Advanced Search (OLGA)

Gene: Gak (cyclin G associated kinase) Rattus norvegicus

Analyze

Symbol:

Gak

Name:

cyclin G associated kinase

RGD ID:

621589

Description:

Enables cyclin binding activity. Predicted to be involved in several processes, including Golgi to lysosome transport; clathrin coat disassembly; and regulation of clathrin coat assembly. Predicted to act upstream of or within several processes, including establishment of skin barrier; forebrain morphogenesis; and intrahepatic bile duct development. Predicted to be located in Golgi apparatus and clathrin-coated vesicle. Predicted to be active in cytoplasm and vesicle. Orthologous to human GAK (cyclin G associated kinase); INTERACTS WITH 3H-1,2-dithiole-3-thione; ammonium chloride; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

cyclin G-associated kinase; cyclin-G-associated kinase; dnaJ homolog subfamily C member 26

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GAK (cyclin G associated kinase)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Gak (cyclin G associated kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Gak (cyclin G associated kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GAK (cyclin G associated kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GAK (cyclin G associated kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Gak (cyclin G associated kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GAK (cyclin G associated kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	GAK (cyclin G associated kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Gak (cyclin G associated kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Gak (cyclin G associated kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	CPLX1 (complexin 1)	HGNC	PhylomeDB, Treefam
Homo sapiens (human):	NEK7 (NIMA related kinase 7)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	GAK (cyclin G associated kinase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Gak (cyclin G associated kinase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	gak (cyclin G associated kinase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	aux	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	gakh-1	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	gak	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	1,234,272 - 1,308,492 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	14	1,234,266 - 1,323,974 (+)	Ensembl				GRCr8
mRatBN7.2	14	1,089,853 - 1,164,098 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	1,089,866 - 1,216,398 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	14	989,603 - 1,063,129 (+)	NCBI	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	2,291,381 - 2,364,893 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	988,076 - 1,061,600 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	14	982,267 - 1,055,786 (+)	NCBI
Lyon_Normotensive	14	981,189 - 1,054,708 (+)	NCBI
Lyon_Hypertensive	14	980,140 - 1,053,656 (+)	NCBI
F344_StmMcwi	14	1,261,860 - 1,335,142 (+)	NCBI
Rnor_6.0	14	2,100,104 - 2,174,332 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	2,100,106 - 2,174,318 (+)	Ensembl		Rnor_6.0 Ensembl	rn6	Rnor6.0
Rnor_5.0	14	2,095,637 - 2,168,946 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	14	1,630,890 - 1,710,373 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	14	1,129,213 - 1,203,494 (+)	NCBI		Celera
RGSC_v3.1	14	1,630,889 - 1,710,373 (+)	NCBI
Cytogenetic Map	14	p22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Breast Cancer, Familial (ISO)

cervical cancer (ISO)

clear cell renal cell carcinoma (ISO)

colon adenocarcinoma (ISO)

esophageal cancer (ISO)

head and neck squamous cell carcinoma (ISO)

hepatocellular carcinoma (ISO)

lung cancer (ISO)

lung squamous cell carcinoma (ISO)

melanoma (ISO)

nonpapillary renal cell carcinoma (ISO)

ovarian serous cystadenocarcinoma (ISO)

Parkinson's disease (ISO)

sarcoma (ISO)

stomach cancer (ISO)

thymoma (ISO)

Thyroid Carcinoma, Nonmedullary 1 (ISO)

uterine corpus endometrial carcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4,6-tribromophenol (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

3H-1,2-dithiole-3-thione (EXP)

4,4'-sulfonyldiphenol (ISO)

4-hydroxynon-2-enal (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

amosite asbestos (ISO)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

baricitinib (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

CGP 52608 (ISO)

choline (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

diazinon (EXP)

dimethylarsinic acid (EXP)

disodium selenite (ISO)

doxorubicin (ISO)

enzyme inhibitor (ISO)

ethanol (ISO)

fenthion (ISO)

fluoxetine (EXP)

flutamide (EXP)

folic acid (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

indometacin (ISO)

ivermectin (ISO)

L-ascorbic acid (ISO)

L-methionine (ISO)

maneb (ISO)

methapyrilene (ISO)

methidathion (ISO)

Monobutylphthalate (EXP)

nickel dichloride (EXP)

nitrates (ISO)

ozone (ISO)

paracetamol (ISO)

paraquat (EXP,ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

serpentine asbestos (ISO)

sodium arsenite (ISO)

sodium fluoride (ISO)

tert-butyl hydroperoxide (ISO)

titanium dioxide (ISO)

triphenyl phosphate (ISO)

tungsten (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vitamin E (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cell development (ISO)

clathrin coat assembly (IEA,ISO)

clathrin coat disassembly (IBA,IEA,ISO)

clathrin-dependent endocytosis (IBA,IEA,ISO,ISS)

endoplasmic reticulum organization (ISO)

epidermal cell differentiation (ISO)

establishment of skin barrier (ISO)

forebrain morphogenesis (ISO)

Golgi organization (IEA,ISO)

Golgi to lysosome transport (IEA,ISO)

intrahepatic bile duct development (ISO)

negative regulation of neuron projection development (IEA,ISO)

positive regulation of neural precursor cell proliferation (ISO)

protein localization to Golgi apparatus (IEA,ISO)

protein localization to plasma membrane (IEA,ISO)

receptor-mediated endocytosis (IEA,ISO)

regulation of clathrin coat assembly (IEA,ISO,ISS)

Cellular Component

clathrin-coated vesicle (IEA,ISO,ISS)

cytoplasm (IBA)

cytosol (IEA)

focal adhesion (IEA)

Golgi apparatus (IEA,ISO)

perinuclear region of cytoplasm (IEA)

vesicle (IBA,IEA,ISO)

Molecular Function

ATP binding (IEA)

clathrin binding (IBA)

cyclin binding (IDA)

hydrolase activity (IEA)

kinase activity (IEA)

phosphoprotein phosphatase activity (IEA)

protein kinase activity (IEA)

protein serine kinase activity (IEA)

protein serine/threonine kinase activity (IEA,ISO,ISS)

transferase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	GAK: a cyclin G associated kinase contains a tensin/auxilin-like domain.	Kanaoka Y, etal., FEBS Lett 1997 Jan 27;402(1):73-80.
4.	KEGG: Kyoto Encyclopedia of Genes and Genomes	KEGG
5.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
6.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
7.	GOA pipeline	RGD automated data pipeline
8.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:16155256	PMID:16262722	PMID:18434600	PMID:19946888	PMID:20160091	PMID:24510904	PMID:29476059

Genomics

Comparative Map Data

Gak
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	1,234,272 - 1,308,492 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	14	1,234,266 - 1,323,974 (+)	Ensembl				GRCr8
mRatBN7.2	14	1,089,853 - 1,164,098 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	1,089,866 - 1,216,398 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	14	989,603 - 1,063,129 (+)	NCBI	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	2,291,381 - 2,364,893 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	988,076 - 1,061,600 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd	14	982,267 - 1,055,786 (+)	NCBI
Lyon_Normotensive	14	981,189 - 1,054,708 (+)	NCBI
Lyon_Hypertensive	14	980,140 - 1,053,656 (+)	NCBI
F344_StmMcwi	14	1,261,860 - 1,335,142 (+)	NCBI
Rnor_6.0	14	2,100,104 - 2,174,332 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	2,100,106 - 2,174,318 (+)	Ensembl		Rnor_6.0 Ensembl	rn6	Rnor6.0
Rnor_5.0	14	2,095,637 - 2,168,946 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	14	1,630,890 - 1,710,373 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	14	1,129,213 - 1,203,494 (+)	NCBI		Celera
RGSC_v3.1	14	1,630,889 - 1,710,373 (+)	NCBI
Cytogenetic Map	14	p22	NCBI

GAK
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	849,277 - 932,316 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	849,275 - 932,411 (-)	Ensembl		GRCh38.p14 Ensembl	hg38	GRCh38
GRCh37	4	843,065 - 926,104 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	833,065 - 916,174 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	4	832,895 - 915,805	NCBI
Celera	4	750,124 - 863,080 (-)	NCBI		Celera
Cytogenetic Map	4	p16.3	NCBI
HuRef	4	813,547 - 897,389 (-)	NCBI		HuRef
CHM1_1	4	842,855 - 925,384 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	847,030 - 930,388 (-)	NCBI		T2T-CHM13v2.0

Gak
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	108,716,973 - 108,777,643 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	108,717,277 - 108,777,621 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	5	108,569,107 - 108,629,777 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	108,569,411 - 108,629,755 (-)	Ensembl		GRCm38.p6 Ensembl	mm10	GRCm38
MGSCv37	5	108,998,433 - 109,058,758 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	5	108,809,716 - 108,870,041 (-)	NCBI		MGSCv36	mm8
Celera	5	105,690,922 - 105,751,237 (-)	NCBI		Celera
Cytogenetic Map	5	F	NCBI
cM Map	5	53.2	NCBI

