forebrain development - Ontology Report

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ONTOLOGY REPORT - ANNOTATIONS

Term:	forebrain development	go back to main search page
Accession:	GO:0030900	browse the term
Definition:	The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions).
Synonyms:	exact_synonym:	prosencephalon development

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forebrain development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Aldh1a2	aldehyde dehydrogenase 1 family, member A2			ISO	8	75,692,099	75,771,159	RGD:1624291	RGD
G	Apaf1	apoptotic peptidase activating factor 1			ISO	7	27,932,908	28,020,533	RGD:1624291	RGD
G	Aplp1	amyloid beta (A4) precursor-like protein 1			ISO	1	85,390,217	85,401,952	RGD:1624291	RGD
G	Aplp2	amyloid beta (A4) precursor-like protein 2			ISO				RGD:1624291	RGD
G	Aplp2	amyloid beta (A4) precursor-like protein 2			ISO				RGD:1624291	RGD
G	App	amyloid beta (A4) precursor protein			ISO	11	24,457,855	24,693,851	RGD:1624291	RGD
G	App	amyloid beta (A4) precursor protein			ISO	11	24,457,855	24,693,851	RGD:1624291	RGD
G	App	amyloid beta (A4) precursor protein			IEA	11	24,457,855	24,693,851	RGD:1600115	ENSEMBL
G	Arhgap35	Rho GTPase activating protein 35			ISO	1	76,757,031	76,824,155	RGD:1624291	RGD
G	Arid1a	AT rich interactive domain 1A (SWI-like)			ISO	5	151,355,617	151,398,647	RGD:1624291	RGD
G	Arx	aristaless related homeobox			ISO	X	80,631,375	80,643,989	RGD:1624291	RGD
G	Atrx	alpha thalassemia/mental retardation syndrome X-linked			ISO	X	93,903,794	94,051,337	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Cckar	cholecystokinin A receptor			ISO	14	62,052,510	62,057,201	RGD:1624291	RGD
G	Cckar	cholecystokinin A receptor			IEA	14	62,052,510	62,057,201	RGD:1600115	ENSEMBL
G	Ccr5	chemokine (C-C motif) receptor 5			IEP	8	128,907,157	128,912,272	RGD:4890442	RGD
G	Cdk5	cyclin-dependent kinase 5			ISO	4	6,119,704	6,124,186	RGD:1624291	RGD
G	Chrd	chordin			ISO	11	82,401,701	82,410,401	RGD:1624291	RGD
G	Chrd	chordin			IEA	11	82,401,701	82,410,401	RGD:1600115	ENSEMBL
G	Cnp	2',3'-cyclic nucleotide 3' phosphodiesterase			IEP	10	89,519,421	89,525,978	RGD:6483359	RGD
G	Ctnnb1	catenin (cadherin associated protein), beta 1			ISO	8	125,978,161	125,987,670	RGD:1624291	RGD
G	Ctnnb1	catenin (cadherin associated protein), beta 1			IEA	8	125,978,161	125,987,670	RGD:1600115	ENSEMBL
G	Dclk1	doublecortin-like kinase 1			ISO	2	144,678,222	144,754,237	RGD:1624291	RGD
G	Dclk1	doublecortin-like kinase 1			IEA	2	144,678,222	144,754,237	RGD:1600115	ENSEMBL
G	Dixdc1	DIX domain containing 1			IBA	8	54,018,179	54,073,235	RGD:1600115	RefGenome
G	Dkk1	dickkopf WNT signaling pathway inhibitor 1			ISO	1	234,392,743	234,396,426	RGD:1624291	RGD
G	Dlc1	deleted in liver cancer 1			ISO	16	59,312,930	59,355,129	RGD:1624291	RGD
G	Dlc1	deleted in liver cancer 1			IEA	16	59,312,930	59,355,129	RGD:1600115	ENSEMBL
G	Draxin	dorsal inhibitory axon guidance protein			ISO	5	165,179,954	165,193,917	RGD:1624291	RGD
G	Draxin	dorsal inhibitory axon guidance protein			IEA	5	165,179,954	165,193,917	RGD:1600115	ENSEMBL
G	Drd2	dopamine receptor D2			IMP	8	52,641,160	52,707,749	RGD:2311572	RGD
G	Dync2h1	dynein cytoplasmic 2 heavy chain 1			ISO	8	3,826,843	4,072,644	RGD:1624291	RGD
G	E2f1	E2F transcription factor 1			ISO	3	145,032,489	145,043,729	RGD:1624291	RGD
G	E2f1	E2F transcription factor 1			IEA	3	145,032,489	145,043,729	RGD:1600115	ENSEMBL
G	Emx2	empty spiracles homeobox 2			ISO	1	266,004,257	266,011,265	RGD:1624291	RGD
G	Emx2	empty spiracles homeobox 2			ISO	1	266,004,257	266,011,265	RGD:1624291	RGD
G	Fezf1	Fez family zinc finger 1			ISO	4	49,641,144	49,644,471	RGD:1624291	RGD
G	Fezf2	Fez family zinc finger 2			ISO	15	14,350,796	14,354,585	RGD:1624291	RGD
G	Fezf2	Fez family zinc finger 2			ISO	15	14,350,796	14,354,585	RGD:1624291	RGD
G	Fgfr3	fibroblast growth factor receptor 3			ISO	14	82,683,191	82,697,229	RGD:1624291	RGD
G	Foxg1	forkhead box G1			ISO	6	69,217,672	69,220,482	RGD:1624291	RGD
G	Foxg1	forkhead box G1			ISO	6	69,217,672	69,220,482	RGD:1624291	RGD
G	Foxg1	forkhead box G1			ISO	6	69,217,672	69,220,482	RGD:1624291	RGD
G	Foxg1	forkhead box G1			ISO	6	69,217,672	69,220,482	RGD:1624291	RGD
G	Foxg1	forkhead box G1			IEA	6	69,217,672	69,220,482	RGD:1600115	ENSEMBL
G	Frs2	fibroblast growth factor receptor substrate 2			ISO	7	56,409,863	56,490,535	RGD:1624291	RGD
G	Frs2	fibroblast growth factor receptor substrate 2			IEA	7	56,409,863	56,490,535	RGD:1600115	ENSEMBL
G	Fyn	FYN oncogene related to SRC, FGR, YES			ISO	20	43,501,853	43,695,567	RGD:1624291	RGD
G	Fyn	FYN oncogene related to SRC, FGR, YES			ISO	20	43,501,853	43,695,567	RGD:1624291	RGD
G	Fyn	FYN oncogene related to SRC, FGR, YES			IEA	20	43,501,853	43,695,567	RGD:1600115	ENSEMBL
G	Gli3	GLI family zinc finger 3			IMP	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3			ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
G	Gnao1	guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O			IEP	19	11,472,083	11,623,600	RGD:2302010	RGD
G	Gsc	goosecoid homeobox			ISO	6	128,526,645	128,528,684	RGD:1624291	RGD
G	Gsc	goosecoid homeobox			IEA	6	128,526,645	128,528,684	RGD:1600115	ENSEMBL
G	Hhex	hematopoietically expressed homeobox			ISO	1	241,736,542	241,742,129	RGD:1624291	RGD
G	Hhex	hematopoietically expressed homeobox			ISO	1	241,736,542	241,742,129	RGD:1624291	RGD
G	Hhex	hematopoietically expressed homeobox			ISO	1	241,736,542	241,742,129	RGD:1624291	RGD
G	Htra2	HtrA serine peptidase 2			IEA	4	117,262,206	117,265,368	RGD:1600115	ENSEMBL
G	Htra2	HtrA serine peptidase 2			ISO	4	117,262,206	117,265,368	RGD:1624291	RGD
G	Ikzf1	IKAROS family zinc finger 1			ISO	14	92,560,200	92,657,336	RGD:1624291	RGD
G	Ikzf1	IKAROS family zinc finger 1			ISO	14	92,560,200	92,657,336	RGD:1624291	RGD
G	Ikzf1	IKAROS family zinc finger 1			IEA	14	92,560,200	92,657,336	RGD:1600115	ENSEMBL
G	Kdm2b	lysine (K)-specific demethylase 2B			ISO	12	34,672,334	34,802,802	RGD:1624291	RGD
G	LOC100910454	twisted gastrulation protein homolog 1-like			IEA				RGD:1600115	ENSEMBL
G	Lrp2	low density lipoprotein receptor-related protein 2			ISO	3	51,563,764	51,724,478	RGD:1624291	RGD
G	Lrp6	low density lipoprotein receptor-related protein 6			ISO	4	171,337,114	171,444,932	RGD:1624291	RGD
G	Mapk8ip3	mitogen-activated protein kinase 8 interacting protein 3			ISO	10	14,147,895	14,186,277	RGD:1624291	RGD
G	Mapk8ip3	mitogen-activated protein kinase 8 interacting protein 3			ISO	10	14,147,895	14,186,277	RGD:1624291	RGD
G	Mecom	MDS1 and EVI1 complex locus			IEA	2	114,814,409	114,882,676	RGD:1600115	ENSEMBL
G	Msx1	msh homeobox 1			ISO	14	78,257,345	78,261,144	RGD:1624291	RGD
G	Msx1	msh homeobox 1			ISO	14	78,257,345	78,261,144	RGD:1624291	RGD
G	Ncor2	nuclear receptor co-repressor 2			ISO	12	32,617,643	32,725,753	RGD:1624291	RGD
G	Nde1	nudE nuclear distribution E homolog 1 (A. nidulans)			ISO	10	777,877	814,260	RGD:1624291	RGD
G	Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1			ISO	18	56,638,891	56,677,831	RGD:1624291	RGD
G	Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1			IEA	18	56,638,891	56,677,831	RGD:1600115	ENSEMBL
G	Neurog2	neurogenin 2			ISO	2	224,896,395	224,897,186	RGD:1624291	RGD
G	Neurog2	neurogenin 2			IEA	2	224,896,395	224,897,186	RGD:1600115	ENSEMBL
G	Neurog3	neurogenin 3			IEP	20	29,522,778	29,524,261	RGD:633362	RGD
G	Nfib	nuclear factor I/B			ISO	5	101,184,253	101,409,907	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nog	noggin			IEP	10	77,689,244	77,690,871	RGD:1358324	RGD
G	Notch1	notch 1			ISO	3	4,631,797	4,677,640	RGD:1624291	RGD
G	Notch1	notch 1			IEA	3	4,631,797	4,677,640	RGD:1600115	ENSEMBL
G	Notch3	notch 3			ISO	7	12,688,267	12,740,015	RGD:1624291	RGD
G	Nr2f1	nuclear receptor subfamily 2, group F, member 1			ISO	2	5,765,399	5,794,104	RGD:1624291	RGD
G	Nr2f1	nuclear receptor subfamily 2, group F, member 1			IEA	2	5,765,399	5,794,104	RGD:1600115	ENSEMBL
G	Nr2f2	nuclear receptor subfamily 2, group F, member 2			ISO	1	125,280,974	125,286,929	RGD:1624291	RGD
G	Nr2f2	nuclear receptor subfamily 2, group F, member 2			IEA	1	125,280,974	125,286,929	RGD:1600115	ENSEMBL
G	Numb	numb homolog (Drosophila)			ISO	6	107,838,216	107,882,302	RGD:1624291	RGD
G	Numbl	numb homolog (Drosophila)-like			ISO	1	82,333,804	82,356,657	RGD:1624291	RGD
G	Otx1	orthodenticle homeobox 1			ISO	14	102,721,413	102,724,748	RGD:1624291	RGD
G	Otx1	orthodenticle homeobox 1			ISO	14	102,721,413	102,724,748	RGD:1624291	RGD
G	Otx2	orthodenticle homeobox 2			ISO	15	24,622,851	24,632,435	RGD:1624291	RGD
G	Otx2	orthodenticle homeobox 2			ISO	15	24,622,851	24,632,435	RGD:1624291	RGD
G	Otx2	orthodenticle homeobox 2			ISO	15	24,622,851	24,632,435	RGD:1624291	RGD
G	Pax6	paired box 6			ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6			ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6			ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pcdh9	protocadherin 9			IEP	15	75,827,180	76,739,147	RGD:2316761	RGD
G	Pou3f1	POU class 3 homeobox 1			ISO	5	143,981,547	143,984,527	RGD:1624291	RGD
G	Prkg1	protein kinase, cGMP-dependent, type 1			ISO	1	234,420,597	235,765,375	RGD:1624291	RGD
G	Psen1	presenilin 1			ISO	6	107,737,543	107,776,357	RGD:1624291	RGD
G	Psen2	presenilin 2			ISO	13	95,934,674	95,951,836	RGD:1624291	RGD
G	Psen2	presenilin 2			IEA	13	95,934,674	95,951,836	RGD:1600115	ENSEMBL
G	Reln	reelin			ISO	4	8,150,873	8,609,141	RGD:1624291	RGD
G	Rfx4	regulatory factor X, 4 (influences HLA class II expression)			ISO	7	20,976,369	21,052,088	RGD:1624291	RGD
G	Setd2	SET domain containing 2			ISO	8	114,913,851	114,999,955	RGD:1624291	RGD
G	Shh	sonic hedgehog			ISO	4	2,200,504	2,209,657	RGD:1624291	RGD
G	Shh	sonic hedgehog			ISS	4	2,200,504	2,209,657	RGD:1600115	UniProtKB
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4			ISO	8	20,720,915	20,812,157	RGD:1624291	RGD
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4			IEA	8	20,720,915	20,812,157	RGD:1600115	ENSEMBL
G	Sox2	SRY (sex determining region Y)-box 2			ISO	2	120,969,021	120,971,430	RGD:1624291	RGD
G	Src	v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)			ISO	3	148,157,256	148,170,524	RGD:1624291	RGD
G	Src	v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)			IEA	3	148,157,256	148,170,524	RGD:1600115	ENSEMBL
G	Sstr1	somatostatin receptor 1			IEP	6	78,803,393	78,806,978	RGD:2325003	RGD
G	Sstr2	somatostatin receptor 2			IEP	10	103,246,880	103,254,444	RGD:2325003	RGD
G	Sstr3	somatostatin receptor 3			IEP	7	116,495,750	116,502,948	RGD:2325003	RGD
G	Sstr4	somatostatin receptor 4			IEP	3	137,150,419	137,152,284	RGD:2325003	RGD
G	Stil	Scl/Tal1 interrupting locus			ISO	5	135,365,417	135,416,566	RGD:1624291	RGD
G	Top2b	topoisomerase (DNA) II beta			ISO				RGD:1624291	RGD
G	Tp73	tumor protein p73			ISO	5	170,848,979	171,078,739	RGD:1624291	RGD
G	Twsg1	twisted gastrulation homolog 1 (Drosophila)			ISO	9	104,694,731	104,729,090	RGD:1624291	RGD
G	Twsg1	twisted gastrulation homolog 1 (Drosophila)			ISO	9	104,694,731	104,729,090	RGD:1624291	RGD
G	Twsg1	twisted gastrulation homolog 1 (Drosophila)			IEA	9	104,694,731	104,729,090	RGD:1600115	ENSEMBL
G	Vax2	ventral anterior homeobox 2			ISO	4	117,903,748	117,927,411	RGD:1624291	RGD
G	Vax2	ventral anterior homeobox 2			IEA	4	117,903,748	117,927,411	RGD:1600115	ENSEMBL
G	Vax2	ventral anterior homeobox 2			ISS	4	117,903,748	117,927,411	RGD:1600115	UniProtKB
