Ssbp3 (single stranded DNA binding protein 3)

Gene: Ssbp3 (single stranded DNA binding protein 3) Rattus norvegicus

Analyze

Symbol:

Ssbp3

Name:

single stranded DNA binding protein 3

RGD ID:

621502

Description:

Predicted to enable transcription coactivator activity. Predicted to be involved in several processes, including head morphogenesis; nervous system development; and positive regulation of anterior head development. Predicted to act upstream of or within hematopoietic progenitor cell differentiation. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus. Orthologous to human SSBP3 (single stranded DNA binding protein 3); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC102549605; MGC124589; sequence-specific single-stranded-DNA-binding protein; single-stranded DNA-binding protein 3; Ssdp; Ssdp3; uncharacterized LOC102549605

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	126,920,145 - 127,057,968 (+)	NCBI		GRCr8
mRatBN7.2	5	121,691,370 - 121,828,035 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	121,691,393 - 121,827,992 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	124,310,490 - 124,447,492 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	126,033,508 - 126,170,510 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	126,084,812 - 126,221,819 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	126,511,339 - 126,649,830 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	126,511,350 - 126,648,661 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	130,364,154 - 130,500,627 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	127,987,980 - 128,127,771 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	127,993,205 - 128,132,997 (+)	NCBI
Celera	5	120,438,879 - 120,575,397 (+)	NCBI		Celera
Cytogenetic Map	5	q34	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Developmental Disease (ISO)

genetic disease (ISO)

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-dinitrotoluene (EXP)

2-butoxyethanol (ISO)

2-hydroxypropanoic acid (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxynon-2-enal (ISO)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

calcium silicate (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

choline (ISO)

ciguatoxin CTX1B (ISO)

copper atom (ISO)

copper(0) (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

diarsenic trioxide (ISO)

diazinon (ISO)

dibutyl phthalate (ISO)

diethylstilbestrol (EXP)

diquat (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

ethanol (ISO)

fenthion (ISO)

folic acid (ISO)

FR900359 (ISO)

fulvestrant (ISO)

gentamycin (EXP)

indometacin (ISO)

L-methionine (ISO)

lead diacetate (ISO)

methapyrilene (ISO)

methidathion (ISO)

oxaliplatin (EXP)

paracetamol (EXP,ISO)

PhIP (EXP)

pirinixic acid (ISO)

potassium chromate (ISO)

pregnenolone 16alpha-carbonitrile (ISO)

propiconazole (ISO)

pyrogallol (ISO)

rac-lactic acid (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

tetrachloromethane (EXP)

titanium dioxide (ISO)

topotecan (EXP)

triphenyl phosphate (EXP)

triptonide (ISO)

troglitazone (ISO)

tungsten (ISO)

urethane (ISO)

valproic acid (ISO)

zinc protoporphyrin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

head development (ISO)

head morphogenesis (IEA,ISO)

hematopoietic progenitor cell differentiation (IEA,ISO)

mesendoderm development (IEA,ISO)

midbrain-hindbrain boundary initiation (IEA,ISO)

positive regulation of anterior head development (IEA,ISO)

positive regulation of cell population proliferation (IEA,ISO)

positive regulation of DNA-templated transcription (ISO)

positive regulation of transcription by RNA polymerase II (IBA,IEA,ISO)

prechordal plate formation (IEA,ISO)

protein-containing complex assembly (IEA,ISO)

Cellular Component

nucleus (IBA,IEA)

protein-containing complex (ISO)

transcription regulator complex (IEA,ISO)

Molecular Function

protein binding (ISO)

single-stranded DNA binding (IEA,TAS)

transcription coactivator activity (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
3.	Cloning of a cDNA encoding a sequence-specific single-stranded-DNA-binding protein from Rattus norvegicus.	Raval-Fernandes S, etal., Gene 1999 Sep 3;237(1):201-7.
4.	GOA pipeline	RGD automated data pipeline
5.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:12477932	PMID:15857913	PMID:19323994	PMID:24029230	PMID:26494787

Genomics

Comparative Map Data

Ssbp3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	126,920,145 - 127,057,968 (+)	NCBI		GRCr8
mRatBN7.2	5	121,691,370 - 121,828,035 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	121,691,393 - 121,827,992 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	124,310,490 - 124,447,492 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	126,033,508 - 126,170,510 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	126,084,812 - 126,221,819 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	126,511,339 - 126,649,830 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	126,511,350 - 126,648,661 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	130,364,154 - 130,500,627 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	127,987,980 - 128,127,771 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	127,993,205 - 128,132,997 (+)	NCBI
Celera	5	120,438,879 - 120,575,397 (+)	NCBI		Celera
Cytogenetic Map	5	q34	NCBI

SSBP3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	54,225,432 - 54,413,490 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	54,225,432 - 54,413,479 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	54,691,105 - 54,879,163 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	54,464,783 - 54,644,680 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	54,404,615 - 54,583,917	NCBI
Celera	1	52,979,826 - 53,159,767 (-)	NCBI		Celera
Cytogenetic Map	1	p32.3	NCBI
HuRef	1	52,806,513 - 52,987,387 (-)	NCBI		HuRef
CHM1_1	1	54,807,651 - 54,988,420 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	54,108,317 - 54,296,354 (-)	NCBI		T2T-CHM13v2.0

Ssbp3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	106,768,667 - 106,906,891 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	106,767,898 - 106,906,891 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	106,911,470 - 107,049,694 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	106,910,701 - 107,049,694 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	106,584,075 - 106,722,299 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	106,409,402 - 106,547,626 (+)	NCBI		MGSCv36	mm8
Celera	4	105,272,425 - 105,410,615 (+)	NCBI		Celera
Cytogenetic Map	4	C7	NCBI
cM Map	4	49.9	NCBI

Ssbp3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955464	4,901,151 - 5,047,656 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955464	4,901,150 - 5,049,341 (+)	NCBI	ChiLan1.0	ChiLan1.0

SSBP3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	172,429,230 - 172,608,737 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	171,570,463 - 171,749,558 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	53,501,656 - 53,680,682 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	55,094,800 - 55,281,039 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	55,094,820 - 55,272,207 (-)	Ensembl	panpan1.1		panPan2

