Gene: Pax6 (paired box 6) Rattus norvegicus
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Symbol: Pax6
Name: paired box 6
Description: ENCODES a protein that exhibits AT DNA binding; double-stranded DNA binding; sequence-specific DNA binding; INVOLVED IN astrocyte differentiation; brain development; cellular response to drug; PARTICIPATES IN maturity onset diabetes of the young pathway; ASSOCIATED WITH abnormal abducens nerve morphology; abnormal endocrine pancreas physiology; abnormal eye physiology; ASSOCIATED WITH Autistic Disorder; autistic disorder; Eye Abnormalities; FOUND IN nuclear chromatin; nucleus; cytoplasm (ortholog); INTERACTS WITH 3H-1,2-dithiole-3-thione; 6-propyl-2-thiouracil; aldehydo-D-glucose
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: oculorhombin; paired box gene 6; Paired box homeotic gene 6; paired box protein Pax-6
Orthologs:
Homo sapiens (human) : PAX6 (paired box 6)  HGNC  AGR
Mus musculus (house mouse) : Pax6 (paired box 6)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Pax6 (paired box 6)
Pan paniscus (bonobo/pygmy chimpanzee) : PAX6 (paired box 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pax6 (paired box 6)
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Allele / Splice: Pax6Sey   Pax6Sey2  
Genetic Models: SD-Pax6Sey2/Mce SD-Pax6Sey/Mce
Is Marker For: Strains:   SD-Pax6Sey/Mce  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0395,700,241 - 95,728,682 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03102,320,059 - 102,348,223 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4391,127,605 - 91,149,178 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1391,023,827 - 91,045,776 (+)NCBI
Celera391,190,477 - 91,211,449 (+)NCBICelera
Cytogenetic Map3q33NCBI
RH 3.4 Map3722.9RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Related Rat Strains
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pax6
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 3258
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2017-11-07
Status: ACTIVE