G	Zeb1	zinc finger E-box binding homeobox 1			IEP	17	60,177,150	60,198,584	RGD:2325879	RGD
G	Zic5	Zic family member 5			ISO	15	107,592,742	107,598,927	RGD:1624291	RGD
G	Zic5	Zic family member 5			IEA	15	107,592,742	107,598,927	RGD:1600115	ENSEMBL
adenohypophysis development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Drd2	dopamine receptor D2			ISO	8	52,641,160	52,707,749	RGD:1624291	RGD
G	Drd2	dopamine receptor D2			IEA	8	52,641,160	52,707,749	RGD:1600115	ENSEMBL
G	Ghrh	growth hormone releasing hormone			TAS	3	148,027,235	148,046,352	RGD:1601329	RGD
G	Ghrh	growth hormone releasing hormone			ISO	3	148,027,235	148,046,352	RGD:1624291	RGD
G	Ghrh	growth hormone releasing hormone			IEA	3	148,027,235	148,046,352	RGD:1600115	ENSEMBL
G	Ghrhr	growth hormone releasing hormone receptor			ISO	4	84,135,530	84,148,503	RGD:1624291	RGD
G	Ghrhr	growth hormone releasing hormone receptor			ISO	4	84,135,530	84,148,503	RGD:1624291	RGD
G	Ghrhr	growth hormone releasing hormone receptor			ISO	4	84,135,530	84,148,503	RGD:1624291	RGD
G	Gsx1	GS homeobox 1			ISO	12	8,551,150	8,552,445	RGD:1624291	RGD
G	Gsx1	GS homeobox 1			IEA	12	8,551,150	8,552,445	RGD:1600115	ENSEMBL
G	Hes1	hairy and enhancer of split 1 (Drosophila)			ISO	11	72,603,482	72,605,673	RGD:1624291	RGD
G	Pou1f1	POU class 1 homeobox 1			IMP	11	2,959,383	2,980,545	RGD:1601440	RGD
G	Prop1	PROP paired-like homeobox 1			ISO	10	36,527,112	36,529,573	RGD:1624291	RGD
G	Slc6a3	solute carrier family 6 (neurotransmitter transporter, dopamine), member 3			ISO	1	30,516,568	30,557,540	RGD:1624291	RGD
G	Slc6a3	solute carrier family 6 (neurotransmitter transporter, dopamine), member 3			IEA	1	30,516,568	30,557,540	RGD:1600115	ENSEMBL
G	Smo	smoothened, frizzled family receptor			IBA	4	56,623,494	56,645,571	RGD:1600115	RefGenome
G	Sox2	SRY (sex determining region Y)-box 2			ISO	2	120,969,021	120,971,430	RGD:1624291	RGD
G	Sox2	SRY (sex determining region Y)-box 2			IEA	2	120,969,021	120,971,430	RGD:1600115	ENSEMBL
adenohypophysis morphogenesis
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Duox2	dual oxidase 2			ISO	3	109,059,360	109,077,106	RGD:1624291	RGD
G	Duox2	dual oxidase 2			IEA	3	109,059,360	109,077,106	RGD:1600115	ENSEMBL
ammon gyrus development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Lrp8	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor			ISO	5	128,905,612	128,975,702	RGD:1624291	RGD
anterior commissure morphogenesis
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Bhlhe22	basic helix-loop-helix family, member e22			ISO	2	103,086,407	103,089,400	RGD:1624291	RGD
G	Bhlhe22	basic helix-loop-helix family, member e22			IEA	2	103,086,407	103,089,400	RGD:1600115	ENSEMBL
G	Nfib	nuclear factor I/B			ISO	5	101,184,253	101,409,907	RGD:1624291	RGD
G	Nfib	nuclear factor I/B			IEA	5	101,184,253	101,409,907	RGD:1600115	ENSEMBL
G	Nfib	nuclear factor I/B			ISS	5	101,184,253	101,409,907	RGD:1600115	UniProtKB
G	Plxna4a	plexin A4, A			IEA	4	59,254,319	59,692,187	RGD:1600115	ENSEMBL
G	Tsku	tsukushi, small leucine rich proteoglycan			IEA	1	155,611,069	155,622,378	RGD:1600115	ENSEMBL
G	Tsku	tsukushi, small leucine rich proteoglycan			ISO	1	155,611,069	155,622,378	RGD:1624291	RGD
Cajal-Retzius cell differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Psen1	presenilin 1			ISO	6	107,737,543	107,776,357	RGD:1624291	RGD
G	Psen1	presenilin 1			IEA	6	107,737,543	107,776,357	RGD:1600115	ENSEMBL
caudate nucleus development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Foxp2	forkhead box P2			ISO	4	40,719,812	40,977,517	RGD:1624291	RGD
G	Foxp2	forkhead box P2			IEA	4	40,719,812	40,977,517	RGD:1600115	ENSEMBL
G	Foxp2	forkhead box P2			IBA	4	40,719,812	40,977,517	RGD:1600115	RefGenome
G	Foxp3	forkhead box P3			IRD	X	26,950,006	26,965,329	RGD:1600115	RefGenome
cell migration in diencephalon
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Foxb1	forkhead box B1			ISS	8	74,200,271	74,202,891	RGD:1600115	UniProtKB
cell motility involved in cerebral cortex radial glia guided migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Dab2ip	DAB2 interacting protein			ISS	3	14,667,700	14,840,625	RGD:1600115	UniProtKB
G	Dab2ip	DAB2 interacting protein			ISO	3	14,667,700	14,840,625	RGD:1624291	RGD
cell proliferation in forebrain
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Arx	aristaless related homeobox			ISO	X	80,631,375	80,643,989	RGD:1624291	RGD
G	Disc1	disrupted in schizophrenia 1			ISO	19	55,265,116	55,449,375	RGD:1624291	RGD
G	Disc1	disrupted in schizophrenia 1			IEA	19	55,265,116	55,449,375	RGD:1600115	ENSEMBL
G	Dixdc1	DIX domain containing 1			ISO	8	54,018,179	54,073,235	RGD:1624291	RGD
G	Emx2	empty spiracles homeobox 2			ISO	1	266,004,257	266,011,265	RGD:1624291	RGD
G	Emx2	empty spiracles homeobox 2			IEA	1	266,004,257	266,011,265	RGD:1600115	ENSEMBL
G	Fabp7	fatty acid binding protein 7, brain			ISO	20	36,812,518	36,816,050	RGD:1624291	RGD
G	Fabp7	fatty acid binding protein 7, brain			IEA	20	36,812,518	36,816,050	RGD:1600115	ENSEMBL
G	Fgf8	fibroblast growth factor 8			ISO	1	250,951,023	250,956,730	RGD:1624291	RGD
G	Fgf8	fibroblast growth factor 8			IEA	1	250,951,023	250,956,730	RGD:1600115	ENSEMBL
G	Hmga2	high mobility group AT-hook 2			ISO	7	59,638,555	59,753,791	RGD:1624291	RGD
G	Hmga2	high mobility group AT-hook 2			IEA	7	59,638,555	59,753,791	RGD:1600115	ENSEMBL
G	Lhx5	LIM homeobox 5			ISO	12	37,323,820	37,332,257	RGD:1624291	RGD
G	Lhx5	LIM homeobox 5			IEA	12	37,323,820	37,332,257	RGD:1600115	ENSEMBL
G	Ncor2	nuclear receptor co-repressor 2			ISO	12	32,617,643	32,725,753	RGD:1624291	RGD
G	Ncor2	nuclear receptor co-repressor 2			IEA	12	32,617,643	32,725,753	RGD:1600115	ENSEMBL
G	Rrm1	ribonucleotide reductase M1			IEP	1	159,930,994	159,937,860	RGD:5133694	RGD
G	Wnt3a	wingless-type MMTV integration site family, member 3A			ISO	10	45,553,682	45,594,983	RGD:1624291	RGD
G	Wnt7a	wingless-type MMTV integration site family, member 7A			ISO	4	125,541,281	125,586,167	RGD:1624291	RGD
G	Wnt7b	wingless-type MMTV integration site family, member 7B			ISO	7	123,533,713	123,554,333	RGD:1624291	RGD
G	Zeb2	zinc finger E-box binding homeobox 2			ISO	3	25,513,009	25,654,964	RGD:1624291	RGD
G	Zeb2	zinc finger E-box binding homeobox 2			IEA	3	25,513,009	25,654,964	RGD:1600115	ENSEMBL
cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Dab1	Dab, reelin signal transducer, homolog 1 (Drosophila)			ISO	5	125,434,133	125,694,562	RGD:1624291	RGD
G	Dab1	Dab, reelin signal transducer, homolog 1 (Drosophila)			IEA	5	125,434,133	125,694,562	RGD:1600115	ENSEMBL
cerebral cortex cell migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cx3cr1	chemokine (C-X3-C motif) receptor 1			ISO	8	125,033,630	125,047,335	RGD:1624291	RGD
G	Cx3cr1	chemokine (C-X3-C motif) receptor 1			IEA	8	125,033,630	125,047,335	RGD:1600115	ENSEMBL
G	Dab1	Dab, reelin signal transducer, homolog 1 (Drosophila)			ISO	5	125,434,133	125,694,562	RGD:1624291	RGD
G	Dixdc1	DIX domain containing 1			ISO	8	54,018,179	54,073,235	RGD:1624291	RGD
G	Egfr	epidermal growth factor receptor			ISO	14	97,617,358	97,788,211	RGD:1624291	RGD
G	Egfr	epidermal growth factor receptor			IEA	14	97,617,358	97,788,211	RGD:1600115	ENSEMBL
G	Fgf13	fibroblast growth factor 13			ISO	X	144,199,534	144,533,485	RGD:1624291	RGD
G	Fgf13	fibroblast growth factor 13			ISS	X	144,199,534	144,533,485	RGD:1600115	UniProtKB
G	Lrp6	low density lipoprotein receptor-related protein 6			ISO	4	171,337,114	171,444,932	RGD:1624291	RGD
G	Lrp6	low density lipoprotein receptor-related protein 6			IEA	4	171,337,114	171,444,932	RGD:1600115	ENSEMBL
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			IEA	6	76,916,943	76,920,133	RGD:1600115	ENSEMBL
G	Pex13	peroxisomal biogenesis factor 13			ISO	14	104,550,699	104,571,485	RGD:1624291	RGD
G	Pex13	peroxisomal biogenesis factor 13			IEA	14	104,550,699	104,571,485	RGD:1600115	ENSEMBL
G	Pex5	peroxisomal biogenesis factor 5			ISO	4	160,567,258	160,595,985	RGD:1624291	RGD
G	Pex5	peroxisomal biogenesis factor 5			ISO	4	160,567,258	160,595,985	RGD:1624291	RGD
G	Psen1	presenilin 1			ISO	6	107,737,543	107,776,357	RGD:1624291	RGD
G	Psen1	presenilin 1			IEA	6	107,737,543	107,776,357	RGD:1600115	ENSEMBL
G	Rhoa	ras homolog family member A			ISO				RGD:1624291	RGD
cerebral cortex development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ahsg	alpha-2-HS-glycoprotein			IEP	11	80,330,615	80,336,658	RGD:1626077	RGD
G	Ascl1	achaete-scute complex homolog 1 (Drosophila)			ISO	7	24,145,578	24,168,494	RGD:1624291	RGD
G	Ascl1	achaete-scute complex homolog 1 (Drosophila)			IEA	7	24,145,578	24,168,494	RGD:1600115	ENSEMBL
G	Atg7	autophagy related 7			ISO	4	150,814,706	150,992,704	RGD:1624291	RGD
G	Atg7	autophagy related 7			IEA	4	150,814,706	150,992,704	RGD:1600115	ENSEMBL
G	Atic	5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase			IEP	9	70,676,744	70,696,865	RGD:2301991	RGD
G	Atoh1	atonal homolog 1 (Drosophila)			ISO	4	94,109,650	94,111,745	RGD:1624291	RGD
G	Atoh1	atonal homolog 1 (Drosophila)			IEA	4	94,109,650	94,111,745	RGD:1600115	ENSEMBL
G	Bax	Bcl2-associated X protein			ISO	1	95,933,023	95,938,176	RGD:1624291	RGD
G	Bax	Bcl2-associated X protein			IEA	1	95,933,023	95,938,176	RGD:1600115	ENSEMBL
G	Bbs1	Bardet-Biedl syndrome 1			ISO	1	207,503,399	207,521,683	RGD:1624291	RGD
G	Bbs1	Bardet-Biedl syndrome 1			IEA	1	207,503,399	207,521,683	RGD:1600115	ENSEMBL
G	Bbs2	Bardet-Biedl syndrome 2			ISO	19	11,347,432	11,382,830	RGD:1624291	RGD
G	Bbs2	Bardet-Biedl syndrome 2			IEA	19	11,347,432	11,382,830	RGD:1600115	ENSEMBL
G	Bbs4	Bardet-Biedl syndrome 4			ISO	8	63,153,456	63,189,904	RGD:1624291	RGD
G	Bbs4	Bardet-Biedl syndrome 4			IEA	8	63,153,456	63,189,904	RGD:1600115	ENSEMBL
G	Ccdc85c	coiled-coil domain containing 85C			ISO	6	132,572,485	132,641,431	RGD:1624291	RGD
G	Cdk5	cyclin-dependent kinase 5			ISO	4	6,119,704	6,124,186	RGD:1624291	RGD
G	Cdon	cell adhesion associated, oncogene regulated			ISO	8	35,238,899	35,291,743	RGD:1624291	RGD
G	Cdon	cell adhesion associated, oncogene regulated			IEA	8	35,238,899	35,291,743	RGD:1600115	ENSEMBL
G	Cep120	centrosomal protein 120			ISO	18	49,192,432	49,255,022	RGD:1624291	RGD
G	Cep120	centrosomal protein 120			IEA	18	49,192,432	49,255,022	RGD:1600115	ENSEMBL
G	Cntnap2	contactin associated protein-like 2			ISO	4	74,277,978	75,440,178	RGD:1624291	RGD
G	Cntnap2	contactin associated protein-like 2			ISO	4	74,277,978	75,440,178	RGD:1624291	RGD
G	Dab1	Dab, reelin signal transducer, homolog 1 (Drosophila)			IEP	5	125,434,133	125,694,562	RGD:2324624	RGD
G	Dicer1	dicer 1, ribonuclease type III			ISO	6	128,777,468	128,838,780	RGD:1624291	RGD
G	Dicer1	dicer 1, ribonuclease type III			IEA	6	128,777,468	128,838,780	RGD:1600115	ENSEMBL
G	Emx1	empty spiracles homeobox 1			ISO	4	119,420,621	119,436,740	RGD:1624291	RGD
G	Emx1	empty spiracles homeobox 1			ISO	4	119,420,621	119,436,740	RGD:1624291	RGD
G	Emx2	empty spiracles homeobox 2			ISO	1	266,004,257	266,011,265	RGD:1624291	RGD
G	Foxg1	forkhead box G1			ISO	6	69,217,672	69,220,482	RGD:1624291	RGD
G	Foxp2	forkhead box P2			ISO	4	40,719,812	40,977,517	RGD:1624291	RGD
G	Foxp2	forkhead box P2			IEA	4	40,719,812	40,977,517	RGD:1600115	ENSEMBL
G	Foxp2	forkhead box P2			IBA	4	40,719,812	40,977,517	RGD:1600115	RefGenome
G	Foxp3	forkhead box P3			IRD	X	26,950,006	26,965,329	RGD:1600115	RefGenome