SSBP3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	54,690,632 - 54,826,691 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	54,662,840 - 54,824,960 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	54,729,165 - 54,893,490 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	54,849,788 - 55,013,185 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	54,849,889 - 55,013,451 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	54,844,717 - 55,009,418 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	54,734,421 - 54,898,735 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	55,123,610 - 55,288,431 (+)	NCBI		UU_Cfam_GSD_1.0

Ssbp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	68,458,512 - 68,614,243 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936522	6,802,052 - 6,956,129 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936522	6,802,057 - 6,957,640 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SSBP3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	157,911,493 - 158,081,476 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	157,911,583 - 158,081,478 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

SSBP3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	78,528,630 - 78,708,518 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666033	38,577,763 - 38,758,509 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ssbp3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624934	161,054 - 311,937 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624934	161,323 - 313,621 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Ssbp3
503 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	36
Count of miRNA genes:	35
Interacting mature miRNAs:	35
Transcripts:	ENSRNOT00000011408
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
70212	Niddm25	Non-insulin dependent diabetes mellitus QTL 25	3.54		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	5	1	131345958	Rat
1576314	Eutr1	Estrogen induced uterine response QTL 1			uterus integrity trait (VT:0010575)	pyometritis severity score (CMO:0002009)	5	2138965	166875058	Rat
2290448	Scl54	Serum cholesterol level QTL 54	2.93		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	31663789	131345958	Rat
1641912	Alcrsp18	Alcohol response QTL 18			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	5	35189153	141643988	Rat
1549845	Scl44	Serum cholesterol level QTL 44	6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	40128307	148607290	Rat
1331801	Rf33	Renal function QTL 33	4.149		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	5	43726656	129132602	Rat
1578766	Tcas11	Tongue tumor susceptibility QTL 11	4.12		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	5	46711509	161317411	Rat
1576312	Emca8	Estrogen-induced mammary cancer QTL 8	4.1		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	50328551	141643988	Rat
70189	Mcs5	Mammary carcinoma susceptibility QTL 5	10.51		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	5	55805606	132207589	Rat
1358895	Bp254	Blood pressure QTL 254	3.6	0.0003	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	58829236	128034027	Rat
61426	Scl2	Serum cholesterol level QTL 2	7.3	0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	5	59793399	143070159	Rat
61393	Bp7	Blood pressure QTL 7	4.5	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	60293434	161481680	Rat
2306971	Anxrr21	Anxiety related response QTL 21	9.47		fear/anxiety-related behavior trait (VT:1000241)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	5	66174080	124160948	Rat
1354598	Srn6	Serum renin concentration QTL 6	3.8		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	5	69540295	151018848	Rat
1298070	Scl18	Serum cholesterol level QTL 18	3.7		blood LDL cholesterol amount (VT:0000181)	calculated plasma low density lipoprotein cholesterol level (CMO:0001245)	5	79584860	124584860	Rat
1598846	Bp293	Blood pressure QTL 293	3.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	79584860	124584860	Rat
1598859	Cm66	Cardiac mass QTL 66	2		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	79584860	124584860	Rat
1302790	Scl20	Serum cholesterol level QTL 20	6.4	0.0001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	82394392	166664054	Rat
1298086	Bp156	Blood pressure QTL 156			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	84132602	129132602	Rat
7411601	Foco12	Food consumption QTL 12	19.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	87468046	132468046	Rat
7411564	Bw135	Body weight QTL 135		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	87468046	132468046	Rat
7411582	Foco3	Food consumption QTL 3	7.5	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	5	87468046	132468046	Rat
6903316	Bw113	Body weight QTL 113	2	0.0103	body mass (VT:0001259)	body weight (CMO:0000012)	5	87765973	132765973	Rat
1358889	Bp261	Blood pressure QTL 261	2.86		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	5	90067849	128034027	Rat
1358909	Kidm25	Kidney mass QTL 25	1.87		kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	5	90067849	128034027	Rat
631527	Tls1	T-lymphoma susceptibility QTL 1	0	0.001	thymus integrity trait (VT:0010555)	post-insult time to onset of T-cell lymphoma (CMO:0001907)	5	90450144	135450144	Rat
61452	Ciaa5	CIA Autoantibody QTL 5	3.5		blood autoantibody amount (VT:0003725)	calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)	5	94858972	143070159	Rat
1331796	Thshl2	Thyroid stimulating hormone level QTL 2	2.3		blood thyroid-stimulating hormone amount (VT:0005119)	serum thyroid stimulating hormone level (CMO:0001248)	5	97059760	147465714	Rat
2317753	Glom24	Glomerulus QTL 24	3.1		kidney glomerulus integrity trait (VT:0010546)	kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)	5	97570330	136479578	Rat
1358187	Emca1	Estrogen-induced mammary cancer QTL 1	4.4		mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	5	99216724	148607142	Rat
1578673	Bmd13	Bone mineral density QTL 13	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	5	103689353	148689353	Rat
2317056	Wbc3	White blood cell count QTL 3	2.51	0.01	leukocyte quantity (VT:0000217)	white blood cell count (CMO:0000027)	5	105999803	150999803	Rat
7207488	Bss110	Bone structure and strength QTL 1	8.4		femur strength trait (VT:0010010)	femur stiffness (CMO:0001674)	5	106906205	151906205	Rat
7207491	Bss112	Bone structure and strength QTL 112	7		femur morphology trait (VT:0000559)	femur midshaft cortical cross-sectional area (CMO:0001663)	5	106906205	151906205	Rat
7207481	Bss106	Bone structure and strength QTL 106	7.9		femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	106906205	151906205	Rat
7207486	Bss109	Bone structure and strength QTL 109			femur strength trait (VT:0010010)	femur total energy absorbed before break (CMO:0001677)	5	106906205	151906205	Rat
1549838	Bss4	Bone structure and strength QTL 4	9.2		femur strength trait (VT:0010010)	femur midshaft polar moment of inertia (CMO:0001669)	5	106906205	151906205	Rat
1298089	Scl14	Serum cholesterol level QTL 14	5.8	0.0004	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	5	108845856	153845856	Rat
1598847	Cm62	Cardiac mass QTL 62	3.4		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	5	108845856	153845856	Rat
8657050	Bw146	Body weight QTL 146	19.84	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	5	108938288	153938288	Rat
8694441	Bw169	Body weight QTL 169	17.61	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	5	111416838	156416838	Rat
8694198	Abfw3	Abdominal fat weight QTL 3	16.13	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	5	111416838	156416838	Rat
8694389	Bw160	Body weight QTL 160	6.17	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	5	111416838	156416838	Rat
8552960	Pigfal15	Plasma insulin-like growth factor 1 level QTL 15			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	5	111416838	156416838	Rat
7794739	Bp372	Blood pressure QTL 372		0.0058	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	5	117913688	125222967	Rat
1582230	Bw78	Body weight QTL 78	3.2	0.0016	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	5	119085612	128034027	Rat
1581510	Cm54	Cardiac mass QTL 54	3.4	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	5	120740824	143608494	Rat
2293642	Bss37	Bone structure and strength QTL 37	4.64	0.0001	femur strength trait (VT:0010010)	femur ultimate force (CMO:0001675)	5	120740824	151018848	Rat