Gak
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955514	387,179 - 434,077 (-)	Ensembl		ChiLan1.0 Ensembl
ChiLan1.0	NW_004955514	391,305 - 434,198 (-)	NCBI	ChiLan1.0	ChiLan1.0

GAK
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	1,164,993 - 1,262,302 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	1,121,494 - 1,228,106 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	952,474 - 1,049,612 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	883,096 - 967,473 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	883,096 - 967,473 (-)	Ensembl		PanPan1.1 Ensembl	panPan2	panpan1.1

GAK
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	91,575,537 - 91,630,715 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	91,574,751 - 91,630,663 (+)	Ensembl		CanFam3.1 Ensembl	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	94,040,859 - 94,095,630 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	92,574,135 - 92,629,637 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	92,573,478 - 92,631,424 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	91,745,453 - 91,800,982 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	91,799,161 - 91,854,620 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	92,183,004 - 92,238,533 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Gak
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mIctTri1.hap1	9	428,478 - 475,175 (-)	NCBI		mIctTri1.hap1
HiC_Itri_2	NW_024405285	68,552,411 - 68,599,133 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936477	22,253,471 - 22,300,932 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936477	22,254,109 - 22,300,827 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GAK
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	240,822 - 296,956 (-)	Ensembl		Sscrofa11.1 Ensembl	susScr11	Sscrofa11.1
Sscrofa11.1	8	240,818 - 296,989 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	322 - 23,682 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GAK
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mChlSab1.0.hap1	27	48,884,203 - 48,972,379 (+)	NCBI		mChlSab1.0.hap1
Vero_WHO_p1.0	NW_023666051	4,214,320 - 4,318,135 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0
ChlSab1.1	27	47,852,548 - 47,935,691 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	47,852,588 - 47,935,874 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM

Gak
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624755	26,208,207 - 26,250,937 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2
HetGla_female_1.0 Ensembl	NW_004624755	26,208,334 - 26,250,533 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl

Gak
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	11	18,350,869 - 18,415,409 (-)	NCBI	Rrattus_CSIRO_v1	Rrattus_CSIRO_v1

Variants

Variants in Gak
380 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	205
Count of miRNA genes:	160
Interacting mature miRNAs:	170
Transcripts:	ENSRNOT00000000064
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7411573	Bw139	Body weight QTL 139	4.7	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	14	1	40068101	Rat
9589814	Gluco67	Glucose level QTL 67	4.54	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	14	1	40068101	Rat
634352	Apr6	Acute phase response QTL 6	3.7		blood interleukin-6 amount (VT:0008595)	plasma interleukin-6 level (CMO:0001927)	14	1	41415516	Rat
71115	Niddm15	Non-insulin dependent diabetes mellitus QTL 15	4.8		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	14	1	11334906	Rat
71117	Niddm17	Non-insulin dependent diabetes mellitus QTL 17	2.35		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	14	1	17877928	Rat
70204	Niddm20	Non-insulin dependent diabetes mellitus QTL 20	5.1	0.000008	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	14	1	31893212	Rat

Markers in Region

RH131491

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Cytogenetic Map	14	p22	UniSTS

GAK__6772

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	9	4,087,257 - 4,087,688 (+)	MAPPER	mRatBN7.2
mRatBN7.2	14	1,163,595 - 1,164,093 (+)	MAPPER	mRatBN7.2
mRatBN7.2	13	2,121,542 - 2,122,041 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	4,656,799 - 4,657,297	NCBI	Rnor6.0
Rnor_6.0	14	2,173,821 - 2,174,318	NCBI	Rnor6.0
Rnor_5.0	14	2,168,440 - 2,168,937	UniSTS	Rnor5.0
Rnor_5.0	13	4,633,864 - 4,634,362	UniSTS	Rnor5.0
Celera	14	1,202,997 - 1,203,494	UniSTS
Celera	13	3,084,268 - 3,084,766	UniSTS
Cytogenetic Map	14	p22	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	entire extraembryonic component	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	pharyngeal arch	renal system	reproductive system	respiratory system	sensory system	visual system
276	156	730	1591	4061	1011	1728	133	874	495	856	156	5397	2597	449	3974	38	1393	740	909	160	158

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_031030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006250584	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017599389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039092485	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063273667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC106245	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC117047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D38560	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000000064 ⟹ ENSRNOP00000000064

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	1,234,276 - 1,308,526 (+)	Ensembl
mRatBN7.2 Ensembl	14	1,089,866 - 1,164,094 (+)	Ensembl
Rnor_6.0 Ensembl	14	2,100,106 - 2,174,318 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000061720 ⟹ ENSRNOP00000058432

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	1,234,272 - 1,323,974 (+)	Ensembl
mRatBN7.2 Ensembl	14	1,089,866 - 1,216,398 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105303 ⟹ ENSRNOP00000081704

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	1,234,266 - 1,308,492 (+)	Ensembl
mRatBN7.2 Ensembl	14	1,089,866 - 1,164,094 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000114393 ⟹ ENSRNOP00000081239

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	1,234,376 - 1,308,526 (+)	Ensembl
mRatBN7.2 Ensembl	14	1,089,971 - 1,164,094 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000134932 ⟹ ENSRNOP00000100598

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	1,234,276 - 1,308,526 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000135400 ⟹ ENSRNOP00000111853

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	14	1,234,276 - 1,308,526 (+)	Ensembl

RefSeq Acc Id:

NM_031030 ⟹ NP_112292

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,234,272 - 1,308,489 (+)	NCBI
mRatBN7.2	14	1,089,867 - 1,164,093 (+)	NCBI
Dahl_SR_JrHsd	14	982,267 - 1,055,786 (+)	NCBI
Lyon_Normotensive	14	981,189 - 1,054,708 (+)	NCBI
Lyon_Hypertensive	14	980,140 - 1,053,656 (+)	NCBI
F344_StmMcwi	14	1,261,860 - 1,335,142 (+)	NCBI
Rnor_6.0	14	2,100,106 - 2,174,318 (+)	NCBI
Rnor_5.0	14	2,095,637 - 2,168,946 (+)	NCBI
RGSC_v3.4	14	1,630,890 - 1,710,373 (+)	RGD
Celera	14	1,129,213 - 1,203,494 (+)	RGD

Sequence:

show sequence

CGTCACGGCGCGGGCGGAAGATGGCCGGGTTGGTTGCCCGCAGCTGCTAACCCGGCAGTGCGGA
GCTGGAGCCTGGCTCCCGCTGCCGCGAAGCGGCCGTCGCCATGTCGCTGCTGCAGTCTGCACTG
GACTTCCTGGCGGGCCCTGGTTCTCTTGGCGGAGCTGCCGGCCGTGACCAGAGTGACTTCGTGG
GGCAGACTGTGGAGCTGGGCGAGCTGCGTCTGCGGGTGCGGCGGGTCCTGGCCGAGGGAGGGTT
TGCATTTGTTTATGAAGCTCAAGATCTGGGAAGTGGCAGAGAGTATGCATTAAAGAGATTACTA
TCCAATGAAGAGGAAAAGAACAGAGCCATCATTCAGGAAGTATGTTTCTTGAAAAAACTTTCTG
GCCACCCCAATATTGTCCAGTTCTGCTCTGCAGCATCCATAGGAAAAGAGGAATCGGACACTGG
GCAGGCTGAGTTCCTCCTGCTTACGGAGCTCTGTAAAGGACAGCTGGTGGAGTTTCTCAGGAGA
GTTGAATGTAAAGGCCCTCTATCCTGCGACAGCATTCTGAAGATCTTCTACCAGACATGCAGAG
CAGTGCAGCACATGCACAGGCAGAAACCACCCATCATCCACAGGGATCTCAAGGTTGAAAACTT
ACTGCTTAGTAACCAGGGGACCATTAAGCTGTGTGACTTTGGCAGTGCCACAACCATCTCCCAT
TATCCTGACTACAGCTGGAGCGCCCAGAAGCGAGCAATGGTGGAGGAAGAGATCACGAGGAACA
CCACACCCATGTACAGAACGCCAGAAATTGTAGACCTGTATTCTAACTTCCCTATTGGCGAAAA
GCAGGATATCTGGGCACTGGGCTGTATCTTATACCTGCTGTGTTTCCGGCAGCATCCTTTTGAA
GATGGAGCAAAACTTCGGATAGTCAATGGGAAGTATTCCATTCCTGTGAATGACACTCGTTACA
CAGTCTTCCATGACCTTATTCGTGGCATGCTAAAGGTCAATCCAGAAGAGAGGCTATCCATTGC
TGAAGTTGTCCGACAACTGCAGGAAATTGCAGCAGCCCGGAATGTGAACCCCAAAGCCCCCATC
ACAGAACTTCTGGAGCAGAATGGTGGCTATGGGAACTCAGGGCCTTCCCGAGCACAACCACCTT
CTGGGGGCCCTGTGAACAGCAGTGGAGTTTTGGCTCTGGCAGAGTATGACCAGCCCTATGGTGG
GTTTCTCGATATCCTACGGGGTGGGACAGAACGGCTCTTCACCAACCTCAAGGATACTTCCTCC
AAGGTCATCCAGTCTGTGGCTAACTATGCAAAGGGCGATCTTGACATATCTTACATCACATCCA
GGATTGCAGTGATGTCGTTCCCAGCAGAAGGTGTGGAGTCAGCAATCAAAAACAATATAGAGGA
TGTACGATTGTTTCTGGATGCCAAGCATCCAGGACATTATGCTGTCTACAACCTTTCTCCAAGA
ATATACCGGGCTTCCAAGTTCCACAATCGGGTCACTGAGTGTGGCTGGGCAGTCAGGCGGGCAC
CACATCTCCACAGTTTGTATACTCTATGCAGGAGCATGCATGCCTGGCTCCGGGAAGACCACAG
GAACGTCTGTGTTGTACATTGCATGGATGGGAGAGCTGCGTCTGCTGTGGCAGTCTGTGCATTC
CTGTGCTTCTGCCGTCTCTTCAGCACTGCAGAGGCTGCTGTGTACATGTTCAGCATGAAGCGCT
GCCCACCAGGCATTTGGCCATCCCACAAAAGGTACATTGAATACGTGTGTGACATGGTGGCAGA
GGAACCCATCACGCCCCACAGCAAGCCAATGCTGGTGAAATCTGTTGTCATGACCCCTGTGCCA
CTGTTCAGCAAGCAGAGGAATGGCTGCCGACCATTCTGTGAGGTCTATGTTGGGGAGGAGCGTG
TAACCACCACATCCCAGGAGTATGACAGGATGAAGGAATTTAAAATTGAGGATGGCAAGGCTGT
CATCCCCCTGGGCATAACAGTTCAAGGCGATGTCCTCACCATCATTTACCATGCCAGATCCACT
TTAGGAGGGAGACTGCAGGCCAAGATGGCGTCCATGAAAATGTTCCAGATTCAGTTCCACACTG
GGTTCGTGCCTCGAAACGCAACCACTGTGAAATTTGCAAAGTATGACCTGGATGCTTGTGACAT
TCAAGAGAAGTACCCAGATCTGTTCCAGGTGAACCTGGAAGTGGAGGTGGAGCCTAGAGACAGG
CCCAGCCGAGACGTTCCACCTTGGGAGAATACCAGCCTAAGGGGGTTAAACCCCAAGATCCTCT
TTTCCAACAGGGAAGAGCAACAGGACATTCTGTCTAAGTTTGGGAAACCAGAGCTACCCCGGCA
GCCGGGCTCCACAGCTCAGTATGATGCTGAGGCAGGGTCTCCAGAGGCTGAGATCACAGAGTCG
GACTCACCACAGAGCAGCAGCACGGACACCAACCACTTTCTTCACACACTGGATTGGCAGGAGG
AAAAAGACCCAGAGACTGGTGTAGACAATACCTCTCCTAAGGAGAGTCAGTCTAACCTGATTGC
AGATGGAGATGGAAGTGAAGTATCAGATGAAGAAGAGGCTTCATGCCCTAGTGAAGAGAGAAAG
CCTGGGGCTGGAGAAGATACACCAAGGCTGGCAGCTGGGACCAGACAGCAAGACTTAATATTTG
ATGTGGGCATGCTGGCTGCCCCACAGGAGCCTGTACAGCCTGAAGAAGGTGTCGATCTCCTGGG
GCTGCACTCTGAAGGGGACTTAAGGCCTGCTGCTCCCTTGCAGGCTAGCGGGGTCCAGTCTAGC
AACACTGACCTGTTGAGCTCCCTTCTTGAACCATCTGATGCTTCTCAAGTGGGACCTCCTGGTG
ACCTGCTTGGTGGTGAGACTCCTCTGCTGTTAGCAAGCCCAGTTTCTCTTCTTGGGGTGCAGAG
CAACCTGCAAGGAAAAGTCCCTGACACTGTGGACCCATTTGACCAGTTCCTGCTGCCATCCAGC
TCGGACACCCAGCCCTGCTCCAAGCCTGATCTCTTTGGAGAGTTTCTCAACTCTGACTCTGTAG
CTTCCTCAACTGCCTTCCCATCGACCCACAGCGCCCCACCCCCATCCTGCAGCACTGCCTTCCT
GCACCTGGGAGATCTGCCAGCAGAGCCCAACAAGGTGATTGCTTCATCCAGCCACCCAGATCTG
CTAGGAGGATGGGATACGTGGGCTGAGACTGCTCTACCTGGGCCGGCCTCCATGCCAGTACCAG
AAGGTACTCTCTTCTCTTCTGCAGGTCACCCAGCCCCTCCAGGCCCCAACCCCAGCCAAACCAA
GTCTCAGAACCCAGACCCATTTGCTGACCTCAGTGATCTCAGCTCTAGCCTCCAAGGCTTGCCT
GCTGGACTTCCTGCAGGGAGCTTCGTTGGCACATCAGCCACCACTCACAAAAGCAACAGCTCCT
GGCAGACAACTCGTCCCACAGCCCCTGGAACCTCATGGCCCCCGCAGGCCAAGCCAGCCCCCAG
AGCCTCTGAACAACTAAGGTCTCACTTTAGTGTGATTGGGGCCCGAGAAGAGAGAGGTGTCCGT
GCGCCCAGCTTTGCCCAAAAGCCAAAGGTCTCAGAAAATGATTTTGAAGATCTGCTGCCTAATC
AAGGCTTCTCTAAGTCTGACAAGAAGGGGCCAAAGACCATGGCAGAGATGCGGAAACAGGAACT
TGCCAGAGATACAGACCCATTCAAATTGAAGCTTTTGGACTGGATTGAAGGCAAAGAGAGGAAT
ATTCGTGCACTGCTGTCCACTCTGCACACAGTATTGTGGGATGGGGAGAGCCGCTGGACACCTG
TGAGTATGGCTGACCTGGTGACTCCAGAGCAGGTGAAGAAGCAGTACCGCCGTGCAGTGCTGGT
AGTGCATCCTGATAAGGCCACAGGGCAGCCATATGAACAGTCTGCCAAGATGATCTTCATGGAG
CTGAATGATGCATGGTCTGAGTTTGAAAACCAGGGCTCAAGGCCCCTCTTCTGAGGCCTGTGAT
GACTATGGCTGCAGGAGCTGCTCATGAATCCTGAATGCTGCTGGCCTGACTGAGGCACAAATGG
GACCATAACAGGTGTGGCAGGTGATATCGCCCCAGGGGCCTGGACCATCTACTCCCAATCATCC
CTGCATTCATCATGGACAAATACCATTCCATGGCTGGGAGAGAAAGCATTCCTCAGATCTGATA
TTTGTTGTTTTGTTTTTCTTTTTCTTGTCCCAGAGGAAAAGTGTTGATTTATATTCCTTCCACA
GCTGTCACAATTTGTGATTTACTTGGTGTCTGGTGGCTGTCACCTCTTGAATGGCACATGTCGC
TGGCACTTCTCTCCTGTAATTTCTTCAAATATGGGGTGCATCCACACCCCACTCTGATAAGTTT
GCCAATCATCTGTACATAATTAAACTATTTTCCGATG

hide sequence

RefSeq Acc Id:

XM_006250583 ⟹ XP_006250645

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,234,376 - 1,308,492 (+)	NCBI
mRatBN7.2	14	1,089,854 - 1,164,098 (+)	NCBI
Rnor_6.0	14	2,100,104 - 2,174,327 (+)	NCBI
Rnor_5.0	14	2,095,637 - 2,168,946 (+)	NCBI

Sequence:

show sequence

TACGTCACGGCGCGGGCGGAAGATGGCCGGGTTGGTTGCCCGCAGCTGCTAACCCGGCAGTGCG
GAGCTGGAGCCTGGCTCCCGCTGCCGCGAAGCGGCCGTCGCCATGTCGCTGCTGCAGTCTGCAC
TGGACTTCCTGGCGGGCCCTGGTTCTCTTGGCGGAGCTGCCGGCCGTGACCAGAGTGACTTCGT
GGGGCAGACTGTGGAGCTGGGCGAGCTGCGTCTGCGGGTGCGGCGGGTCCTGGCCGAGGGAGGG
TTTGCATTTGTTTATGAAGCTCAAGATCTGGGAAGTGGCAGAGAGTATGCATTAAAGAGATTAC
TATCCAATGAAGAGGAAAAGAACAGAGCCATCATTCAGGAAGTATGTTTCTTGAAAAAACTTTC
TGGCCACCCCAATATTGTCCAGTTCTGCTCTGCAGCATCCATAGGAAAAGAGGAATCGGACACT
GGGCAGGCTGAGTTCCTCCTGCTTACGGAGCTCTGTAAAGGACAGCTGGTGGAGTTTCTCAGGA
GAGTTGAATGTAAAGGCCCTCTATCCTGCGACAGCATTCTGAAGATCTTCTACCAGACATGCAG
AGCAGTGCAGCACATGCACAGGCAGAAACCACCCATCATCCACAGGGATCTCAAGGTTGAAAAC
TTACTGCTTAGTAACCAGGGGACCATTAAGCTGTGTGACTTTGGCAGTGCCACAACCATCTCCC
ATTATCCTGACTACAGCTGGAGCGCCCAGAAGCGAGCAATGGTGGAGGAAGAGATCACGAGGAA
CACCACACCCATGTACAGAACGCCAGAAATTGTAGACCTGTATTCTAACTTCCCTATTGGCGAA
AAGCAGGATATCTGGGCACTGGGCTGTATCTTATACCTGCTGTGTTTCCGGCAGCATCCTTTTG
AAGATGGAGCAAAACTTCGGATAGTCAATGGGAAGTATTCCATTCCTGTGAATGACACTCGTTA
CACAGTCTTCCATGACCTTATTCGTGGCATGCTAAAGGTCAATCCAGAAGAGAGGCTATCCATT
GCTGAAGTGGTCCGACAACTGCAGGAAATTGCAGCAGCCCGGAATGTGAACCCCAAAGCCCCCA
TCACAGAGCTTCTGGAGCAGAATGGTGGCTATGGGAACTCAGGGCCTTCCCGAGCACAACCACC
TTCTGGGGGCCCTGTGAACAGCAGTGGAGTTTTGGCTCTGGCAGAGTATGACCAGCCCTATGGT
GGGTTTCTCGATATCCTACGGGGTGGGACAGAACGGCTCTTCACCAACCTCAAGGATACTTCCT
CCAAGGTCATCCAGTCTGTGGCTAACTATGCAAAGGGCGATCTTGACATATCTTACATCACATC
CAGGATTGCAGTGATGTCGTTCCCAGCAGAAGGTGTGGAGTCAGCAATCAAAAACAATATAGAG
GATGTACGATTGTTTCTGGATGCCAAGCATCCAGGACATTATGCTGTCTACAACCTTTCTCCAA
GAATATACCGGGCTTCCAAGTTCCACAATCGGGTCACTGAGTGTGGCTGGGCAGTCAGGCGGGC
ACCACATCTCCACAGTTTGTATACTCTATGCAGGAGCATGCATGCCTGGCTCCGGGAAGACCAC
AGGAACGTCTGTGTTGTACATTGCATGGATGGGAGAGCTGCGTCTGCTGTGGCAGTCTGTGCAT
TCCTGTGCTTCTGCCGTCTCTTCAGCACTGCAGAGGCTGCTGTGTACATGTTCAGCATGAAGCG
CTGCCCACCAGGCATTTGGCCATCCCACAAAAGGTACATTGAATACGTGTGTGACATGGTGGCA
GAGGAACCCATCACGCCCCACAGCAAGCCAATGCTGGTGAAATCTGTTGTCATGACCCCTGTGC
CACTGTTCAGCAAGCAGAGGAATGGCTGCCGACCATTCTGTGAGGTCTATGTTGGGGAGGAGCG
TGTAACCACCACATCCCAGGAGTATGACAGGATGAAGGAATTTAAAATTGAGGATGGCAAGGCT
GTCATCCCCCTGGGCATAACAGTTCAAGGCGATGTCCTCATCATCATTTACCATGCCAGATCCA
CTTTAGGAGGGAGACTGCAGGCCAAGATGGCGTCCATGAAAATGTTCCAGATTCAGTTCCACAC
TGGGTTCGTGCCTCGAAACGCAACCACTGTGAAATTTGCAAAGTATGACCTGGATGCTTGTGAC
ATTCAAGAGAAGTACCCAGATCTGTTCCAGGTGAACCTGGAAGTGGAGGTGGAGCCTAGAGACA
GGCCCAGCCGAGACGTTCCACCTTGGGAGAATACCAGCCTAAGGGGGTTAAACCCCAAGATCCT
CTTTTCCAACAGGGAAGAGCAACAGGACATTCTGTCTAAGTTTGGGAAACCAGAGCTACCCCGG
CAGCCGGGCTCCACAGCTCAGTATGATGCTGAGGCAGGGTCTCCAGAGGCTGAGATCACAGAGT
CGGACTCACCACAGAGCAGCAGCACGGACACCAACCACTTTCTTCACACACTGGATTGGCAGGA
GGAAAAAGACCCAGAGACTGGTGTAGACAATACCTCTCCTAAGGAGAGTCAGTCTAACCTGATT
GCAGATGGAGATGGAAGTGAAGTATCAGATGAAGAAGAGGCTTCATGCCCTAGTGAAGAGAGAA
AGCCTGGGGCTGGAGAAGATACACCAAGGCTGGCAGCTGGGACCAGACAGCAAGACTTAATATT
TGATGTGGGCATGCTGGCTGCCCCACAGGAGCCTGTACAGCCTGAAGAAGGTGTCGATCTCCTG
GGGCTGCACTCTGAAGGGGACTTAAGGCCTGCTGCTCCCTTGCAGGCTAGCGGGGTCCAGTCTA
GCAACACTGACCTGTTGAGCTCCCTTCTTGAACCATCTGATGCTTCTCAAGTGGGACCTCCTGG
TGACCTGCTTGGTGTGGACCCATTTGACCAGTTCCTGCTGCCATCCAGCTCGGACACCCAGCCC
TGCTCCAAGCCTGATCTCTTTGGAGAGTTTCTCAACTCTGACTCTGTAGCTTCCTCAACTGCCT
TCCCATCGACCCACAGCGCCCCACCCCCATCCTGCAGCACTGCCTTCCTGCACCTGGGAGATCT
GCCAGCAGAGCCCAACAAGGTGATTGCTTCATCCAGCCACCCAGATCTGCTAGGAGGATGGGAT
ACGTGGGCTGAGACTGCTCTACCTGGGCCGGCCTCCATGCCAGTACCAGAAGGTACTCTCTTCT
CTTCTGCAGGTCACCCAGCCCCTCCAGGCCCCAACCCCAGCCAAACCAAGTCTCAGAACCCAGA
CCCATTTGCTGACCTCAGTGATCTCAGCTCTAGCCTCCAAGGCTTGCCTGCTGGACTTCCTGCA
GGGAGCTTCGTTGGCACATCAGCCACCACTCACAAAAGCAACAGCTCCTGGCAGACAACTCGTC
CCACAGCCCCTGGAACCTCATGGCCCCCGCAGGCCAAGCCAGCCCCCAGAGCCTCTGAACAACT
AAGGTCTCACTTTAGTGTGATTGGGGCCCGAGAAGAGAGAGGTGTCCGTGCGCCCAGCTTTGCC
CAAAAGCCAAAGGTCTCAGAAAATGATTTTGAAGATCTGCTGCCTAATCAAGGCTTCTCTAAGT
CTGACAAGAAGGGGCCAAAGACCATGGCAGAGATGCGGAAACAGGAACTTGCCAGAGATACAGA
CCCATTCAAATTGAAGCTTTTGGACTGGATTGAAGGCAAAGAGAGGAATATTCGTGCACTGCTG
TCCACTCTGCACACAGTATTGTGGGATGGGGAGAGCCGCTGGACACCTGTGAGTATGGCTGACC
TGGTGACTCCAGAGCAGGTGAAGAAGCAGTACCGCCGTGCAGTGCTGGTAGTGCATCCTGATAA
GGCCACAGGGCAGCCATATGAACAGTCTGCCAAGATGATCTTCATGGAGCTGAATGATGCATGG
TCTGAGTTTGAAAACCAGGGCTCAAGGCCCCTCTTCTGAGGCCTGTGATGACTATGGCTGCAGG
AGCTGCTCATGAATCCTGAATGCTGCTGGCCTGACTGAGGCACAAATGGGACCATAACAGGTGT
GGCAGGTGATATCGCCCCAGGGGCCTGGACCATCTACTCCCAATCATCCCTGCATTCATCATGG
ACAAATACCATTCCATGGCTGGGAGAGAAAGCATTCCTCAGATCTGATATTTGTTGTTTTGTTT
TTCTTTTTCTTGTCCCAGAGGAAAAGTGTTGATTTATATTCCTTCCACAGCTGTCACAATTTGT
GATTTACTTGGTGTCTGGTGGCTGTCACCTCTTGAATGGCACATGTCGCTGGCACTTCTCTCCT
GTAATTTCTTCAAATATGGGGTGCATCCACACCCCACTCTGATAAGTTTGCCAATCATCTGTAC
ATAATTAAACTATTTTCCGATGGCTGGTGCA

hide sequence

RefSeq Acc Id:

XM_006250584 ⟹ XP_006250646

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,234,376 - 1,308,492 (+)	NCBI
mRatBN7.2	14	1,089,854 - 1,164,098 (+)	NCBI
Rnor_6.0	14	2,100,104 - 2,174,327 (+)	NCBI
Rnor_5.0	14	2,095,637 - 2,168,946 (+)	NCBI

