Gene: Kdm1a (lysine demethylase 1A) Rattus norvegicus
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Symbol: Kdm1a
Name: lysine demethylase 1A
Description: ENCODES a protein that exhibits chromatin binding; transcription factor binding; androgen receptor binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome; cellular response to cAMP; cerebral cortex development; PARTICIPATES IN histone modification pathway; Notch signaling pathway; ASSOCIATED WITH breast cancer; Breast Neoplasms; Diabetic Retinopathy; FOUND IN nuclear chromatin; nucleus; DNA repair complex (ortholog); INTERACTS WITH aldehydo-D-glucose; bisphenol A; D-glucose
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: amine oxidase (flavin containing) domain 2; Aof2; Kdm1; LOC500569; lysine (K)-specific demethylase 1; lysine (K)-specific demethylase 1A; lysine-specific histone demethylase 1A; neuroprotective protein 3; RGD1562975; similar to AOF2 protein
Orthologs:
Homo sapiens (human) : KDM1A (lysine demethylase 1A)  HGNC  AGR
Mus musculus (house mouse) : Kdm1a (lysine (K)-specific demethylase 1A)  MGI
Chinchilla lanigera (long-tailed chinchilla) : Kdm1a (lysine demethylase 1A)
Pan paniscus (bonobo/pygmy chimpanzee) : KDM1A (lysine demethylase 1A)
Canis lupus familiaris (dog) : KDM1A (lysine demethylase 1A)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Kdm1a (lysine demethylase 1A)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05154,909,003 - 154,965,171 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.05158,674,383 - 158,730,358 (-)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.45155,299,289 - 155,358,404 (-)NCBIRGSC3.4rn4RGSC3.4
Celera5147,184,121 - 147,238,797 (-)NCBI
Cytogenetic Map5q36NCBImapview
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Kdm1a
AGR Gene
NCBI Gene
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RGD Object Information
RGD ID: 1562975
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2017-10-10
Status: ACTIVE