Markers in Region

AU046696

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	121,770,462 - 121,770,625 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	126,590,714 - 126,590,876	NCBI	Rnor6.0
Rnor_5.0	5	130,442,359 - 130,442,521	UniSTS	Rnor5.0
RGSC_v3.4	5	128,068,368 - 128,068,530	UniSTS	RGSC3.4
Celera	5	120,517,973 - 120,518,135	UniSTS
Cytogenetic Map	5	q34	UniSTS

RH130317

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	5	121,827,954 - 121,828,130 (+)	MAPPER	mRatBN7.2
Rnor_6.0	5	126,648,624 - 126,648,799	NCBI	Rnor6.0
Rnor_5.0	5	130,499,421 - 130,499,596	UniSTS	Rnor5.0
RGSC_v3.4	5	128,127,711 - 128,127,886	UniSTS	RGSC3.4
Celera	5	120,575,337 - 120,575,512	UniSTS
RH 3.4 Map	5	807.3	UniSTS
Cytogenetic Map	5	q34	UniSTS

AU047859

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	5	130,420,058 - 130,420,280	NCBI	Rnor5.0
RGSC_v3.4	5	128,046,344 - 128,046,565	UniSTS	RGSC3.4
Celera	5	120,495,899 - 120,496,136	UniSTS
Cytogenetic Map	5	q34	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	35	48	33	19	33			73	29	41	11
Low		8	9	8		8	8	11	1	6			8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_053358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238533	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238534	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238535	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238536	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238537	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238538	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006238539	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017593663	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039110873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288492	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288494	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288495	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288496	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063288498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC122593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF121893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY724490	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC107666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ230168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000011408 ⟹ ENSRNOP00000011408

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	121,691,393 - 121,827,992 (+)	Ensembl
Rnor_6.0 Ensembl	5	126,511,350 - 126,648,661 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000096305 ⟹ ENSRNOP00000082297

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	121,691,693 - 121,827,983 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000101748 ⟹ ENSRNOP00000089190

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	121,691,393 - 121,827,722 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000104386 ⟹ ENSRNOP00000080007

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	121,691,393 - 121,827,992 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000112504 ⟹ ENSRNOP00000095848

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	5	121,691,693 - 121,827,983 (+)	Ensembl

RefSeq Acc Id:

NM_053358 ⟹ NP_445810

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,920,201 - 127,056,822 (+)	NCBI
mRatBN7.2	5	121,691,393 - 121,828,015 (+)	NCBI
Rnor_6.0	5	126,511,350 - 126,648,684 (+)	NCBI
Rnor_5.0	5	130,364,154 - 130,500,627 (+)	NCBI
RGSC_v3.4	5	127,987,980 - 128,127,771 (+)	RGD
Celera	5	120,438,879 - 120,575,397 (+)	RGD

Sequence:

show sequence

GGCGGCGGCAGAGGCAGCGGTGCTGAAGGCGCAGAGGGCGGCGCAGGCGGAGCCGGGTGGCGGG
CGCGCGGGCCGCGAGCAAGCGAGCTGCAGGCTTCGGGCGGGCGGCGGCGCAGCTCAGGCCGAGC
CGGCGCGGGAGGAGTTCCAGGGCGATGGGGCCGCGGCCGGGGCTGACGCTTTGACAGCTGGAAA
GAGCGCGGAGCCAGCGCCGGGGAGGGAGGGAGCGCGGCGAGCGGAGTGCGAGCGAGCGGGCGAG
CGCCGGGAGGGGGCCGGGAGCAGGGCAGCTCGGGAGACCGGACGGTATCGGCGGCGGCGGCGGG
CTCGGCGCCCTCTTCTCTGCAAGCCATGTTTGCCAAAGGCAAAGGCTCGGCGGTGCCCTCGGAC
GGGCAGGCTCGGGAAAAGTTAGCTTTATATGTCTACGAATATTTACTGCACGTAGGAGCACAGA
AATCTGCACAGACCTTCTTATCAGAGATTCGATGGGAAAAAAACATCACACTGGGTGAACCGCC
TGGGTTTCTGCACTCGTGGTGGTGTGTATTTTGGGACCTTTACTGTGCAGCTCCTGAAAGGAGA
GACACTTGTGAACATTCAAGTGAAGCAAAAGCCTTTCATGATTACAGTGCAGCAGCTGCCCCAA
GTCCTGTGCTTGGCAACATTCCCCCCAATGATGGGATGCCTGGAGGCCCCATCCCACCAGGTTT
CTTTCAGCCTTTTATGTCACCGAGATATGCAGGCGGCCCCAGGCCCCCGATCAGAATGGGAAAC
CAGCCTCCAGGAGGAGTTCCTGGGACACAGCCATTGATGCCCAATTCCATGGATCCCACACGAC
AACAAGGTCACCCCAACATGGGAGGGTCAATGCAGAGAATGAACCCTCCCCGAGGCATGGGGCC
CATGGGGCCTGGCCCACAGAATTACGGCAGCGGCATGAGACCACCACCCAACTCCCTCGGCCCC
GCCATGCCTGGGATTAACATGGGCCCAGGAGCTGGCAGACCCTGGCCCAATCCCAACAGTGCTA
ACTCAATCCCGTACTCCTCCTCATCACCCGGAACCTATGTGGGACCCCCTGGTGGTGGCGGCCC
TCCTGGAACCCCCATCATGCCTAGTCCTGCGGATTCAACAAATTCCAGTGACAACATCTACACA
ATGATTAATCCTGTGCCGCCTGGAGGCAGCCGGTCTAACTTTCCAATGGGTCCTGGCTCAGATG
GCCCAATGGGCGGCATGGGAGGCATGGAGCCACACCACATGAATGGATCCTTAGGATCAGGCGA
CATAAATGGACTTCCAAAAAATTCTCCTAACAACATAAGTGGCATTAGCAACCCTCCAGGCACC
CCTCGGGATGACGGCGAGCTGGGGGGGAACTTCCTCCACTCCTTCCAGAACGACAATTATTCTC
CAAGCATGACGATGAGTGTGTGATCCCTTCTCCACAACGCTGAGAGCCGGCATTGCAGGCAGAA
GATGCCAGAAAATTATGCAAGAAGAAGTGAGGTGTCGATACCAGGAGCTGGGGGAGGGCGTCTC
CTGCTCCCCTCCATCCCTCCCATTCTCTCCCCCACCTTTCCCAATTTTAGTTTCATGCAATAAA
AAGGCCAAACTTTTTATTCCGTCAAACATGAAGGACAAAACTCAGAAATATATTTCAAGTCAAC
GACCAGAAAAATCTCACCTTCTCCCTGCCCAAAAGGACCTTTCTGTACATGACACTTTTTGTTG
GGTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGGGATTTTACTGTTGCTGGGATTTTAAATTT
GTTTTTTTGGGGGGATTCTTTGGGGGAATTTTTTTAATGGAAGCTTTTAGCAAGCCCTATGCCC
ACCCAATCAACCTCATTGCTTTCTTCTTTAATAAAAGGAAAAAAGGAAAAAGAAAAAAAAG