Sequence:

show sequence

TACGTCACGGCGCGGGCGGAAGATGGCCGGGTTGGTTGCCCGCAGCTGCTAACCCGGCAGTGCG
GAGCTGGAGCCTGGCTCCCGCTGCCGCGAAGCGGCCGTCGCCATGTCGCTGCTGCAGTCTGCAC
TGGACTTCCTGGCGGGCCCTGGTTCTCTTGGCGGAGCTGCCGGCCGTGACCAGAGTGACTTCGT
GGGGCAGACTGTGGAGCTGGGCGAGCTGCGTCTGCGGGTGCGGCGGGTCCTGGCCGAGGGAGGG
TTTGCATTTGTTTATGAAGCTCAAGATCTGGGAAGTGGCAGAGAGTATGCATTAAAGAGATTAC
TATCCAATGAAGAGGAAAAGAACAGAGCCATCATTCAGGAAGTATGTTTCTTGAAAAAACTTTC
TGGCCACCCCAATATTGTCCAGTTCTGCTCTGCAGCATCCATAGGAAAAGAGGAATCGGACACT
GGGCAGGCTGAGTTCCTCCTGCTTACGGAGCTCTGTAAAGGACAGCTGGTGGAGTTTCTCAGGA
GAGTTGAATGTAAAGGCCCTCTATCCTGCGACAGCATTCTGAAGATCTTCTACCAGACATGCAG
AGCAGTGCAGCACATGCACAGGCAGAAACCACCCATCATCCACAGGGATCTCAAGGTTGAAAAC
TTACTGCTTAGTAACCAGGGGACCATTAAGCTGTGTGACTTTGGCAGTGCCACAACCATCTCCC
ATTATCCTGACTACAGCTGGAGCGCCCAGAAGCGAGCAATGGTGGAGGAAGAGATCACGAGGAA
CACCACACCCATGTACAGAACGCCAGAAATTGTAGACCTGTATTCTAACTTCCCTATTGGCGAA
AAGCAGGATATCTGGGCACTGGGCTGTATCTTATACCTGCTGTGTTTCCGGCAGCATCCTTTTG
AAGATGGAGCAAAACTTCGGATAGTCAATGGGAAGTATTCCATTCCTGTGAATGACACTCGTTA
CACAGTCTTCCATGACCTTATTCGTGGCATGCTAAAGGTCAATCCAGAAGAGAGGCTATCCATT
GCTGAAGTGGTCCGACAACTGCAGGAAATTGCAGCAGCCCGGAATGTGAACCCCAAAGCCCCCA
TCACAGAGCTTCTGGAGCAGAATGGTGGCTATGGGAACTCAGGGCCTTCCCGAGCACAACCACC
TTCTGGGGGCCCTGTGAACAGCAGTGGAGTTTTGGCTCTGGCAGAGTATGACCAGCCCTATGGT
GGGTTTCTCGATATCCTACGGGGTGGGACAGAACGGCTCTTCACCAACCTCAAGGATACTTCCT
CCAAGGTCATCCAGTCTGTGGCTAACTATGCAAAGGGCGATCTTGACATATCTTACATCACATC
CAGGATTGCAGTGATGTCGTTCCCAGCAGAAGGTGTGGAGTCAGCAATCAAAAACAATATAGAG
GATGTACGATTGTTTCTGGATGCCAAGCATCCAGGACATTATGCTGTCTACAACCTTTCTCCAA
GAATATACCGGGCTTCCAAGTTCCACAATCGGGTCACTGAGTGTGGCTGGGCAGTCAGGCGGGC
ACCACATCTCCACAGTTTGTATACTCTATGCAGGAGCATGCATGCCTGGCTCCGGGAAGACCAC
AGGAACGTCTGTGTTGTACATTGCATGGATGGGAGAGCTGCGTCTGCTGTGGCAGTCTGTGCAT
TCCTGTGCTTCTGCCGTCTCTTCAGCACTGCAGAGGCTGCTGTGTACATGTTCAGCATGAAGCG
CTGCCCACCAGGCATTTGGCCATCCCACAAAAGGTACATTGAATACGTGTGTGACATGGTGGCA
GAGGAACCCATCACGCCCCACAGCAAGCCAATGCTGGTGAAATCTGTTGTCATGACCCCTGTGC
CACTGTTCAGCAAGCAGAGGAATGGCTGCCGACCATTCTGTGAGGTCTATGTTGGGGAGGAGCG
TGTAACCACCACATCCCAGGAGTATGACAGGATGAAGGAATTTAAAATTGAGGATGGCAAGGCT
GTCATCCCCCTGGGCATAACAGTTCAAGGCGATGTCCTCATCATCATTTACCATGCCAGATCCA
CTTTAGGAGGGAGACTGCAGGCCAAGATGGCGTCCATGAAAATGTTCCAGATTCAGTTCCACAC
TGGGTTCGTGCCTCGAAACGCAACCACTGTGAAATTTGCAAAGTATGACCTGGATGCTTGTGAC
ATTCAAGAGAAGTACCCAGATCTGTTCCAGGTGAACCTGGAAGTGGAGGTGGAGCCTAGAGACA
GGCCCAGCCGAGACGTTCCACCTTGGGAGAATACCAGCCTAAGGGGGTTAAACCCCAAGATCCT
CTTTTCCAACAGGGAAGAGCAACAGGACATTCTGTCTAAGTTTGAGGAAAAAGACCCAGAGACT
GGTGTAGACAATACCTCTCCTAAGGAGAGTCAGTCTAACCTGATTGCAGATGGAGATGGAAGTG
AAGTATCAGATGAAGAAGAGGCTTCATGCCCTAGTGAAGAGAGAAAGCCTGGGGCTGGAGAAGA
TACACCAAGGCTGGCAGCTGGGACCAGACAGCAAGACTTAATATTTGATGTGGGCATGCTGGCT
GCCCCACAGGAGCCTGTACAGCCTGAAGAAGGTGTCGATCTCCTGGGGCTGCACTCTGAAGGGG
ACTTAAGGCCTGCTGCTCCCTTGCAGGCTAGCGGGGTCCAGTCTAGCAACACTGACCTGTTGAG
CTCCCTTCTTGAACCATCTGATGCTTCTCAAGTGGGACCTCCTGGTGACCTGCTTGGTGGTGAG
ACTCCTCTGCTGTTAGCAAGCCCAGTTTCTCTTCTTGGGGTGCAGAGCAACCTGCAAGGAAAAG
TCCCTGACACTGTGGACCCATTTGACCAGTTCCTGCTGCCATCCAGCTCGGACACCCAGCCCTG
CTCCAAGCCTGATCTCTTTGGAGAGTTTCTCAACTCTGACTCTGTAGCTTCCTCAACTGCCTTC
CCATCGACCCACAGCGCCCCACCCCCATCCTGCAGCACTGCCTTCCTGCACCTGGGAGATCTGC
CAGCAGAGCCCAACAAGGTGATTGCTTCATCCAGCCACCCAGATCTGCTAGGAGGATGGGATAC
GTGGGCTGAGACTGCTCTACCTGGGCCGGCCTCCATGCCAGTACCAGAAGGTACTCTCTTCTCT
TCTGCAGGTCACCCAGCCCCTCCAGGCCCCAACCCCAGCCAAACCAAGTCTCAGAACCCAGACC
CATTTGCTGACCTCAGTGATCTCAGCTCTAGCCTCCAAGGCTTGCCTGCTGGACTTCCTGCAGG
GAGCTTCGTTGGCACATCAGCCACCACTCACAAAAGCAACAGCTCCTGGCAGACAACTCGTCCC
ACAGCCCCTGGAACCTCATGGCCCCCGCAGGCCAAGCCAGCCCCCAGAGCCTCTGAACAACTAA
GGTCTCACTTTAGTGTGATTGGGGCCCGAGAAGAGAGAGGTGTCCGTGCGCCCAGCTTTGCCCA
AAAGCCAAAGGTCTCAGAAAATGATTTTGAAGATCTGCTGCCTAATCAAGGCTTCTCTAAGTCT
GACAAGAAGGGGCCAAAGACCATGGCAGAGATGCGGAAACAGGAACTTGCCAGAGATACAGACC
CATTCAAATTGAAGCTTTTGGACTGGATTGAAGGCAAAGAGAGGAATATTCGTGCACTGCTGTC
CACTCTGCACACAGTATTGTGGGATGGGGAGAGCCGCTGGACACCTGTGAGTATGGCTGACCTG
GTGACTCCAGAGCAGGTGAAGAAGCAGTACCGCCGTGCAGTGCTGGTAGTGCATCCTGATAAGG
CCACAGGGCAGCCATATGAACAGTCTGCCAAGATGATCTTCATGGAGCTGAATGATGCATGGTC
TGAGTTTGAAAACCAGGGCTCAAGGCCCCTCTTCTGAGGCCTGTGATGACTATGGCTGCAGGAG
CTGCTCATGAATCCTGAATGCTGCTGGCCTGACTGAGGCACAAATGGGACCATAACAGGTGTGG
CAGGTGATATCGCCCCAGGGGCCTGGACCATCTACTCCCAATCATCCCTGCATTCATCATGGAC
AAATACCATTCCATGGCTGGGAGAGAAAGCATTCCTCAGATCTGATATTTGTTGTTTTGTTTTT
CTTTTTCTTGTCCCAGAGGAAAAGTGTTGATTTATATTCCTTCCACAGCTGTCACAATTTGTGA
TTTACTTGGTGTCTGGTGGCTGTCACCTCTTGAATGGCACATGTCGCTGGCACTTCTCTCCTGT
AATTTCTTCAAATATGGGGTGCATCCACACCCCACTCTGATAAGTTTGCCAATCATCTGTACAT
AATTAAACTATTTTCCGATGGCTGGTGCA

hide sequence

RefSeq Acc Id:

XM_017599389 ⟹ XP_017454878

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,241,700 - 1,308,492 (+)	NCBI
mRatBN7.2	14	1,097,285 - 1,164,098 (+)	NCBI
Rnor_6.0	14	2,107,561 - 2,174,332 (+)	NCBI

Sequence:

show sequence

GTCCAGTTCTGCTCTGCAGCATCCATAGGAAAAGAGGAATCGGACACTGGGCAGGCTGAGTTCC
TCCTGCTTACGGAGCTCTGTAAAGCTGGTGGAGTTTCTCAGGAGAGTTGAATGTAAAGGCCCTC
TATCCTGCGACAGCATTCTGAAGATCTTCTACCAGACATGCAGAGCAGTGCAGCACATGCACAG
GCAGAAACCACCCATCATCCACAGGGATCTCAAGGTTGAAAACTTACTGCTTAGTAACCAGGGG
ACCATTAAGCTGTGTGACTTTGGCAGTGCCACAACCATCTCCCATTATCCTGACTACAGCTGGA
GCGCCCAGAAGCGAGCAATGGTGGAGGAAGAGATCACGAGGAACACCACACCCATGTACAGAAC
GCCAGAAATTGTAGACCTGTATTCTAACTTCCCTATTGGCGAAAAGCAGGATATCTGGGCACTG
GGCTGTATCTTATACCTGCTGTGTTTCCGGCAGCATCCTTTTGAAGATGGAGCAAAACTTCGGA
TAGTCAATGGGAAGTATTCCATTCCTGTGAATGACACTCGTTACACAGTCTTCCATGACCTTAT
TCGTGGCATGCTAAAGGTCAATCCAGAAGAGAGGCTATCCATTGCTGAAGTGGTCCGACAACTG
CAGGAAATTGCAGCAGCCCGGAATGTGAACCCCAAAGCCCCCATCACAGAGCTTCTGGAGCAGA
ATGGTGGCTATGGGAACTCAGGGCCTTCCCGAGCACAACCACCTTCTGGGGGCCCTGTGAACAG
CAGTGGAGTTTTGGCTCTGGCAGAGTATGACCAGCCCTATGGTGGGTTTCTCGATATCCTACGG
GGTGGGACAGAACGGCTCTTCACCAACCTCAAGGATACTTCCTCCAAGGTCATCCAGTCTGTGG
CTAACTATGCAAAGGGCGATCTTGACATATCTTACATCACATCCAGGATTGCAGTGATGTCGTT
CCCAGCAGAAGGTGTGGAGTCAGCAATCAAAAACAATATAGAGGATGTACGATTGTTTCTGGAT
GCCAAGCATCCAGGACATTATGCTGTCTACAACCTTTCTCCAAGAATATACCGGGCTTCCAAGT
TCCACAATCGGGTCACTGAGTGTGGCTGGGCAGTCAGGCGGGCACCACATCTCCACAGTTTGTA
TACTCTATGCAGGAGCATGCATGCCTGGCTCCGGGAAGACCACAGGAACGTCTGTGTTGTACAT
TGCATGGATGGGAGAGCTGCGTCTGCTGTGGCAGTCTGTGCATTCCTGTGCTTCTGCCGTCTCT
TCAGCACTGCAGAGGCTGCTGTGTACATGTTCAGCATGAAGCGCTGCCCACCAGGCATTTGGCC
ATCCCACAAAAGGTACATTGAATACGTGTGTGACATGGTGGCAGAGGAACCCATCACGCCCCAC
AGCAAGCCAATGCTGGTGAAATCTGTTGTCATGACCCCTGTGCCACTGTTCAGCAAGCAGAGGA
ATGGCTGCCGACCATTCTGTGAGGTCTATGTTGGGGAGGAGCGTGTAACCACCACATCCCAGGA
GTATGACAGGATGAAGGAATTTAAAATTGAGGATGGCAAGGCTGTCATCCCCCTGGGCATAACA
GTTCAAGGCGATGTCCTCATCATCATTTACCATGCCAGATCCACTTTAGGAGGGAGACTGCAGG
CCAAGATGGCGTCCATGAAAATGTTCCAGATTCAGTTCCACACTGGGTTCGTGCCTCGAAACGC
AACCACTGTGAAATTTGCAAAGTATGACCTGGATGCTTGTGACATTCAAGAGAAGTACCCAGAT
CTGTTCCAGGTGAACCTGGAAGTGGAGGTGGAGCCTAGAGACAGGCCCAGCCGAGACGTTCCAC
CTTGGGAGAATACCAGCCTAAGGGGGTTAAACCCCAAGATCCTCTTTTCCAACAGGGAAGAGCA
ACAGGACATTCTGTCTAAGTTTGGGAAACCAGAGCTACCCCGGCAGCCGGGCTCCACAGCTCAG
TATGATGCTGAGGCAGGGTCTCCAGAGGCTGAGATCACAGAGTCGGACTCACCACAGAGCAGCA
GCACGGACACCAACCACTTTCTTCACACACTGGATTGGCAGGAGGAAAAAGACCCAGAGACTGG
TGTAGACAATACCTCTCCTAAGGAGAGTCAGTCTAACCTGATTGCAGATGGAGATGGAAGTGAA
GTATCAGATGAAGAAGAGGCTTCATGCCCTAGTGAAGAGAGAAAGCCTGGGGCTGGAGAAGATA
CACCAAGGCTGGCAGCTGGGACCAGACAGCAAGACTTAATATTTGATGTGGGCATGCTGGCTGC
CCCACAGGAGCCTGTACAGCCTGAAGAAGGTGTCGATCTCCTGGGGCTGCACTCTGAAGGGGAC
TTAAGGCCTGCTGCTCCCTTGCAGGCTAGCGGGGTCCAGTCTAGCAACACTGACCTGTTGAGCT
CCCTTCTTGAACCATCTGATGCTTCTCAAGTGGGACCTCCTGGTGACCTGCTTGGTGGTGAGAC
TCCTCTGCTGTTAGCAAGCCCAGTTTCTCTTCTTGGGGTGCAGAGCAACCTGCAAGGAAAAGTC
CCTGACACTGTGGACCCATTTGACCAGTTCCTGCTGCCATCCAGCTCGGACACCCAGCCCTGCT
CCAAGCCTGATCTCTTTGGAGAGTTTCTCAACTCTGACTCTGTAGCTTCCTCAACTGCCTTCCC
ATCGACCCACAGCGCCCCACCCCCATCCTGCAGCACTGCCTTCCTGCACCTGGGAGATCTGCCA
GCAGAGCCCAACAAGGTGATTGCTTCATCCAGCCACCCAGATCTGCTAGGAGGATGGGATACGT
GGGCTGAGACTGCTCTACCTGGGCCGGCCTCCATGCCAGTACCAGAAGGTACTCTCTTCTCTTC
TGCAGGTCACCCAGCCCCTCCAGGCCCCAACCCCAGCCAAACCAAGTCTCAGAACCCAGACCCA
TTTGCTGACCTCAGTGATCTCAGCTCTAGCCTCCAAGGCTTGCCTGCTGGACTTCCTGCAGGGA
GCTTCGTTGGCACATCAGCCACCACTCACAAAAGCAACAGCTCCTGGCAGACAACTCGTCCCAC
AGCCCCTGGAACCTCATGGCCCCCGCAGGCCAAGCCAGCCCCCAGAGCCTCTGAACAACTAAGG
TCTCACTTTAGTGTGATTGGGGCCCGAGAAGAGAGAGGTGTCCGTGCGCCCAGCTTTGCCCAAA
AGCCAAAGGTCTCAGAAAATGATTTTGAAGATCTGCTGCCTAATCAAGGCTTCTCTAAGTCTGA
CAAGAAGGGGCCAAAGACCATGGCAGAGATGCGGAAACAGGAACTTGCCAGAGATACAGACCCA
TTCAAATTGAAGCTTTTGGACTGGATTGAAGGCAAAGAGAGGAATATTCGTGCACTGCTGTCCA
CTCTGCACACAGTATTGTGGGATGGGGAGAGCCGCTGGACACCTGTGAGTATGGCTGACCTGGT
GACTCCAGAGCAGGTGAAGAAGCAGTACCGCCGTGCAGTGCTGGTAGTGCATCCTGATAAGGCC
ACAGGGCAGCCATATGAACAGTCTGCCAAGATGATCTTCATGGAGCTGAATGATGCATGGTCTG
AGTTTGAAAACCAGGGCTCAAGGCCCCTCTTCTGAGGCCTGTGATGACTATGGCTGCAGGAGCT
GCTCATGAATCCTGAATGCTGCTGGCCTGACTGAGGCACAAATGGGACCATAACAGGTGTGGCA
GGTGATATCGCCCCAGGGGCCTGGACCATCTACTCCCAATCATCCCTGCATTCATCATGGACAA
ATACCATTCCATGGCTGGGAGAGAAAGCATTCCTCAGATCTGATATTTGTTGTTTTGTTTTTCT
TTTTCTTGTCCCAGAGGAAAAGTGTTGATTTATATTCCTTCCACAGCTGTCACAATTTGTGATT
TACTTGGTGTCTGGTGGCTGTCACCTCTTGAATGGCACATGTCGCTGGCACTTCTCTCCTGTAA
TTTCTTCAAATATGGGGTGCATCCACACCCCACTCTGATAAGTTTGCCAATCATCTGTACATAA
TTAAACTATTTTCCGATGGCTGGTGCAGTGTC

hide sequence

RefSeq Acc Id:

XM_039092485 ⟹ XP_038948413

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,267,163 - 1,308,492 (+)	NCBI
mRatBN7.2	14	1,122,771 - 1,164,098 (+)	NCBI

RefSeq Acc Id:

XM_063273665 ⟹ XP_063129735

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,234,376 - 1,308,492 (+)	NCBI

RefSeq Acc Id:

XM_063273666 ⟹ XP_063129736

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,234,376 - 1,308,492 (+)	NCBI

RefSeq Acc Id:

XM_063273667 ⟹ XP_063129737

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	14	1,234,376 - 1,279,255 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_112292	(Get FASTA)	NCBI Sequence Viewer
	XP_006250645	(Get FASTA)	NCBI Sequence Viewer
	XP_006250646	(Get FASTA)	NCBI Sequence Viewer
	XP_017454878	(Get FASTA)	NCBI Sequence Viewer
	XP_038948413	(Get FASTA)	NCBI Sequence Viewer
	XP_063129735	(Get FASTA)	NCBI Sequence Viewer
	XP_063129736	(Get FASTA)	NCBI Sequence Viewer
	XP_063129737	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAA18911	(Get FASTA)	NCBI Sequence Viewer
	EDL84016	(Get FASTA)	NCBI Sequence Viewer
	EDL84017	(Get FASTA)	NCBI Sequence Viewer
	EDL84018	(Get FASTA)	NCBI Sequence Viewer
	EDL84019	(Get FASTA)	NCBI Sequence Viewer
	EDL84020	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000000064
	ENSRNOP00000081704
GenBank Protein	P97874	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_112292 ⟸ NM_031030

- UniProtKB:

P97874 (UniProtKB/Swiss-Prot), F1LMD9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSLLQSALDFLAGPGSLGGAAGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDLGSGR
EYALKRLLSNEEEKNRAIIQEVCFLKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG
QLVEFLRRVECKGPLSCDSILKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF
GSATTISHYPDYSWSAQKRAMVEEEITRNTTPMYRTPEIVDLYSNFPIGEKQDIWALGCILYLL
CFRQHPFEDGAKLRIVNGKYSIPVNDTRYTVFHDLIRGMLKVNPEERLSIAEVVRQLQEIAAAR
NVNPKAPITELLEQNGGYGNSGPSRAQPPSGGPVNSSGVLALAEYDQPYGGFLDILRGGTERLF
TNLKDTSSKVIQSVANYAKGDLDISYITSRIAVMSFPAEGVESAIKNNIEDVRLFLDAKHPGHY
AVYNLSPRIYRASKFHNRVTECGWAVRRAPHLHSLYTLCRSMHAWLREDHRNVCVVHCMDGRAA
SAVAVCAFLCFCRLFSTAEAAVYMFSMKRCPPGIWPSHKRYIEYVCDMVAEEPITPHSKPMLVK
SVVMTPVPLFSKQRNGCRPFCEVYVGEERVTTTSQEYDRMKEFKIEDGKAVIPLGITVQGDVLT
IIYHARSTLGGRLQAKMASMKMFQIQFHTGFVPRNATTVKFAKYDLDACDIQEKYPDLFQVNLE
VEVEPRDRPSRDVPPWENTSLRGLNPKILFSNREEQQDILSKFGKPELPRQPGSTAQYDAEAGS
PEAEITESDSPQSSSTDTNHFLHTLDWQEEKDPETGVDNTSPKESQSNLIADGDGSEVSDEEEA
SCPSEERKPGAGEDTPRLAAGTRQQDLIFDVGMLAAPQEPVQPEEGVDLLGLHSEGDLRPAAPL
QASGVQSSNTDLLSSLLEPSDASQVGPPGDLLGGETPLLLASPVSLLGVQSNLQGKVPDTVDPF
DQFLLPSSSDTQPCSKPDLFGEFLNSDSVASSTAFPSTHSAPPPSCSTAFLHLGDLPAEPNKVI
ASSSHPDLLGGWDTWAETALPGPASMPVPEGTLFSSAGHPAPPGPNPSQTKSQNPDPFADLSDL
SSSLQGLPAGLPAGSFVGTSATTHKSNSSWQTTRPTAPGTSWPPQAKPAPRASEQLRSHFSVIG
AREERGVRAPSFAQKPKVSENDFEDLLPNQGFSKSDKKGPKTMAEMRKQELARDTDPFKLKLLD
WIEGKERNIRALLSTLHTVLWDGESRWTPVSMADLVTPEQVKKQYRRAVLVVHPDKATGQPYEQ
SAKMIFMELNDAWSEFENQGSRPLF

hide sequence

RefSeq Acc Id:	XP_006250645 ⟸ XM_006250583
- Peptide Label:	isoform X2
- UniProtKB:	F1LMD9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLLQSALDFLAGPGSLGGAAGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDLGSGR EYALKRLLSNEEEKNRAIIQEVCFLKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG QLVEFLRRVECKGPLSCDSILKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF GSATTISHYPDYSWSAQKRAMVEEEITRNTTPMYRTPEIVDLYSNFPIGEKQDIWALGCILYLL CFRQHPFEDGAKLRIVNGKYSIPVNDTRYTVFHDLIRGMLKVNPEERLSIAEVVRQLQEIAAAR NVNPKAPITELLEQNGGYGNSGPSRAQPPSGGPVNSSGVLALAEYDQPYGGFLDILRGGTERLF TNLKDTSSKVIQSVANYAKGDLDISYITSRIAVMSFPAEGVESAIKNNIEDVRLFLDAKHPGHY AVYNLSPRIYRASKFHNRVTECGWAVRRAPHLHSLYTLCRSMHAWLREDHRNVCVVHCMDGRAA SAVAVCAFLCFCRLFSTAEAAVYMFSMKRCPPGIWPSHKRYIEYVCDMVAEEPITPHSKPMLVK SVVMTPVPLFSKQRNGCRPFCEVYVGEERVTTTSQEYDRMKEFKIEDGKAVIPLGITVQGDVLI IIYHARSTLGGRLQAKMASMKMFQIQFHTGFVPRNATTVKFAKYDLDACDIQEKYPDLFQVNLE VEVEPRDRPSRDVPPWENTSLRGLNPKILFSNREEQQDILSKFGKPELPRQPGSTAQYDAEAGS PEAEITESDSPQSSSTDTNHFLHTLDWQEEKDPETGVDNTSPKESQSNLIADGDGSEVSDEEEA SCPSEERKPGAGEDTPRLAAGTRQQDLIFDVGMLAAPQEPVQPEEGVDLLGLHSEGDLRPAAPL QASGVQSSNTDLLSSLLEPSDASQVGPPGDLLGVDPFDQFLLPSSSDTQPCSKPDLFGEFLNSD SVASSTAFPSTHSAPPPSCSTAFLHLGDLPAEPNKVIASSSHPDLLGGWDTWAETALPGPASMP VPEGTLFSSAGHPAPPGPNPSQTKSQNPDPFADLSDLSSSLQGLPAGLPAGSFVGTSATTHKSN SSWQTTRPTAPGTSWPPQAKPAPRASEQLRSHFSVIGAREERGVRAPSFAQKPKVSENDFEDLL PNQGFSKSDKKGPKTMAEMRKQELARDTDPFKLKLLDWIEGKERNIRALLSTLHTVLWDGESRW TPVSMADLVTPEQVKKQYRRAVLVVHPDKATGQPYEQSAKMIFMELNDAWSEFENQGSRPLF hide sequence

