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Gene-Chemical Interaction Annotations
Gene-Chemical Interaction AnnotationsTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | (-)-epigallocatechin 3-gallate | multiple interactions | ISO | RGD:732435 | 6480464 | [potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of BBS2 mRNA | CTD | PMID:22079256 | 17alpha-ethynylestradiol | affects expression | ISO | RGD:732436 | 6480464 | Ethinyl Estradiol affects the expression of BBS2 mRNA | CTD | PMID:17555576 | 2,3,7,8-tetrachlorodibenzodioxine | increases expression | EXP | | 6480464 | Tetrachlorodibenzodioxin results in increased expression of BBS2 mRNA | CTD | PMID:21215274 | 2,3,7,8-tetrachlorodibenzodioxine | affects expression | ISO | RGD:732436 | 6480464 | Tetrachlorodibenzodioxin affects the expression of BBS2 mRNA | CTD | PMID:21570461 | 2,3,7,8-tetrachlorodibenzodioxine | affects expression | EXP | | 6480464 | Tetrachlorodibenzodioxin affects the expression of BBS2 mRNA | CTD | PMID:22298810 | 2-methylcholine | affects expression | ISO | RGD:732435 | 6480464 | beta-methylcholine affects the expression of BBS2 mRNA | CTD | PMID:21179406 | ammonium chloride | affects expression | EXP | | 6480464 | Ammonium Chloride affects the expression of BBS2 mRNA | CTD | PMID:16483693 | benzo[a]pyrene | increases expression | ISO | RGD:732436 | 6480464 | Benzo(a)pyrene results in increased expression of BBS2 mRNA | CTD | PMID:22228805 | copper(2+) sulfate | decreases expression | ISO | RGD:732435 | 6480464 | Copper Sulfate results in decreased expression of BBS2 mRNA | CTD | PMID:19549813 | menadione | affects expression | ISO | RGD:732435 | 6480464 | Vitamin K 3 affects the expression of BBS2 mRNA | CTD | PMID:20044591 | paracetamol | increases expression | ISO | RGD:732435 | 6480464 | Acetaminophen results in increased expression of BBS2 mRNA | CTD | PMID:22230336 | perfluorooctanoic acid | increases expression | EXP | | 6480464 | perfluorooctanoic acid results in increased expression of BBS2 mRNA | CTD | PMID:16221955 | pirinixic acid | increases expression | EXP | | 6480464 | pirinixic acid results in increased expression of BBS2 mRNA | CTD | PMID:22484513 | quercetin | decreases expression | ISO | RGD:732435 | 6480464 | Quercetin results in decreased expression of BBS2 mRNA | CTD | PMID:21632981 | tamoxifen | multiple interactions | EXP | | 6480464 | [bexarotene co-treated with Tamoxifen] results in increased expression of BBS2 mRNA | CTD | PMID:17630414 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene Ontology Annotations
Disease Annotations
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Gene-Chemical Interaction Annotations
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Gene Ontology Annotations
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References - curated
RGD Disease Portals| Bbs2 has been annotated in the following RGD Disease Portals. |
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Comparative Map Data| Bbs2 (Rattus norvegicus) |
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| BBS2 (Homo sapiens) |
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| Bbs2 (Mus musculus) |
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Position Markers| RH131221 |
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QTLs in Region (RGSC Genome Assembly v3.4)| The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Nucleotide Sequences| RefSeq Acc Id: | NM_053618 | ||||||||||||||||||||
| RefSeq Status: | PROVISIONAL | ||||||||||||||||||||
| Type: | CODING | ||||||||||||||||||||
| Protein Acc Id: | NP_446070 | ||||||||||||||||||||
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Protein Sequences| Protein RefSeqs | NP_446070 | (Get FASTA) |
| GenBank Protein | AAK28554 | (Get FASTA) |
| EDL87354 | (Get FASTA) | |
| Q99MH9 | (Get FASTA) |
Strain Sequence Variants
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External Database Links| Database | Acc Id | Source(s) |
| Ensembl Genes | ENSRNOG00000019020 | ENTREZGENE, UniProtKB/Swiss-Prot |
| Ensembl Protein | ENSRNOP00000026076 | ENTREZGENE, UniProtKB/Swiss-Prot |
| Ensembl Transcript | ENSRNOT00000026076 | ENTREZGENE, UniProtKB/Swiss-Prot |
| Entrez Gene | 113948 | ENTREZGENE |
| Gene3D-CATH | WD40/YVTN_repeat-like | UniProtKB/Swiss-Prot |
| Germonline | ENSRNOG00000019020 | UniProtKB/Swiss-Prot |
| HomoloGene Group ID | 12122 | ENTREZGENE |
| InterPro | Bardet-Biedl_syndrome_2_prot | UniProtKB/Swiss-Prot |
| WD40/YVTN_repeat-like_dom | UniProtKB/Swiss-Prot | |
| WD40_repeat_dom | UniProtKB/Swiss-Prot | |
| IPI | IPI00325041 | UniProtKB/Swiss-Prot |
| KEGG Report | rno:113948 | ENTREZGENE, UniProtKB/Swiss-Prot |
| PIRSF | BBS2 | UniProtKB/Swiss-Prot |
| Superfamily-SCOP | WD40_like | UniProtKB/Swiss-Prot |
| UniGene | Rn.15987 | ENTREZGENE |
| UniProt | BBS2_RAT | UniProtKB/Swiss-Prot |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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| 2009-11-05 | Bbs2 | Bardet-Biedl syndrome 2 | Bbs2 | Bardet-Biedl syndrome 2 homolog (human) | Nomenclature updated to reflect human and mouse nomenclature | 10779 | APPROVED |
| 2006-03-02 | Bardet-Biedl syndrome 2 homolog (human) | Bbs2 | Bardet-Biedl syndrome 2 (human) | Name updated | 10779 | APPROVED | |
| 2002-07-09 | Bbs2 | Bardet-Biedl syndrome 2 (human) | Symbol and Name updated to reflect Human and Mouse nomenclature | 1755 | APPROVED |
RGD Curation Notes| Note Type | Note | Reference |
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| More on Bbs2 | |
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Entrez Gene |
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Ensembl Gene |
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NCBI Map Viewer |
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Vista |
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Vista + UCSC |
| RGD Object Information | |
| RGD ID: | 71091 |
| Created: | 2002-07-09 |
| Species: | Rattus norvegicus |
| Last Modified: | 2013-04-16 |
| Status: | ACTIVE |
© Bioinformatics Program, HMGC at the Medical College of Wisconsin
RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.




