:18685038 MGI:3812233 NCBI chr 1:85,672,931...85,676,856
Ensembl chr 1:85,672,994...85,676,848 		JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5289759|PMID:21856776)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21856776 GO_REF:0000024 GO_REF:0000107 MGI:5289759 NCBI chr 4:116,195,528...116,219,597
Ensembl chr 4:116,195,528...116,219,594 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IEP RGD PMID:11731009 RGD:2325879 NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
G Zic1 Zic family member 1 involved_in ISO MGI:106676 (PMID:17507568) RGD PMID:17507568 NCBI chr 8:91,908,548...91,918,020
Ensembl chr 8:91,908,576...91,912,731 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:106683 (PMID:17507568) RGD PMID:17507568 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
G Zic5 Zic family member 5 acts_upstream_of_or_within ISO MGI:3574814 (PMID:15736266) RGD PMID:15736266 NCBI chr15:99,558,285...99,567,023
Ensembl chr15:99,560,323...99,567,035 		JBrowse link
forebrain dorsal/ventral pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (PMID:16613831) RGD PMID:16613831 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:10625551) RGD PMID:10625551 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (PMID:11060228), (PMID:11124115), (PMID:18701439) RGD PMID:11060228 PMID:11124115 PMID:18701439 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857494 (PMID:10393115), (PMID:11163262), (PMID:11830575)		 Ensembl
RGD		 PMID:10393115 PMID:11163262 PMID:11830575 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856155|MGI:1856158 (PMID:11050125), (PMID:11124115), (PMID:18701439), (PMID:24528677)		 Ensembl
RGD		 PMID:11050125 PMID:11124115 PMID:18701439 PMID:24528677 GO_REF:0000107 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (PMID:18791198) RGD PMID:18791198 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2152544 (PMID:19732765) RGD PMID:19732765 NCBI chr 3:50,861,367...50,935,880
Ensembl chr 3:50,861,367...50,935,903 		JBrowse link
forebrain generation of neurons term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:14715945) RGD PMID:14715945 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350 (PMID:9394001) RGD PMID:9394001 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
forebrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843 (PMID:16613831) RGD PMID:16613831 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Gak cyclin G associated kinase acts_upstream_of_or_within ISO MGI:2176173|MGI:5305733 (PMID:18434600) RGD PMID:18434600 NCBI chr14:1,089,853...1,164,098
Ensembl chr14:1,089,866...1,216,398 		JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO MGI:2386906 (PMID:10693795) RGD PMID:10693795 NCBI chr 6:31,171,495...31,182,484
Ensembl chr 6:31,178,119...31,182,447 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (PMID:9398437) RGD PMID:9398437 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105 		JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO MGI:1931124 (PMID:10882526), (PMID:9620767) RGD PMID:9620767 PMID:10882526 NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:4999724 (PMID:21445260) RGD PMID:21445260 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:3823090 (PMID:19036983) RGD PMID:19036983 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
MGI:2176055|MGI:2176057 (PMID:11297510)
GO_REF:0000107		 HGNC-UCL
RGD
Ensembl		 PMID:11297510 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393) RGD PMID:16675393 MGI:3629385 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5142377|PMID:11517919)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:11517919 GO_REF:0000024 GO_REF:0000107 MGI:5142377 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO MGI:6506267 (PMID:31386652) RGD PMID:31386652 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (MGI:4849324|PMID:21048919) RGD PMID:21048919 MGI:4849324 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
forebrain neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO (PMID:16798874) RGD PMID:16798874 NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1298218 (PMID:14715945)		 Ensembl
RGD		 PMID:14715945 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
forebrain neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 IMP induction of dopaminergic neurons in the rostral forebrain RGD PMID:9630220 RGD:2289424 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:21048141) RGD PMID:21048141 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Gnaq G protein subunit alpha q involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2151661 (PMID:15340067)		 Ensembl
RGD		 PMID:15340067 GO_REF:0000107 NCBI chr 1:213,425,631...213,671,947
Ensembl chr 1:213,424,465...213,667,672 		JBrowse link
G Lhx6 LIM homeobox 6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1096343 (PMID:15217369)		 GO_Central
RGD		 PMID:15217369 GO_REF:0000033 NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061 		JBrowse link
G Lhx8 LIM homeobox 8 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1306803 (PMID:15217369)		 GO_Central
RGD		 PMID:15217369 GO_REF:0000033 NCBI chr 2:243,244,958...243,269,624
Ensembl chr 2:243,244,961...243,269,416 		JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3848551|PMID:19453629)		 UniProt
RGD		 PMID:19453629 GO_REF:0000024 MGI:3848551 NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247 		JBrowse link
G Secisbp2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2181426|MGI:5583885 (PMID:24844465)		 Ensembl
RGD		 PMID:24844465 GO_REF:0000107 NCBI chr17:13,538,513...13,569,573
Ensembl chr17:13,538,513...13,569,523 		JBrowse link
G Sox1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO MGI:2137412 (PMID:15882093) RGD PMID:15882093 NCBI chr16:77,135,577...77,139,592
Ensembl chr16:77,137,584...77,138,762 		JBrowse link
G Tfap2a transcription factor AP-2 alpha acts_upstream_of_or_within ISO MGI:1888387 (PMID:10803593) RGD PMID:10803593 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 IDA RGD PMID:17936272 RGD:2314144 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IEA
ISO		 GO_REF:0000107
(MGI:5430247|PMID:22542597)		 Ensembl
RGD		 PMID:22542597 GO_REF:0000107 MGI:5430247 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415 		JBrowse link
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:94902 (PMID:11163262)		 Ensembl
RGD		 PMID:11163262 GO_REF:0000107 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780 		JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:94901 (PMID:11163262)		 Ensembl
RGD		 PMID:11163262 GO_REF:0000107 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597 		JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:2152620 (PMID:10325223) RGD PMID:10325223 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625 		JBrowse link
G Lhx8 LIM homeobox 8 acts_upstream_of_or_within ISO MGI:3603531 (PMID:15978004) RGD PMID:15978004 NCBI chr 2:243,244,958...243,269,624
Ensembl chr 2:243,244,961...243,269,416 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO MGI:1857494 (PMID:11163262) RGD PMID:11163262 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Otp orthopedia homeobox acts_upstream_of_or_within ISO MGI:2180541 (PMID:17481897) RGD PMID:17481897 NCBI chr 2:26,108,158...26,116,359
Ensembl chr 2:26,108,163...26,116,359 		JBrowse link
G Phlda1 pleckstrin homology-like domain, family A, member 1 IEP RGD PMID:10428057 RGD:70034 NCBI chr 7:46,967,433...46,969,637
Ensembl chr 7:46,967,409...46,969,861 		JBrowse link
G Pou3f4 POU class 3 homeobox 4 acts_upstream_of_or_within ISO (PMID:9889200) RGD PMID:9889200 NCBI chr  X:75,858,646...75,859,923
Ensembl chr  X:75,858,646...75,859,923 		JBrowse link
G Sox1 SRY-box transcription factor 1 acts_upstream_of_or_within ISO MGI:2137412 (PMID:15882093) RGD PMID:15882093 NCBI chr16:77,135,577...77,139,592
Ensembl chr16:77,137,584...77,138,762 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:2181440|MGI:3052123 (PMID:15240551) RGD PMID:15240551 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
forebrain neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx6 LIM homeobox 6 acts_upstream_of_or_within ISO MGI:108067 (PMID:18339674) RGD PMID:18339674 NCBI chr 3:19,432,439...19,456,268
Ensembl chr 3:19,433,494...19,456,061 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1306803|MGI:1857494 (PMID:18339674)		 Ensembl
RGD		 PMID:18339674 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO MGI:2176695 (PMID:19749747) RGD PMID:19749747 NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995 		JBrowse link
forebrain radial glial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856282 (PMID:9232833) RGD PMID:9232833 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IDA PMID:11399758 UniProt PMID:11399758 RGD:8554692 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IDA PMID:11399758 UniProt PMID:11399758 RGD:8554692 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1298218 (PMID:14715945)		 Ensembl
RGD		 PMID:14715945 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:96770 (PMID:14715945) RGD PMID:14715945 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (MGI:5927282|PMID:28965759) RGD PMID:28965759 MGI:5927282 NCBI chr 2:211,530,598...211,546,845
Ensembl chr 2:211,530,602...211,546,821 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5927282|PMID:28965759) RGD PMID:28965759 MGI:5927282 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041 		JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3802570 (PMID:27965439) RGD PMID:27965439 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO MGI:4950374 (PMID:22405202) RGD PMID:22405202 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
forebrain regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2443342 (PMID:10529425)		 UniProt
RGD		 PMID:10529425 GO_REF:0000024 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856621|MGI:99783 (PMID:10529425)		 Ensembl
RGD		 PMID:10529425 GO_REF:0000107 NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:3775846|MGI:3840448 (PMID:24528677) RGD PMID:24528677 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Wnt2b Wnt family member 2B involved_in ISO (PMID:15164427)
(MGI:4821941|PMID:15164427)		 RGD PMID:15164427 MGI:4821941 NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308 		JBrowse link
G Wnt7b Wnt family member 7B involved_in ISO (PMID:15164427)
(MGI:4821941|PMID:15164427)		 RGD PMID:15164427 MGI:4821941 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
forebrain ventricular zone progenitor cell division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dixdc1 DIX domain containing 1 involved_in ISO
IEA		 (MGI:4821185|PMID:20624590)
GO_REF:0000107		 RGD
Ensembl		 PMID:20624590 GO_REF:0000107 MGI:4821185 NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090 		JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:102564 (PMID:12130536)		 Ensembl
RGD		 PMID:12130536 GO_REF:0000107 NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838 		JBrowse link
G Pou3f3 POU class 3 homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101895 (PMID:12130536)		 Ensembl
RGD		 PMID:12130536 GO_REF:0000107 NCBI chr 9:44,945,872...44,948,998
Ensembl chr 9:44,945,872...44,948,992 		JBrowse link
formation of radial glial scaffolds term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ADP-ribosylation factor like GTPase 13B involved_in ISO (MGI:5528615|PMID:23817546) RGD PMID:23817546 MGI:5528615 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197 		JBrowse link
G Flna filamin A IMP RGD PMID:22076441 RGD:11564351 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2156945|MGI:2684610 (PMID:21185282)		 Ensembl
RGD		 PMID:21185282 GO_REF:0000107 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1298218 (PMID:14715945)		 Ensembl
RGD		 PMID:14715945 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:96770 (PMID:14715945) RGD PMID:14715945 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
fourth ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386445|MGI:3664764 (PMID:11283949), (PMID:16481398) RGD PMID:11283949 PMID:16481398 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165 		JBrowse link
globus pallidus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2679972 (PMID:17460091)		 Ensembl
RGD		 PMID:17460091 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142 		JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 IEP RGD PMID:10482766 RGD:9685780 NCBI chr 1:96,902,953...96,944,744
Ensembl chr 1:96,902,953...96,944,744 		JBrowse link
G Kcnc2 potassium voltage-gated channel subfamily C member 2 IEP RGD PMID:10482766 RGD:9685780 NCBI chr 7:47,700,035...47,883,979
Ensembl chr 7:47,700,288...47,883,968 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3653645 (PMID:20181579)
(PMID:11854319)		 Ensembl
RGD		 PMID:11854319 PMID:20181579 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
gonadotrophin-releasing hormone neuronal migration to the hypothalamus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndnf neuron-derived neurotrophic factor involved_in ISO (MGI:6442643|PMID:31883645) RGD PMID:31883645 MGI:6442643 NCBI chr 4:94,944,392...94,981,871
Ensembl chr 4:94,944,360...94,981,873 		JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (MGI:4850173|PMID:21059704) RGD PMID:21059704 MGI:4850173 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633 		JBrowse link
G Nrp2 neuropilin 2 involved_in ISO
IEA		 (MGI:4850173|PMID:21059704)
GO_REF:0000107		 RGD
Ensembl		 PMID:21059704 GO_REF:0000107 MGI:4850173 NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958 		JBrowse link
G Plxna1 plexin A1 involved_in ISO UniProtKB:P70208 (MGI:6389759|PMID:31690636) RGD PMID:31690636 MGI:6389759 NCBI chr 4:121,737,934...121,782,901
Ensembl chr 4:121,737,945...122,024,196 		JBrowse link
G Plxna3 plexin A3 involved_in ISO UniProtKB:P70206 (MGI:6389759|PMID:31690636) RGD PMID:31690636 MGI:6389759 NCBI chr  X:152,115,699...152,131,608
Ensembl chr  X:152,115,819...152,131,603 		JBrowse link
G Sema3a semaphorin 3A involved_in ISO (MGI:4850173|PMID:21059704) RGD PMID:21059704 MGI:4850173 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432 		JBrowse link
G Sema3e semaphorin 3E involved_in ISO (PMID:25985275) RGD PMID:25985275 NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229 		JBrowse link
habenula development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:19906978)		 Ensembl
RGD		 PMID:19906978 GO_REF:0000107 NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856155 (PMID:24528677)		 Ensembl
RGD		 PMID:24528677 GO_REF:0000107 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2387665|MGI:3512089 (PMID:19906978)		 Ensembl
RGD		 PMID:19906978 GO_REF:0000107 NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728 		JBrowse link
hindbrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:15,762,485...15,891,213
Ensembl chr 1:15,762,462...15,891,041 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:2180721 (PMID:15872003) RGD PMID:15872003 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO UniProtKB:P23359 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO UniProtKB:P49003 (MGI:1332253|PMID:10079236) RGD PMID:10079236 MGI:1332253 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
IEA		 (MGI:1931800|PMID:11262227)
GO_REF:0000107		 RGD
Ensembl		 PMID:11262227 GO_REF:0000107 MGI:1931800 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO MGI:95390 (PMID:15607945) RGD PMID:15607945 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G En2 engrailed homeobox 2 acts_upstream_of_or_within ISO MGI:95389 (PMID:15607945) RGD PMID:15607945 NCBI chr 4:7,221,096...7,226,943
Ensembl chr 4:7,221,096...7,226,943 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:15829521), (PMID:16651541) RGD PMID:15829521 PMID:16651541 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:1857164|MGI:1857509|MGI:98297 (PMID:15496441), (PMID:8575294) RGD PMID:8575294 PMID:15496441 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176174|MGI:2670936 (PMID:15872003)		 Ensembl
RGD		 PMID:15872003 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:3056069 (PMID:15367676) RGD PMID:15367676 NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
G Neurod1 neuronal differentiation 1 acts_upstream_of_or_within ISO MGI:2148229 (PMID:16368089) RGD PMID:16368089 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649 		JBrowse link
G Neurog3 neurogenin 3 IEP RGD PMID:9130143 RGD:633362 NCBI chr20:30,079,780...30,081,262
Ensembl chr20:30,079,780...30,081,262 		JBrowse link
G Nfib nuclear factor I/B acts_upstream_of_or_within ISO MGI:3530139 (PMID:15632069) RGD PMID:15632069 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479 		JBrowse link
G Pax6 paired box 6 IDA
IMP		 RGD PMID:11880342 PMID:20082710 RGD:729590, RGD:8552345 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Ptf1a pancreas associated transcription factor 1a involved_in ISS
ISO		 GO_REF:0000024
(MGI:1859633|PMID:11318877)		 HGNC
RGD		 PMID:11318877 GO_REF:0000024 MGI:1859633 NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135 		JBrowse link
G Ptn pleiotrophin IEP RGD PMID:9749725 RGD:9831452 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1934268|MGI:2387802|MGI:95728 (PMID:15183722), (PMID:15496441)		 UniProt
RGD		 PMID:15183722 PMID:15496441 GO_REF:0000024 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smad1 SMAD family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2157982 (PMID:15899870)		 Ensembl
RGD		 PMID:15899870 GO_REF:0000107 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651 		JBrowse link
G Smad9 SMAD family member 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3581766 (PMID:15899870)		 Ensembl
RGD		 PMID:15899870 GO_REF:0000107 NCBI chr 2:138,956,326...139,006,315
Ensembl chr 2:138,986,471...139,006,307 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2176173|MGI:3605892 (PMID:16330018) RGD PMID:16330018 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Tbr1 T-box brain transcription factor 1 acts_upstream_of_or_within ISO MGI:2179766 (PMID:16540585) RGD PMID:16540585 NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 IEP RGD PMID:11231055 RGD:2302116 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Wls Wnt ligand secretion mediator involved_in ISO (MGI:4834980|PMID:20614471) RGD PMID:20614471 MGI:4834980 NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298 		JBrowse link
hindbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlc1 DLC1 Rho GTPase activating protein acts_upstream_of_or_within ISO MGI:3529997 (PMID:15710412) RGD PMID:15710412 NCBI chr16:55,246,716...55,671,441
Ensembl chr16:55,291,584...55,671,439 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (PMID:9398437) RGD PMID:9398437 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104877 (PMID:11500373)		 Ensembl
RGD		 PMID:11500373 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO MGI:104853 (PMID:11500373) RGD PMID:11500373 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261 		JBrowse link
hindbrain tangential cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephb1 Eph receptor B1 IMP RGD PMID:28276447 RGD:127285619 NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839 		JBrowse link
G Ephb2 Eph receptor B2 IMP RGD PMID:28276447 RGD:127285619 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
G Phox2b paired-like homeobox 2b acts_upstream_of_or_within ISO MGI:4418265 (PMID:21068058) RGD PMID:21068058 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978 		JBrowse link
hippocampus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C IEP RGD PMID:8940033 RGD:631880 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327 		JBrowse link
G Akap5 A-kinase anchoring protein 5 IEP RGD PMID:19535604 RGD:2313144 NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578 		JBrowse link
G Akr1c14 aldo-keto reductase family 1, member C14 IEP RGD PMID:21047951 RGD:4145527 NCBI chr17:66,156,286...66,173,277
Ensembl chr17:66,156,288...66,173,277 		JBrowse link
G Alk ALK receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:5700373 (PMID:17487225) RGD PMID:17487225 NCBI chr 6:22,879,653...23,599,636
Ensembl chr 6:22,880,625...23,598,034 		JBrowse link
G Anxa3 annexin A3 IEP RGD PMID:18493952 RGD:2302825 NCBI chr14:12,727,708...12,781,717
Ensembl chr14:12,719,795...12,781,617 		JBrowse link
G Atg16l1 autophagy related 16-like 1 acts_upstream_of_or_within ISO MGI:4432181 (PMID:29078390) RGD PMID:29078390 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529 		JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 IEP RGD PMID:16200642 RGD:6906893 NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (PMID:18032602) RGD PMID:18032602 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:18032602) RGD PMID:18032602 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:18032602), (PMID:24695551) RGD PMID:18032602 PMID:24695551 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Bcan brevican involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2388924 (PMID:12370289)		 Ensembl
RGD		 PMID:12370289 GO_REF:0000107 NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460 		JBrowse link
G Casp3 caspase 3 IEP RGD PMID:18459132 RGD:2293317 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861809 (PMID:11517264)		 Ensembl
RGD		 PMID:11517264 GO_REF:0000107 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828 (PMID:11517264) RGD PMID:11517264 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456 		JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (PMID:11517264) RGD PMID:11517264 NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344 		JBrowse link
G Cfl1 cofilin 1 IEP RGD PMID:27073215 RGD:11568695 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587 		JBrowse link
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit part_of IEP RGD PMID:17046198 RGD:152995358 NCBI chr15:40,342,317...40,358,601
Ensembl chr15:40,342,317...40,358,601 		JBrowse link
G Chrna5 cholinergic receptor nicotinic alpha 5 subunit IEP RGD PMID:15558717 RGD:150530459 NCBI chr 8:55,369,794...55,398,526
Ensembl chr 8:55,369,794...55,398,146 		JBrowse link
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (PMID:19074029) RGD PMID:19074029 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406 		JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (PMID:19074029) RGD PMID:19074029 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238 		JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338 		JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 1:245,535,462...245,543,148
Ensembl chr 1:245,535,462...245,541,573 		JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 8:54,552,978...54,580,375
Ensembl chr 8:54,553,165...54,580,758 		JBrowse link
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3777252 (PMID:18477607)		 Ensembl
RGD		 PMID:18477607 GO_REF:0000107 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552 		JBrowse link
G Dclk2 doublecortin-like kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1277171 (PMID:19342486)		 Ensembl
RGD		 PMID:19342486 GO_REF:0000107 NCBI chr 2:172,202,733...172,338,411
Ensembl chr 2:172,208,706...172,338,250 		JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1918012|MGI:2387757 (PMID:19342486)		 Ensembl
RGD		 PMID:19342486 GO_REF:0000107 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476 		JBrowse link
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:94902 (PMID:11163262)		 Ensembl
RGD		 PMID:11163262 GO_REF:0000107 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780 		JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:94901 (PMID:11163262)		 Ensembl
RGD		 PMID:11163262 GO_REF:0000107 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597 		JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO MGI:2181426|MGI:3707260 (PMID:17360497) RGD PMID:17360497 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta IEP RGD PMID:12850562 RGD:11041879 NCBI chr 6:104,866,926...104,873,351
Ensembl chr 6:104,866,753...104,873,353 		JBrowse link
G Eif2b3 eukaryotic translation initiation factor 2B subunit gamma IEP RGD PMID:12850562 RGD:11041879 NCBI chr 5:130,492,167...130,558,692
Ensembl chr 5:130,492,220...130,563,332 		JBrowse link
G Eif2b4 eukaryotic translation initiation factor 2B subunit delta IEP RGD PMID:12850562 RGD:11041879 NCBI chr 6:25,183,177...25,188,832
Ensembl chr 6:25,183,186...25,188,829 		JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon IEP RGD PMID:12850562 RGD:11041879 NCBI chr11:80,394,433...80,404,468
Ensembl chr11:80,394,433...80,404,419 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Epha5 EPH receptor A5 involved_in ISO
ISS		 (MGI:2384261|PMID:12124402)
GO_REF:0000024		 RGD
UniProt		 PMID:12124402 GO_REF:0000024 MGI:2384261 NCBI chr14:23,653,393...24,020,129
Ensembl chr14:23,653,393...24,017,317 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit IEP RGD PMID:23932971 RGD:9587811 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit IEP RGD PMID:23932971 RGD:9587811 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362 		JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 IEP RGD PMID:14992819 RGD:13208825 NCBI chr 8:36,544,462...36,589,684
Ensembl chr 8:36,544,535...36,589,683 		JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5431268|PMID:22726441)		 UniProt
RGD		 PMID:22726441 GO_REF:0000024 MGI:5431268 NCBI chr  X:137,276,498...137,800,056
Ensembl chr  X:137,276,511...137,800,391 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:2684610|MGI:3798847 (PMID:22235033) RGD PMID:22235033 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:19535712 RGD:2325978 NCBI chr10:5,629,683...6,053,262
Ensembl chr10:5,631,369...6,044,637 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:19535712 RGD:2325978 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO
IEA		 (PMID:19581563)
GO_REF:0000107		 RGD
Ensembl		 PMID:19581563 GO_REF:0000107 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Hdac1 histone deacetylase 1 acts_upstream_of_or_within ISO MGI:1097691 (PMID:19380719) RGD PMID:19380719 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111 		JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of_or_within ISO MGI:108086 (PMID:19380719) RGD PMID:19380719 NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:22102872 RGD:10002783 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997 		JBrowse link
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 IEP RGD PMID:21047951 RGD:4145527 NCBI chr17:1,027,229...1,058,554
Ensembl chr17:1,027,229...1,058,554 		JBrowse link
G Hsd17b7 hydroxysteroid (17-beta) dehydrogenase 7 IEP RGD PMID:21047951 RGD:4145527 NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017 		JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:21047951 GO_REF:0000033, RGD:4145527 NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999 		JBrowse link
G Hsd3b2 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:21047951 GO_REF:0000033, RGD:4145527 NCBI chr 2:186,095,897...186,105,354
Ensembl chr 2:186,095,897...186,101,852 		JBrowse link
G Hsd3b3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:186,138,044...186,144,024
Ensembl chr 2:186,138,044...186,144,033 		JBrowse link
G Hsd3b5 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:186,008,944...186,028,417
Ensembl chr 2:186,008,943...186,020,393 		JBrowse link
G Htr5a 5-hydroxytryptamine receptor 5A IEP RGD PMID:16572590 RGD:2316993 NCBI chr 4:7,444,968...7,454,651
Ensembl chr 4:7,444,968...7,454,651 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO MGI:3505549 (PMID:15469968) RGD PMID:15469968 NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470 		JBrowse link
G Igf1r insulin-like growth factor 1 receptor IEP RGD PMID:22042446 RGD:10403040 NCBI chr 1:121,549,831...121,838,548
Ensembl chr 1:121,550,743...121,831,777 		JBrowse link
G Insr insulin receptor IEP RGD PMID:22042446 RGD:10403040 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in ISO (MGI:5613474|PMID:17315199) RGD PMID:17315199 MGI:5613474 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682 		JBrowse link
G Kcnq2 potassium voltage-gated channel subfamily Q member 2 acts_upstream_of_or_within ISO (PMID:15608631) RGD PMID:15608631 NCBI chr 3:168,194,776...168,253,831
Ensembl chr 3:168,195,357...168,275,071 		JBrowse link
G Kdm6b lysine demethylase 6B IDA RGD PMID:23932971 RGD:9587811 NCBI chr10:54,120,716...54,142,212
Ensembl chr10:54,121,848...54,130,794 		JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235) RGD PMID:23308235 MGI:5485315 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164 		JBrowse link
G Kif5a kinesin family member 5A IEP RGD PMID:9349526 RGD:12792964 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858 		JBrowse link
G Kif5b kinesin family member 5B IEP RGD PMID:9349526 RGD:12792964 NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508 		JBrowse link
G Kirrel3 kirre like nephrin family adhesion molecule 3 involved_in ISO (MGI:5705162|PMID:26575286) RGD PMID:26575286 MGI:5705162 NCBI chr 8:32,865,779...33,407,555
Ensembl chr 8:32,862,776...33,405,676 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO MGI:1933764 (PMID:10631168) RGD PMID:10631168 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lhx5 LIM homeobox 5 acts_upstream_of_or_within ISO MGI:2152620 (PMID:10325223) RGD PMID:10325223 NCBI chr12:36,126,186...36,134,625
Ensembl chr12:36,126,186...36,134,625 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (PMID:1638738) RGD PMID:1638738 NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253 		JBrowse link
G Lrp8 LDL receptor related protein 8 acts_upstream_of_or_within ISO MGI:109520 (PMID:17330141) RGD PMID:17330141 NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352 		JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor IEP RGD PMID:1521325 RGD:2316795 NCBI chr 1:47,879,956...47,911,500
Ensembl chr 1:47,880,309...47,911,709 		JBrowse link
G Mdk midkine involved_in ISO (MGI:2178952|PMID:10096022) RGD PMID:10096022 MGI:2178952 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:14751287 RGD:12743658 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid involved_in ISO (MGI:5571501|PMID:24828044) RGD PMID:24828044 MGI:5571501 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690 		JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (PMID:18032602) RGD PMID:18032602 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:22085911 RGD:5688137 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664 		JBrowse link
G Nefh neurofilament heavy chain IEP RGD PMID:14620872 RGD:9743946 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351 		JBrowse link
G Nefl neurofilament light chain IEP RGD PMID:14620872 RGD:9743946 NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793 		JBrowse link
G Nefm neurofilament medium chain IEP RGD PMID:14620872 RGD:9743946 NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755 		JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23863479)		 Ensembl
RGD		 PMID:23863479 GO_REF:0000107 NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667 		JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3802571 (PMID:18477394), (PMID:23042739), (PMID:23776487), (PMID:23964093) RGD PMID:18477394 PMID:23042739 PMID:23776487 PMID:23964093 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857494 (PMID:11163262)		 Ensembl
RGD		 PMID:11163262 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IEP RGD PMID:18493952 RGD:2302825 NCBI chr10:78,907,036...78,929,659
Ensembl chr10:78,906,083...78,916,408 		JBrowse link
G Nog noggin IEP RGD PMID:15171992 RGD:10416525 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (PMID:15456880) RGD PMID:15456880 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733 		JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO
IEA		 (MGI:3662936|PMID:16901643)
GO_REF:0000107		 RGD
Ensembl		 PMID:16901643 GO_REF:0000107 MGI:3662936 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1340044|MGI:2384054 (PMID:10729324), (PMID:17330141) RGD PMID:10729324 PMID:17330141 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 IEP RGD PMID:18493952 RGD:2302825 NCBI chr12:39,302,864...39,307,064