RefSeq Acc Id:	XP_006250646 ⟸ XM_006250584
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I5ZTC5 (UniProtKB/TrEMBL), F1LMD9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLLQSALDFLAGPGSLGGAAGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDLGSGR EYALKRLLSNEEEKNRAIIQEVCFLKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG QLVEFLRRVECKGPLSCDSILKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF GSATTISHYPDYSWSAQKRAMVEEEITRNTTPMYRTPEIVDLYSNFPIGEKQDIWALGCILYLL CFRQHPFEDGAKLRIVNGKYSIPVNDTRYTVFHDLIRGMLKVNPEERLSIAEVVRQLQEIAAAR NVNPKAPITELLEQNGGYGNSGPSRAQPPSGGPVNSSGVLALAEYDQPYGGFLDILRGGTERLF TNLKDTSSKVIQSVANYAKGDLDISYITSRIAVMSFPAEGVESAIKNNIEDVRLFLDAKHPGHY AVYNLSPRIYRASKFHNRVTECGWAVRRAPHLHSLYTLCRSMHAWLREDHRNVCVVHCMDGRAA SAVAVCAFLCFCRLFSTAEAAVYMFSMKRCPPGIWPSHKRYIEYVCDMVAEEPITPHSKPMLVK SVVMTPVPLFSKQRNGCRPFCEVYVGEERVTTTSQEYDRMKEFKIEDGKAVIPLGITVQGDVLI IIYHARSTLGGRLQAKMASMKMFQIQFHTGFVPRNATTVKFAKYDLDACDIQEKYPDLFQVNLE VEVEPRDRPSRDVPPWENTSLRGLNPKILFSNREEQQDILSKFEEKDPETGVDNTSPKESQSNL IADGDGSEVSDEEEASCPSEERKPGAGEDTPRLAAGTRQQDLIFDVGMLAAPQEPVQPEEGVDL LGLHSEGDLRPAAPLQASGVQSSNTDLLSSLLEPSDASQVGPPGDLLGGETPLLLASPVSLLGV QSNLQGKVPDTVDPFDQFLLPSSSDTQPCSKPDLFGEFLNSDSVASSTAFPSTHSAPPPSCSTA FLHLGDLPAEPNKVIASSSHPDLLGGWDTWAETALPGPASMPVPEGTLFSSAGHPAPPGPNPSQ TKSQNPDPFADLSDLSSSLQGLPAGLPAGSFVGTSATTHKSNSSWQTTRPTAPGTSWPPQAKPA PRASEQLRSHFSVIGAREERGVRAPSFAQKPKVSENDFEDLLPNQGFSKSDKKGPKTMAEMRKQ ELARDTDPFKLKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVSMADLVTPEQVKKQYRRAV LVVHPDKATGQPYEQSAKMIFMELNDAWSEFENQGSRPLF hide sequence

RefSeq Acc Id:	XP_017454878 ⟸ XM_017599389
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I5ZS37 (UniProtKB/TrEMBL)
- Sequence:	show sequence MHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQKRAMVEEEITRNTTPM YRTPEIVDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPVNDTRYTVFH DLIRGMLKVNPEERLSIAEVVRQLQEIAAARNVNPKAPITELLEQNGGYGNSGPSRAQPPSGGP VNSSGVLALAEYDQPYGGFLDILRGGTERLFTNLKDTSSKVIQSVANYAKGDLDISYITSRIAV MSFPAEGVESAIKNNIEDVRLFLDAKHPGHYAVYNLSPRIYRASKFHNRVTECGWAVRRAPHLH SLYTLCRSMHAWLREDHRNVCVVHCMDGRAASAVAVCAFLCFCRLFSTAEAAVYMFSMKRCPPG IWPSHKRYIEYVCDMVAEEPITPHSKPMLVKSVVMTPVPLFSKQRNGCRPFCEVYVGEERVTTT SQEYDRMKEFKIEDGKAVIPLGITVQGDVLIIIYHARSTLGGRLQAKMASMKMFQIQFHTGFVP RNATTVKFAKYDLDACDIQEKYPDLFQVNLEVEVEPRDRPSRDVPPWENTSLRGLNPKILFSNR EEQQDILSKFGKPELPRQPGSTAQYDAEAGSPEAEITESDSPQSSSTDTNHFLHTLDWQEEKDP ETGVDNTSPKESQSNLIADGDGSEVSDEEEASCPSEERKPGAGEDTPRLAAGTRQQDLIFDVGM LAAPQEPVQPEEGVDLLGLHSEGDLRPAAPLQASGVQSSNTDLLSSLLEPSDASQVGPPGDLLG GETPLLLASPVSLLGVQSNLQGKVPDTVDPFDQFLLPSSSDTQPCSKPDLFGEFLNSDSVASST AFPSTHSAPPPSCSTAFLHLGDLPAEPNKVIASSSHPDLLGGWDTWAETALPGPASMPVPEGTL FSSAGHPAPPGPNPSQTKSQNPDPFADLSDLSSSLQGLPAGLPAGSFVGTSATTHKSNSSWQTT RPTAPGTSWPPQAKPAPRASEQLRSHFSVIGAREERGVRAPSFAQKPKVSENDFEDLLPNQGFS KSDKKGPKTMAEMRKQELARDTDPFKLKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVSMA DLVTPEQVKKQYRRAVLVVHPDKATGQPYEQSAKMIFMELNDAWSEFENQGSRPLF hide sequence

Ensembl Acc Id:

ENSRNOP00000000064 ⟸ ENSRNOT00000000064

RefSeq Acc Id:	XP_038948413 ⟸ XM_039092485
- Peptide Label:	isoform X6

Ensembl Acc Id:

ENSRNOP00000058432 ⟸ ENSRNOT00000061720

Ensembl Acc Id:

ENSRNOP00000081704 ⟸ ENSRNOT00000105303

Ensembl Acc Id:

ENSRNOP00000081239 ⟸ ENSRNOT00000114393

RefSeq Acc Id:	XP_063129735 ⟸ XM_063273665
- Peptide Label:	isoform X1
- UniProtKB:	A0A8L2QS27 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063129736 ⟸ XM_063273666
- Peptide Label:	isoform X4
- UniProtKB:	F1LMD9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063129737 ⟸ XM_063273667
- Peptide Label:	isoform X7

Ensembl Acc Id:

ENSRNOP00000111853 ⟸ ENSRNOT00000135400

Ensembl Acc Id:

ENSRNOP00000100598 ⟸ ENSRNOT00000134932

Protein Domains

C2 tensin-type J Phosphatase tensin-type Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P97874-F1-model_v2	AlphaFold	P97874	1-1305	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13699148

Promoter ID:

EPDNEW_R9672

Type:

initiation region

Name:

Gak_1

Description:

cyclin G associated kinase

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	14	2,100,105 - 2,100,165	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621589	AgrOrtholog
BioCyc Gene	G2FUF-16681	BioCyc
Ensembl Genes	ENSRNOG00000000048	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000000064	ENTREZGENE
	ENSRNOT00000105303	ENTREZGENE
Gene3D-CATH	1.10.287.110	UniProtKB/Swiss-Prot
	2.60.40.1110	UniProtKB/Swiss-Prot
	3.90.190.10	UniProtKB/Swiss-Prot
	Transferase(Phosphotransferase) domain 1	UniProtKB/Swiss-Prot
InterPro	C2_domain_sf	UniProtKB/Swiss-Prot
	DnaJ_domain	UniProtKB/Swiss-Prot
	J_dom_sf	UniProtKB/Swiss-Prot
	Kinase-like_dom_sf	UniProtKB/Swiss-Prot
	Prot-tyrosine_phosphatase-like	UniProtKB/Swiss-Prot
	Prot_kinase_dom	UniProtKB/Swiss-Prot
	Ser/Thr_kinase_AS	UniProtKB/Swiss-Prot
	Tensin_C2-dom	UniProtKB/Swiss-Prot
	Tensin_phosphatase	UniProtKB/Swiss-Prot
KEGG Report	rno:81659	UniProtKB/Swiss-Prot
NCBI Gene	81659	ENTREZGENE
PANTHER	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	UniProtKB/Swiss-Prot
	CYCLIN-G-ASSOCIATED KINASE	UniProtKB/Swiss-Prot
Pfam	DnaJ	UniProtKB/Swiss-Prot
	Pkinase	UniProtKB/Swiss-Prot
	PTEN_C2	UniProtKB/Swiss-Prot
PhenoGen	Gak	PhenoGen
PROSITE	C2_TENSIN	UniProtKB/Swiss-Prot
	DNAJ_2	UniProtKB/Swiss-Prot
	PPASE_TENSIN	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_DOM	UniProtKB/Swiss-Prot
	PROTEIN_KINASE_ST	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000000048	RatGTEx
SMART	DnaJ	UniProtKB/Swiss-Prot
	PTEN_C2	UniProtKB/Swiss-Prot
	S_TKc	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF46565	UniProtKB/Swiss-Prot
	SSF49562	UniProtKB/Swiss-Prot
	SSF52799	UniProtKB/Swiss-Prot
	SSF56112	UniProtKB/Swiss-Prot
UniProt	A0A8I5ZS37	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZTC5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8L2QS27	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0L7P3_RAT	UniProtKB/TrEMBL
	A0ABK0M7C1_RAT	UniProtKB/TrEMBL
	F1LMD9	ENTREZGENE, UniProtKB/TrEMBL
	GAK_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2004-09-10	Gak	cyclin G associated kinase		cyclin G-associated kinase	Name updated	1299863	APPROVED
2002-08-07	Gak	cyclin G-associated kinase			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_domains	contains a serine/threonine kinase-like catalytic domain at the N-terminal, and a leucine zipper region at the C-terminal	728630
gene_physical_interaction	protein associates directly with cyclin G in vivo	728630

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD