Gene: Shh (sonic hedgehog) Rattus norvegicus
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Symbol: Shh
Name: sonic hedgehog
Description: ENCODES a protein that exhibits calcium ion binding (ortholog); glycoprotein binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN commissural neuron axon guidance; digestive tract mesoderm development; epithelial tube branching involved in lung morphogenesis; PARTICIPATES IN Hedgehog signaling pathway; altered Hedgehog signaling pathway; forkhead class A signaling pathway; ASSOCIATED WITH acute myocardial infarction; Anorectal Atresia; anorectal stricture; FOUND IN axon; dendrite; endoplasmic reticulum; INTERACTS WITH (S)-amphetamine; 17beta-estradiol; ammonium chloride
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: sonic hedgehog homolog; sonic hedgehog homolog (Drosophila); sonic hedgehog homolog, (Drosophila); sonic hedgehog protein
Orthologs:
Homo sapiens (human) : SHH (sonic hedgehog)  HGNC
Mus musculus (house mouse) : Shh (sonic hedgehog)  MGI
Chinchilla lanigera (long-tailed chinchilla) : Shh (sonic hedgehog)
Pan paniscus (bonobo/pygmy chimpanzee) : SHH (sonic hedgehog)
Canis lupus familiaris (dog) : SHH (sonic hedgehog)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Shh (sonic hedgehog)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04718,538 - 727,691 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.04711,420 - 720,573 (-)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.442,200,504 - 2,209,657 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.142,200,503 - 2,209,657 (+)NCBI
Celera43,316,537 - 3,325,690 (-)NCBI
Cytogenetic Map4q11NCBImapview
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Shh
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
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RGD Object Information
RGD ID: 3673
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2017-05-23
Status: ACTIVE