Gene: H2afx (H2A histone family, member X) Rattus norvegicus
Symbol: H2afx
Name: H2A histone family, member X
Description: ENCODES a protein that exhibits damaged DNA binding (ortholog); enzyme binding (ortholog); histone binding (ortholog); INVOLVED IN cellular response to gamma radiation; cellular senescence; cerebral cortex development; PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; systemic lupus erythematosus pathway; ASSOCIATED WITH Drug-Induced Liver Injury; Hypertension; Ischemic Attack, Transient; FOUND IN nucleus; chromatin (ortholog); chromosome (ortholog); INTERACTS WITH (-)-ephedrine; 1,3-dinitrobenzene; 17beta-estradiol
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC500987; RGD1566119; similar to Histone H2A.x (H2a/x)
Orthologs:
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0848,665,652 - 48,666,981 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0847,284,623 - 47,285,952 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.4847,312,609 - 47,313,938 (+)NCBIRGSC3.4rn4RGSC3.4
Celera844,258,161 - 44,259,490 (+)NCBI
Cytogenetic Map8q22NCBImapview
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on H2afx
Entrez Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 1566119
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2016-05-31
Status: ACTIVE