Ensembl chr12:39,302,840...39,307,862 		JBrowse link
G Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 IEP RGD PMID:20819118 RGD:8693633 NCBI chr13:22,308,532...22,530,978
Ensembl chr13:22,308,548...22,530,977 		JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 IEP RGD PMID:20819118 RGD:8693633 NCBI chr19:37,835,125...37,901,804
Ensembl chr19:37,835,125...37,905,513 		JBrowse link
G Plxna3 plexin A3 acts_upstream_of_or_within ISO MGI:2386961 (PMID:11683995) RGD PMID:11683995 NCBI chr  X:152,115,699...152,131,608
Ensembl chr  X:152,115,819...152,131,603 		JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B IEP RGD PMID:21123436 RGD:10043818 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083 		JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2158734 (PMID:15842738)		 Ensembl
RGD		 PMID:15842738 GO_REF:0000107 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947 		JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 IEP RGD PMID:10906718 RGD:9589828 NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218 		JBrowse link
G Ran RAN, member RAS oncogene family IEP RGD PMID:18493952 RGD:2302825 NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276 		JBrowse link
G Rara retinoic acid receptor, alpha IEP RGD PMID:18619947 RGD:8693612 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142 		JBrowse link
G Reln reelin involved_in IEA
ISO		 GO_REF:0000107
(MGI:3765383|PMID:17229826)		 Ensembl
RGD		 PMID:17229826 GO_REF:0000107 MGI:3765383 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Sct secretin involved_in ISS
ISO		 GO_REF:0000024
(MGI:3814626|PMID:18534766)		 UniProt
RGD		 PMID:18534766 GO_REF:0000024 MGI:3814626 NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658 		JBrowse link
G Sema6b semaphorin 6B involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:4454564|PMID:20484647)		 UniProt
Ensembl
RGD		 PMID:20484647 GO_REF:0000024 GO_REF:0000107 MGI:4454564 NCBI chr 9:950,939...967,905
Ensembl chr 9:950,939...961,521 		JBrowse link
G Slc17a6 solute carrier family 17 member 6 IEP RGD PMID:18502731 RGD:9999204 NCBI chr 1:101,212,489...101,252,543
Ensembl chr 1:101,212,489...101,252,542 		JBrowse link
G Slc32a1 solute carrier family 32 member 1 IEP RGD PMID:18502731 RGD:9999204 NCBI chr 3:147,267,373...147,271,842
Ensembl chr 3:147,267,373...147,271,844 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461 		JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 IEP RGD PMID:21047951 RGD:4145527 NCBI chr 6:21,426,225...21,465,727
Ensembl chr 6:21,426,215...21,462,112 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2181426|MGI:2385464 (PMID:15837932) RGD PMID:15837932 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Tent2 terminal nucleotidyltransferase 2 IEP RGD PMID:24074826 RGD:9684936 NCBI chr 2:24,380,135...24,432,099
Ensembl chr 2:24,380,225...24,432,099 		JBrowse link
G Tp73 tumor protein p73 acts_upstream_of_or_within ISO MGI:1859911 (PMID:10716451) RGD PMID:10716451 NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128 		JBrowse link
G Tsc1 TSC complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176055|MGI:2656240 (PMID:17522300)		 Ensembl
RGD		 PMID:17522300 GO_REF:0000107 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:6478862|PMID:31983064)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:31983064 GO_REF:0000024 GO_REF:0000107 MGI:6478862 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588 		JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO MGI:3617352 (PMID:17218254) RGD PMID:17218254 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186 		JBrowse link
G Uba6 ubiquitin-like modifier activating enzyme 6 acts_upstream_of_or_within ISO MGI:2176173|MGI:5509054 (PMID:23499007) RGD PMID:23499007 NCBI chr14:21,884,039...21,947,857
Ensembl chr14:21,884,039...21,947,857 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in ISO (MGI:3662936|PMID:16901643) RGD PMID:16901643 MGI:3662936 NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked acts_upstream_of_or_within ISO MGI:5438072 (PMID:23861879) RGD PMID:23861879 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (PMID:10631167) RGD PMID:10631167 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Xrcc1 X-ray repair cross complementing 1 acts_upstream_of_or_within ISO MGI:3836442 (PMID:19633665) RGD PMID:19633665 NCBI chr 1:80,140,495...80,168,705
Ensembl chr 1:80,141,207...80,168,701 		JBrowse link
G Xrn2 5'-3' exoribonuclease 2 IEP RGD PMID:23933240 RGD:9684963 NCBI chr 3:134,436,916...134,509,308
Ensembl chr 3:134,437,109...134,509,306 		JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2667341 (PMID:12796778)		 Ensembl
RGD		 PMID:12796778 GO_REF:0000107 NCBI chr10:60,584,665...60,622,352
Ensembl chr10:60,584,652...60,671,589 		JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (PMID:19409883) RGD PMID:19409883 NCBI chr13:89,439,501...89,447,958
Ensembl chr13:89,439,420...89,448,862 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2684610 (PMID:17644613) RGD PMID:17644613 NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157 		JBrowse link
G Zic1 Zic family member 1 involved_in ISO MGI:106676 (PMID:17507568) RGD PMID:17507568 NCBI chr 8:91,908,548...91,918,020
Ensembl chr 8:91,908,576...91,912,731 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:106683 (PMID:17507568) RGD PMID:17507568 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
hypoglossal nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:3720850 (PMID:21533046)		 Ensembl
RGD		 PMID:21533046 GO_REF:0000107 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236 		JBrowse link
hypophysis morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prop1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO MGI:3690463 (PMID:16678101) RGD PMID:16678101 NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857617 (PMID:15037319)		 Ensembl
RGD		 PMID:15037319 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
hypothalamus cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hap1 huntingtin-associated protein 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5560429|PMID:24355921)		 Ensembl
RGD		 PMID:24355921 GO_REF:0000107 MGI:5560429 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126 		JBrowse link
G Otp orthopedia homeobox acts_upstream_of_or_within ISO MGI:2180541 (PMID:10557207) RGD PMID:10557207 NCBI chr 2:26,108,158...26,116,359
Ensembl chr 2:26,108,163...26,116,359 		JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857996 (PMID:8543156)		 Ensembl
RGD		 PMID:8543156 GO_REF:0000107 NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838 		JBrowse link
G Prdm13 PR/SET domain 13 involved_in ISO (MGI:6836711|PMID:34730112) RGD PMID:34730112 MGI:6836711 NCBI chr 5:35,220,815...35,232,866
Ensembl chr 5:35,225,435...35,232,881 		JBrowse link
G Prop1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO MGI:1856842 (PMID:9067988) RGD PMID:9067988 NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434 		JBrowse link
hypothalamus cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in ISO (MGI:4887555|PMID:19046377) RGD PMID:19046377 MGI:4887555 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781 		JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857846 (PMID:18206388) RGD PMID:18206388 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
hypothalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857429 (PMID:15342910) RGD PMID:15342910 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO MGI:1856982 (PMID:30498428) RGD PMID:30498428 NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308 		JBrowse link
G Crh corticotropin releasing hormone IEP RGD PMID:20002962 RGD:5130950 NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919 		JBrowse link
G Crhr1 corticotropin releasing hormone receptor 1 IEP RGD PMID:20002962 RGD:5130950 NCBI chr10:89,040,186...89,083,481
Ensembl chr10:89,040,203...89,083,481 		JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IEP RGD PMID:20002962 RGD:5130950 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:1858008 (PMID:32868762)		 Ensembl
RGD		 PMID:32868762 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP RGD PMID:15804399 RGD:4891928 NCBI chr 8:54,552,978...54,580,375
Ensembl chr 8:54,553,165...54,580,758 		JBrowse link
G Esr2 estrogen receptor 2 IEP RGD PMID:12960049 RGD:1582276 NCBI chr 6:94,858,438...94,909,630
Ensembl chr 6:94,809,547...94,908,919 		JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor IEP RGD PMID:8946059 RGD:2313681 NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010 		JBrowse link
G Gsx1 GS homeobox 1 acts_upstream_of_or_within ISO MGI:2154448 (PMID:8631293) RGD PMID:8631293 NCBI chr12:7,880,663...7,882,947
Ensembl chr12:7,881,460...7,882,753 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:23291449 RGD:7207858 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Ncoa1 nuclear receptor coactivator 1 IEP RGD PMID:12551846 RGD:5688241 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:5302534 (PMID:32868762)		 Ensembl
RGD		 PMID:32868762 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Nkx2-6 NK2 homeobox 6 involved_in ISO (MGI:1267297|PMID:9621431) RGD PMID:9621431 MGI:1267297 NCBI chr15:44,443,151...44,447,248
Ensembl chr15:44,443,101...44,447,247 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO
IEA		 (PMID:20512159)
GO_REF:0000107		 RGD
Ensembl		 PMID:20512159 GO_REF:0000107 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169 		JBrowse link
G Rax retina and anterior neural fold homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856862 (PMID:925203)		 Ensembl
RGD		 PMID:925203 GO_REF:0000107 NCBI chr18:59,463,347...59,467,469
Ensembl chr18:59,463,737...59,467,431 		JBrowse link
G Reln reelin IEP RGD PMID:10436054 RGD:634730 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Sox3 SRY-box transcription factor 3 involved_in ISO (MGI:3033563|PMID:14981518) RGD PMID:14981518 MGI:3033563 NCBI chr  X:139,308,608...139,310,687
Ensembl chr  X:139,309,329...139,310,678 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:15804399 PMID:8770891 RGD:4891928, RGD:4892048 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461 		JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 IEP RGD PMID:15804399 RGD:4891928 NCBI chr 6:21,426,225...21,465,727
Ensembl chr 6:21,426,215...21,462,112 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in ISO (MGI:3662936|PMID:16901643) RGD PMID:16901643 MGI:3662936 NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169 		JBrowse link
hypothalamus gonadotrophin-releasing hormone neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nhlh2 nescient helix loop helix 2 acts_upstream_of_or_within_positive_effect ISO (MGI:5504302|PMID:23785158) RGD PMID:23785158 MGI:5504302 NCBI chr 2:189,444,287...189,449,625
Ensembl chr 2:189,442,711...189,449,625 		JBrowse link
G Ubb ubiquitin B acts_upstream_of_or_within ISO MGI:3774112 (PMID:18299572) RGD PMID:18299572 NCBI chr10:47,247,630...47,249,335
Ensembl chr10:47,245,637...47,249,333 		JBrowse link
inferior colliculus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in ISO (MGI:1931655|PMID:11170346) RGD PMID:11170346 MGI:1931655 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781 		JBrowse link
G Tfap2d transcription factor AP-2 delta acts_upstream_of_or_within ISO MGI:5296818 (PMID:21858141) RGD PMID:21858141 NCBI chr 9:21,680,577...21,744,840
Ensembl chr 9:21,680,577...21,740,728 		JBrowse link
interkinetic nuclear migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep120 centrosomal protein 120 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:17920017)		 GO_Central
RGD		 PMID:17920017 GO_REF:0000033 NCBI chr18:47,127,979...47,189,964
Ensembl chr18:47,127,981...47,189,964 		JBrowse link
G Dock7 dedicator of cytokinesis 7 involved_in ISO (MGI:5447899|PMID:22842144) RGD PMID:22842144 MGI:5447899 NCBI chr 5:113,599,371...113,782,871
Ensembl chr 5:113,600,198...113,782,813 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:2177762 (PMID:16364283) RGD PMID:16364283 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Hook3 hook microtubule-tethering protein 3 acts_upstream_of_or_within ISO (PMID:20152126) RGD PMID:20152126 NCBI chr16:65,954,293...66,058,812
Ensembl chr16:65,954,350...66,061,338 		JBrowse link
G Kif1a kinesin family member 1A IMP RGD PMID:21037580 RGD:13204706 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
G Pax6 paired box 6 IMP RGD PMID:17825043 RGD:8552353 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Pcm1 pericentriolar material 1 acts_upstream_of_or_within ISO (PMID:20152126) RGD PMID:20152126 NCBI chr16:51,008,315...51,105,261
Ensembl chr16:51,008,315...51,105,091 		JBrowse link
G Tacc1 transforming, acidic coiled-coil containing protein 1 acts_upstream_of_or_within ISO (PMID:17920017) RGD PMID:17920017 NCBI chr16:66,812,232...66,895,736
Ensembl chr16:66,812,295...66,895,733 		JBrowse link
G Tacc2 transforming, acidic coiled-coil containing protein 2 acts_upstream_of_or_within ISO (PMID:17920017) RGD PMID:17920017 NCBI chr 1:185,139,223...185,327,881
Ensembl chr 1:185,116,111...185,327,881 		JBrowse link
G Tacc3 transforming, acidic coiled-coil containing protein 3 acts_upstream_of_or_within ISO (PMID:17920017) RGD PMID:17920017 NCBI chr14:77,051,209...77,065,343
Ensembl chr14:77,051,215...77,065,219 		JBrowse link
interneuron migration from the subpallium to the cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl13b ADP-ribosylation factor like GTPase 13B involved_in ISO (MGI:5460933|PMID:23153492) RGD PMID:23153492 MGI:5460933 NCBI chr11:150,100...217,103
Ensembl chr11:150,955...217,197 		JBrowse link
lateral ganglionic eminence cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856282 (PMID:20943929) RGD PMID:20943929 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
lateral geniculate nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:2158714 (PMID:12097474) RGD PMID:12097474 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619 		JBrowse link
lateral ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 involved_in ISO
IEP		 (PMID:16133142)
(MGI:3608308|PMID:16133142)		 RGD PMID:16133142 PMID:16133142 MGI:3608308, RGD:8553876 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690 		JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:69165|PMID:7525597)		 Ensembl
RGD		 PMID:7525597 GO_REF:0000107 MGI:69165 NCBI chr10:54,318,698...54,324,933
Ensembl chr10:54,318,701...54,324,933 		JBrowse link
G Dbi diazepam binding inhibitor acts_upstream_of_or_within ISO (PMID:17150371) RGD PMID:17150371 NCBI chr13:31,241,466...31,249,853
Ensembl chr13:31,206,988...31,268,693 		JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2180081 (PMID:11912187)		 Ensembl
RGD		 PMID:11912187 GO_REF:0000107 NCBI chr 2:78,937,788...79,255,551
Ensembl chr 2:78,937,800...79,254,890 		JBrowse link
G Dpcd deleted in primary ciliary dyskinesia involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20080492)		 Ensembl
RGD		 PMID:20080492 GO_REF:0000107 NCBI chr 1:244,408,766...244,426,891
Ensembl chr 1:244,408,785...244,426,888 		JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386439|MGI:2386445 (PMID:10712438), (PMID:11283949), (PMID:9356462) RGD PMID:9356462 PMID:10712438 PMID:11283949 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165 		JBrowse link
G Nfix nuclear factor I X involved_in
acts_upstream_of_or_within		 ISO MGI:3714028 (PMID:25960350)
MGI:3802571 (PMID:29452604)		 RGD PMID:25960350 PMID:29452604 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in ISO
IEA		 (MGI:3763347|PMID:17174898)
GO_REF:0000107		 RGD
Ensembl		 PMID:17174898 GO_REF:0000107 MGI:3763347 NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354 		JBrowse link
G Numbl NUMB-like, endocytic adaptor protein involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:3763347|PMID:17174898)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17174898 GO_REF:0000024 GO_REF:0000107 MGI:3763347 NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776 		JBrowse link
G Pax5 paired box 5 acts_upstream_of_or_within ISO MGI:2386577 (PMID:23349049) RGD PMID:23349049 NCBI chr 5:58,763,334...58,945,719
Ensembl chr 5:58,765,036...58,944,326 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4867728 (PMID:21055390)		 Ensembl
RGD		 PMID:21055390 GO_REF:0000107 NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (MGI:4849324|PMID:21048919) RGD PMID:21048919 MGI:4849324 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
layer formation in cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:3796260|PMID:18509043)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:18509043 GO_REF:0000024 GO_REF:0000107 MGI:3796260 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861809 (PMID:11517264)		 Ensembl
RGD		 PMID:11517264 GO_REF:0000107 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828 (PMID:11517264) RGD PMID:11517264 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456 		JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (PMID:11517264) RGD PMID:11517264 NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344 		JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO (PMID:22235340) RGD PMID:22235340 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2148567|MGI:3701617 (PMID:20503375)		 Ensembl
RGD		 PMID:20503375 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5463669|PMID:23056358)		 UniProt
Ensembl
RGD		 PMID:23056358 GO_REF:0000024 GO_REF:0000107 MGI:5463669 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280 		JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2387757 (PMID:19342486)		 Ensembl
RGD		 PMID:19342486 GO_REF:0000107 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:2176173|MGI:3798847 (PMID:21525285) RGD PMID:21525285 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Lrp8 LDL receptor related protein 8 acts_upstream_of_or_within ISO MGI:109520 (PMID:17330141) RGD PMID:17330141 NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352 		JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within ISO MGI:5509338 (PMID:23097495) RGD PMID:23097495 NCBI chr 1:65,525,206...65,539,538
Ensembl chr 1:65,525,213...65,539,538 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350 (PMID:15385616) RGD PMID:15385616 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1340044 (PMID:17330141) RGD PMID:17330141 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Reln reelin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856398 (PMID:20847152)		 Ensembl
RGD		 PMID:20847152 GO_REF:0000107 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO MGI:5545789 (PMID:24210661) RGD PMID:24210661 NCBI chr10:82,352,159...82,388,829
Ensembl chr10:82,351,680...82,388,830 		JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO (PMID:34235142) RGD PMID:34235142 NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924 		JBrowse link
limbic system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179895)
(MGI:4410430|PMID:18179895)		 RGD PMID:18179895 MGI:4410430 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:3710254 (PMID:17473172) RGD PMID:17473172 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
locus ceruleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2a paired-like homeobox 2a involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2180328|MGI:4438118 (PMID:21068058), (PMID:9115735)		 Ensembl
RGD		 PMID:9115735 PMID:21068058 GO_REF:0000107 NCBI chr 1:156,178,754...156,183,118
Ensembl chr 1:156,178,754...156,183,118 		JBrowse link
mammillary axonal complex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO MGI:2387499|MGI:2668659 (PMID:25741725) RGD PMID:25741725 NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157 		JBrowse link
mammillary body development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in ISO (MGI:1931655|PMID:11170346), (MGI:3589689|PMID:15654859) RGD PMID:11170346 PMID:15654859 MGI:1931655 MGI:3589689 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781 		JBrowse link
mammillothalamic axonal tract development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxb1 forkhead box B1 involved_in ISO (MGI:1352733|PMID:10662642), (MGI:1931655|PMID:11170346) RGD PMID:10662642 PMID:11170346 MGI:1352733 MGI:1931655 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781 		JBrowse link
medullary reticular formation development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired-like homeobox 2b involved_in ISO (MGI:1098916|PMID:9374403) RGD PMID:9374403 MGI:1098916 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978 		JBrowse link
metencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO MGI:3711317 (PMID:17325035) RGD PMID:17325035 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Otx1 orthodenticle homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97451 (PMID:20816794)		 Ensembl
RGD		 PMID:20816794 GO_REF:0000107 NCBI chr14:96,082,146...96,089,161
Ensembl chr14:96,082,151...96,089,086 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:97450 (PMID:20816794) RGD PMID:20816794 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1857490 (PMID:2205396) RGD PMID:2205396 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
midbrain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C IEP RGD PMID:8940033 RGD:631880 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327 		JBrowse link
G Aplp2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO MGI:88059 (PMID:15689559) RGD PMID:15689559 NCBI chr 8:29,599,230...29,662,311
Ensembl chr 8:29,599,230...29,661,855 		JBrowse link
G Barhl1 BarH-like homeobox 1 acts_upstream_of_or_within ISO MGI:2181383 (PMID:16752387) RGD PMID:16752387 NCBI chr 3:12,241,327...12,248,649
Ensembl chr 3:12,241,327...12,248,649 		JBrowse link
G Cma1 chymase 1 IEP RGD PMID:21396433 RGD:5128663 NCBI chr15:29,417,451...29,420,233
Ensembl chr15:29,417,451...29,420,233 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (MGI:1931800|PMID:11262227) RGD PMID:11262227 MGI:1931800 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 IEP RGD PMID:18436867 RGD:4892032 NCBI chr14:17,310,790...17,312,250
Ensembl chr14:17,310,426...17,313,093 		JBrowse link
G Cxcr2 C-X-C motif chemokine receptor 2 IEP RGD PMID:18436867 RGD:4892032 NCBI chr 9:75,729,493...75,735,868
Ensembl chr 9:75,729,115...75,739,425 		JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within ISO MGI:3757646 (PMID:17765678) RGD PMID:17765678 NCBI chr15:75,786...209,735
Ensembl chr15:75,786...187,837 		JBrowse link
G En1 engrailed homeobox 1 involved_in
acts_upstream_of_or_within		 ISO UniProtKB:P04426 (MGI:82938|PMID:8848044)
MGI:95390 (PMID:15175251), (PMID:15607945)		 RGD PMID:8848044 PMID:15175251 PMID:15607945 MGI:82938 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G En2 engrailed homeobox 2 acts_upstream_of_or_within ISO MGI:95389 (PMID:15175251), (PMID:15607945) RGD PMID:15175251 PMID:15607945 NCBI chr 4:7,221,096...7,226,943
Ensembl chr 4:7,221,096...7,226,943 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:2448986|MGI:95523 (PMID:17687036) RGD PMID:17687036 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:95522 (PMID:17687036) RGD PMID:17687036 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Foxb1 forkhead box B1 involved_in ISO (MGI:1931655|PMID:11170346) RGD PMID:11170346 MGI:1931655 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781 		JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO MGI:108474 (PMID:19842188) RGD PMID:19842188 NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369 		JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO MGI:108476 (PMID:19842188) RGD PMID:19842188 NCBI chr 7:70,055,012...70,086,781
Ensembl chr 7:70,055,068...70,086,776 		JBrowse link
G Gdf7 growth differentiation factor 7 acts_upstream_of_or_within ISO MGI:2386906 (PMID:10693795) RGD PMID:10693795 NCBI chr 6:31,171,495...31,182,484
Ensembl chr 6:31,178,119...31,182,447 		JBrowse link
G Gdnf glial cell derived neurotrophic factor IEP RGD PMID:16650834 RGD:2324945 NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104877 (PMID:11500373)		 Ensembl
RGD		 PMID:11500373 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO MGI:104853 (PMID:11500373) RGD PMID:11500373 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261 		JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO MGI:3711317 (PMID:17325035) RGD PMID:17325035 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha acts_upstream_of_or_within ISO MGI:1888413 (PMID:21752929) RGD PMID:21752929 NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO MGI:2158463 (PMID:21752929) RGD PMID:21752929 NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:11029008) RGD PMID:11029008 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:1933766 (PMID:15188430) RGD PMID:15188430 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:98297 (PMID:16020517) RGD PMID:16020517 NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191 		JBrowse link
G Otx1 orthodenticle homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97451 (PMID:15201224), (PMID:20816794)		 Ensembl
RGD		 PMID:15201224 PMID:20816794 GO_REF:0000107 NCBI chr14:96,082,146...96,089,161
Ensembl chr14:96,082,151...96,089,086 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:1857510|MGI:2176222|MGI:2661065|MGI:3046841|MGI:97450 (PMID:15201223), (PMID:15201224), (PMID:15888661), (PMID:20816794) RGD PMID:15201223 PMID:15201224 PMID:15888661 PMID:20816794 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Phox2a paired-like homeobox 2a involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21752929)		 Ensembl
RGD		 PMID:21752929 GO_REF:0000107 NCBI chr 1:156,178,754...156,183,118
Ensembl chr 1:156,178,754...156,183,118 		JBrowse link
G Pitx3 paired-like homeodomain 3 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1856667 (PMID:14973278), (PMID:17919745)
(MGI:3582099|PMID:15950611)		 UniProt
RGD		 PMID:14973278 PMID:15950611 PMID:17919745 GO_REF:0000024 MGI:3582099 NCBI chr 1:245,001,106...245,013,881
Ensembl chr 1:245,001,164...245,013,892 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:104719 (PMID:16020517)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:16020517 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smad1 SMAD family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2157982 (PMID:15899870)		 Ensembl
RGD		 PMID:15899870 GO_REF:0000107 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651 		JBrowse link
G Smad9 SMAD family member 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3581766 (PMID:15899870)		 Ensembl
RGD		 PMID:15899870 GO_REF:0000107 NCBI chr 2:138,956,326...139,006,315
Ensembl chr 2:138,986,471...139,006,307 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO UniProtKB:Q1LYC2 (PMID:26637982) RGD PMID:26637982 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543 		JBrowse link
G Tal2 TAL bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:2684532 (PMID:11071772) RGD PMID:11071772 NCBI chr 5:68,411,012...68,417,569
Ensembl chr 5:68,411,012...68,417,569 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (MGI:4849324|PMID:21048919) RGD PMID:21048919 MGI:4849324 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in ISO (MGI:3662936|PMID:16901643) RGD PMID:16901643 MGI:3662936 NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169 		JBrowse link
G Wls Wnt ligand secretion mediator involved_in ISO (MGI:4834980|PMID:20614471) RGD PMID:20614471 MGI:4834980 NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298 		JBrowse link
G Wnt1 Wnt family member 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:1931348|PMID:2202907), (MGI:2679774|PMID:14557550), (MGI:82938|PMID:8848044)
MGI:1857490 (PMID:2205396)		 RGD PMID:2202907 PMID:2205396 PMID:8848044 PMID:14557550 MGI:1931348 MGI:2679774 MGI:82938 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2679774|PMID:14557550) RGD PMID:14557550 MGI:2679774 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO UniProtKB:P04426 (MGI:2679774|PMID:14557550), (MGI:5469218|PMID:23324743) RGD PMID:14557550 PMID:23324743 MGI:2679774 MGI:5469218 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csnk1d casein kinase 1, delta involved_in ISO UniProtKB:P22725 (MGI:3707948|PMID:17244647) RGD PMID:17244647 MGI:3707948 NCBI chr10:106,221,992...106,256,620
Ensembl chr10:106,221,992...106,256,614 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
IEA		 (MGI:3836885|PMID:19122665)
GO_REF:0000107		 RGD
Ensembl		 PMID:19122665 GO_REF:0000107 MGI:3836885 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha involved_in ISO (MGI:5705221|PMID:19951692) RGD PMID:19951692 MGI:5705221 NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (MGI:3829860|PMID:18953410), (MGI:5466648|PMID:23109420) RGD PMID:18953410 PMID:23109420 MGI:3829860 MGI:5466648 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Ryk receptor-like tyrosine kinase involved_in ISO (MGI:5707582|PMID:23517308) RGD PMID:23517308 MGI:5707582 NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698 		JBrowse link
G Wnt1 Wnt family member 1 involved_in ISO (MGI:5469218|PMID:23324743), (MGI:5705221|PMID:19951692) RGD PMID:19951692 PMID:23324743 MGI:5469218 MGI:5705221 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
G Wnt2 Wnt family member 2 involved_in ISO (PMID:20018874) RGD PMID:20018874 NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402 		JBrowse link
G Wnt3 Wnt family member 3 involved_in ISO (PMID:25640183) RGD PMID:25640183 NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:P04426 (MGI:2679774|PMID:14557550), (MGI:3829860|PMID:18953410), (MGI:5469218|PMID:23324743), (MGI:5700308|PMID:15748172), (MGI:5707582|PMID:23517308)		 Ensembl
RGD		 PMID:14557550 PMID:15748172 PMID:18953410 PMID:23324743 PMID:23517308 GO_REF:0000107 MGI:2679774 MGI:3829860 MGI:5469218 MGI:5700308 MGI:5707582 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Wnt9b Wnt family member 9B involved_in ISO (PMID:25640183) RGD PMID:25640183 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035 		JBrowse link
midbrain morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO MGI:2155441 (PMID:9030684) RGD PMID:9030684 NCBI chr 6:14,533,870...14,613,348
Ensembl chr 6:14,533,360...14,611,107 		JBrowse link
midbrain-hindbrain boundary development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO MGI:1857163 (PMID:15607945) RGD PMID:15607945 NCBI chr13:31,750,892...31,756,477
Ensembl chr13:31,751,545...31,755,943 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:2150347 (PMID:17601531) RGD PMID:17601531 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:16651541) RGD PMID:16651541 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:11029008), (PMID:19795512) RGD PMID:11029008 PMID:19795512 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1857490 (PMID:2205396) RGD PMID:2205396 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single stranded DNA binding protein 3 involved_in ISO
IEA		 (MGI:3578570|PMID:15857913)
GO_REF:0000107		 RGD
Ensembl		 PMID:15857913 GO_REF:0000107 MGI:3578570 NCBI chr 5:121,691,370...121,828,035
Ensembl chr 5:121,691,393...121,827,992 		JBrowse link
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:1856382 (PMID:8555108) RGD PMID:8555108 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:16651541) RGD PMID:16651541 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104877 (PMID:11500373)		 Ensembl
RGD		 PMID:11500373 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO MGI:104853 (PMID:11522634) RGD PMID:11522634 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261 		JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
negative regulation of cell motility involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmerb1 bMERB domain containing 1 acts_upstream_of_or_within ISO (PMID:25099998) RGD PMID:25099998 NCBI chr10:1,779,834...1,946,586
Ensembl chr10:1,779,835...1,946,575 		JBrowse link
negative regulation of cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt5a Wnt family member 5A involved_in ISO
IEA		 (MGI:3829860|PMID:18953410)
GO_REF:0000107		 RGD
Ensembl		 PMID:18953410 GO_REF:0000107 MGI:3829860 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
negative regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 acts_upstream_of_or_within ISO MGI:4831137 (PMID:20153830) RGD PMID:20153830 NCBI chr 1:196,525,153...196,528,152
Ensembl chr 1:196,523,920...196,528,302 		JBrowse link
G Slc6a4 solute carrier family 6 member 4 IMP RGD PMID:18573488 RGD:4889489 NCBI chr10:61,824,208...61,858,924
Ensembl chr10:61,826,123...61,858,384 		JBrowse link
negative regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin involved_in ISO
IEA		 (PMID:26147761)
GO_REF:0000107
(MGI:5708430|PMID:26147761)		 RGD
Ensembl		 PMID:26147761 GO_REF:0000107 MGI:5708430 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IDA PMID:11399758 UniProt PMID:11399758 RGD:8554692 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in IDA PMID:11399758 UniProt PMID:11399758 RGD:8554692 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:19555672 RGD:10043320 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434 		JBrowse link
neuroblast division in subventricular zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akna AT-hook transcription factor involved_in ISO
IBA		 (MGI:6294240|PMID:30787442)
GO_REF:0000033		 RGD
GO_Central		 PMID:30787442 GO_REF:0000033 MGI:6294240 NCBI chr 5:76,777,415...76,824,380
Ensembl chr 5:76,777,415...76,816,017 		JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in ISO
IEA		 (MGI:3763347|PMID:17174898)
GO_REF:0000107		 RGD
Ensembl		 PMID:17174898 GO_REF:0000107 MGI:3763347 NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354 		JBrowse link
G Numbl NUMB-like, endocytic adaptor protein involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:3763347|PMID:17174898)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17174898 GO_REF:0000024 GO_REF:0000107 MGI:3763347 NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776 		JBrowse link
neurohypophysis development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otp orthopedia homeobox acts_upstream_of_or_within ISO MGI:2180541 (PMID:10557207) RGD PMID:10557207 NCBI chr 2:26,108,158...26,116,359
Ensembl chr 2:26,108,163...26,116,359 		JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857996 (PMID:8543156)		 Ensembl
RGD		 PMID:8543156 GO_REF:0000107 NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838 		JBrowse link
neuronal-glial interaction involved in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin subunit beta 1 involved_in ISO (PMID:23472759) RGD PMID:23472759 NCBI chr 6:47,835,492...47,902,585
Ensembl chr 6:47,835,525...47,902,585 		JBrowse link
neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:6368077|PMID:2438288)		 Ensembl
RGD		 PMID:2438288 GO_REF:0000107 MGI:6368077 NCBI chr10:54,318,698...54,324,933
Ensembl chr10:54,318,701...54,324,933 		JBrowse link
nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sun1 Sad1 and UNC84 domain containing 1 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr12:15,396,378...15,441,277
Ensembl chr12:15,396,381...15,441,571 		JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr 7:111,275,374...111,292,565
Ensembl chr 7:111,275,380...111,292,553 		JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 involved_in ISO (MGI:4412315|PMID:19874786) RGD PMID:19874786 MGI:4412315 NCBI chr 6:94,537,088...94,848,085
Ensembl chr 6:94,537,088...94,848,064 		JBrowse link
nucleus accumbens development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3512079 (PMID:17207476)		 Ensembl
RGD		 PMID:17207476 GO_REF:0000107 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
olfactory bulb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in ISO (MGI:2159417|PMID:11884758) RGD PMID:11884758 MGI:2159417 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869 		JBrowse link
G Ak1 adenylate kinase 1 IEP RGD PMID:9920788 RGD:632499 NCBI chr 3:15,912,431...15,923,045
Ensembl chr 3:15,912,485...15,923,041 		JBrowse link
G Ak3 adenylate kinase 3 IEP RGD PMID:9920788 RGD:632499 NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625 		JBrowse link
G Arx aristaless related homeobox acts_upstream_of_or_within ISO MGI:2429693 (PMID:15677725) RGD PMID:15677725 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:3707678 (PMID:19279158) RGD PMID:19279158 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Crtac1 cartilage acidic protein 1 acts_upstream_of_or_within ISO (PMID:21817055) RGD PMID:21817055 NCBI chr 1:241,091,679...241,233,677
Ensembl chr 1:241,078,864...241,233,421 		JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IEA
ISO		 GO_REF:0000107
(MGI:5430247|PMID:22542597)		 Ensembl
RGD		 PMID:22542597 GO_REF:0000107 MGI:5430247 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415 		JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857828 (PMID:7590232)		 Ensembl
RGD		 PMID:7590232 GO_REF:0000107 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597 		JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 IEP RGD PMID:14751288 RGD:2316247 NCBI chr15:41,005,551...41,111,724
Ensembl chr15:41,005,551...41,111,829 		JBrowse link
G Efna2 ephrin A2 IEP RGD PMID:12234653 RGD:634733 NCBI chr 7:9,515,635...9,528,071
Ensembl chr 7:9,516,429...9,527,061 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO MGI:3774027 (PMID:19435790) RGD PMID:19435790 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO MGI:2176173|MGI:2682061 (PMID:14605369) RGD PMID:14605369 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within ISO MGI:3626294 (PMID:16971467) RGD PMID:16971467 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078 		JBrowse link
G Fut1 fucosyltransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3701717|PMID:16884711)		 UniProt
RGD		 PMID:16884711 GO_REF:0000024 MGI:3701717 NCBI chr 1:96,086,934...96,090,352
Ensembl chr 1:96,086,635...96,090,616 		JBrowse link
G Gsx2 GS homeobox 2 involved_in ISO MGI:4412067 (PMID:28814342) RGD PMID:28814342 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:3830733 (PMID:19109490) RGD PMID:19109490 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (MGI:5485315|PMID:23308235), (MGI:5605219|PMID:24931760) RGD PMID:23308235 PMID:24931760 MGI:5485315 MGI:5605219 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164 		JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4399044 (PMID:19820705)		 Ensembl
RGD		 PMID:19820705 GO_REF:0000107 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:21168496) RGD PMID:21168496 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:12605461 RGD:12790706 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3802571 (PMID:25331604) RGD PMID:25331604 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350|MGI:2176490 (PMID:11997145), (PMID:12527005) RGD PMID:11997145 PMID:12527005 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Pax6 paired box 6 IMP RGD PMID:14736749 RGD:8552333 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (PMID:20096683) RGD PMID:20096683 NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:2388379 (PMID:18024993) RGD PMID:18024993 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Sema3a semaphorin 3A involved_in ISO
ISS		 (PMID:22416012)
GO_REF:0000024		 RGD
UniProt		 PMID:22416012 GO_REF:0000024 NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432 		JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (PMID:11731796) RGD PMID:11731796 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Slit1 slit guidance ligand 1 acts_upstream_of_or_within ISO MGI:1315205 (PMID:12097499) RGD PMID:12097499 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127 		JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO MGI:1315203 (PMID:12097499) RGD PMID:12097499 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO MGI:5140723 (PMID:21646512) RGD PMID:21646512 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418 		JBrowse link
G Zic1 Zic family member 1 involved_in ISO MGI:106676 (PMID:17507568) RGD PMID:17507568 NCBI chr 8:91,908,548...91,918,020
Ensembl chr 8:91,908,576...91,912,731 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:106683 (PMID:17507568), (PMID:28814342) RGD PMID:17507568 PMID:28814342 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5467393 (PMID:23090999)		 Ensembl
RGD		 PMID:23090999 GO_REF:0000107 NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707 		JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO UniProtKB:Q7TPD3 (MGI:3702250|PMID:17360927) RGD PMID:17360927 MGI:3702250 NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203 		JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (MGI:3702250|PMID:17360927) RGD PMID:17360927 MGI:3702250 NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536 		JBrowse link
G Sall3 spalt-like transcription factor 3 acts_upstream_of_or_within ISO MGI:3052730 (PMID:18260139) RGD PMID:18260139 NCBI chr18:74,406,066...74,425,974
Ensembl chr18:74,407,560...74,426,789 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA		 (MGI:5285122|PMID:21539518)
GO_REF:0000107		 RGD
Ensembl		 PMID:21539518 GO_REF:0000107 MGI:5285122 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within ISO MGI:5467393 (PMID:23090999) RGD PMID:23090999 NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO (PMID:18184563) RGD PMID:18184563 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2180475 (PMID:25937343)		 Ensembl
RGD		 PMID:25937343 GO_REF:0000107 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3527369|PMID:15543145)		 UniProt
Ensembl
RGD		 PMID:15543145 GO_REF:0000024 GO_REF:0000107 MGI:3527369 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (PMID:11060228) RGD PMID:11060228 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105 		JBrowse link
G Mir200a microRNA 200a acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 5:166,648,494...166,648,582 JBrowse link
G Mir200b microRNA 200b acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366 		JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 1:133,440,049...133,440,138 JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO (MGI:4420747|PMID:18024993) RGD PMID:18024993 MGI:4420747 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Uncx UNC homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1928812 (PMID:20692344)		 Ensembl
RGD		 PMID:20692344 GO_REF:0000107 NCBI chr12:15,092,779...15,097,300
Ensembl chr12:15,092,784...15,097,300 		JBrowse link
olfactory bulb mitral cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogdh oxoglutarate dehydrogenase involved_in ISO
IEA		 (MGI:3662936|PMID:16901643)
GO_REF:0000107		 RGD
Ensembl		 PMID:16901643 GO_REF:0000107 MGI:3662936 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479 		JBrowse link
G Pax6 paired box 6 IMP RGD PMID:14736749 RGD:8552333 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO (PMID:18024993) RGD PMID:18024993 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
olfactory cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO (MGI:2664023|PMID:12805306) RGD PMID:12805306 MGI:2664023 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544 		JBrowse link
olfactory lobe development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within ISO MGI:5467393 (PMID:23090999) RGD PMID:23090999 NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2675580 (PMID:12926013) RGD PMID:12926013 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) acts_upstream_of_or_within ISO MGI:2683867 (PMID:12879062) RGD PMID:12879062 NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536 		JBrowse link
orbitofrontal cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpc5 actin related protein 2/3 complex, subunit 5 IEP RGD PMID:23459330 RGD:11049475 NCBI chr13:64,904,504...64,913,413
Ensembl chr13:64,887,136...64,913,410 		JBrowse link
G Drd1 dopamine receptor D1 IEP RGD PMID:22015925 RGD:7248608 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Drd2 dopamine receptor D2 IEP RGD PMID:22015925 RGD:7248608 NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 involved_in ISO (MGI:4452541|PMID:20410112) RGD PMID:20410112 MGI:4452541 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in ISO (MGI:4452541|PMID:20410112) RGD PMID:20410112 MGI:4452541 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Reln reelin IEP RGD PMID:20035841 RGD:2317761 NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
pallium cell proliferation in forebrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 acts_upstream_of_or_within ISO MGI:3043746 (PMID:24192035) RGD PMID:24192035 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129 		JBrowse link
pallium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (PMID:16613831) RGD PMID:16613831 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:10409502) RGD PMID:10409502 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856158 (PMID:11124115) RGD PMID:11124115 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
pituitary gland development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1 adenylate cyclase activating polypeptide 1 IEP RGD PMID:18160680 RGD:2325274 NCBI chr 9:113,102,632...113,122,500
Ensembl chr 9:113,103,718...113,109,773 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 IEP RGD PMID:17180597 RGD:2306413 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 IEP RGD PMID:17180597 RGD:2306413 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857137 (PMID:9806931)		 Ensembl
RGD		 PMID:9806931 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158342|MGI:2158390 (PMID:17359964) RGD PMID:17359964 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Cdh1 cadherin 1 IEP RGD PMID:17373711 RGD:2289637 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO MGI:2176173|MGI:2181395 (PMID:16141355) RGD PMID:16141355 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816 		JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor IEP RGD PMID:8946059 RGD:2313681 NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (PMID:11062007) RGD PMID:11062007 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:2179995|MGI:3628639 (PMID:16543408) RGD PMID:16543408 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO MGI:95728 (PMID:10725236) RGD PMID:10725236 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:95727 (PMID:10725236) RGD PMID:10725236 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:104876|MGI:2149672 (PMID:17015435), (PMID:17426285) RGD PMID:17015435 PMID:17426285 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hesx1 HESX homeobox 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:26781211)
MGI:102764|MGI:1931124|MGI:3822474|MGI:3822475 (PMID:11731482), (PMID:18775421), (PMID:19093031), (PMID:20181723), (PMID:9620767)
GO_REF:0000033		 RGD
GO_Central		 PMID:9620767 PMID:11731482 PMID:18775421 PMID:19093031 PMID:20181723 More... GO_REF:0000033 NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO MGI:1856426 (PMID:504232) RGD PMID:504232 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Inhbb inhibin subunit beta B IEP RGD PMID:18160680 RGD:2325274 NCBI chr13:30,530,860...30,536,566
Ensembl chr13:30,530,860...30,537,832 		JBrowse link
G Isl1 ISL LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2182246 (PMID:9806931)		 Ensembl
RGD		 PMID:9806931 GO_REF:0000107 NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584 		JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO MGI:3711561 (PMID:17392792) RGD PMID:17392792 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO MGI:2385819 (PMID:18037398) RGD PMID:18037398 NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480 		JBrowse link
G Msx1 msh homeobox 1 IEP RGD PMID:16451220 RGD:5132608 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857494 (PMID:9806931)		 Ensembl
RGD		 PMID:9806931 GO_REF:0000107 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1862000 (PMID:17359964)		 Ensembl
RGD		 PMID:17359964 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856155|MGI:1934347 (PMID:10588713)		 Ensembl
RGD		 PMID:10588713 GO_REF:0000107 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 IEP RGD PMID:15208361 RGD:2308902 NCBI chr 2:4,395,543...4,442,434
Ensembl chr 2:4,395,543...4,442,434 		JBrowse link
G Pitx1 paired-like homeodomain 1 acts_upstream_of_or_within ISO MGI:1934200 (PMID:10049363) RGD PMID:10049363 NCBI chr17:8,794,134...8,800,292
Ensembl chr17:8,794,134...8,800,291 		JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857844|MGI:1857846|MGI:2384494 (PMID:10498698), (PMID:10499586) RGD PMID:10498698 PMID:10499586 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO MGI:1856024 (PMID:16556738) RGD PMID:16556738 NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801 		JBrowse link
G Prop1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO MGI:1856842 (PMID:11731482) RGD PMID:11731482 NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3583755 (PMID:17015435) RGD PMID:17015435 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353 		JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO (PMID:12065233) RGD PMID:12065233 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
G Six3 SIX homeobox 3 involved_in
acts_upstream_of_or_within		 ISO (MGI:3821506|PMID:18775421)
MGI:96071 (PMID:18775421)		 RGD PMID:18775421 MGI:3821506 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in ISO (PMID:18285410) RGD PMID:18285410 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Sox3 SRY-box transcription factor 3 involved_in ISO (MGI:3033563|PMID:14981518) RGD PMID:14981518 MGI:3033563 NCBI chr  X:139,308,608...139,310,687
Ensembl chr  X:139,309,329...139,310,678 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461 		JBrowse link
G Tbx19 T-box transcription factor 19 acts_upstream_of_or_within ISO (PMID:11447259) RGD PMID:11447259 NCBI chr13:77,450,848...77,484,475
Ensembl chr13:77,450,849...77,504,163 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:1926344 (PMID:17919533) RGD PMID:17919533 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
pons development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in ISO (MGI:3662936|PMID:16901643) RGD PMID:16901643 MGI:3662936 NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169 		JBrowse link
pons maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO MGI:1928270 (PMID:8313466) RGD PMID:8313466 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603 		JBrowse link
positive regulation of cell proliferation in midbrain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pitx3 paired-like homeodomain 3 IDA RGD PMID:18385323 RGD:11535083 NCBI chr 1:245,001,106...245,013,881
Ensembl chr 1:245,001,164...245,013,892 		JBrowse link
G Ryk receptor-like tyrosine kinase involved_in IMP PMID:23517308 ParkinsonsUK-UCL PMID:23517308 RGD:11054651 NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698 		JBrowse link
positive regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egf epidermal growth factor acts_upstream_of_or_within ISO (PMID:10027293) RGD PMID:10027293 NCBI chr 2:218,219,408...218,302,359
Ensembl chr 2:218,219,415...218,302,064 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:10027293) RGD PMID:10027293 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Gpr37l1 G protein-coupled receptor 37-like 1 acts_upstream_of_or_within ISO MGI:5439169 (PMID:24062445) RGD PMID:24062445 NCBI chr13:46,598,574...46,605,421
Ensembl chr13:46,598,578...46,605,421 		JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO (PMID:10027293) RGD PMID:10027293 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:10027293)		 Ensembl
RGD		 PMID:10027293 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
positive regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prox1 prospero homeobox 1 involved_in ISO (MGI:4849596|PMID:20808958) RGD PMID:20808958 MGI:4849596 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
positive regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in ISO (MGI:4948425|PMID:21347250) RGD PMID:21347250 MGI:4948425 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:20083104 RGD:2325172 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
principal sensory nucleus of trigeminal nerve development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kirrel3 kirre like nephrin family adhesion molecule 3 acts_upstream_of_or_within ISO (PMID:21241806) RGD PMID:21241806 NCBI chr 8:32,865,779...33,407,555
Ensembl chr 8:32,862,776...33,405,676 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:1856965|MGI:3510641 (PMID:16819976), (PMID:16956587) RGD PMID:16819976 PMID:16956587 NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930 		JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:12605461 RGD:12790706 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Nfib nuclear factor I/B involved_in ISS
ISO		 GO_REF:0000024
(MGI:5284754|PMID:19107796)		 UniProt
RGD		 PMID:19107796 GO_REF:0000024 MGI:5284754 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479 		JBrowse link
prolactin secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO MGI:2385819 (PMID:8638120) RGD PMID:8638120 NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480 		JBrowse link
putamen development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp2 forkhead box P2 involved_in ISO
IEA		 (PMID:11872605)
GO_REF:0000107		 RGD
Ensembl		 PMID:11872605 GO_REF:0000107 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683 		JBrowse link
pyramidal neuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2386545|MGI:3587769 (PMID:16625205) RGD PMID:16625205 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593 		JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO MGI:1856466 (PMID:2473662) RGD PMID:2473662 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Dclk2 doublecortin-like kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1277171 (PMID:19342486)		 Ensembl
RGD		 PMID:19342486 GO_REF:0000107 NCBI chr 2:172,202,733...172,338,411
Ensembl chr 2:172,208,706...172,338,250 		JBrowse link
G Dcx doublecortin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1918012 (PMID:19342486)		 Ensembl
RGD		 PMID:19342486 GO_REF:0000107 NCBI chr  X:107,430,767...107,573,612
Ensembl chr  X:107,430,767...107,507,476 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in ISO (MGI:4452541|PMID:20410112) RGD PMID:20410112 MGI:4452541 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO
IEA		 (MGI:3662936|PMID:16901643)
GO_REF:0000107		 RGD
Ensembl		 PMID:16901643 GO_REF:0000107 MGI:3662936 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479 		JBrowse link
G Plxna3 plexin A3 acts_upstream_of_or_within ISO MGI:2386961 (PMID:11683995) RGD PMID:11683995 NCBI chr  X:152,115,699...152,131,608
Ensembl chr  X:152,115,819...152,131,603 		JBrowse link
G Scyl2 SCY1 like pseudokinase 2 involved_in ISO (MGI:5694521|PMID:26203146) RGD PMID:26203146 MGI:5694521 NCBI chr 7:24,064,404...24,117,338
Ensembl chr 7:24,064,404...24,117,305 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3774019 (PMID:18165320)		 Ensembl
RGD		 PMID:18165320 GO_REF:0000107 NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in ISO (MGI:3662936|PMID:16901643) RGD PMID:16901643 MGI:3662936 NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169 		JBrowse link
pyramidal neuron migration to cerebral cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Disc1 DISC1 scaffold protein IMP RGD PMID:16299498 RGD:5509783 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778 		JBrowse link
G Foxg1 forkhead box G1 acts_upstream_of_or_within ISO (PMID:22726835) RGD PMID:22726835 NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607 		JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 involved_in ISO (PMID:30639322) RGD PMID:30639322 NCBI chr16:1,027,083...1,232,616
Ensembl chr16:1,027,325...1,232,597 		JBrowse link
radial glia guided migration of cerebellar granule cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cend1 cell cycle exit and neuronal differentiation 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:4831137 (PMID:20153830)		 GO_Central
RGD		 PMID:20153830 GO_REF:0000033 NCBI chr 1:196,525,153...196,528,152
Ensembl chr 1:196,523,920...196,528,302 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:10624947) RGD PMID:10624947 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966 		JBrowse link
radial glia guided migration of Purkinje cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna2 catenin alpha 2 involved_in ISO (MGI:2181860|PMID:12089526), (MGI:3621696|PMID:12123610) RGD PMID:12089526 PMID:12123610 MGI:2181860 MGI:3621696 NCBI chr 4:109,294,249...110,443,409
Ensembl chr 4:109,293,978...110,443,522 		JBrowse link
G Cul5 cullin 5 acts_upstream_of_or_within ISO (PMID:24210661) RGD PMID:24210661 NCBI chr 8:54,012,963...54,066,751
Ensembl chr 8:54,016,006...54,066,666 		JBrowse link
G Dab1 DAB adaptor protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1337096|MGI:1861918 (PMID:24210661), (PMID:9338785)		 Ensembl
RGD		 PMID:9338785 PMID:24210661 GO_REF:0000107 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552 		JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4838182 (PMID:22357600)		 Ensembl
RGD		 PMID:22357600 GO_REF:0000107 NCBI chr 7:108,810,627...109,054,420
Ensembl chr 7:108,810,628...109,054,691 		JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO MGI:3577419 (PMID:24466353) RGD PMID:24466353 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677 		JBrowse link
G Rnf7 ring finger protein 7 acts_upstream_of_or_within ISO MGI:108554 (PMID:24210661) RGD PMID:24210661 NCBI chr 8:97,038,845...97,048,080
Ensembl chr 8:97,038,840...97,047,824 		JBrowse link
G Socs7 suppressor of cytokine signaling 7 acts_upstream_of_or_within ISO (PMID:24210661) RGD PMID:24210661 NCBI chr10:82,352,159...82,388,829
Ensembl chr10:82,351,680...82,388,830 		JBrowse link
regulation of cerebellar granule cell precursor proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Skor2 SKI family transcriptional corepressor 2 acts_upstream_of_or_within ISO MGI:5300464 (PMID:21937600) RGD PMID:21937600 NCBI chr18:70,404,431...70,446,330
Ensembl chr18:70,404,489...70,440,342 		JBrowse link
regulation of forebrain neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:4818492 (PMID:22991444) RGD PMID:22991444 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
regulation of midbrain dopaminergic neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled-related protein 1 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:P97299 (MGI:5448935|PMID:22290867)		 Ensembl
RGD		 PMID:22290867 GO_REF:0000107 MGI:5448935 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO UniProtKB:Q8C4U3 (MGI:5448935|PMID:22290867) RGD PMID:22290867 MGI:5448935 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
regulation of timing of subpallium neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (PMID:9876181) RGD PMID:9876181 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
retrotrapezoid nucleus neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phox2b paired-like homeobox 2b involved_in ISO (MGI:4418003|PMID:19940179) RGD PMID:19940179 MGI:4418003 NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978 		JBrowse link
rhombomere 2 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634 (PMID:16651541) RGD PMID:16651541 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857626 (PMID:7508007)		 Ensembl
RGD		 PMID:7508007 GO_REF:0000107 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
rhombomere 3 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:96170 (PMID:9806922) RGD PMID:9806922 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:1857504|MGI:95296 (PMID:9806922) RGD PMID:9806922 NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within ISO MGI:96183 (PMID:7508007) RGD PMID:7508007 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:96174 (PMID:10230789) RGD PMID:10230789 NCBI chr10:81,317,828...81,320,220
Ensembl chr10:81,318,026...81,320,192 		JBrowse link
rhombomere 3 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (PMID:7903221) RGD PMID:7903221 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
rhombomere 3 morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857626 (PMID:10230789)		 Ensembl
RGD		 PMID:10230789 GO_REF:0000107 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
rhombomere 3 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:52248|PMID:8093858)		 UniProt
RGD		 PMID:8093858 GO_REF:0000024 MGI:52248 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
rhombomere 4 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:1857504|MGI:96182 (PMID:10529420), (PMID:8102800), (PMID:9806922) RGD PMID:8102800 PMID:9806922 PMID:10529420 NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:96170 (PMID:10529420) RGD PMID:10529420 NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836 		JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO MGI:96174 (PMID:10230789) RGD PMID:10230789 NCBI chr10:81,317,828...81,320,220
Ensembl chr10:81,318,026...81,320,192 		JBrowse link
rhombomere 5 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO MGI:1857504|MGI:96182 (PMID:10529420), (PMID:8102800), (PMID:9806922) RGD PMID:8102800 PMID:9806922 PMID:10529420 NCBI chr 4:81,255,814...81,258,587
Ensembl chr 4:81,255,883...81,258,504 		JBrowse link
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO MGI:96170 (PMID:10529420) RGD PMID:10529420 NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836 		JBrowse link
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:1856419 (PMID:7925021) RGD PMID:7925021 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031 		JBrowse link
rhombomere 5 formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (PMID:7903221) RGD PMID:7903221 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
rhombomere 5 structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egr2 early growth response 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:52248|PMID:8093858), (MGI:6393337|PMID:11823429)		 UniProt
RGD		 PMID:8093858 PMID:11823429 GO_REF:0000024 MGI:52248 MGI:6393337 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
rhombomere 6 development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mafb MAF bZIP transcription factor B acts_upstream_of_or_within ISO MGI:1856419 (PMID:7925021) RGD PMID:7925021 NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031 		JBrowse link
rhombomere development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxb1 homeo box B1 acts_upstream_of_or_within ISO (PMID:21320481) RGD PMID:21320481 NCBI chr10:81,331,507...81,332,928
Ensembl chr10:81,331,507...81,332,836 		JBrowse link
G Hoxb3 homeo box B3 acts_upstream_of_or_within ISO (PMID:21320481) RGD PMID:21320481 NCBI chr10:81,258,739...81,314,134
Ensembl chr10:81,299,357...81,313,107 		JBrowse link
rhombomere morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 IMP RGD PMID:21501682 RGD:8552349 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
somatotropin secreting cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrhr growth hormone releasing hormone receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856425 (PMID:6116352), (PMID:6194978)		 Ensembl
RGD		 PMID:6116352 PMID:6194978 GO_REF:0000107 NCBI chr 4:84,498,159...84,532,851
Ensembl chr 4:84,500,212...84,532,776 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO MGI:2158737 (PMID:17015435) RGD PMID:17015435 NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801 		JBrowse link
somatotropin secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO MGI:2385819 (PMID:8638120) RGD PMID:8638120 NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480 		JBrowse link
G Pou1f1 POU class 1 homeobox 1 acts_upstream_of_or_within ISO MGI:1856024 (PMID:1334535), (PMID:6194978) RGD PMID:1334535 PMID:6194978 NCBI chr11:3,316,818...3,334,804
Ensembl chr11:3,317,058...3,334,801 		JBrowse link
G Prop1 PROP paired-like homeobox 1 acts_upstream_of_or_within ISO MGI:1856842 (PMID:6194978) RGD PMID:6194978 NCBI chr10:35,271,959...35,274,434
Ensembl chr10:35,271,973...35,274,434 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO MGI:1857453 (PMID:18351662) RGD PMID:18351662 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
striatal medium spiny neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BCL11 transcription factor B acts_upstream_of_or_within ISO MGI:2663971 (PMID:18199763) RGD PMID:18199763 NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224 		JBrowse link
G Inhba inhibin subunit beta A involved_in ISO (PMID:25804741) RGD PMID:25804741 NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:4948759|PMID:21423165)
GO_REF:0000024		 Ensembl
RGD
BHF-UCL		 PMID:21423165 GO_REF:0000024 GO_REF:0000107 MGI:4948759 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374 		JBrowse link
G Zswim6 zinc finger, SWIM-type containing 6 involved_in ISO (MGI:6140923|PMID:28433741) RGD PMID:28433741 MGI:6140923 NCBI chr 2:39,211,131...39,378,877
Ensembl chr 2:39,212,949...39,378,924 		JBrowse link
striatum development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672 (PMID:18032602) RGD PMID:18032602 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (PMID:18032602) RGD PMID:18032602 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:18032602) RGD PMID:18032602 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179893) RGD PMID:18179893 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within
involved_in		 IEP
ISO
IEA		 MGI:2181426|MGI:3707260 (PMID:17360497)
GO_REF:0000107		 RGD
Ensembl		 PMID:17360497 PMID:22015925 GO_REF:0000107, RGD:7248608 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Drd2 dopamine receptor D2 IEP RGD PMID:22015925 RGD:7248608 NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Foxp1 forkhead box P1 IEP RGD PMID:12815709 RGD:11536004 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857299 (PMID:9886073)		 Ensembl
RGD		 PMID:9886073 GO_REF:0000107 NCBI chr  X:132,736,175...132,768,149
Ensembl chr  X:132,736,096...132,768,154 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2177751|MGI:2177753|MGI:2177757 (PMID:11030759), (PMID:17715336) RGD PMID:11030759 PMID:17715336 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 IEP RGD PMID:18272292 RGD:13462055 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:12605461 RGD:12790706 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (PMID:18032602) RGD PMID:18032602 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162 		JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO
IEA		 (MGI:3662936|PMID:16901643)
GO_REF:0000107		 RGD
Ensembl		 PMID:16901643 GO_REF:0000107 MGI:3662936 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479 		JBrowse link
G Rarb retinoic acid receptor, beta acts_upstream_of_or_within ISO MGI:1857851 (PMID:18443282) RGD PMID:18443282 NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288 		JBrowse link
G Secisbp2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2181426|MGI:5583885 (PMID:24844465)		 Ensembl
RGD		 PMID:24844465 GO_REF:0000107 NCBI chr17:13,538,513...13,569,573
Ensembl chr17:13,538,513...13,569,523 		JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:1857061 (PMID:17035536) RGD PMID:17035536 NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536 		JBrowse link
G Slitrk5 SLIT and NTRK-like family, member 5 acts_upstream_of_or_within ISO MGI:4459459 (PMID:20418887) RGD PMID:20418887 NCBI chr15:88,848,123...88,858,809
Ensembl chr15:88,847,535...88,856,836 		JBrowse link
subpallium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:94902|MGI:95843 (PMID:23042297)		 Ensembl
RGD		 PMID:23042297 GO_REF:0000107 NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780 		JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:94901|MGI:95843 (PMID:23042297)		 Ensembl
RGD		 PMID:23042297 GO_REF:0000107 NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (PMID:16613831) RGD PMID:16613831 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856282 (PMID:20943929) RGD PMID:20943929 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:94901|MGI:94902 (PMID:23042297) RGD PMID:23042297 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105 		JBrowse link
subpallium neuron fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (PMID:9876181) RGD PMID:9876181 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (PMID:11124115) RGD PMID:11124115 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105 		JBrowse link
substantia nigra development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877 		JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:193,424,138...193,435,418
Ensembl chr 2:193,424,047...193,435,418 		JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr11:23,881,594...23,889,581
Ensembl chr11:23,881,592...23,889,119 		JBrowse link
G Basp1 brain abundant, membrane attached signal protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:75,816,130...75,863,801
Ensembl chr 2:75,816,122...75,864,043 		JBrowse link
G Calm1 calmodulin 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
Ensembl chr15:7,091,567...7,104,287 		JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207 		JBrowse link
G Ccdc14 coiled-coil domain containing 14 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr11:66,052,063...66,087,915
Ensembl chr11:66,052,620...66,087,956 		JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111 		JBrowse link
G Ckb creatine kinase B involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 6:130,729,420...130,732,301
Ensembl chr 6:130,729,423...130,732,315 		JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr10:85,511,164...85,517,723
Ensembl chr10:85,511,160...85,517,720 		JBrowse link
G Cox6b1 cytochrome c oxidase subunit 6B1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:85,875,080...85,884,081
Ensembl chr 1:85,875,109...85,884,001
Ensembl chr 2:85,875,109...85,884,001 		JBrowse link
G Dynll1 dynein light chain LC8-type 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr12:41,312,365...41,316,157
Ensembl chr12:41,312,367...41,314,741 		JBrowse link
G Eno3 enolase 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr10:55,370,531...55,375,921
Ensembl chr10:55,366,975...55,375,921 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO MGI:1857458 (PMID:17234579) RGD PMID:17234579 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Fgf9 fibroblast growth factor 9 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (PMID:17234579) RGD PMID:17234579 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341 		JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:152,201,081...152,220,863
Ensembl chr  X:152,201,098...152,220,801 		JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957 		JBrowse link
G Gnb4 G protein subunit beta 4 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:115,360,746...115,400,680
Ensembl chr 2:115,364,918...115,400,579 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891 		JBrowse link
G Ina internexin neuronal intermediate filament protein, alpha involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:245,896,775...245,908,330
Ensembl chr 1:245,896,775...245,908,330 		JBrowse link
G Ldha lactate dehydrogenase A involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:97,371,823...97,381,247
Ensembl chr 1:97,366,021...97,433,472 		JBrowse link
G Mag myelin-associated glycoprotein involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656 		JBrowse link
G Maob monoamine oxidase B involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:5,907,327...6,010,996
Ensembl chr  X:5,907,266...6,011,003 		JBrowse link
G Mapkap1 MAPK associated protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:17,715,813...17,918,387
Ensembl chr 3:17,715,834...17,918,384 		JBrowse link
G Mbp myelin basic protein involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr18:75,855,878...75,966,404
Ensembl chr18:75,855,878...75,966,404 		JBrowse link
G Ndrg2 NDRG family member 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr15:24,600,981...24,609,621
Ensembl chr15:24,600,982...24,609,626 		JBrowse link
G Ndufs3 NADH:ubiquinone oxidoreductase core subunit S3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:76,876,646...76,883,824
Ensembl chr 3:76,876,646...76,883,824 		JBrowse link
G Padi2 peptidyl arginine deiminase 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 5:153,209,053...153,251,632
Ensembl chr 5:153,209,053...153,251,632 		JBrowse link
G Plp1 proteolipid protein 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr  X:100,184,039...100,201,035
Ensembl chr  X:100,185,767...100,201,032 		JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:59,461,597...59,469,707
Ensembl chr 2:59,461,607...59,469,689 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
G S100a1 S100 calcium binding protein A1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:175,993,922...175,998,765
Ensembl chr 2:175,993,922...175,999,544 		JBrowse link
G Sec16a SEC16 homolog A, endoplasmic reticulum export factor involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 3:9,229,687...9,264,837
Ensembl chr 3:9,229,687...9,264,273 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975 		JBrowse link
G Suds3 SDS3 homolog, SIN3A corepressor complex component involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr12:39,477,181...39,499,633
Ensembl chr12:39,477,568...39,499,628 		JBrowse link
G Syngr3 synaptogyrin 3 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr10:13,710,553...13,715,309
Ensembl chr10:13,704,998...13,715,669 		JBrowse link
G Sypl2 synaptophysin-like 2 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 2:195,849,062...195,863,794
Ensembl chr 2:195,849,062...195,863,794 		JBrowse link
G Ttbk1 tau tubulin kinase 1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 9:14,493,166...14,538,372
Ensembl chr 9:14,493,389...14,535,774 		JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr14:41,485,031...41,495,590
Ensembl chr14:41,485,031...41,495,590 		JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr10:60,584,665...60,622,352
Ensembl chr10:60,584,652...60,671,589 		JBrowse link
G Ywhah tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr14:77,696,332...77,705,715
Ensembl chr14:77,696,333...77,705,741 		JBrowse link
G Ywhaq tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr 6:40,935,714...40,966,240
Ensembl chr 6:40,935,949...40,966,273 		JBrowse link
G Zfp148 zinc finger protein 148 involved_in ISO (PMID:22926577) UniProt PMID:22926577 NCBI chr11:67,276,455...67,385,803
Ensembl chr11:67,281,707...67,385,772 		JBrowse link
subthalamic nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:1857846 (PMID:18206388) RGD PMID:18206388 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293 		JBrowse link
subthalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in ISO (MGI:3662936|PMID:16901643) RGD PMID:16901643 MGI:3662936 NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169 		JBrowse link
superior olivary nucleus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 acts_upstream_of_or_within ISO MGI:1330828 (PMID:11517264) RGD PMID:11517264 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456 		JBrowse link
G Cdk5r2 cyclin-dependent kinase 5 regulatory subunit 2 acts_upstream_of_or_within ISO MGI:101764 (PMID:11517264) RGD PMID:11517264 NCBI chr 9:76,416,251...76,417,719
Ensembl chr 9:76,416,062...76,418,344 		JBrowse link
superior temporal gyrus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179893) RGD PMID:18179893 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO
IEA		 (PMID:19581563)
GO_REF:0000107		 RGD
Ensembl		 PMID:19581563 GO_REF:0000107 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
tangential migration from the subventricular zone to the olfactory bulb term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:20083104 RGD:2325172 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:21168496) RGD PMID:21168496 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO
IEA		 (MGI:3662936|PMID:16901643)
GO_REF:0000107		 RGD
Ensembl		 PMID:16901643 GO_REF:0000107 MGI:3662936 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479 		JBrowse link
G Slit1 slit guidance ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2179459 (PMID:14960623)		 Ensembl
RGD		 PMID:14960623 GO_REF:0000107 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2181426|MGI:2385464 (PMID:15837932) RGD PMID:15837932 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
telencephalon cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl12 C-X-C motif chemokine ligand 12 IMP RGD PMID:16971524 RGD:2306584 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:16971524 RGD:2306584 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883 		JBrowse link
G Foxb1 forkhead box B1 involved_in ISO (MGI:4887555|PMID:19046377) RGD PMID:19046377 MGI:4887555 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO MGI:3653645 (PMID:18786357), (PMID:20181579) RGD PMID:18786357 PMID:20181579 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Slit1 slit guidance ligand 1 acts_upstream_of_or_within ISO MGI:1315205 (PMID:14960623) RGD PMID:14960623 NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127 		JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO MGI:1315203 (PMID:14960623) RGD PMID:14960623 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948 		JBrowse link
G Tnr tenascin R involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2154583 (PMID:15034584)		 Ensembl
RGD		 PMID:15034584 GO_REF:0000107 NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641 		JBrowse link
telencephalon development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO MGI:95387 (PMID:25100583) RGD PMID:25100583 NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216 		JBrowse link
G Avpr1a arginine vasopressin receptor 1A IEP RGD PMID:11021977 RGD:2304223 NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215 		JBrowse link
G Avpr2 arginine vasopressin receptor 2 IEP RGD PMID:11021977 RGD:2304223 NCBI chr  X:151,633,501...151,636,155
Ensembl chr  X:151,633,522...151,635,989 		JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within ISO (PMID:9187146) RGD PMID:9187146 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:9187146) RGD PMID:9187146 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Cdh2 cadherin 2 acts_upstream_of_or_within ISO MGI:95387 (PMID:25100583) RGD PMID:25100583 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 acts_upstream_of_or_within ISO MGI:1928281|MGI:3043819 (PMID:18032654) RGD PMID:18032654 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:1314653|MGI:88355 (PMID:25100583) RGD PMID:25100583 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 IEP RGD PMID:12571115 RGD:2290000 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595 		JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:10024361 RGD:8662883 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G Fezf1 Fez family zinc finger 1 involved_in ISO (MGI:4454201|PMID:20431123) RGD PMID:20431123 MGI:4454201 NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078 		JBrowse link
G Fezf2 Fez family zinc finger 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:4454201|PMID:20431123)
MGI:104876|MGI:1920441 (PMID:20431123)		 RGD PMID:20431123 MGI:4454201 NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO MGI:1857843|MGI:2150348 (PMID:16613831) RGD PMID:16613831 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:10625551), (PMID:19036983), (PMID:19048639) RGD PMID:10625551 PMID:19036983 PMID:19048639 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gmppa GDP-mannose pyrophosphorylase A acts_upstream_of_or_within ISO (PMID:33755596) RGD PMID:33755596 NCBI chr 9:76,926,724...76,934,274
Ensembl chr 9:76,926,739...76,934,269 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:104876|MGI:2149672 (PMID:18579678), (PMID:19050759)		 Ensembl
RGD		 PMID:18579678 PMID:19050759 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:104853|MGI:1859823|MGI:1920441 (PMID:18579678), (PMID:20431123)		 UniProt
RGD		 PMID:18579678 PMID:20431123 GO_REF:0000024 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:3823090 (PMID:19036983) RGD PMID:19036983 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO MGI:3711317 (PMID:17325035) RGD PMID:17325035 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISO (MGI:5050079|PMID:7909549) RGD PMID:7909549 MGI:5050079 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617 		JBrowse link
G Lhx2 LIM homeobox 2 acts_upstream_of_or_within ISO MGI:1890208|MGI:4399044 (PMID:11165475), (PMID:11719201), (PMID:17493606), (PMID:19820705) RGD PMID:11165475 PMID:11719201 PMID:17493606 PMID:19820705 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908 		JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within ISO MGI:3765904 (PMID:17928865) RGD PMID:17928865 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319 		JBrowse link
G Nkx2-1 NK2 homeobox 1 acts_upstream_of_or_within ISO MGI:3653645 (PMID:18786356) RGD PMID:18786356 NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791 		JBrowse link
G Nrgn neurogranin IEP RGD PMID:8783271 RGD:9835396 NCBI chr 8:37,255,462...37,263,659
Ensembl chr 8:37,256,930...37,257,516 		JBrowse link
G Oxtr oxytocin receptor IEP RGD PMID:11021977 RGD:2304223 NCBI chr 4:145,598,549...145,614,674
Ensembl chr 4:145,599,561...145,614,674 		JBrowse link
G Pfdn1 prefoldin subunit 1 acts_upstream_of_or_within ISO MGI:3800373 (PMID:18566413) RGD PMID:18566413 NCBI chr18:28,014,145...28,067,148
Ensembl chr18:28,014,145...28,067,064 		JBrowse link
G Rfx4 regulatory factor X4 acts_upstream_of_or_within ISO MGI:3799278 (PMID:19887680) RGD PMID:19887680 NCBI chr 7:18,853,065...19,015,378
Ensembl chr 7:18,853,322...19,014,967 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 IEP RGD PMID:22331407 RGD:6484221 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
G Six3 SIX homeobox 3 involved_in
acts_upstream_of_or_within		 ISO (MGI:3813369|PMID:18694563)
MGI:2450901 (PMID:18094027)		 RGD PMID:18094027 PMID:18694563 MGI:3813369 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
G Slc1a2 solute carrier family 1 member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2449707 (PMID:9180080)		 Ensembl
RGD		 PMID:9180080 GO_REF:0000107 NCBI chr 3:89,005,129...89,135,469
Ensembl chr 3:89,005,129...89,126,498 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 IEP RGD PMID:12502534 RGD:2316981 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628 		JBrowse link
G Slc8a2 solute carrier family 8 member A2 IEP RGD PMID:12502534 RGD:2316981 NCBI chr 1:76,816,583...76,852,928
Ensembl chr 1:76,808,725...76,847,072 		JBrowse link
G Slc8a3 solute carrier family 8 member A3 IEP RGD PMID:11036162 RGD:2316983 NCBI chr 6:100,874,359...101,007,989
Ensembl chr 6:100,874,369...101,007,508 		JBrowse link
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO MGI:3716885 (PMID:16357211) RGD PMID:16357211 NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267 		JBrowse link
telencephalon regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:96785 (PMID:11719201)		 Ensembl
RGD		 PMID:11719201 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:96785 (PMID:11719201), (PMID:16855091)		 Ensembl
RGD		 PMID:11719201 PMID:16855091 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (PMID:18701439) RGD PMID:18701439 NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105 		JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1890208|MGI:88177|MGI:88180 (PMID:11719201)		 Ensembl
RGD		 PMID:11719201 GO_REF:0000107 NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908 		JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO MGI:2178753|MGI:3665330 (PMID:26166575) RGD PMID:26166575 NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416 		JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO MGI:1856155 (PMID:18701439) RGD PMID:18701439 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in		 IMP
ISO
IEA		 MGI:1857796 (PMID:11060228)
GO_REF:0000107		 RGD
Ensembl		 PMID:11060228 PMID:9811591 GO_REF:0000107, RGD:2306311 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (MGI:3813369|PMID:18694563) RGD PMID:18694563 MGI:3813369 NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301 		JBrowse link
thalamus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 acts_upstream_of_or_within ISO MGI:4356167 (PMID:23527305) RGD PMID:23527305 NCBI chr 1:80,572,790...80,601,936
Ensembl chr 1:80,572,796...80,601,918 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179893) RGD PMID:18179893 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Foxb1 forkhead box B1 involved_in ISO (MGI:1931655|PMID:11170346) RGD PMID:11170346 MGI:1931655 NCBI chr 8:70,407,221...70,409,841
Ensembl chr 8:70,408,186...70,409,781 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO MGI:1857634|MGI:3840448 (PMID:19279136) RGD PMID:19279136 NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212 		JBrowse link
G Kif5a kinesin family member 5A IEP RGD PMID:9349526 RGD:12792964 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (PMID:15342729) RGD PMID:15342729 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:12605461 RGD:12790706 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Ncam1 neural cell adhesion molecule 1 IDA RGD PMID:17292800 RGD:2326015 NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 acts_upstream_of_or_within ISO MGI:2677822 (PMID:11030619) RGD PMID:11030619 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032 		JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO
IEA		 (MGI:3662936|PMID:16901643)
GO_REF:0000107		 RGD
Ensembl		 PMID:16901643 GO_REF:0000107 MGI:3662936 NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479 		JBrowse link
G Olig2 oligodendrocyte transcription factor 2 acts_upstream_of_or_within ISO (PMID:19357274) RGD PMID:19357274 NCBI chr11:30,475,510...30,478,886
Ensembl chr11:30,475,398...30,480,152 		JBrowse link
G Ptchd1 patched domain containing 1 involved_in ISO (MGI:5779981|PMID:27007844) RGD PMID:27007844 MGI:5779981 NCBI chr  X:39,681,910...39,733,416
Ensembl chr  X:39,681,910...39,733,519 		JBrowse link
G Ptn pleiotrophin IEP RGD PMID:10051750 RGD:10043838 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:108075|MGI:1934268|MGI:2176173 (PMID:19357274)		 Ensembl
RGD		 PMID:19357274 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176173|MGI:3576373 (PMID:19357274)		 Ensembl
RGD		 PMID:19357274 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461 		JBrowse link
G Tal2 TAL bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:2684532 (PMID:11071772) RGD PMID:11071772 NCBI chr 5:68,411,012...68,417,569
Ensembl chr 5:68,411,012...68,417,569 		JBrowse link
G Uqcrq ubiquinol-cytochrome c reductase, complex III subunit VII involved_in ISO (MGI:3662936|PMID:16901643) RGD PMID:16901643 MGI:3662936 NCBI chr10:37,585,864...37,589,328
Ensembl chr10:37,586,888...37,589,169 		JBrowse link
third ventricle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(MGI:69165|PMID:7525597)		 Ensembl
RGD		 PMID:7525597 GO_REF:0000107 MGI:69165 NCBI chr10:54,318,698...54,324,933
Ensembl chr10:54,318,701...54,324,933 		JBrowse link
G Dpcd deleted in primary ciliary dyskinesia involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20080492)		 Ensembl
RGD		 PMID:20080492 GO_REF:0000107 NCBI chr 1:244,408,766...244,426,891
Ensembl chr 1:244,408,785...244,426,888 		JBrowse link
G Grcc10 gene rich cluster, C10 gene involved_in ISO (PMID:23453666) RGD PMID:23453666 NCBI chr 4:157,551,276...157,552,924 JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) RGD PMID:21220025 MGI:4949568 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386445 (PMID:11283949) RGD PMID:11283949 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165 		JBrowse link
thyroid-stimulating hormone-secreting cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:9463347)		 Ensembl
RGD		 PMID:9463347 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO (PMID:9463347) RGD PMID:9463347 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (PMID:9463347) RGD PMID:9463347 NCBI chr 1:244,584,477...244,590,578
Ensembl chr 1:244,584,652...244,590,359 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:2179995|MGI:3628639 (PMID:16543408) RGD PMID:16543408 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Lhx3 LIM homeobox 3 acts_upstream_of_or_within ISO MGI:2385819 (PMID:8638120) RGD PMID:8638120 NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480 		JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within ISO MGI:1857453 (PMID:18351662) RGD PMID:18351662 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
ventricular system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak8 adenylate kinase 8 acts_upstream_of_or_within ISO MGI:5429197 (PMID:21746835) RGD PMID:21746835 NCBI chr 3:12,028,895...12,144,468
Ensembl chr 3:12,028,954...12,144,465 		JBrowse link
G Anp32b acidic nuclear phosphoprotein 32 family member B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5003050 (PMID:21636789)		 Ensembl
RGD		 PMID:21636789 GO_REF:0000107 NCBI chr 5:60,743,077...60,765,726
Ensembl chr 5:60,743,443...60,765,717 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 acts_upstream_of_or_within ISO MGI:3767672|MGI:4837746|MGI:5474481 (PMID:23160237) RGD PMID:23160237 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:24695551) RGD PMID:24695551 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Ccdc134 coiled-coil domain containing 134 acts_upstream_of_or_within ISO MGI:6117856 (PMID:29115376) RGD PMID:29115376 NCBI chr 7:113,644,557...113,659,050
Ensembl chr 7:113,644,639...113,659,050 		JBrowse link
G Celsr2 cadherin, EGF LAG seven-pass G-type receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5429210 (PMID:21746835)		 Ensembl
RGD		 PMID:21746835 GO_REF:0000107 NCBI chr 2:196,029,206...196,053,848
Ensembl chr 2:196,029,434...196,053,845 		JBrowse link
G Cenpf centromere protein F involved_in ISO (PMID:25564561) RGD PMID:25564561 NCBI chr13:101,184,127...101,229,714
Ensembl chr13:101,184,127...101,229,669 		JBrowse link
G Coro1c coronin 1C acts_upstream_of_or_within ISO MGI:4419168 (PMID:29078390) RGD PMID:29078390 NCBI chr12:42,713,024...42,785,179
Ensembl chr12:42,712,991...42,785,179 		JBrowse link
G Dpcd deleted in primary ciliary dyskinesia acts_upstream_of_or_within ISO MGI:4262238 (PMID:21746835) RGD PMID:21746835 NCBI chr 1:244,408,766...244,426,891
Ensembl chr 1:244,408,785...244,426,888 		JBrowse link
G Hydin Hydin, axonemal central pair apparatus protein acts_upstream_of_or_within ISO MGI:1856913 (PMID:18250199), (PMID:4732188) RGD PMID:4732188 PMID:18250199 MGI:61244 MGI:61312 MGI:71926 NCBI chr19:38,236,996...38,583,271
Ensembl chr19:38,236,464...38,583,264 		JBrowse link
G Kif27 kinesin family member 27 acts_upstream_of_or_within ISO MGI:4318693 (PMID:21746835) RGD PMID:21746835 NCBI chr17:6,299,544...6,375,106
Ensembl chr17:6,299,569...6,369,768 		JBrowse link
G Mboat7 membrane bound O-acyltransferase domain containing 7 acts_upstream_of_or_within ISO MGI:5429211 (PMID:21746835) RGD PMID:21746835 NCBI chr 1:65,525,206...65,539,538
Ensembl chr 1:65,525,213...65,539,538 		JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO MGI:2158354 (PMID:18571096) RGD PMID:18571096 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase acts_upstream_of_or_within ISO MGI:3707001 (PMID:17276355) RGD PMID:17276355 NCBI chr 6:91,814,703...91,971,945
Ensembl chr 6:91,814,749...91,970,744 		JBrowse link
G Nme5 NME/NM23 family member 5 acts_upstream_of_or_within ISO MGI:5429195 (PMID:21746835) RGD PMID:21746835 NCBI chr18:26,163,558...26,180,742
Ensembl chr18:26,163,555...26,180,794 		JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 acts_upstream_of_or_within ISO MGI:5311373 (PMID:23849778) RGD PMID:23849778 NCBI chr17:55,216,877...55,409,872
Ensembl chr17:55,218,991...55,409,399 		JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3757825|PMID:17826737)		 UniProt
RGD		 PMID:17826737 GO_REF:0000024 MGI:3757825 NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247 		JBrowse link
G Sema6d semaphorin 6D acts_upstream_of_or_within ISO (PMID:14977921) RGD PMID:14977921 NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094 		JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:1857061 (PMID:17035536) RGD PMID:17035536 NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536 		JBrowse link
G Spag6l sperm associated antigen 6-like acts_upstream_of ISO MGI:2662475 (PMID:12167721) RGD PMID:12167721 NCBI chr11:84,173,628...84,269,374
Ensembl chr11:84,173,526...84,269,364 		JBrowse link
G Ttc21b tetratricopeptide repeat domain 21B acts_upstream_of_or_within ISO MGI:2152544 (PMID:19732765) RGD PMID:19732765 NCBI chr 3:50,861,367...50,935,880
Ensembl chr 3:50,861,367...50,935,903 		JBrowse link
G Ttn titin acts_upstream_of_or_within ISO MGI:3763610 (PMID:17360664) RGD PMID:17360664 NCBI chr 3:61,652,432...61,924,912
Ensembl chr 3:61,652,439...61,924,741 		JBrowse link
G Ulk4 unc-51 like kinase 4 acts_upstream_of_or_within ISO MGI:5429194 (PMID:21746835) RGD PMID:21746835 NCBI chr 8:120,670,879...120,966,026
Ensembl chr 8:120,670,866...120,966,924 		JBrowse link
G Wdr89 WD repeat domain 89 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4944354 (PMID:29078390)		 Ensembl
RGD		 PMID:29078390 GO_REF:0000107 NCBI chr 6:94,350,468...94,382,085
Ensembl chr 6:94,350,303...94,382,026 		JBrowse link
ventricular zone neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dct dopachrome tautomerase acts_upstream_of_or_within ISO (PMID:16857183) RGD PMID:16857183 NCBI chr15:95,062,006...95,100,863
Ensembl chr15:95,062,003...95,100,836 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 involved_in ISO (MGI:4452541|PMID:20410112) RGD PMID:20410112 MGI:4452541 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 involved_in ISO (MGI:4452541|PMID:20410112) RGD PMID:20410112 MGI:4452541 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
vestibular nucleus development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857470 (PMID:12885554) RGD PMID:12885554 NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993 		JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856210 (PMID:8719615) RGD PMID:8719615 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225 		JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO MGI:1857442 (PMID:11223304) RGD PMID:11223304 NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901 		JBrowse link
Wnt signaling pathway involved in forebrain neuroblast division term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191|MGI:96770 (PMID:14715945), (PMID:16920270) RGD PMID:14715945 PMID:16920270 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857489 (PMID:10631167) RGD PMID:10631167 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19694
    developmental process 6963
      anatomical structure development 6486
        animal organ development 3650
          brain development 900
            brain morphogenesis + 46
            brain segmentation 3
            central complex development 0
            forebrain development + 555
            hindbrain development + 229
            midbrain development + 97
            midbrain-hindbrain boundary development + 9
            mushroom body development 0
            trigeminal sensory nucleus development + 4
            ventricular system development + 38
Path 2
Term Annotations click to browse term
  biological_process 19694
    developmental process 6963
      anatomical structure development 6486
        multicellular organism development 5239
          system development 4526
            nervous system development 2801
              central nervous system development 1203
                brain development 900
                  brain morphogenesis + 46
                  brain segmentation 3
                  central complex development 0
                  forebrain development + 555
                  hindbrain development + 229
                  midbrain development + 97
                  midbrain-hindbrain boundary development + 9
                  mushroom body development 0
                  trigeminal sensory nucleus development + 4
                  ventricular system development + 38
paths to the root