G	Gart	phosphoribosylglycinamide formyltransferase			IEP	11	31,594,859	31,620,110	RGD:2301991	RGD
G	Gng12	guanine nucleotide binding protein (G protein), gamma 12			IEP	4	96,622,363	96,624,479	RGD:2314446	RGD
G	Grin1	glutamate receptor, ionotropic, N-methyl D-aspartate 1			ISO	3	3,453,784	3,480,381	RGD:1624291	RGD
G	Grin1	glutamate receptor, ionotropic, N-methyl D-aspartate 1			ISO	3	3,453,784	3,480,381	RGD:1624291	RGD
G	Grin1	glutamate receptor, ionotropic, N-methyl D-aspartate 1			IEA	3	3,453,784	3,480,381	RGD:1600115	ENSEMBL
G	Grin2a	glutamate receptor, ionotropic, N-methyl D-aspartate 2A			IEP	10	5,588,229	6,004,780	RGD:2325985	RGD
G	Grin2b	glutamate receptor, ionotropic, N-methyl D-aspartate 2B			IEP	4	172,721,895	173,183,187	RGD:2325985	RGD
G	Hif1a	hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)			ISO	6	96,419,024	96,463,891	RGD:1624291	RGD
G	Hif1a	hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)			IEA	6	96,419,024	96,463,891	RGD:1600115	ENSEMBL
G	Lhx2	LIM homeobox 2			ISO	3	18,129,455	18,147,357	RGD:1624291	RGD
G	Lrp6	low density lipoprotein receptor-related protein 6			ISO	4	171,337,114	171,444,932	RGD:1624291	RGD
G	Lrp6	low density lipoprotein receptor-related protein 6			IBA	4	171,337,114	171,444,932	RGD:1600115	RefGenome
G	Lrp8	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor			IEP	5	128,905,612	128,975,702	RGD:2324624	RGD
G	Mcph1	microcephalin 1			ISO	16	75,839,877	76,026,968	RGD:1624291	RGD
G	Mdk	midkine			IEA	3	76,309,988	76,311,345	RGD:1600115	ENSEMBL
G	Mkks	McKusick-Kaufman syndrome			ISO	3	124,975,099	124,993,345	RGD:1624291	RGD
G	Mkks	McKusick-Kaufman syndrome			IEA	3	124,975,099	124,993,345	RGD:1600115	ENSEMBL
G	Ncoa1	nuclear receptor coactivator 1			IEP	6	27,224,396	27,473,926	RGD:5688241	RGD
G	Nde1	nudE nuclear distribution E homolog 1 (A. nidulans)			ISO	10	777,877	814,260	RGD:1624291	RGD
G	Nde1	nudE nuclear distribution E homolog 1 (A. nidulans)			ISO	10	777,877	814,260	RGD:1624291	RGD
G	Nde1	nudE nuclear distribution E homolog 1 (A. nidulans)			ISS	10	777,877	814,260	RGD:1600115	UniProtKB
G	Nf1	neurofibromin 1			ISO	10	65,574,833	65,766,305	RGD:1624291	RGD
G	Nf1	neurofibromin 1			ISS	10	65,574,833	65,766,305	RGD:1600115	HGNC
G	Npy	neuropeptide Y			ISO	4	78,038,013	78,045,187	RGD:1624291	RGD
G	Ntrk2	neurotrophic tyrosine kinase, receptor, type 2			ISO	17	11,494,463	11,811,654	RGD:1624291	RGD
G	Ntrk2	neurotrophic tyrosine kinase, receptor, type 2			ISS	17	11,494,463	11,811,654	RGD:1600115	UniProtKB
G	Pafah1b1	platelet-activating factor acetylhydrolase 1b, regulatory subunit 1			ISO	10	61,955,348	62,037,871	RGD:1624291	RGD
G	Pafah1b1	platelet-activating factor acetylhydrolase 1b, regulatory subunit 1			ISO	10	61,955,348	62,037,871	RGD:1624291	RGD
G	Pafah1b1	platelet-activating factor acetylhydrolase 1b, regulatory subunit 1			ISO	10	61,955,348	62,037,871	RGD:1624291	RGD
G	Plcb1	phospholipase C, beta 1 (phosphoinositide-specific)			ISO	3	122,797,718	123,523,675	RGD:1624291	RGD
G	Plcb1	phospholipase C, beta 1 (phosphoinositide-specific)			ISS	3	122,797,718	123,523,675	RGD:1600115	BHF-UCL
G	Psen1	presenilin 1			ISO	6	107,737,543	107,776,357	RGD:1624291	RGD
G	Reln	reelin			IEP	4	8,150,873	8,609,141	RGD:634730	RGD
G	Reln	reelin			ISO	4	8,150,873	8,609,141	RGD:1624291	RGD
G	Sox2	SRY (sex determining region Y)-box 2			ISO	2	120,969,021	120,971,430	RGD:1624291	RGD
G	Sox2	SRY (sex determining region Y)-box 2			IEA	2	120,969,021	120,971,430	RGD:1600115	ENSEMBL
G	Srd5a1	steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)			IEP	17	3,845,190	3,879,165	RGD:4892048	RGD
G	Tacc1	transforming, acidic coiled-coil containing protein 1			ISO	16	71,241,785	71,304,959	RGD:1624291	RGD
G	Tacc1	transforming, acidic coiled-coil containing protein 1			IEA	16	71,241,785	71,304,959	RGD:1600115	ENSEMBL
G	Tacc2	transforming, acidic coiled-coil containing protein 2			ISO	1	189,894,937	190,085,789	RGD:1624291	RGD
G	Tacc2	transforming, acidic coiled-coil containing protein 2			IEA	1	189,894,937	190,085,789	RGD:1600115	ENSEMBL
G	Tacc3	transforming, acidic coiled-coil containing protein 3			ISO	14	82,746,460	82,760,864	RGD:1624291	RGD
G	Tfap2c	transcription factor AP-2 gamma			ISO	3	163,459,283	163,467,166	RGD:1624291	RGD
G	Tfap2c	transcription factor AP-2 gamma			IEA	3	163,459,283	163,467,166	RGD:1600115	ENSEMBL
G	Th	tyrosine hydroxylase			IEP	1	203,164,253	203,171,506	RGD:5128671	RGD
G	Tsc1	tuberous sclerosis 1			ISO	3	7,645,313	7,672,944	RGD:1624291	RGD
G	Tsc1	tuberous sclerosis 1			IEA	3	7,645,313	7,672,944	RGD:1600115	ENSEMBL
G	Vldlr	very low density lipoprotein receptor			IEP	1	230,666,736	230,697,748	RGD:2324624	RGD
G	Wdr62	WD repeat domain 62			ISO	1	85,448,728	85,482,510	RGD:1624291	RGD
G	Ywhae	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide			ISO	10	63,072,128	63,109,833	RGD:1624291	RGD
G	Ywhae	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide			IEA	10	63,072,128	63,109,833	RGD:1600115	ENSEMBL
G	Zfp238	zinc finger protein 238			IEA	13	93,345,905	93,347,473	RGD:1600115	ENSEMBL
G	Zfp238	zinc finger protein 238			ISO	13	93,345,905	93,347,473	RGD:1624291	RGD
cerebral cortex GABAergic interneuron differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ascl1	achaete-scute complex homolog 1 (Drosophila)			ISO	7	24,145,578	24,168,494	RGD:1624291	RGD
G	Ascl1	achaete-scute complex homolog 1 (Drosophila)			IEA	7	24,145,578	24,168,494	RGD:1600115	ENSEMBL
G	Dlx1	distal-less homeobox 1			ISO	3	53,837,052	53,841,642	RGD:1624291	RGD
G	Dlx2	distal-less homeobox 2			ISO	3	53,852,209	53,854,092	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			IEA	6	76,916,943	76,920,133	RGD:1600115	ENSEMBL
cerebral cortex GABAergic interneuron fate commitment
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Dlx2	distal-less homeobox 2			ISO	3	53,852,209	53,854,092	RGD:1624291	RGD
cerebral cortex GABAergic interneuron migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Arx	aristaless related homeobox			ISO	X	80,631,375	80,643,989	RGD:1624291	RGD
G	Cntn2	contactin 2 (axonal)			ISO	13	45,399,915	45,428,789	RGD:1624291	RGD
G	Cntn2	contactin 2 (axonal)			IEA	13	45,399,915	45,428,789	RGD:1600115	ENSEMBL
G	Drd1	dopamine receptor D1			ISO	17	16,655,926	16,658,161	RGD:1624291	RGD
G	Drd1	dopamine receptor D1			IEA	17	16,655,926	16,658,161	RGD:1600115	ENSEMBL
G	Drd2	dopamine receptor D2			ISO	8	52,641,160	52,707,749	RGD:1624291	RGD
G	Drd2	dopamine receptor D2			IEA	8	52,641,160	52,707,749	RGD:1600115	ENSEMBL
G	Fezf2	Fez family zinc finger 2			ISO	15	14,350,796	14,354,585	RGD:1624291	RGD
G	Lhx6	LIM homeobox 6			ISO	3	15,192,524	15,216,076	RGD:1624291	RGD
cerebral cortex neuron differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Emx1	empty spiracles homeobox 1			ISO	4	119,420,621	119,436,740	RGD:1624291	RGD
G	Eomes	eomesodermin			ISO	8	123,376,689	123,383,451	RGD:1624291	RGD
G	Fezf2	Fez family zinc finger 2			ISO	15	14,350,796	14,354,585	RGD:1624291	RGD
G	Hprt1	hypoxanthine phosphoribosyltransferase 1			ISO	X	139,929,647	139,961,616	RGD:1624291	RGD
G	Id4	inhibitor of DNA binding 4			ISO	17	22,525,292	22,527,861	RGD:1624291	RGD
G	Id4	inhibitor of DNA binding 4			IEA	17	22,525,292	22,527,861	RGD:1600115	ENSEMBL
G	Lhx6	LIM homeobox 6			ISO	3	15,192,524	15,216,076	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Pafah1b1	platelet-activating factor acetylhydrolase 1b, regulatory subunit 1			IMP	10	61,955,348	62,037,871	RGD:1601501	RGD
G	Pex5	peroxisomal biogenesis factor 5			ISO	4	160,567,258	160,595,985	RGD:1624291	RGD
G	Zfp335	zinc finger protein 335			ISO	3	155,927,554	155,946,834	RGD:1624291	RGD
cerebral cortex radial glia guided migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Gli3	GLI family zinc finger 3			IMP	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3			ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
G	Rtn4	reticulon 4			ISO	14	110,725,089	110,772,578	RGD:1624291	RGD
G	Rtn4	reticulon 4			IEA	14	110,725,089	110,772,578	RGD:1600115	ENSEMBL
G	Rtn4	reticulon 4			ISS	14	110,725,089	110,772,578	RGD:1600115	UniProtKB
cerebral cortex radially oriented cell migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cdk5r1	cyclin-dependent kinase 5, regulatory subunit 1 (p35)			ISO	10	68,715,844	68,717,045	RGD:1624291	RGD
G	Dab1	Dab, reelin signal transducer, homolog 1 (Drosophila)			IMP	5	125,434,133	125,694,562	RGD:2324689	RGD
G	Dab1	Dab, reelin signal transducer, homolog 1 (Drosophila)			ISO	5	125,434,133	125,694,562	RGD:1624291	RGD
G	Disc1	disrupted in schizophrenia 1			ISO	19	55,265,116	55,449,375	RGD:1624291	RGD
G	Disc1	disrupted in schizophrenia 1			IEA	19	55,265,116	55,449,375	RGD:1600115	ENSEMBL
G	Dixdc1	DIX domain containing 1			ISO	8	54,018,179	54,073,235	RGD:1624291	RGD
G	Dixdc1	DIX domain containing 1			IEA	8	54,018,179	54,073,235	RGD:1600115	ENSEMBL
G	Lhx6	LIM homeobox 6			ISO	3	15,192,524	15,216,076	RGD:1624291	RGD
G	Mdga1	MAM domain containing glycosylphosphatidylinositol anchor 1			ISO	20	8,149,686	8,200,149	RGD:1624291	RGD
G	Ndel1	nudE nuclear distribution gene E homolog (A. nidulans)-like 1			ISO	10	55,581,250	55,614,926	RGD:1624291	RGD
G	Ndel1	nudE nuclear distribution gene E homolog (A. nidulans)-like 1			IEA	10	55,581,250	55,614,926	RGD:1600115	ENSEMBL
G	Pou3f2	POU class 3 homeobox 2			ISO	5	37,281,880	37,283,708	RGD:1624291	RGD
G	Pou3f2	POU class 3 homeobox 2			IEA	5	37,281,880	37,283,708	RGD:1600115	ENSEMBL
G	Pou3f3	POU class 3 homeobox 3			ISO	9	41,873,891	41,876,408	RGD:1624291	RGD
G	Pou3f3	POU class 3 homeobox 3			IEA	9	41,873,891	41,876,408	RGD:1600115	ENSEMBL
G	Rac1	ras-related C3 botulinum toxin substrate 1			ISO	12	11,380,314	11,400,531	RGD:1624291	RGD
G	Rac1	ras-related C3 botulinum toxin substrate 1			IEA	12	11,380,314	11,400,531	RGD:1600115	ENSEMBL
cerebral cortex regionalization
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Emx1	empty spiracles homeobox 1			ISO	4	119,420,621	119,436,740	RGD:1624291	RGD
G	Emx1	empty spiracles homeobox 1			IEA	4	119,420,621	119,436,740	RGD:1600115	ENSEMBL
G	Emx2	empty spiracles homeobox 2			ISO	1	266,004,257	266,011,265	RGD:1624291	RGD
G	Emx2	empty spiracles homeobox 2			ISO	1	266,004,257	266,011,265	RGD:1624291	RGD
G	Emx2	empty spiracles homeobox 2			IEA	1	266,004,257	266,011,265	RGD:1600115	ENSEMBL
G	Nr2f1	nuclear receptor subfamily 2, group F, member 1			ISO	2	5,765,399	5,794,104	RGD:1624291	RGD
G	Pax6	paired box 6			ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6			IEA	3	91,127,605	91,149,178	RGD:1600115	ENSEMBL
cerebral cortex tangential migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Arx	aristaless related homeobox			ISO	X	80,631,375	80,643,989	RGD:1624291	RGD
G	Lhx6	LIM homeobox 6			ISO	3	15,192,524	15,216,076	RGD:1624291	RGD
G	Reln	reelin			ISO	4	8,150,873	8,609,141	RGD:1624291	RGD
G	Reln	reelin			IEA	4	8,150,873	8,609,141	RGD:1600115	ENSEMBL
G	Reln	reelin			ISS	4	8,150,873	8,609,141	RGD:1600115	UniProtKB
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Slit1	slit homolog 1 (Drosophila)		NOT	ISO	1	246,813,909	246,964,408	RGD:1624291	RGD
G	Slit2	slit homolog 2 (Drosophila)		NOT	ISO	14	67,546,283	67,891,840	RGD:1624291	RGD
G	Slit3	slit homolog 3 (Drosophila)		NOT	ISO	10	19,983,166	20,576,689	RGD:1624291	RGD
chemorepulsion involved in postnatal olfactory bulb interneuron migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Robo1	roundabout, axon guidance receptor, homolog 1 (Drosophila)			ISO	11	10,784,947	11,720,646	RGD:1624291	RGD