hide sequence

RefSeq Acc Id:

XM_006238532 ⟹ XP_006238594

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,920,147 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,691,378 - 121,828,035 (+)	NCBI
Rnor_6.0	5	126,511,339 - 126,649,830 (+)	NCBI
Rnor_5.0	5	130,364,154 - 130,500,627 (+)	NCBI

Sequence:

show sequence

AGACCAGCGGCGGCGGCGGCAGAGGCAGCGGTGCTGAAGGCGCAGAGGGCGGCGCAGGCGGAGC
CGGGTGGCGGGCGCGCGGGCCGCGAGCAAGCGAGCTGCAGGCTTCGGGCGGGCGGCGGCGCAGC
TCAGGCCGAGCCGGCGCGGGAGGAGTTCCAGGGCGATGGGGCCGCGGCCGGGGCTGACGCTTTG
ACAGCTGGAAAGAGCGCGGAGCCAGCGCCGGGGAGGGAGGGAGCGCGGCGAGCGGAGTGCGAGC
GAGCGGGCGAGCGCCGGGAGGGGGCCGGGAGCAGGGCAGCTCGGGAGACCGGACGGTAGCGGCG
GCGGCGGCGGGCTCGGCGCCCTCTTCTCTGCAAGCCATGTTTGCCAAAGGCAAAGGCTCGGCGG
TGCCCTCGGACGGGCAGGCTCGGGAAAAGTTAGCTTTATATGTCTACGAATATTTACTGCACGT
AGGAGCACAGAAATCTGCACAGACCTTCTTATCAGAGATTCGATGGGAAAAAAACATCACACTG
GGTGAACCGCCTGGGTTTCTGCACTCGTGGTGGTGTGTATTTTGGGACCTTTACTGTGCAGCTC
CTGAAAGGAGAGACACTTGTGAACATTCAAGTGAAGCAAAAGCCTTTCATGATTACAGTGCAGC
AGCTGCCCCAAGTCCTGTGCTTGGCAACATTCCCCCCAATGATGGGATGCCTGGAGGCCCCATC
CCACCAGGTTTCTTTCAGGGTCCTCCGGGGTCACAGCCCTCGCCGCACGCACAGCCTCCACCTC
ACAATCCCAGCAGCATGATGGGACCCCACAGTCAGCCTTTTATGTCACCGAGATATGCAGGCGG
CCCCAGGCCCCCGATCAGAATGGGAAACCAGCCTCCAGGAGGAGTTCCTGGGACACAGCCATTG
CTGCCCAATTCCATGGATCCCACACGACAACAAGGTCACCCCAACATGGGAGGGTCAATGCAGA
GAATGAACCCTCCCCGAGGCATGGGGCCCATGGGGCCTGGCCCACAGACTGACCCTTGGTTATC
GTTGCAGAATTACGGCAGCGGCATGAGACCACCACCCAACTCCCTCGGCCCCGCCATGCCTGGG
ATTAACATGGGCCCAGGAGCTGGCAGACCCTGGCCCAATCCCAACAGTGCTAACTCAGGAAGGC
AGCTCCAATCCATGGCTCCTGAATCTTCTTTCCAGATCCCGTACTCCTCCTCATCACCCGGAAC
CTATGTGGGACCCCCTGGTGGTGGCGGCCCTCCTGGAACCCCCATCATGCCTAGTCCTGCGGAT
TCAACAAATTCCAGTGACAACATCTACACAATGATTAATCCTGTGCCGCCTGGAGGCAGCCGGT
CTAACTTTCCAATGGGTCCTGGCTCAGATGGCCCAATGGGCGGCATGGGAGGCATGGAGCCACA
CCACATGAATGGATCCTTAGGATCAGGCGACATAGATGGACTTCCAAAAAATTCTCCTAACAAC
ATAAGTGGCATTAGCAACCCTCCAGGCACCCCTCGGGATGACGGCGAGCTGGGGGGGAACTTCC
TCCACTCCTTCCAGAACGACAATTATTCTCCAAGCATGACGATGAGTGTGTGATCCCTTCTCCA
CAACGCTGAGAGCCGGCATTGCAGGCAGAAGATGCCAGAAATTATGCAAGAAGAAGTGAGGTGT
CGATACCAGGAGCTGGGGGAGGGCGTCTCCTGCTCCCCTCCATCCCTCCCATTCTCTCCCCCAC
CTTTCCCAATTTTAGTTTCATGCAATAAAAAGGCCAAACTTTTTATTCCGTCAAACATGAAGGA
CAAAACTCAGAAATATATTTCAAGTCAACGACCAGAAAAATCTCACCTTCTCCCTGCCCAAAAG
GACCTTTCTGTACATGACACTTTTTGTTGGGTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGG
GATTTTACTGTTGCTGGGATTTTAAATTTGTTTTTTTGGGGGGATTCTTTGGGGGAATTTTTTT
AATGGAAGCTTCTAGCAAGCCCTATGCCCACCCAATCAACCTCATTGCTTTCTTCTTTAATAAA
AGGAAAAAAGGAAAAAGAAAAAAAAGGCCAAAAAAAAAAAAAAAGGAAGAAAAACCCACAAGCC
CTGCTGTCTATCCCCAAGTCCTACCACCAGAAAAGCTAGTCTAGGTGTGCAATATCACACTGAT
GTTGTAGCCATCTAAAAATAATAATAATAAACTGGACAGTTTACAATTGGTGGTTTCTTTCAAA
AGCTGTTTGGGGAGAAGGAACTGAAGTCAACGGTTTCCACGTGGGCCTTTGGGGTTTGTGCTGG
GCAAGGAGATGCAGGTGTCCACTTTGCTCTGGCTGGGCTGGCCATCACAACACACTGGGCCAGA
GGACCCAGAGCCCCCAACTTGCCGTCACCCAACAGAGACCATCGCTGTGACCCAGCGTACACAC
TGTTCCAGGATGGCTGCCTCTTCTCCAAACCTCTCATGCCCAGCCACAGGGGCCTCCAGTCCCT
CGGTCCCCACCGTTTCCTGGCAAGAATCCTGCTGGCTGGGTAGTGGCCCAGGCTGTGTAGGAGA
GGCCCCACCAACAGGATGACTACAATCTGGGCCATAGAACTGACCTCCATGTTCTGGTCCCGAG
CTCCTCACATAGTGCGCACTGGCAGGGCGGGCTGAAGTTGTGTTTTTCTTTTTTTCTCCTGTTT
GTCCTTTTTCAAAGATGGGTGTTGGTTGGAATTGCTCTGTATTTGCTTGGAACTGGATGGACAG
ACTTCAGCATTGCTGTGGGGTGGGGGGAGCACCAGCAACCAAACAGACACTGTTTCTGGTCCTG
TTTTTATTTTCAAAAACTGATGAACCTGATGGTGGAGCCTGTCCCCTCTGAGGAGGGGTGACTT
GGCTGCCCTGGCCTCTCCCCGTGGCAACCATTGTGTCTTGCTCCGGAAGACACTGAGTTCTTTG
TACATTTACCCCCTCTGTGCCCCGCCCATCCTCGTAGCTGGTCTTTGTTTTCTTACCTCCCCTT
TCTGACCCATGTATATCATATTATGTGAGATACCATCTGCCTGACAAAAGACTTGTGCGGATCC
TTGGGAACATTGTAGCTGTTTCTGTGTTTTTTCTTACCTTGTAGTCTGGTTCTGAATTATGAGA
GGAAAAAAAGTAATTATGATACATTGTAGTTTGTGTACGATATATGTTGATAACGTTTTATTAA
AGGGACATCTTTTTTCCGCA