G	Slit2	slit homolog 2 (Drosophila)			ISO	14	67,546,283	67,891,840	RGD:1624291	RGD
commitment of neuronal cell to specific neuron type in forebrain
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Pax6	paired box 6			ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6			IEA	3	91,127,605	91,149,178	RGD:1600115	ENSEMBL
corpus callosum development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cdk5	cyclin-dependent kinase 5			ISO	4	6,119,704	6,124,186	RGD:1624291	RGD
G	Cdk5	cyclin-dependent kinase 5			IEA	4	6,119,704	6,124,186	RGD:1600115	ENSEMBL
G	Ephb2	Eph receptor B2			ISO	5	155,423,035	155,605,384	RGD:1624291	RGD
G	Ephb3	Eph receptor B3			ISO	11	82,027,632	82,046,332	RGD:1624291	RGD
G	Ephb3	Eph receptor B3			IEA	11	82,027,632	82,046,332	RGD:1600115	ENSEMBL
G	Rpgrip1l	Rpgrip1-like			IEA	19	16,859,114	16,952,054	RGD:1600115	ENSEMBL
G	Rpgrip1l	Rpgrip1-like			ISO	19	16,859,114	16,952,054	RGD:1624291	RGD
G	Ryk	receptor-like tyrosine kinase			ISO	8	107,822,823	107,894,331	RGD:1624291	RGD
corpus callosum morphogenesis
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Bhlhe22	basic helix-loop-helix family, member e22			ISO	2	103,086,407	103,089,400	RGD:1624291	RGD
G	Bhlhe22	basic helix-loop-helix family, member e22			IEA	2	103,086,407	103,089,400	RGD:1600115	ENSEMBL
G	Pafah1b1	platelet-activating factor acetylhydrolase 1b, regulatory subunit 1			ISO	10	61,955,348	62,037,871	RGD:1624291	RGD
G	Pafah1b1	platelet-activating factor acetylhydrolase 1b, regulatory subunit 1			IEA	10	61,955,348	62,037,871	RGD:1600115	ENSEMBL
G	Prdm8	PR domain containing 8			IEA	14	12,792,168	12,800,272	RGD:1600115	ENSEMBL
G	Tsku	tsukushi, small leucine rich proteoglycan			IEA	1	155,611,069	155,622,378	RGD:1600115	ENSEMBL
G	Tsku	tsukushi, small leucine rich proteoglycan			ISO	1	155,611,069	155,622,378	RGD:1624291	RGD
corticotropin hormone secreting cell differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Bmp2	bone morphogenetic protein 2			ISO	3	121,372,692	121,381,236	RGD:1624291	RGD
G	Bmp2	bone morphogenetic protein 2			IEA	3	121,372,692	121,381,236	RGD:1600115	ENSEMBL
G	Fgf2	fibroblast growth factor 2			ISO	2	123,893,314	123,947,136	RGD:1624291	RGD
G	Fgf2	fibroblast growth factor 2			IEA	2	123,893,314	123,947,136	RGD:1600115	ENSEMBL
G	Fgf8	fibroblast growth factor 8			ISO	1	250,951,023	250,956,730	RGD:1624291	RGD
G	Fgf8	fibroblast growth factor 8			IEA	1	250,951,023	250,956,730	RGD:1600115	ENSEMBL
dentate gyrus development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Btg2	BTG family, member 2			ISO	13	47,026,986	47,030,745	RGD:1624291	RGD
G	Btg2	BTG family, member 2			IEA	13	47,026,986	47,030,745	RGD:1600115	ENSEMBL
G	Drd1	dopamine receptor D1			ISO	17	16,655,926	16,658,161	RGD:1624291	RGD
G	Drd1	dopamine receptor D1			IEA	17	16,655,926	16,658,161	RGD:1600115	ENSEMBL
G	Emx2	empty spiracles homeobox 2			ISO	1	266,004,257	266,011,265	RGD:1624291	RGD
G	Emx2	empty spiracles homeobox 2			IEA	1	266,004,257	266,011,265	RGD:1600115	ENSEMBL
G	Fezf2	Fez family zinc finger 2			ISO	15	14,350,796	14,354,585	RGD:1624291	RGD
G	Fezf2	Fez family zinc finger 2			IEA	15	14,350,796	14,354,585	RGD:1600115	ENSEMBL
G	Lef1	lymphoid enhancer binding factor 1			ISO	2	228,550,263	228,673,131	RGD:1624291	RGD
G	Lef1	lymphoid enhancer binding factor 1			IEA	2	228,550,263	228,673,131	RGD:1600115	ENSEMBL
G	Lef1	lymphoid enhancer binding factor 1			IBA	2	228,550,263	228,673,131	RGD:1600115	RefGenome
G	Lmx1a	LIM homeobox transcription factor 1 alpha			ISO	13	83,354,523	83,498,511	RGD:1624291	RGD
G	Lmx1a	LIM homeobox transcription factor 1 alpha			IEA	13	83,354,523	83,498,511	RGD:1600115	ENSEMBL
G	Mdk	midkine			IEA	3	76,309,988	76,311,345	RGD:1600115	ENSEMBL
G	Mef2c	myocyte enhancer factor 2C			IEP	2	12,331,078	12,346,520	RGD:5131610	RGD
G	Neurod1	neuronal differentiation 1			ISO	3	62,224,633	62,227,936	RGD:1624291	RGD
G	Neurod1	neuronal differentiation 1			ISO	3	62,224,633	62,227,936	RGD:1624291	RGD
G	Neurod1	neuronal differentiation 1			ISO	3	62,224,633	62,227,936	RGD:1624291	RGD
G	Neurod1	neuronal differentiation 1			ISS	3	62,224,633	62,227,936	RGD:1600115	UniProtKB
G	Neurod6	neuronal differentiation 6			IEA	4	84,476,070	84,479,316	RGD:1600115	ENSEMBL
G	Neurod6	neuronal differentiation 6			ISO	4	84,476,070	84,479,316	RGD:1624291	RGD
G	Prox1	prospero homeobox 1			ISO	13	106,421,541	106,471,350	RGD:1624291	RGD
G	Prox1	prospero homeobox 1			IEA	13	106,421,541	106,471,350	RGD:1600115	ENSEMBL
G	Pten	phosphatase and tensin homolog			ISO	1	236,771,027	236,837,261	RGD:1624291	RGD
G	Pten	phosphatase and tensin homolog			IEA	1	236,771,027	236,837,261	RGD:1600115	ENSEMBL
G	Reln	reelin			IMP	4	8,150,873	8,609,141	RGD:2317799	RGD
G	Sct	secretin			ISO	1	201,472,250	201,472,944	RGD:1624291	RGD
diencephalon development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Six3	SIX homeobox 3			ISO	6	8,981,995	9,019,365	RGD:1624291	RGD
G	Wnt1	wingless-type MMTV integration site family, member 1			IEA	7	137,557,836	137,561,883	RGD:1600115	ENSEMBL
G	Wnt1	wingless-type MMTV integration site family, member 1			ISO	7	137,557,836	137,561,883	RGD:1624291	RGD
diencephalon morphogenesis
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Otx1	orthodenticle homeobox 1			ISO	14	102,721,413	102,724,748	RGD:1624291	RGD
G	Otx2	orthodenticle homeobox 2			IEA	15	24,622,851	24,632,435	RGD:1600115	ENSEMBL
G	Otx2	orthodenticle homeobox 2			ISO	15	24,622,851	24,632,435	RGD:1624291	RGD
G	Sox2	SRY (sex determining region Y)-box 2			ISO	2	120,969,021	120,971,430	RGD:1624291	RGD
G	Sox2	SRY (sex determining region Y)-box 2			IEA	2	120,969,021	120,971,430	RGD:1600115	ENSEMBL
embryonic olfactory bulb interneuron precursor migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Arx	aristaless related homeobox			ISO	X	80,631,375	80,643,989	RGD:1624291	RGD
G	Rac1	ras-related C3 botulinum toxin substrate 1			ISO	12	11,380,314	11,400,531	RGD:1624291	RGD
G	Rac1	ras-related C3 botulinum toxin substrate 1			IEA	12	11,380,314	11,400,531	RGD:1600115	ENSEMBL
extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Srgap2	SLIT-ROBO Rho GTPase activating protein 2			IEA	13	44,239,946	44,452,446	RGD:1600115	ENSEMBL
G	Srgap2	SLIT-ROBO Rho GTPase activating protein 2			ISO	13	44,239,946	44,452,446	RGD:1624291	RGD
G	Srgap2	SLIT-ROBO Rho GTPase activating protein 2			ISS	13	44,239,946	44,452,446	RGD:1600115	UniProtKB
fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Fgfr1	Fibroblast growth factor receptor 1			ISO	16	70,869,974	70,910,045	RGD:1624291	RGD
G	Fgfr1	Fibroblast growth factor receptor 1			IEA	16	70,869,974	70,910,045	RGD:1600115	ENSEMBL
G	Fgfr2	fibroblast growth factor receptor 2			ISO	1	189,482,975	189,589,279	RGD:1624291	RGD
forebrain anterior/posterior pattern specification
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Axin1	axin 1			IBA	10	15,409,373	15,462,726	RGD:1600115	RefGenome
G	Fezf1	Fez family zinc finger 1			ISO	4	49,641,144	49,644,471	RGD:1624291	RGD
G	Fezf1	Fez family zinc finger 1			IEA	4	49,641,144	49,644,471	RGD:1600115	ENSEMBL
G	Fezf2	Fez family zinc finger 2			ISO	15	14,350,796	14,354,585	RGD:1624291	RGD
G	Fezf2	Fez family zinc finger 2			IEA	15	14,350,796	14,354,585	RGD:1600115	ENSEMBL
G	Pax6	paired box 6			ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6			IEA	3	91,127,605	91,149,178	RGD:1600115	ENSEMBL
G	Six3	SIX homeobox 3			ISO	6	8,981,995	9,019,365	RGD:1624291	RGD
G	Wnt1	wingless-type MMTV integration site family, member 1			IEA	7	137,557,836	137,561,883	RGD:1600115	ENSEMBL
G	Wnt1	wingless-type MMTV integration site family, member 1			ISO	7	137,557,836	137,561,883	RGD:1624291	RGD
forebrain cell migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Axl	Axl receptor tyrosine kinase			IGI	1	80,964,751	80,994,300	RGD:2290270	MGI
G	Axl	Axl receptor tyrosine kinase			ISO	1	80,964,751	80,994,300	RGD:1624291	RGD
G	Axl	Axl receptor tyrosine kinase			IEA	1	80,964,751	80,994,300	RGD:1600115	ENSEMBL
G	Emx2	empty spiracles homeobox 2			ISO	1	266,004,257	266,011,265	RGD:1624291	RGD
G	Emx2	empty spiracles homeobox 2			IEA	1	266,004,257	266,011,265	RGD:1600115	ENSEMBL
G	Tyro3	TYRO3 protein tyrosine kinase			ISO	3	106,309,671	106,328,607	RGD:1624291	RGD
G	Tyro3	TYRO3 protein tyrosine kinase			IEA	3	106,309,671	106,328,607	RGD:1600115	ENSEMBL
G	Tyro3	TYRO3 protein tyrosine kinase			ISS	3	106,309,671	106,328,607	RGD:1600115	UniProtKB
forebrain dorsal/ventral pattern formation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Fgf8	fibroblast growth factor 8			ISO	1	250,951,023	250,956,730	RGD:1624291	RGD
G	Fgf8	fibroblast growth factor 8			IEA	1	250,951,023	250,956,730	RGD:1600115	ENSEMBL
G	Gli3	GLI family zinc finger 3			IMP	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3			ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
G	Gsx2	GS homeobox 2			ISO	14	35,489,441	35,491,165	RGD:1624291	RGD
G	Gsx2	GS homeobox 2			ISO	14	35,489,441	35,491,165	RGD:1624291	RGD
G	Gsx2	GS homeobox 2			IEA	14	35,489,441	35,491,165	RGD:1600115	ENSEMBL
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			IEA	6	76,916,943	76,920,133	RGD:1600115	ENSEMBL
G	Pax6	paired box 6			ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6			ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6			IEA	3	91,127,605	91,149,178	RGD:1600115	ENSEMBL
forebrain generation of neurons
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Lrp6	low density lipoprotein receptor-related protein 6			ISO	4	171,337,114	171,444,932	RGD:1624291	RGD
forebrain neuroblast division
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Aspm	asp (abnormal spindle) homolog, microcephaly associated (Drosophila)			ISO	13	52,811,658	52,860,925	RGD:1624291	RGD
G	Aspm	asp (abnormal spindle) homolog, microcephaly associated (Drosophila)			IEA	13	52,811,658	52,860,925	RGD:1600115	ENSEMBL
G	Lef1	lymphoid enhancer binding factor 1			ISO	2	228,550,263	228,673,131	RGD:1624291	RGD
G	Lef1	lymphoid enhancer binding factor 1			IEA	2	228,550,263	228,673,131	RGD:1600115	ENSEMBL
G	Lef1	lymphoid enhancer binding factor 1			IBA	2	228,550,263	228,673,131	RGD:1600115	RefGenome
forebrain neuron development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Fgf8	fibroblast growth factor 8			IMP	1	250,951,023	250,956,730	RGD:2289424	RGD
G	Gbx2	gastrulation brain homeobox 2			ISO	9	89,034,340	89,037,102	RGD:1624291	RGD
G	Gnaq	guanine nucleotide binding protein (G protein), q polypeptide			ISO	1	219,520,998	219,764,401	RGD:1624291	RGD
G	Gnaq	guanine nucleotide binding protein (G protein), q polypeptide			IEA	1	219,520,998	219,764,401	RGD:1600115	ENSEMBL
G	Lhx6	LIM homeobox 6			ISO	3	15,192,524	15,216,076	RGD:1624291	RGD
G	Lhx8	LIM homeobox 8			ISO	2	252,216,608	252,239,112	RGD:1624291	RGD
G	Lhx8	LIM homeobox 8			IEA	2	252,216,608	252,239,112	RGD:1600115	ENSEMBL
G	Tfap2a	transcription factor AP-2 alpha			ISO	17	30,017,580	30,034,852	RGD:1624291	RGD
G	Tfap2a	transcription factor AP-2 alpha			IEA	17	30,017,580	30,034,852	RGD:1600115	ENSEMBL
forebrain neuron differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ascl1	achaete-scute complex homolog 1 (Drosophila)			IDA	7	24,145,578	24,168,494	RGD:2314144	RGD
G	Dlx1	distal-less homeobox 1			ISO	3	53,837,052	53,841,642	RGD:1624291	RGD
G	Dlx2	distal-less homeobox 2			ISO	3	53,852,209	53,854,092	RGD:1624291	RGD
G	Lef1	lymphoid enhancer binding factor 1			IBA	2	228,550,263	228,673,131	RGD:1600115	RefGenome
G	Lhx5	LIM homeobox 5			ISO	12	37,323,820	37,332,257	RGD:1624291	RGD
G	Lhx5	LIM homeobox 5			IEA	12	37,323,820	37,332,257	RGD:1600115	ENSEMBL
G	Lhx8	LIM homeobox 8			ISO	2	252,216,608	252,239,112	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Otp	orthopedia homeobox			ISO	2	25,176,599	25,184,585	RGD:1624291	RGD
G	Otp	orthopedia homeobox			IEA	2	25,176,599	25,184,585	RGD:1600115	ENSEMBL
G	Pou3f4	POU class 3 homeobox 4			ISO	X	99,214,446	99,215,723	RGD:1624291	RGD
G	Pou3f4	POU class 3 homeobox 4			IEA	X	99,214,446	99,215,723	RGD:1600115	ENSEMBL
G	Sox2	SRY (sex determining region Y)-box 2			ISO	2	120,969,021	120,971,430	RGD:1624291	RGD
G	Sox2	SRY (sex determining region Y)-box 2			IEA	2	120,969,021	120,971,430	RGD:1600115	ENSEMBL
forebrain neuron fate commitment
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Lhx6	LIM homeobox 6			ISO	3	15,192,524	15,216,076	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			IEA	6	76,916,943	76,920,133	RGD:1600115	ENSEMBL
G	Tfap2c	transcription factor AP-2 gamma			ISO	3	163,459,283	163,467,166	RGD:1624291	RGD
G	Tfap2c	transcription factor AP-2 gamma			IEA	3	163,459,283	163,467,166	RGD:1600115	ENSEMBL
forebrain radial glial cell differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Gli3	GLI family zinc finger 3			IMP	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3			ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
G	Hes1	hairy and enhancer of split 1 (Drosophila)			IDA	11	72,603,482	72,605,673		UniProtKB
G	Hes5	hairy and enhancer of split 5 (Drosophila)			IDA	5	171,763,869	171,764,636		UniProtKB
G	Lef1	lymphoid enhancer binding factor 1			ISO	2	228,550,263	228,673,131	RGD:1624291	RGD
G	Lef1	lymphoid enhancer binding factor 1			IEA	2	228,550,263	228,673,131	RGD:1600115	ENSEMBL
G	Lef1	lymphoid enhancer binding factor 1			IBA	2	228,550,263	228,673,131	RGD:1600115	RefGenome
G	Lrp6	low density lipoprotein receptor-related protein 6			ISO	4	171,337,114	171,444,932	RGD:1624291	RGD
G	Lrp6	low density lipoprotein receptor-related protein 6			IEA	4	171,337,114	171,444,932	RGD:1600115	ENSEMBL
G	Rhoa	ras homolog family member A			ISO				RGD:1624291	RGD
forebrain regionalization
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Lhx1	LIM homeobox 1			ISO	10	72,800,497	72,805,799	RGD:1624291	RGD
G	Lhx1	LIM homeobox 1			ISS	10	72,800,497	72,805,799	RGD:1600115	UniProtKB
G	Pgap1	post-GPI attachment to proteins 1			ISO	9	53,263,168	53,337,447	RGD:1624291	RGD
G	Pgap1	post-GPI attachment to proteins 1			IEA	9	53,263,168	53,337,447	RGD:1600115	ENSEMBL
G	Wnt2b	wingless-type MMTV integration site family, member 2B			IEA	2	200,218,630	200,233,002	RGD:1600115	ENSEMBL
G	Wnt2b	wingless-type MMTV integration site family, member 2B			ISO	2	200,218,630	200,233,002	RGD:1624291	RGD
G	Wnt7b	wingless-type MMTV integration site family, member 7B			ISO	7	123,533,713	123,554,333	RGD:1624291	RGD
G	Wnt7b	wingless-type MMTV integration site family, member 7B			IEA	7	123,533,713	123,554,333	RGD:1600115	ENSEMBL
forebrain ventricular zone progenitor cell division
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Dixdc1	DIX domain containing 1			ISO	8	54,018,179	54,073,235	RGD:1624291	RGD
G	Dixdc1	DIX domain containing 1			IEA	8	54,018,179	54,073,235	RGD:1600115	ENSEMBL
G	Pou3f2	POU class 3 homeobox 2			ISO	5	37,281,880	37,283,708	RGD:1624291	RGD
G	Pou3f2	POU class 3 homeobox 2			IEA	5	37,281,880	37,283,708	RGD:1600115	ENSEMBL
G	Pou3f3	POU class 3 homeobox 3			ISO	9	41,873,891	41,876,408	RGD:1624291	RGD
G	Pou3f3	POU class 3 homeobox 3			IEA	9	41,873,891	41,876,408	RGD:1600115	ENSEMBL
globus pallidus development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Arx	aristaless related homeobox			ISO	X	80,631,375	80,643,989	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			IEA	6	76,916,943	76,920,133	RGD:1600115	ENSEMBL
habenula development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Nr4a2	nuclear receptor subfamily 4, group A, member 2			ISO	3	38,866,205	38,871,678	RGD:1624291	RGD
G	Nr4a2	nuclear receptor subfamily 4, group A, member 2			IEA	3	38,866,205	38,871,678	RGD:1600115	ENSEMBL
G	Pou4f1	POU class 4 homeobox 1			ISO	15	88,535,625	88,539,256	RGD:1624291	RGD
G	Pou4f1	POU class 4 homeobox 1			IEA	15	88,535,625	88,539,256	RGD:1600115	ENSEMBL
hippocampus development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Acvr1c	activin A receptor, type IC			IEP	3	40,027,228	40,102,303	RGD:631880	RGD
G	Akap5	A kinase (PRKA) anchor protein 5			IEP	6	98,923,105	98,928,505	RGD:2313144	RGD
G	Akr1c14	aldo-keto reductase family 1, member C14			IEP	17	77,316,456	77,332,903	RGD:4145527	RGD
G	Anxa3	annexin A3			IEP	14	14,245,112	14,297,100	RGD:2302825	RGD
G	Atp2b4	ATPase, Ca++ transporting, plasma membrane 4			IEP	13	46,631,205	46,697,214	RGD:6906893	RGD
G	Bbs1	Bardet-Biedl syndrome 1			ISO	1	207,503,399	207,521,683	RGD:1624291	RGD
G	Bbs1	Bardet-Biedl syndrome 1			IEA	1	207,503,399	207,521,683	RGD:1600115	ENSEMBL
G	Bbs2	Bardet-Biedl syndrome 2			ISO	19	11,347,432	11,382,830	RGD:1624291	RGD
G	Bbs2	Bardet-Biedl syndrome 2			IEA	19	11,347,432	11,382,830	RGD:1600115	ENSEMBL
G	Bbs4	Bardet-Biedl syndrome 4			ISO	8	63,153,456	63,189,904	RGD:1624291	RGD
G	Bbs4	Bardet-Biedl syndrome 4			IEA	8	63,153,456	63,189,904	RGD:1600115	ENSEMBL
G	Bcan	brevican			ISO	2	180,067,864	180,080,942	RGD:1624291	RGD
G	Bcan	brevican			IEA	2	180,067,864	180,080,942	RGD:1600115	ENSEMBL
G	Casp3	caspase 3			IEP	16	48,944,226	48,962,420	RGD:2293317	RGD
G	Cdk5	cyclin-dependent kinase 5			ISO	4	6,119,704	6,124,186	RGD:1624291	RGD
G	Cdk5	cyclin-dependent kinase 5			IEA	4	6,119,704	6,124,186	RGD:1600115	ENSEMBL
G	Cdk5r1	cyclin-dependent kinase 5, regulatory subunit 1 (p35)			ISO	10	68,715,844	68,717,045	RGD:1624291	RGD
G	Cdk5r1	cyclin-dependent kinase 5, regulatory subunit 1 (p35)			IEA	10	68,715,844	68,717,045	RGD:1600115	ENSEMBL
G	Cdk5r2	cyclin-dependent kinase 5, regulatory subunit 2 (p39)			ISO	9	74,191,842	74,193,310	RGD:1624291	RGD
G	Cyp11a1	cytochrome P450, family 11, subfamily a, polypeptide 1			IEP	8	61,793,976	61,805,308	RGD:4145527	RGD
G	Cyp17a1	cytochrome P450, family 17, subfamily a, polypeptide 1			IEP	1	251,965,458	251,971,449	RGD:4145527	RGD
G	Cyp19a1	cytochrome P450, family 19, subfamily a, polypeptide 1			IEP				RGD:4145527	RGD
G	Dlx1	distal-less homeobox 1			ISO	3	53,837,052	53,841,642	RGD:1624291	RGD
G	Dlx1	distal-less homeobox 1			IEA	3	53,837,052	53,841,642	RGD:1600115	ENSEMBL
G	Dlx2	distal-less homeobox 2			ISO	3	53,852,209	53,854,092	RGD:1624291	RGD
G	Dlx2	distal-less homeobox 2			IEA	3	53,852,209	53,854,092	RGD:1600115	ENSEMBL
G	Drd1	dopamine receptor D1			ISO	17	16,655,926	16,658,161	RGD:1624291	RGD
G	Epha5	EPH receptor A5			ISO	14	25,524,170	25,896,798	RGD:1624291	RGD
G	Epha5	EPH receptor A5			IEA	14	25,524,170	25,896,798	RGD:1600115	ENSEMBL
G	Epha5	EPH receptor A5			ISS	14	25,524,170	25,896,798	RGD:1600115	UniProtKB
G	Fgf13	fibroblast growth factor 13			ISO	X	144,199,534	144,533,485	RGD:1624291	RGD
G	Fgf13	fibroblast growth factor 13			ISS	X	144,199,534	144,533,485	RGD:1600115	UniProtKB
G	Grin2a	glutamate receptor, ionotropic, N-methyl D-aspartate 2A			IEP	10	5,588,229	6,004,780	RGD:2325978	RGD
G	Grin2b	glutamate receptor, ionotropic, N-methyl D-aspartate 2B			IEP	4	172,721,895	173,183,187	RGD:2325978	RGD
G	Gsk3b	glycogen synthase kinase 3 beta			ISO	11	64,284,731	64,428,698	RGD:1624291	RGD
G	Gsk3b	glycogen synthase kinase 3 beta			IEA	11	64,284,731	64,428,698	RGD:1600115	ENSEMBL
G	Hdac1	histone deacetylase 1			ISO	5	148,672,515	148,699,810	RGD:1624291	RGD
G	Hdac2	histone deacetylase 2			ISO	20	41,162,093	41,186,492	RGD:1624291	RGD
G	Hsd17b3	hydroxysteroid (17-beta) dehydrogenase 3			IEP	17	6,554,164	6,585,525	RGD:4145527	RGD
G	Hsd3b1	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1			IEP	2	193,337,342	193,346,799	RGD:4145527	RGD
G	Hsd3b2	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2			IEP	2	193,500,916	193,507,633	RGD:4145527	RGD
G	Htr5a	5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled			IEP	4	2,707,261	2,716,944	RGD:2316993	RGD
G	Id4	inhibitor of DNA binding 4			ISO	17	22,525,292	22,527,861	RGD:1624291	RGD
G	Id4	inhibitor of DNA binding 4			IEA	17	22,525,292	22,527,861	RGD:1600115	ENSEMBL
G	Lef1	lymphoid enhancer binding factor 1			ISO	2	228,550,263	228,673,131	RGD:1624291	RGD
G	Lhx5	LIM homeobox 5			ISO	12	37,323,820	37,332,257	RGD:1624291	RGD
G	Lhx5	LIM homeobox 5			IEA	12	37,323,820	37,332,257	RGD:1600115	ENSEMBL
G	Lmx1a	LIM homeobox transcription factor 1 alpha			ISO	13	83,354,523	83,498,511	RGD:1624291	RGD
G	LOC100910284	brevican core protein-like			IEA				RGD:1600115	ENSEMBL
G	Lrp8	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor			ISO	5	128,905,612	128,975,702	RGD:1624291	RGD
G	Lrp8	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor			IEA	5	128,905,612	128,975,702	RGD:1600115	ENSEMBL
G	Mas1	MAS1 oncogene			IEP	1	42,154,786	42,185,750	RGD:2316795	RGD
G	Mdk	midkine			ISO	3	76,309,988	76,311,345	RGD:1624291	RGD
G	Mkks	McKusick-Kaufman syndrome			ISO	3	124,975,099	124,993,345	RGD:1624291	RGD
G	Mkks	McKusick-Kaufman syndrome			IEA	3	124,975,099	124,993,345	RGD:1600115	ENSEMBL
G	Ncoa1	nuclear receptor coactivator 1			IEP	6	27,224,396	27,473,926	RGD:5688137	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			IEA	6	76,916,943	76,920,133	RGD:1600115	ENSEMBL
G	Nme1	NME/NM23 nucleoside diphosphate kinase 1			IEP	10	82,591,705	82,601,075	RGD:2302825	RGD
G	Nr4a3	nuclear receptor subfamily 4, group A, member 3			ISO	5	64,713,468	64,753,311	RGD:1624291	RGD
G	Nr4a3	nuclear receptor subfamily 4, group A, member 3			IEA	5	64,713,468	64,753,311	RGD:1600115	ENSEMBL
G	Ogdh	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)			IEA	14	87,022,994	87,090,768	RGD:1600115	ENSEMBL
G	Pafah1b1	platelet-activating factor acetylhydrolase 1b, regulatory subunit 1			ISO	10	61,955,348	62,037,871	RGD:1624291	RGD
G	Pafah1b1	platelet-activating factor acetylhydrolase 1b, regulatory subunit 1			ISO	10	61,955,348	62,037,871	RGD:1624291	RGD
G	Pafah1b1	platelet-activating factor acetylhydrolase 1b, regulatory subunit 1			IEA	10	61,955,348	62,037,871	RGD:1600115	ENSEMBL
G	Plxna3	plexin A3			ISO	X	160,261,781	160,277,570	RGD:1624291	RGD
G	Plxna3	plexin A3			IEA	X	160,261,781	160,277,570	RGD:1600115	ENSEMBL
G	Rara	retinoic acid receptor, alpha			IEP	10	87,740,479	87,753,265	RGD:2314288	RGD
G	Reln	reelin			ISO	4	8,150,873	8,609,141	RGD:1624291	RGD
G	Reln	reelin			IEA	4	8,150,873	8,609,141	RGD:1600115	ENSEMBL
G	Srd5a1	steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)			IEP	17	3,845,190	3,879,165	RGD:4892048	RGD
G	Srd5a2	steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)			IEP	6	21,453,521	21,489,408	RGD:4145527	RGD
G	Srf	serum response factor (c-fos serum response element-binding transcription factor)			ISO	9	9,788,378	9,797,639	RGD:1624291	RGD
G	Tp73	tumor protein p73			ISO	5	170,848,979	171,078,739	RGD:1624291	RGD
G	Tp73	tumor protein p73			IEA	5	170,848,979	171,078,739	RGD:1600115	ENSEMBL
G	Tsc1	tuberous sclerosis 1			ISO	3	7,645,313	7,672,944	RGD:1624291	RGD
G	Tsc1	tuberous sclerosis 1			IEA	3	7,645,313	7,672,944	RGD:1600115	ENSEMBL
G	Uqcrq	ubiquinol-cytochrome c reductase, complex III subunit VII			IEA	10	38,889,265	38,892,552	RGD:1600115	ENSEMBL
G	Wnt3a	wingless-type MMTV integration site family, member 3A			ISO	10	45,553,682	45,594,983	RGD:1624291	RGD
G	Xrcc1	X-ray repair complementing defective repair in Chinese hamster cells 1			ISO	1	79,834,167	79,860,300	RGD:1624291	RGD
G	Xrcc1	X-ray repair complementing defective repair in Chinese hamster cells 1			IEA	1	79,834,167	79,860,300	RGD:1600115	ENSEMBL
G	Ywhae	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide			ISO	10	63,072,128	63,109,833	RGD:1624291	RGD
G	Ywhae	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide			IEA	10	63,072,128	63,109,833	RGD:1600115	ENSEMBL
G	Zeb2	zinc finger E-box binding homeobox 2			ISO	3	25,513,009	25,654,964	RGD:1624291	RGD
G	Zeb2	zinc finger E-box binding homeobox 2			IEA	3	25,513,009	25,654,964	RGD:1600115	ENSEMBL
G	Zfp238	zinc finger protein 238			IEA	13	93,345,905	93,347,473	RGD:1600115	ENSEMBL
G	Zfp238	zinc finger protein 238			ISO	13	93,345,905	93,347,473	RGD:1624291	RGD
hypophysis morphogenesis
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Prop1	PROP paired-like homeobox 1			ISO	10	36,527,112	36,529,573	RGD:1624291	RGD
G	Prop1	PROP paired-like homeobox 1			IEA	10	36,527,112	36,529,573	RGD:1600115	ENSEMBL
G	Wnt5a	wingless-type MMTV integration site family, member 5A			ISO	16	3,782,025	3,799,625	RGD:1624291	RGD
G	Wnt5a	wingless-type MMTV integration site family, member 5A			IEA	16	3,782,025	3,799,625	RGD:1600115	ENSEMBL
hypothalamus cell differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Otp	orthopedia homeobox			ISO	2	25,176,599	25,184,585	RGD:1624291	RGD
G	Otp	orthopedia homeobox			IEA	2	25,176,599	25,184,585	RGD:1600115	ENSEMBL
G	Pou3f2	POU class 3 homeobox 2			ISO	5	37,281,880	37,283,708	RGD:1624291	RGD
G	Pou3f2	POU class 3 homeobox 2			IEA	5	37,281,880	37,283,708	RGD:1600115	ENSEMBL
G	Prop1	PROP paired-like homeobox 1			ISO	10	36,527,112	36,529,573	RGD:1624291	RGD
G	Prop1	PROP paired-like homeobox 1			IEA	10	36,527,112	36,529,573	RGD:1600115	ENSEMBL
hypothalamus cell migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Foxb1	forkhead box B1			ISS	8	74,200,271	74,202,891	RGD:1600115	UniProtKB
G	Pitx2	paired-like homeodomain 2			ISO	2	226,581,170	226,601,319	RGD:1624291	RGD
hypothalamus development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Bax	Bcl2-associated X protein			ISO	1	95,933,023	95,938,176	RGD:1624291	RGD
G	Bax	Bcl2-associated X protein			IEA	1	95,933,023	95,938,176	RGD:1600115	ENSEMBL
G	Crh	corticotropin releasing hormone			IEP	2	104,764,023	104,765,887	RGD:5130950	RGD
G	Crhr1	corticotropin releasing hormone receptor 1			IEP	10	93,312,405	93,354,229	RGD:5130950	RGD
G	Crhr2	corticotropin releasing hormone receptor 2			IEP	4	83,839,822	83,867,017	RGD:5130950	RGD
G	Cyp19a1	cytochrome P450, family 19, subfamily a, polypeptide 1			IEP				RGD:4891928	RGD
G	Ets1	v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)			IEP	8	32,481,694	32,545,237	RGD:2313681	RGD
G	Gsx1	GS homeobox 1			ISO	12	8,551,150	8,552,445	RGD:1624291	RGD
G	Gsx1	GS homeobox 1			IEA	12	8,551,150	8,552,445	RGD:1600115	ENSEMBL
G	Lef1	lymphoid enhancer binding factor 1			IBA	2	228,550,263	228,673,131	RGD:1600115	RefGenome
G	Myc	myelocytomatosis oncogene			IEP	7	98,953,142	98,958,060	RGD:7207858	RGD
G	Ncoa1	nuclear receptor coactivator 1			IEP	6	27,224,396	27,473,926	RGD:5688241	RGD
G	Nkx2-6	NK2 homeobox 6			IEA	15	49,712,260	49,716,355	RGD:1600115	ENSEMBL
G	Rax	retina and anterior neural fold homeobox			ISO	18	62,567,485	62,571,191	RGD:1624291	RGD
G	Rax	retina and anterior neural fold homeobox			IEA	18	62,567,485	62,571,191	RGD:1600115	ENSEMBL
G	Reln	reelin			IEP	4	8,150,873	8,609,141	RGD:634730	RGD
G	Srd5a1	steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)			IEP	17	3,845,190	3,879,165	RGD:4892048	RGD
G	Srd5a1	steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)			IEP	17	3,845,190	3,879,165	RGD:4891928	RGD
G	Srd5a2	steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)			IEP	6	21,453,521	21,489,408	RGD:4891928	RGD
G	Uqcrq	ubiquinol-cytochrome c reductase, complex III subunit VII			IEA	10	38,889,265	38,892,552	RGD:1600115	ENSEMBL
hypothalamus gonadotrophin-releasing hormone neuron development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	LOC100360645	ubiquitin B-like			IEA	10	49,427,809	49,428,190	RGD:1600115	ENSEMBL
G	Ubb	ubiquitin B			ISO	10	139,578,694	139,579,068	RGD:1624291	RGD
G	Ubc	ubiquitin C			IEA	12	32,333,211	32,337,944	RGD:1600115	ENSEMBL
interkinetic nuclear migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cep120	centrosomal protein 120			ISO	18	49,192,432	49,255,022	RGD:1624291	RGD
G	Cep120	centrosomal protein 120			IEA	18	49,192,432	49,255,022	RGD:1600115	ENSEMBL
G	Hhex	hematopoietically expressed homeobox			ISO	1	241,736,542	241,742,129	RGD:1624291	RGD
G	Hhex	hematopoietically expressed homeobox			IEA	1	241,736,542	241,742,129	RGD:1600115	ENSEMBL
G	Hook3	hook homolog 3 (Drosophila)			ISO	16	70,338,144	70,424,173	RGD:1624291	RGD
G	Hook3	hook homolog 3 (Drosophila)			IEA	16	70,338,144	70,424,173	RGD:1600115	ENSEMBL
G	Pcm1	pericentriolar material 1			ISO	16	54,321,572	54,419,178	RGD:1624291	RGD
G	Pcm1	pericentriolar material 1			IEA	16	54,321,572	54,419,178	RGD:1600115	ENSEMBL
G	Tacc1	transforming, acidic coiled-coil containing protein 1			ISO	16	71,241,785	71,304,959	RGD:1624291	RGD
G	Tacc1	transforming, acidic coiled-coil containing protein 1			IEA	16	71,241,785	71,304,959	RGD:1600115	ENSEMBL
G	Tacc2	transforming, acidic coiled-coil containing protein 2			ISO	1	189,894,937	190,085,789	RGD:1624291	RGD
G	Tacc2	transforming, acidic coiled-coil containing protein 2			IEA	1	189,894,937	190,085,789	RGD:1600115	ENSEMBL
G	Tacc3	transforming, acidic coiled-coil containing protein 3			ISO	14	82,746,460	82,760,864	RGD:1624291	RGD
lateral ganglionic eminence cell proliferation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Gli3	GLI family zinc finger 3			IMP	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3			ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
lateral geniculate nucleus development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Chrnb2	cholinergic receptor, nicotinic, beta 2 (neuronal)			ISO	2	181,961,373	181,969,581	RGD:1624291	RGD
G	Chrnb2	cholinergic receptor, nicotinic, beta 2 (neuronal)			IEA	2	181,961,373	181,969,581	RGD:1600115	ENSEMBL
lateral ventricle development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Aqp1	aquaporin 1			ISO	4	84,098,346	84,110,524	RGD:1624291	RGD
G	Aqp1	aquaporin 1			IEP	4	84,098,346	84,110,524		UniProtKB
G	Dpcd	deleted in primary ciliary dyskinesia			ISO	1	250,726,987	250,746,864	RGD:1624291	RGD
G	Dpcd	deleted in primary ciliary dyskinesia			IEA	1	250,726,987	250,746,864	RGD:1600115	ENSEMBL
G	Kdm2b	lysine (K)-specific demethylase 2B			ISO	12	34,672,334	34,802,802	RGD:1624291	RGD
G	Myh10	myosin, heavy chain 10, non-muscle			ISO	10	55,445,288	55,576,096	RGD:1624291	RGD
G	Myh10	myosin, heavy chain 10, non-muscle			ISO	10	55,445,288	55,576,096	RGD:1624291	RGD
G	Myh10	myosin, heavy chain 10, non-muscle			ISO	10	55,445,288	55,576,096	RGD:1624291	RGD
G	Myh10	myosin, heavy chain 10, non-muscle			IEA	10	55,445,288	55,576,096	RGD:1600115	ENSEMBL
G	Numb	numb homolog (Drosophila)			ISO	6	107,838,216	107,882,302	RGD:1624291	RGD
G	Numbl	numb homolog (Drosophila)-like			ISS	1	82,333,804	82,356,657	RGD:1600115	UniProtKB
G	Numbl	numb homolog (Drosophila)-like			ISO	1	82,333,804	82,356,657	RGD:1624291	RGD
G	Rpgrip1l	Rpgrip1-like			IEA	19	16,859,114	16,952,054	RGD:1600115	ENSEMBL
G	Rpgrip1l	Rpgrip1-like			ISO	19	16,859,114	16,952,054	RGD:1624291	RGD
G	Tsku	tsukushi, small leucine rich proteoglycan			IEA	1	155,611,069	155,622,378	RGD:1600115	ENSEMBL
G	Tsku	tsukushi, small leucine rich proteoglycan			ISO	1	155,611,069	155,622,378	RGD:1624291	RGD
G	Uchl5	ubiquitin carboxyl-terminal hydrolase L5			ISO	13	57,605,912	57,643,050	RGD:1624291	RGD
G	Uchl5	ubiquitin carboxyl-terminal hydrolase L5			IEA	13	57,605,912	57,643,050	RGD:1600115	ENSEMBL
layer formation in cerebral cortex
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cdk5	cyclin-dependent kinase 5			ISO	4	6,119,704	6,124,186	RGD:1624291	RGD
G	Cdk5	cyclin-dependent kinase 5			IEA	4	6,119,704	6,124,186	RGD:1600115	ENSEMBL
G	Cdk5r1	cyclin-dependent kinase 5, regulatory subunit 1 (p35)			ISO	10	68,715,844	68,717,045	RGD:1624291	RGD
G	Cdk5r1	cyclin-dependent kinase 5, regulatory subunit 1 (p35)			IEA	10	68,715,844	68,717,045	RGD:1600115	ENSEMBL
G	Cdk5r2	cyclin-dependent kinase 5, regulatory subunit 2 (p39)			ISO	9	74,191,842	74,193,310	RGD:1624291	RGD
G	Dab2ip	DAB2 interacting protein			ISS	3	14,667,700	14,840,625	RGD:1600115	UniProtKB
G	Dab2ip	DAB2 interacting protein			ISO	3	14,667,700	14,840,625	RGD:1624291	RGD
G	Lrp8	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor			ISO	5	128,905,612	128,975,702	RGD:1624291	RGD
G	Lrp8	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor			IEA	5	128,905,612	128,975,702	RGD:1600115	ENSEMBL
G	Pafah1b1	platelet-activating factor acetylhydrolase 1b, regulatory subunit 1			ISO	10	61,955,348	62,037,871	RGD:1624291	RGD
G	Pafah1b1	platelet-activating factor acetylhydrolase 1b, regulatory subunit 1			IEA	10	61,955,348	62,037,871	RGD:1600115	ENSEMBL
limbic system development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cntnap2	contactin associated protein-like 2			ISO	4	74,277,978	75,440,178	RGD:1624291	RGD
G	Tbx3	T-box 3			ISO	12	38,155,494	38,166,670	RGD:1624291	RGD
G	Tbx3	T-box 3			IEA	12	38,155,494	38,166,670	RGD:1600115	ENSEMBL
mammillary body development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Foxb1	forkhead box B1			ISS	8	74,200,271	74,202,891	RGD:1600115	UniProtKB
mammillothalamic axonal tract development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Foxb1	forkhead box B1			ISS	8	74,200,271	74,202,891	RGD:1600115	UniProtKB
motogenic signaling involved in postnatal olfactory bulb interneuron migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Fgfr1	Fibroblast growth factor receptor 1			IMP	16	70,869,974	70,910,045	RGD:2325172	RGD
negative regulation of forebrain neuron differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Hes1	hairy and enhancer of split 1 (Drosophila)			IDA	11	72,603,482	72,605,673		UniProtKB
G	Hes5	hairy and enhancer of split 5 (Drosophila)			IDA	5	171,763,869	171,764,636		UniProtKB
neuroblast division in subventricular zone
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Numb	numb homolog (Drosophila)			ISO	6	107,838,216	107,882,302	RGD:1624291	RGD
G	Numbl	numb homolog (Drosophila)-like			ISS	1	82,333,804	82,356,657	RGD:1600115	UniProtKB
G	Numbl	numb homolog (Drosophila)-like			ISO	1	82,333,804	82,356,657	RGD:1624291	RGD
neurohypophysis development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Otp	orthopedia homeobox			ISO	2	25,176,599	25,184,585	RGD:1624291	RGD
G	Otp	orthopedia homeobox			IEA	2	25,176,599	25,184,585	RGD:1600115	ENSEMBL
G	Pou3f2	POU class 3 homeobox 2			ISO	5	37,281,880	37,283,708	RGD:1624291	RGD
G	Pou3f2	POU class 3 homeobox 2			IEA	5	37,281,880	37,283,708	RGD:1600115	ENSEMBL
nucleus accumbens development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Aldh1a3	aldehyde dehydrogenase 1 family, member A3			ISO	1	120,847,746	120,881,883	RGD:1624291	RGD
G	Aldh1a3	aldehyde dehydrogenase 1 family, member A3			IEA	1	120,847,746	120,881,883	RGD:1600115	ENSEMBL
olfactory bulb development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Agtpbp1	ATP/GTP binding protein 1			ISO	17	11,040,339	11,155,923	RGD:1624291	RGD
G	Agtpbp1	ATP/GTP binding protein 1			IEA	17	11,040,339	11,155,923	RGD:1600115	ENSEMBL
G	Ak1	adenylate kinase 1			IEP	2	19,821,482	19,822,544	RGD:632499	RGD
G	Ak3	adenylate kinase 3			IEP	1	232,658,879	232,684,083	RGD:632499	RGD
G	Arx	aristaless related homeobox			ISO	X	80,631,375	80,643,989	RGD:1624291	RGD
G	Dlx2	distal-less homeobox 2			ISO	3	53,852,209	53,854,092	RGD:1624291	RGD
G	Dlx2	distal-less homeobox 2			IEA	3	53,852,209	53,854,092	RGD:1600115	ENSEMBL
G	Dpysl2	dihydropyrimidinase-like 2			IEP	15	46,346,413	46,413,786	RGD:2316247	RGD
G	Efna2	ephrin A2			IEP	7	11,028,432	11,039,064	RGD:634733	RGD
G	Eomes	eomesodermin			ISO	8	123,376,689	123,383,451	RGD:1624291	RGD
G	Ext1	exostosin glycosyltransferase 1			ISO	7	89,392,837	89,671,523	RGD:1624291	RGD
G	Ext1	exostosin glycosyltransferase 1			IEA	7	89,392,837	89,671,523	RGD:1600115	ENSEMBL
G	Fezf1	Fez family zinc finger 1			ISO	4	49,641,144	49,644,471	RGD:1624291	RGD
G	Fezf1	Fez family zinc finger 1			IEA	4	49,641,144	49,644,471	RGD:1600115	ENSEMBL
G	Gad1	glutamate decarboxylase 1			ISO	3	52,789,370	52,830,038	RGD:1624291	RGD
G	Id2	inhibitor of DNA binding 2			ISO	6	42,781,476	42,783,307	RGD:1624291	RGD
G	Id2	inhibitor of DNA binding 2			IEA	6	42,781,476	42,783,307	RGD:1600115	ENSEMBL
G	Lhx2	LIM homeobox 2			ISO	3	18,129,455	18,147,357	RGD:1624291	RGD
G	Lrrk2	leucine-rich repeat kinase 2			ISO	7	130,105,902	130,267,747	RGD:1624291	RGD
G	Pcnt	pericentrin			ISO	20	12,608,650	12,694,390	RGD:1624291	RGD
G	Rpgrip1l	Rpgrip1-like			IEA	19	16,859,114	16,952,054	RGD:1600115	ENSEMBL
G	Rpgrip1l	Rpgrip1-like			ISO	19	16,859,114	16,952,054	RGD:1624291	RGD
G	Sall1	sal-like 1 (Drosophila)			ISO	19	19,277,337	19,293,298	RGD:1624291	RGD
G	Sema3a	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A			ISS	4	17,575,112	17,790,100	RGD:1600115	UniProtKB
G	Sema3a	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A			ISO	4	17,575,112	17,790,100	RGD:1624291	RGD
G	Slit1	slit homolog 1 (Drosophila)			ISO	1	246,813,909	246,964,408	RGD:1624291	RGD
G	Slit2	slit homolog 2 (Drosophila)			ISO	14	67,546,283	67,891,840	RGD:1624291	RGD
G	Ttc8	tetratricopeptide repeat domain 8			ISO	6	123,117,534	123,171,840	RGD:1624291	RGD
olfactory bulb interneuron development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Atf5	activating transcription factor 5			ISO	1	95,284,505	95,286,786	RGD:1624291	RGD
G	Robo1	roundabout, axon guidance receptor, homolog 1 (Drosophila)			ISO	11	10,784,947	11,720,646	RGD:1624291	RGD
G	Robo2	roundabout homolog 2 (Drosophila)			ISO	11	12,662,391	13,174,865	RGD:1624291	RGD
G	Sall3	sal-like 3 (Drosophila)			ISO	18	77,852,386	77,858,653	RGD:1624291	RGD
G	Sall3	sal-like 3 (Drosophila)			IEA	18	77,852,386	77,858,653	RGD:1600115	ENSEMBL
G	Wnt5a	wingless-type MMTV integration site family, member 5A			ISO	16	3,782,025	3,799,625	RGD:1624291	RGD
G	Wnt5a	wingless-type MMTV integration site family, member 5A			IEA	16	3,782,025	3,799,625	RGD:1600115	ENSEMBL
olfactory bulb interneuron differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Atf5	activating transcription factor 5			ISO	1	95,284,505	95,286,786	RGD:1624291	RGD
G	Dicer1	dicer 1, ribonuclease type III			ISO	6	128,777,468	128,838,780	RGD:1624291	RGD
G	Dicer1	dicer 1, ribonuclease type III			IEA	6	128,777,468	128,838,780	RGD:1600115	ENSEMBL
G	Erbb4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)			ISO	9	66,843,898	67,967,970	RGD:1624291	RGD
G	Erbb4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)			ISS	9	66,843,898	67,967,970	RGD:1600115	UniProtKB
G	Gsx2	GS homeobox 2			ISO	14	35,489,441	35,491,165	RGD:1624291	RGD
G	Gsx2	GS homeobox 2			IEA	14	35,489,441	35,491,165	RGD:1600115	ENSEMBL
G	Sall1	sal-like 1 (Drosophila)			ISO	19	19,277,337	19,293,298	RGD:1624291	RGD
G	Uncx	UNC homeobox			IEA	12	15,576,541	15,581,062	RGD:1600115	ENSEMBL
G	Uncx	UNC homeobox			ISO	12	15,576,541	15,581,062	RGD:1624291	RGD
olfactory bulb mitral cell layer development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ogdh	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)			IEA	14	87,022,994	87,090,768	RGD:1600115	ENSEMBL
G	Sall1	sal-like 1 (Drosophila)			IEA	19	19,277,337	19,293,298	RGD:1600115	ENSEMBL
G	Sall1	sal-like 1 (Drosophila)			ISO	19	19,277,337	19,293,298	RGD:1624291	RGD
olfactory lobe development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Atf5	activating transcription factor 5			ISO	1	95,284,505	95,286,786	RGD:1624291	RGD
G	Htt	huntingtin			ISO	14	81,490,322	81,636,856	RGD:1624291	RGD
G	Htt	huntingtin			IEA	14	81,490,322	81,636,856	RGD:1600115	ENSEMBL
orbitofrontal cortex development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Fgfr1	Fibroblast growth factor receptor 1			ISO	16	70,869,974	70,910,045	RGD:1624291	RGD
G	Fgfr2	fibroblast growth factor receptor 2			ISO	1	189,482,975	189,589,279	RGD:1624291	RGD
G	Reln	reelin			IEP	4	8,150,873	8,609,141	RGD:2317761	RGD
pallium development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Fgf8	fibroblast growth factor 8			ISO	1	250,951,023	250,956,730	RGD:1624291	RGD
G	Fgf8	fibroblast growth factor 8			IEA	1	250,951,023	250,956,730	RGD:1600115	ENSEMBL
G	Gli3	GLI family zinc finger 3			IMP	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3			ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
G	Pax6	paired box 6			ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
pituitary gland development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Adcyap1	adenylate cyclase activating polypeptide 1			IEP				RGD:2325274	RGD
G	Aldh1a2	aldehyde dehydrogenase 1 family, member A2			IEP	8	75,692,099	75,771,159	RGD:2306413	RGD
G	Aldh1a3	aldehyde dehydrogenase 1 family, member A3			IEP	1	120,847,746	120,881,883	RGD:2306413	RGD
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			IEA	15	22,283,171	22,286,757	RGD:1600115	ENSEMBL
G	Bmpr1a	bone morphogenetic protein receptor, type IA			ISO	16	10,061,943	10,105,854	RGD:1624291	RGD
G	Bmpr1a	bone morphogenetic protein receptor, type IA			IEA	16	10,061,943	10,105,854	RGD:1600115	ENSEMBL
G	Cdh1	cadherin 1			IEP	19	36,442,693	36,512,091	RGD:2289637	RGD
G	Creb1	cAMP responsive element binding protein 1			ISO	9	63,170,785	63,234,727	RGD:1624291	RGD
G	Ets1	v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)			IEP	8	32,481,694	32,545,237	RGD:2313681	RGD
G	Fgf10	fibroblast growth factor 10			ISO	2	50,866,799	50,940,319	RGD:1624291	RGD
G	Fgf10	fibroblast growth factor 10			IEA	2	50,866,799	50,940,319	RGD:1600115	ENSEMBL
G	Gata2	GATA binding protein 2			ISO	4	122,279,753	122,288,528	RGD:1624291	RGD
G	Gata2	GATA binding protein 2			IEA	4	122,279,753	122,288,528	RGD:1600115	ENSEMBL
G	Gli1	GLI family zinc finger 1			ISO	7	67,288,291	67,297,461	RGD:1624291	RGD
G	Gli1	GLI family zinc finger 1			IEA	7	67,288,291	67,297,461	RGD:1600115	ENSEMBL
G	Gli2	GLI family zinc finger 2			ISO	13	31,551,089	31,607,264	RGD:1624291	RGD
G	Gli2	GLI family zinc finger 2			IEA	13	31,551,089	31,607,264	RGD:1600115	ENSEMBL
G	Hes1	hairy and enhancer of split 1 (Drosophila)			ISO	11	72,603,482	72,605,673	RGD:1624291	RGD
G	Hes1	hairy and enhancer of split 1 (Drosophila)			ISO	11	72,603,482	72,605,673	RGD:1624291	RGD
G	Hmga2	high mobility group AT-hook 2			ISO	7	59,638,555	59,753,791	RGD:1624291	RGD
G	Hmga2	high mobility group AT-hook 2			IEA	7	59,638,555	59,753,791	RGD:1600115	ENSEMBL
G	Isl1	ISL LIM homeobox 1			ISO	2	48,050,124	48,060,394	RGD:1624291	RGD
G	Isl1	ISL LIM homeobox 1			IEA	2	48,050,124	48,060,394	RGD:1600115	ENSEMBL
G	Kdm1a	lysine (K)-specific demethylase 1A			ISO	5	155,299,289	155,358,404	RGD:1624291	RGD
G	Kdm1a	lysine (K)-specific demethylase 1A			IEA	5	155,299,289	155,358,404	RGD:1600115	ENSEMBL
G	Lhx3	LIM homeobox 3			ISO	3	4,381,890	4,389,132	RGD:1624291	RGD
G	Lhx3	LIM homeobox 3			IEA	3	4,381,890	4,389,132	RGD:1600115	ENSEMBL
G	Msx1	msh homeobox 1			IEP	14	78,257,345	78,261,144	RGD:5132608	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			IEA	6	76,916,943	76,920,133	RGD:1600115	ENSEMBL
G	Nog	noggin			ISO	10	77,689,244	77,690,871	RGD:1624291	RGD
G	Nog	noggin			IEA	10	77,689,244	77,690,871	RGD:1600115	ENSEMBL
G	Pax6	paired box 6			ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6			IEA	3	91,127,605	91,149,178	RGD:1600115	ENSEMBL
G	Pcsk1	proprotein convertase subtilisin/kexin type 1			IEP	2	1,923,309	1,970,238	RGD:2308902	RGD
G	Pitx1	paired-like homeodomain 1			ISO	17	14,834,144	14,840,303	RGD:1624291	RGD
G	Pitx1	paired-like homeodomain 1			IEA	17	14,834,144	14,840,303	RGD:1600115	ENSEMBL
G	Pitx2	paired-like homeodomain 2			ISO	2	226,581,170	226,601,319	RGD:1624291	RGD
G	Pitx2	paired-like homeodomain 2			ISO	2	226,581,170	226,601,319	RGD:1624291	RGD
G	Pou1f1	POU class 1 homeobox 1			ISO	11	2,959,383	2,980,545	RGD:1624291	RGD
G	Rbpj	recombination signal binding protein for immunoglobulin kappa J region			ISO				RGD:1624291	RGD
G	Sall1	sal-like 1 (Drosophila)			IEA	19	19,277,337	19,293,298	RGD:1600115	ENSEMBL
G	Sall1	sal-like 1 (Drosophila)			ISO	19	19,277,337	19,293,298	RGD:1624291	RGD
G	Sox2	SRY (sex determining region Y)-box 2			ISO	2	120,969,021	120,971,430	RGD:1624291	RGD
G	Srd5a1	steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)			IEP	17	3,845,190	3,879,165	RGD:4892048	RGD
G	Tbx19	T-box 19			IEA	13	80,890,762	80,913,604	RGD:1600115	ENSEMBL
G	Tbx19	T-box 19			ISO	13	80,890,762	80,913,604	RGD:1624291	RGD
G	Tcf7l2	transcription factor 7-like 2 (T-cell specific, HMG-box)			ISO	1	262,031,823	262,226,710	RGD:1624291	RGD
positive regulation of forebrain neuron differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Prox1	prospero homeobox 1			ISO	13	106,421,541	106,471,350	RGD:1624291	RGD
G	Prox1	prospero homeobox 1			IEA	13	106,421,541	106,471,350	RGD:1600115	ENSEMBL
putamen development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Foxp2	forkhead box P2			ISO	4	40,719,812	40,977,517	RGD:1624291	RGD
G	Foxp2	forkhead box P2			IEA	4	40,719,812	40,977,517	RGD:1600115	ENSEMBL
G	Foxp2	forkhead box P2			IBA	4	40,719,812	40,977,517	RGD:1600115	RefGenome
G	Foxp3	forkhead box P3			IRD	X	26,950,006	26,965,329	RGD:1600115	RefGenome
pyramidal neuron development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Atg7	autophagy related 7			ISO	4	150,814,706	150,992,704	RGD:1624291	RGD
G	Atg7	autophagy related 7			IEA	4	150,814,706	150,992,704	RGD:1600115	ENSEMBL
G	Atp7a	ATPase, Cu++ transporting, alpha polypeptide			ISO	X	94,192,540	94,249,776	RGD:1624291	RGD
G	Atp7a	ATPase, Cu++ transporting, alpha polypeptide			IEA	X	94,192,540	94,249,776	RGD:1600115	ENSEMBL
G	Fgfr2	fibroblast growth factor receptor 2			ISO	1	189,482,975	189,589,279	RGD:1624291	RGD
G	Ogdh	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)			IEA	14	87,022,994	87,090,768	RGD:1600115	ENSEMBL
G	Plxna3	plexin A3			ISO	X	160,261,781	160,277,570	RGD:1624291	RGD
G	Plxna3	plexin A3			IEA	X	160,261,781	160,277,570	RGD:1600115	ENSEMBL
G	Uqcrq	ubiquinol-cytochrome c reductase, complex III subunit VII			IEA	10	38,889,265	38,892,552	RGD:1600115	ENSEMBL
pyramidal neuron migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Disc1	disrupted in schizophrenia 1			IMP	19	55,265,116	55,449,375	RGD:5509783	RGD
G	Foxg1	forkhead box G1			ISO	6	69,217,672	69,220,482	RGD:1624291	RGD
regulation of timing of subpallium neuron differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ascl1	achaete-scute complex homolog 1 (Drosophila)			ISO	7	24,145,578	24,168,494	RGD:1624291	RGD
G	Ascl1	achaete-scute complex homolog 1 (Drosophila)			IEA	7	24,145,578	24,168,494	RGD:1600115	ENSEMBL
regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Dlx1	distal-less homeobox 1			ISO	3	53,837,052	53,841,642	RGD:1624291	RGD
G	Dlx1	distal-less homeobox 1			IEA	3	53,837,052	53,841,642	RGD:1600115	ENSEMBL
G	Dlx2	distal-less homeobox 2			ISO	3	53,852,209	53,854,092	RGD:1624291	RGD
G	Dlx2	distal-less homeobox 2			IEA	3	53,852,209	53,854,092	RGD:1600115	ENSEMBL
somatotropin secreting cell development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ghrhr	growth hormone releasing hormone receptor			ISO	4	84,135,530	84,148,503	RGD:1624291	RGD
G	Ghrhr	growth hormone releasing hormone receptor			ISO	4	84,135,530	84,148,503	RGD:1624291	RGD
G	Ghrhr	growth hormone releasing hormone receptor			IEA	4	84,135,530	84,148,503	RGD:1600115	ENSEMBL
G	Pou1f1	POU class 1 homeobox 1			ISO	11	2,959,383	2,980,545	RGD:1624291	RGD
G	Pou1f1	POU class 1 homeobox 1			IEA	11	2,959,383	2,980,545	RGD:1600115	ENSEMBL
somatotropin secreting cell differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Pou1f1	POU class 1 homeobox 1			ISO	11	2,959,383	2,980,545	RGD:1624291	RGD
G	Pou1f1	POU class 1 homeobox 1			ISO	11	2,959,383	2,980,545	RGD:1624291	RGD
G	Prop1	PROP paired-like homeobox 1			ISO	10	36,527,112	36,529,573	RGD:1624291	RGD
G	Prop1	PROP paired-like homeobox 1			IEA	10	36,527,112	36,529,573	RGD:1600115	ENSEMBL
G	Wnt4	wingless-type MMTV integration site family, member 4			ISO	5	156,064,371	156,083,198	RGD:1624291	RGD
G	Wnt4	wingless-type MMTV integration site family, member 4			IEA	5	156,064,371	156,083,198	RGD:1600115	ENSEMBL
striatal medium spiny neuron differentiation
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Bcl11b	B-cell CLL/lymphoma 11B (zinc finger protein)			ISO	6	132,292,671	132,384,572	RGD:1624291	RGD
G	Bcl11b	B-cell CLL/lymphoma 11B (zinc finger protein)			IEA	6	132,292,671	132,384,572	RGD:1600115	ENSEMBL
G	Shank3	SH3 and multiple ankyrin repeat domains 3			ISO	7	127,817,026	127,877,875	RGD:1624291	RGD
G	Shank3	SH3 and multiple ankyrin repeat domains 3			ISS	7	127,817,026	127,877,875	RGD:1600115	BHF-UCL
striatum development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Bbs1	Bardet-Biedl syndrome 1			ISO	1	207,503,399	207,521,683	RGD:1624291	RGD
G	Bbs1	Bardet-Biedl syndrome 1			IEA	1	207,503,399	207,521,683	RGD:1600115	ENSEMBL
G	Bbs2	Bardet-Biedl syndrome 2			ISO	19	11,347,432	11,382,830	RGD:1624291	RGD
G	Bbs2	Bardet-Biedl syndrome 2			IEA	19	11,347,432	11,382,830	RGD:1600115	ENSEMBL
G	Bbs4	Bardet-Biedl syndrome 4			ISO	8	63,153,456	63,189,904	RGD:1624291	RGD
G	Bbs4	Bardet-Biedl syndrome 4			IEA	8	63,153,456	63,189,904	RGD:1600115	ENSEMBL
G	Cntnap2	contactin associated protein-like 2			ISO	4	74,277,978	75,440,178	RGD:1624291	RGD
G	Drd1	dopamine receptor D1			ISO	17	16,655,926	16,658,161	RGD:1624291	RGD
G	Drd1	dopamine receptor D1			IEA	17	16,655,926	16,658,161	RGD:1600115	ENSEMBL
G	Hprt1	hypoxanthine phosphoribosyltransferase 1			ISO	X	139,929,647	139,961,616	RGD:1624291	RGD
G	Htt	huntingtin			ISO	14	81,490,322	81,636,856	RGD:1624291	RGD
G	Htt	huntingtin			ISO	14	81,490,322	81,636,856	RGD:1624291	RGD
G	Htt	huntingtin			IEA	14	81,490,322	81,636,856	RGD:1600115	ENSEMBL
G	Mkks	McKusick-Kaufman syndrome			ISO	3	124,975,099	124,993,345	RGD:1624291	RGD
G	Mkks	McKusick-Kaufman syndrome			IEA	3	124,975,099	124,993,345	RGD:1600115	ENSEMBL
G	Ogdh	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)			IEA	14	87,022,994	87,090,768	RGD:1600115	ENSEMBL
G	Rarb	retinoic acid receptor, beta			ISO				RGD:1624291	RGD
G	Slitrk5	SLIT and NTRK-like family, member 5			ISO	15	96,407,553	96,412,374	RGD:1624291	RGD
subpallium development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Fgf8	fibroblast growth factor 8			ISO	1	250,951,023	250,956,730	RGD:1624291	RGD
G	Fgf8	fibroblast growth factor 8			IEA	1	250,951,023	250,956,730	RGD:1600115	ENSEMBL
G	Gli3	GLI family zinc finger 3			IMP	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3			ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
subpallium neuron fate commitment
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Ascl1	achaete-scute complex homolog 1 (Drosophila)			ISO	7	24,145,578	24,168,494	RGD:1624291	RGD
G	Ascl1	achaete-scute complex homolog 1 (Drosophila)			IEA	7	24,145,578	24,168,494	RGD:1600115	ENSEMBL
G	Gsx2	GS homeobox 2			ISO	14	35,489,441	35,491,165	RGD:1624291	RGD
G	Gsx2	GS homeobox 2			IEA	14	35,489,441	35,491,165	RGD:1600115	ENSEMBL
substantia nigra development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Fgf2	fibroblast growth factor 2			ISO	2	123,893,314	123,947,136	RGD:1624291	RGD
G	Fgf2	fibroblast growth factor 2			IEA	2	123,893,314	123,947,136	RGD:1600115	ENSEMBL
G	Fgfr3	fibroblast growth factor receptor 3			ISO	14	82,683,191	82,697,229	RGD:1624291	RGD
G	Fgfr3	fibroblast growth factor receptor 3			IEA	14	82,683,191	82,697,229	RGD:1600115	ENSEMBL
subthalamic nucleus development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Pitx2	paired-like homeodomain 2			ISO	2	226,581,170	226,601,319	RGD:1624291	RGD
subthalamus development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Uqcrq	ubiquinol-cytochrome c reductase, complex III subunit VII			IEA	10	38,889,265	38,892,552	RGD:1600115	ENSEMBL
superior temporal gyrus development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cntnap2	contactin associated protein-like 2			ISO	4	74,277,978	75,440,178	RGD:1624291	RGD
G	Gsk3b	glycogen synthase kinase 3 beta			ISO	11	64,284,731	64,428,698	RGD:1624291	RGD
G	Gsk3b	glycogen synthase kinase 3 beta			IEA	11	64,284,731	64,428,698	RGD:1600115	ENSEMBL
tangential migration from the subventricular zone to the olfactory bulb
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Lrrk2	leucine-rich repeat kinase 2			ISO	7	130,105,902	130,267,747	RGD:1624291	RGD
G	Ogdh	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)			IEA	14	87,022,994	87,090,768	RGD:1600115	ENSEMBL
G	Slit1	slit homolog 1 (Drosophila)			ISO	1	246,813,909	246,964,408	RGD:1624291	RGD
G	Slit1	slit homolog 1 (Drosophila)			IEA	1	246,813,909	246,964,408	RGD:1600115	ENSEMBL
G	Srf	serum response factor (c-fos serum response element-binding transcription factor)			ISO	9	9,788,378	9,797,639	RGD:1624291	RGD
telencephalon cell migration
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Cxcl12	chemokine (C-X-C motif) ligand 12			IMP	4	153,503,576	153,516,423	RGD:2306584	RGD
G	Cxcr4	chemokine (C-X-C motif) receptor 4			IMP	13	41,308,286	41,312,190	RGD:2306584	RGD
G	Foxb1	forkhead box B1			ISS	8	74,200,271	74,202,891	RGD:1600115	UniProtKB
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Slit1	slit homolog 1 (Drosophila)			ISO	1	246,813,909	246,964,408	RGD:1624291	RGD
G	Slit2	slit homolog 2 (Drosophila)			ISO	14	67,546,283	67,891,840	RGD:1624291	RGD
G	Tnr	tenascin R			ISO	13	75,271,116	75,347,181	RGD:1624291	RGD
telencephalon development
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Avpr1a	arginine vasopressin receptor 1A			IEP	7	62,225,537	62,229,461	RGD:2304223	RGD
G	Avpr2	arginine vasopressin receptor 2			IEP	X	159,821,860	159,823,488	RGD:2304223	RGD
G	Bmp2	bone morphogenetic protein 2			ISO	3	121,372,692	121,381,236	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Cdk5	cyclin-dependent kinase 5			ISO	4	6,119,704	6,124,186	RGD:1624291	RGD
G	Erbb4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)			IEP	9	66,843,898	67,967,970	RGD:2290000	RGD
G	Fezf1	Fez family zinc finger 1			ISO	4	49,641,144	49,644,471	RGD:1624291	RGD
G	Fezf2	Fez family zinc finger 2			ISO	15	14,350,796	14,354,585	RGD:1624291	RGD
G	Fgf8	fibroblast growth factor 8			ISO	1	250,951,023	250,956,730	RGD:1624291	RGD
G	Gli3	GLI family zinc finger 3			IMP	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3			ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
G	Gli3	GLI family zinc finger 3			IMP	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3			ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
G	Gli3	GLI family zinc finger 3			IMP	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3			ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
G	Hes1	hairy and enhancer of split 1 (Drosophila)			ISO	11	72,603,482	72,605,673	RGD:1624291	RGD
G	Hes1	hairy and enhancer of split 1 (Drosophila)			ISO	11	72,603,482	72,605,673	RGD:1624291	RGD
G	Hes5	hairy and enhancer of split 5 (Drosophila)			ISO	5	171,763,869	171,764,636	RGD:1624291	RGD
G	Hes5	hairy and enhancer of split 5 (Drosophila)			ISO	5	171,763,869	171,764,636	RGD:1624291	RGD
G	Hes5	hairy and enhancer of split 5 (Drosophila)			ISS	5	171,763,869	171,764,636	RGD:1600115	UniProtKB
G	Ift88	intraflagellar transport 88 homolog (Chlamydomonas)			ISO	15	36,468,007	36,560,959	RGD:1624291	RGD
G	Ift88	intraflagellar transport 88 homolog (Chlamydomonas)			IEA	15	36,468,007	36,560,959	RGD:1600115	ENSEMBL
G	Kat2a	K(lysine) acetyltransferase 2A			ISO	10	89,642,002	89,649,953	RGD:1624291	RGD
G	Kat2a	K(lysine) acetyltransferase 2A			IEA	10	89,642,002	89,649,953	RGD:1600115	ENSEMBL
G	Lhx1	LIM homeobox 1			IEA	10	72,800,497	72,805,799	RGD:1600115	ENSEMBL
G	Lhx2	LIM homeobox 2			ISO	3	18,129,455	18,147,357	RGD:1624291	RGD
G	Lhx2	LIM homeobox 2			ISO	3	18,129,455	18,147,357	RGD:1624291	RGD
G	Lhx2	LIM homeobox 2			ISO	3	18,129,455	18,147,357	RGD:1624291	RGD
G	Lhx2	LIM homeobox 2			ISO	3	18,129,455	18,147,357	RGD:1624291	RGD
G	Ncor2	nuclear receptor co-repressor 2			ISO	12	32,617,643	32,725,753	RGD:1624291	RGD
G	Ncor2	nuclear receptor co-repressor 2			IEA	12	32,617,643	32,725,753	RGD:1600115	ENSEMBL
G	Nkx2-1	NK2 homeobox 1			ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Oxtr	oxytocin receptor			IEP	4	148,314,089	148,326,797	RGD:2304223	RGD
G	Pfdn1	prefoldin subunit 1			ISO	18	29,043,386	29,096,475	RGD:1624291	RGD
G	Pfdn1	prefoldin subunit 1			IEA	18	29,043,386	29,096,475	RGD:1600115	ENSEMBL
G	Rpgrip1l	Rpgrip1-like			ISO	19	16,859,114	16,952,054	RGD:1624291	RGD
G	Scn5a	sodium channel, voltage-gated, type V, alpha subunit			IEP	8	124,446,479	124,545,301	RGD:6484221	RGD
G	Six3	SIX homeobox 3			ISO	6	8,981,995	9,019,365	RGD:1624291	RGD
G	Slc1a2	solute carrier family 1 (glial high affinity glutamate transporter), member 2			ISO	3	87,870,558	87,992,401	RGD:1624291	RGD
G	Slc8a1	solute carrier family 8 (sodium/calcium exchanger), member 1			IEP	6	4,421,046	4,691,716	RGD:2316981	RGD
G	Slc8a2	solute carrier family 8 (sodium/calcium exchanger), member 2			IEP	1	76,473,938	76,498,624	RGD:2316981	RGD
G	Slc8a3	solute carrier family 8 (sodium/calcium exchanger), member 3			IEP	6	105,012,888	105,159,942	RGD:2316983	RGD
G	Tctn1	tectonic family member 1			ISO	12	35,505,936	35,538,060	RGD:1624291	RGD
G	Tctn1	tectonic family member 1			IEA	12	35,505,936	35,538,060	RGD:1600115	ENSEMBL
telencephalon regionalization
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Bmp2	bone morphogenetic protein 2			ISO	3	121,372,692	121,381,236	RGD:1624291	RGD
G	Bmp2	bone morphogenetic protein 2			IEA	3	121,372,692	121,381,236	RGD:1600115	ENSEMBL
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G