hide sequence

RefSeq Acc Id:

XM_006238533 ⟹ XP_006238595

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,920,150 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,691,380 - 121,828,035 (+)	NCBI
Rnor_6.0	5	126,511,339 - 126,649,830 (+)	NCBI
Rnor_5.0	5	130,364,154 - 130,500,627 (+)	NCBI

Sequence:

show sequence

AGACCAGCGGCGGCGGCGGCAGAGGCAGCGGTGCTGAAGGCGCAGAGGGCGGCGCAGGCGGAGC
CGGGTGGCGGGCGCGCGGGCCGCGAGCAAGCGAGCTGCAGGCTTCGGGCGGGCGGCGGCGCAGC
TCAGGCCGAGCCGGCGCGGGAGGAGTTCCAGGGCGATGGGGCCGCGGCCGGGGCTGACGCTTTG
ACAGCTGGAAAGAGCGCGGAGCCAGCGCCGGGGAGGGAGGGAGCGCGGCGAGCGGAGTGCGAGC
GAGCGGGCGAGCGCCGGGAGGGGGCCGGGAGCAGGGCAGCTCGGGAGACCGGACGGTAGCGGCG
GCGGCGGCGGGCTCGGCGCCCTCTTCTCTGCAAGCCATGTTTGCCAAAGGCAAAGGCTCGGCGG
TGCCCTCGGACGGGCAGGCTCGGGAAAAGTTAGCTTTATATGTCTACGAATATTTACTGCACGT
AGGAGCACAGAAATCTGCACAGACCTTCTTATCAGAGATTCGATGGGAAAAAAACATCACACTG
GGTGAACCGCCTGGGTTTCTGCACTCGTGGTGGTGTGTATTTTGGGACCTTTACTGTGCAGCTC
CTGAAAGGAGAGACACTTGTGAACATTCAAGTGAAGCAAAAGCCTTTCATGATTACAGTGCAGC
AGCTGCCCCAAGTCCTGTGCTTGGCAACATTCCCCCCAATGATGGGATGCCTGGAGGCCCCATC
CCACCAGGTTTCTTTCAGGGTCCTCCGGGGTCACAGCCCTCGCCGCACGCACAGCCTCCACCTC
ACAATCCCAGCAGCATGATGGGACCCCACAGTCAGCCTTTTATGTCACCGAGATATGCAGGCGG
CCCCAGGCCCCCGATCAGAATGGGAAACCAGCCTCCAGGAGGAGTTCCTGGGACACAGCCATTG
CTGCCCAATTCCATGGATCCCACACGACAACAAGGTCACCCCAACATGGGAGGGTCAATGCAGA
GAATGAACCCTCCCCGAGGCATGGGGCCCATGGGGCCTGGCCCACAGAATTACGGCAGCGGCAT
GAGACCACCACCCAACTCCCTCGGCCCCGCCATGCCTGGGATTAACATGGGCCCAGGAGCTGGC
AGACCCTGGCCCAATCCCAACAGTGCTAACTCAGGAAGGCAGCTCCAATCCATGGCTCCTGAAT
CTTCTTTCCAGATCCCGTACTCCTCCTCATCACCCGGAACCTATGTGGGACCCCCTGGTGGTGG
CGGCCCTCCTGGAACCCCCATCATGCCTAGTCCTGCGGATTCAACAAATTCCAGTGACAACATC
TACACAATGATTAATCCTGTGCCGCCTGGAGGCAGCCGGTCTAACTTTCCAATGGGTCCTGGCT
CAGATGGCCCAATGGGCGGCATGGGAGGCATGGAGCCACACCACATGAATGGATCCTTAGGATC
AGGCGACATAGATGGACTTCCAAAAAATTCTCCTAACAACATAAGTGGCATTAGCAACCCTCCA
GGCACCCCTCGGGATGACGGCGAGCTGGGGGGGAACTTCCTCCACTCCTTCCAGAACGACAATT
ATTCTCCAAGCATGACGATGAGTGTGTGATCCCTTCTCCACAACGCTGAGAGCCGGCATTGCAG
GCAGAAGATGCCAGAAATTATGCAAGAAGAAGTGAGGTGTCGATACCAGGAGCTGGGGGAGGGC
GTCTCCTGCTCCCCTCCATCCCTCCCATTCTCTCCCCCACCTTTCCCAATTTTAGTTTCATGCA
ATAAAAAGGCCAAACTTTTTATTCCGTCAAACATGAAGGACAAAACTCAGAAATATATTTCAAG
TCAACGACCAGAAAAATCTCACCTTCTCCCTGCCCAAAAGGACCTTTCTGTACATGACACTTTT
TGTTGGGTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGGGATTTTACTGTTGCTGGGATTTTA
AATTTGTTTTTTTGGGGGGATTCTTTGGGGGAATTTTTTTAATGGAAGCTTCTAGCAAGCCCTA
TGCCCACCCAATCAACCTCATTGCTTTCTTCTTTAATAAAAGGAAAAAAGGAAAAAGAAAAAAA
AGGCCAAAAAAAAAAAAAAAGGAAGAAAAACCCACAAGCCCTGCTGTCTATCCCCAAGTCCTAC
CACCAGAAAAGCTAGTCTAGGTGTGCAATATCACACTGATGTTGTAGCCATCTAAAAATAATAA
TAATAAACTGGACAGTTTACAATTGGTGGTTTCTTTCAAAAGCTGTTTGGGGAGAAGGAACTGA
AGTCAACGGTTTCCACGTGGGCCTTTGGGGTTTGTGCTGGGCAAGGAGATGCAGGTGTCCACTT
TGCTCTGGCTGGGCTGGCCATCACAACACACTGGGCCAGAGGACCCAGAGCCCCCAACTTGCCG
TCACCCAACAGAGACCATCGCTGTGACCCAGCGTACACACTGTTCCAGGATGGCTGCCTCTTCT
CCAAACCTCTCATGCCCAGCCACAGGGGCCTCCAGTCCCTCGGTCCCCACCGTTTCCTGGCAAG
AATCCTGCTGGCTGGGTAGTGGCCCAGGCTGTGTAGGAGAGGCCCCACCAACAGGATGACTACA
ATCTGGGCCATAGAACTGACCTCCATGTTCTGGTCCCGAGCTCCTCACATAGTGCGCACTGGCA
GGGCGGGCTGAAGTTGTGTTTTTCTTTTTTTCTCCTGTTTGTCCTTTTTCAAAGATGGGTGTTG
GTTGGAATTGCTCTGTATTTGCTTGGAACTGGATGGACAGACTTCAGCATTGCTGTGGGGTGGG
GGGAGCACCAGCAACCAAACAGACACTGTTTCTGGTCCTGTTTTTATTTTCAAAAACTGATGAA
CCTGATGGTGGAGCCTGTCCCCTCTGAGGAGGGGTGACTTGGCTGCCCTGGCCTCTCCCCGTGG
CAACCATTGTGTCTTGCTCCGGAAGACACTGAGTTCTTTGTACATTTACCCCCTCTGTGCCCCG
CCCATCCTCGTAGCTGGTCTTTGTTTTCTTACCTCCCCTTTCTGACCCATGTATATCATATTAT
GTGAGATACCATCTGCCTGACAAAAGACTTGTGCGGATCCTTGGGAACATTGTAGCTGTTTCTG
TGTTTTTTCTTACCTTGTAGTCTGGTTCTGAATTATGAGAGGAAAAAAAGTAATTATGATACAT
TGTAGTTTGTGTACGATATATGTTGATAACGTTTTATTAAAGGGACATCTTTTTTCCGCA

hide sequence

RefSeq Acc Id:

XM_006238534 ⟹ XP_006238596

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,920,150 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,691,380 - 121,828,035 (+)	NCBI
Rnor_6.0	5	126,511,339 - 126,649,830 (+)	NCBI
Rnor_5.0	5	130,364,154 - 130,500,627 (+)	NCBI

Sequence:

show sequence

AGACCAGCGGCGGCGGCGGCAGAGGCAGCGGTGCTGAAGGCGCAGAGGGCGGCGCAGGCGGAGC
CGGGTGGCGGGCGCGCGGGCCGCGAGCAAGCGAGCTGCAGGCTTCGGGCGGGCGGCGGCGCAGC
TCAGGCCGAGCCGGCGCGGGAGGAGTTCCAGGGCGATGGGGCCGCGGCCGGGGCTGACGCTTTG
ACAGCTGGAAAGAGCGCGGAGCCAGCGCCGGGGAGGGAGGGAGCGCGGCGAGCGGAGTGCGAGC
GAGCGGGCGAGCGCCGGGAGGGGGCCGGGAGCAGGGCAGCTCGGGAGACCGGACGGTAGCGGCG
GCGGCGGCGGGCTCGGCGCCCTCTTCTCTGCAAGCCATGTTTGCCAAAGGCAAAGGCTCGGCGG
TGCCCTCGGACGGGCAGGCTCGGGAAAAGTTAGCTTTATATGTCTACGAATATTTACTGCACGT
AGGAGCACAGAAATCTGCACAGACCTTCTTATCAGAGATTCGATGGGAAAAAAACATCACACTG
GGTGAACCGCCTGGGTTTCTGCACTCGTGGTGGTGTGTATTTTGGGACCTTTACTGTGCAGCTC
CTGAAAGGAGAGACACTTGTGAACATTCAAGTGAAGCAAAAGCCTTTCATGATTACAGTGCAGC
AGCTGCCCCAAGTCCTGTGCTTGGCAACATTCCCCCCAATGATGGGATGCCTGGAGGCCCCATC
CCACCAGGTTTCTTTCAGGGTCCTCCGGGGTCACAGCCCTCGCCGCACGCACAGCCTCCACCTC
ACAATCCCAGCAGCATGATGGGACCCCACAGTCAGCCTTTTATGTCACCGAGATATGCAGGCGG
CCCCAGGCCCCCGATCAGAATGGGAAACCAGCCTCCAGGAGGAGTTCCTGGGACACAGCCATTG
CTGCCCAATTCCATGGATCCCACACGACAACAAGGTCACCCCAACATGGGAGGGTCAATGCAGA
GAATGAACCCTCCCCGAGGCATGGGGCCCATGGGGCCTGGCCCACAGACTGACCCTTGGTTATC
GTTGCAGAATTACGGCAGCGGCATGAGACCACCACCCAACTCCCTCGGCCCCGCCATGCCTGGG
ATTAACATGGGCCCAGGAGCTGGCAGACCCTGGCCCAATCCCAACAGTGCTAACTCAATCCCGT
ACTCCTCCTCATCACCCGGAACCTATGTGGGACCCCCTGGTGGTGGCGGCCCTCCTGGAACCCC
CATCATGCCTAGTCCTGCGGATTCAACAAATTCCAGTGACAACATCTACACAATGATTAATCCT
GTGCCGCCTGGAGGCAGCCGGTCTAACTTTCCAATGGGTCCTGGCTCAGATGGCCCAATGGGCG
GCATGGGAGGCATGGAGCCACACCACATGAATGGATCCTTAGGATCAGGCGACATAGATGGACT
TCCAAAAAATTCTCCTAACAACATAAGTGGCATTAGCAACCCTCCAGGCACCCCTCGGGATGAC
GGCGAGCTGGGGGGGAACTTCCTCCACTCCTTCCAGAACGACAATTATTCTCCAAGCATGACGA
TGAGTGTGTGATCCCTTCTCCACAACGCTGAGAGCCGGCATTGCAGGCAGAAGATGCCAGAAAT
TATGCAAGAAGAAGTGAGGTGTCGATACCAGGAGCTGGGGGAGGGCGTCTCCTGCTCCCCTCCA
TCCCTCCCATTCTCTCCCCCACCTTTCCCAATTTTAGTTTCATGCAATAAAAAGGCCAAACTTT
TTATTCCGTCAAACATGAAGGACAAAACTCAGAAATATATTTCAAGTCAACGACCAGAAAAATC
TCACCTTCTCCCTGCCCAAAAGGACCTTTCTGTACATGACACTTTTTGTTGGGTTTTTTTGTTT
GTTTGTTTGTTTGTTTGTTTGGGATTTTACTGTTGCTGGGATTTTAAATTTGTTTTTTTGGGGG
GATTCTTTGGGGGAATTTTTTTAATGGAAGCTTCTAGCAAGCCCTATGCCCACCCAATCAACCT
CATTGCTTTCTTCTTTAATAAAAGGAAAAAAGGAAAAAGAAAAAAAAGGCCAAAAAAAAAAAAA
AAGGAAGAAAAACCCACAAGCCCTGCTGTCTATCCCCAAGTCCTACCACCAGAAAAGCTAGTCT
AGGTGTGCAATATCACACTGATGTTGTAGCCATCTAAAAATAATAATAATAAACTGGACAGTTT
ACAATTGGTGGTTTCTTTCAAAAGCTGTTTGGGGAGAAGGAACTGAAGTCAACGGTTTCCACGT
GGGCCTTTGGGGTTTGTGCTGGGCAAGGAGATGCAGGTGTCCACTTTGCTCTGGCTGGGCTGGC
CATCACAACACACTGGGCCAGAGGACCCAGAGCCCCCAACTTGCCGTCACCCAACAGAGACCAT
CGCTGTGACCCAGCGTACACACTGTTCCAGGATGGCTGCCTCTTCTCCAAACCTCTCATGCCCA
GCCACAGGGGCCTCCAGTCCCTCGGTCCCCACCGTTTCCTGGCAAGAATCCTGCTGGCTGGGTA
GTGGCCCAGGCTGTGTAGGAGAGGCCCCACCAACAGGATGACTACAATCTGGGCCATAGAACTG
ACCTCCATGTTCTGGTCCCGAGCTCCTCACATAGTGCGCACTGGCAGGGCGGGCTGAAGTTGTG
TTTTTCTTTTTTTCTCCTGTTTGTCCTTTTTCAAAGATGGGTGTTGGTTGGAATTGCTCTGTAT
TTGCTTGGAACTGGATGGACAGACTTCAGCATTGCTGTGGGGTGGGGGGAGCACCAGCAACCAA
ACAGACACTGTTTCTGGTCCTGTTTTTATTTTCAAAAACTGATGAACCTGATGGTGGAGCCTGT
CCCCTCTGAGGAGGGGTGACTTGGCTGCCCTGGCCTCTCCCCGTGGCAACCATTGTGTCTTGCT
CCGGAAGACACTGAGTTCTTTGTACATTTACCCCCTCTGTGCCCCGCCCATCCTCGTAGCTGGT
CTTTGTTTTCTTACCTCCCCTTTCTGACCCATGTATATCATATTATGTGAGATACCATCTGCCT
GACAAAAGACTTGTGCGGATCCTTGGGAACATTGTAGCTGTTTCTGTGTTTTTTCTTACCTTGT
AGTCTGGTTCTGAATTATGAGAGGAAAAAAAGTAATTATGATACATTGTAGTTTGTGTACGATA
TATGTTGATAACGTTTTATTAAAGGGACATCTTTTTTCCGCA

hide sequence

RefSeq Acc Id:

XM_006238535 ⟹ XP_006238597

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,920,154 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,691,382 - 121,828,031 (+)	NCBI
Rnor_6.0	5	126,511,339 - 126,649,830 (+)	NCBI
Rnor_5.0	5	130,364,154 - 130,500,627 (+)	NCBI

Sequence:

show sequence

AGACCAGCGGCGGCGGCGGCAGAGGCAGCGGTGCTGAAGGCGCAGAGGGCGGCGCAGGCGGAGC
CGGGTGGCGGGCGCGCGGGCCGCGAGCAAGCGAGCTGCAGGCTTCGGGCGGGCGGCGGCGCAGC
TCAGGCCGAGCCGGCGCGGGAGGAGTTCCAGGGCGATGGGGCCGCGGCCGGGGCTGACGCTTTG
ACAGCTGGAAAGAGCGCGGAGCCAGCGCCGGGGAGGGAGGGAGCGCGGCGAGCGGAGTGCGAGC
GAGCGGGCGAGCGCCGGGAGGGGGCCGGGAGCAGGGCAGCTCGGGAGACCGGACGGTAGCGGCG
GCGGCGGCGGGCTCGGCGCCCTCTTCTCTGCAAGCCATGTTTGCCAAAGGCAAAGGCTCGGCGG
TGCCCTCGGACGGGCAGGCTCGGGAAAAGTTAGCTTTATATGTCTACGAATATTTACTGCACGT
AGGAGCACAGAAATCTGCACAGACCTTCTTATCAGAGATTCGATGGGAAAAAAACATCACACTG
GGTGAACCGCCTGGGTTTCTGCACTCGTGGTGGTGTGTATTTTGGGACCTTTACTGTGCAGCTC
CTGAAAGGAGAGACACTTGTGAACATTCAAGTGAAGCAAAAGCCTTTCATGATTACAGTGCAGC
AGCTGCCCCAAGTCCTGTGCTTGGCAACATTCCCCCCAATGATGGGATGCCTGGAGGCCCCATC
CCACCAGGTTTCTTTCAGGGTCCTCCGGGGTCACAGCCCTCGCCGCACGCACAGCCTCCACCTC
ACAATCCCAGCAGCATGATGGGACCCCACAGTCAGCCTTTTATGTCACCGAGATATGCAGGCGG
CCCCAGGCCCCCGATCAGAATGGGAAACCAGCCTCCAGGAGGAGTTCCTGGGACACAGCCATTG
CTGCCCAATTCCATGGATCCCACACGACAACAAGGTCACCCCAACATGGGAGGGTCAATGCAGA
GAATGAACCCTCCCCGAGGCATGGGGCCCATGGGGCCTGGCCCACAGAATTACGGCAGCGGCAT
GAGACCACCACCCAACTCCCTCGGCCCCGCCATGCCTGGGATTAACATGGGCCCAGGAGCTGGC
AGACCCTGGCCCAATCCCAACAGTGCTAACTCAATCCCGTACTCCTCCTCATCACCCGGAACCT
ATGTGGGACCCCCTGGTGGTGGCGGCCCTCCTGGAACCCCCATCATGCCTAGTCCTGCGGATTC
AACAAATTCCAGTGACAACATCTACACAATGATTAATCCTGTGCCGCCTGGAGGCAGCCGGTCT
AACTTTCCAATGGGTCCTGGCTCAGATGGCCCAATGGGCGGCATGGGAGGCATGGAGCCACACC
ACATGAATGGATCCTTAGGATCAGGCGACATAGATGGACTTCCAAAAAATTCTCCTAACAACAT
AAGTGGCATTAGCAACCCTCCAGGCACCCCTCGGGATGACGGCGAGCTGGGGGGGAACTTCCTC
CACTCCTTCCAGAACGACAATTATTCTCCAAGCATGACGATGAGTGTGTGATCCCTTCTCCACA
ACGCTGAGAGCCGGCATTGCAGGCAGAAGATGCCAGAAATTATGCAAGAAGAAGTGAGGTGTCG
ATACCAGGAGCTGGGGGAGGGCGTCTCCTGCTCCCCTCCATCCCTCCCATTCTCTCCCCCACCT
TTCCCAATTTTAGTTTCATGCAATAAAAAGGCCAAACTTTTTATTCCGTCAAACATGAAGGACA
AAACTCAGAAATATATTTCAAGTCAACGACCAGAAAAATCTCACCTTCTCCCTGCCCAAAAGGA
CCTTTCTGTACATGACACTTTTTGTTGGGTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGGGA
TTTTACTGTTGCTGGGATTTTAAATTTGTTTTTTTGGGGGGATTCTTTGGGGGAATTTTTTTAA
TGGAAGCTTCTAGCAAGCCCTATGCCCACCCAATCAACCTCATTGCTTTCTTCTTTAATAAAAG
GAAAAAAGGAAAAAGAAAAAAAAGGCCAAAAAAAAAAAAAAAGGAAGAAAAACCCACAAGCCCT
GCTGTCTATCCCCAAGTCCTACCACCAGAAAAGCTAGTCTAGGTGTGCAATATCACACTGATGT
TGTAGCCATCTAAAAATAATAATAATAAACTGGACAGTTTACAATTGGTGGTTTCTTTCAAAAG
CTGTTTGGGGAGAAGGAACTGAAGTCAACGGTTTCCACGTGGGCCTTTGGGGTTTGTGCTGGGC
AAGGAGATGCAGGTGTCCACTTTGCTCTGGCTGGGCTGGCCATCACAACACACTGGGCCAGAGG
ACCCAGAGCCCCCAACTTGCCGTCACCCAACAGAGACCATCGCTGTGACCCAGCGTACACACTG
TTCCAGGATGGCTGCCTCTTCTCCAAACCTCTCATGCCCAGCCACAGGGGCCTCCAGTCCCTCG
GTCCCCACCGTTTCCTGGCAAGAATCCTGCTGGCTGGGTAGTGGCCCAGGCTGTGTAGGAGAGG
CCCCACCAACAGGATGACTACAATCTGGGCCATAGAACTGACCTCCATGTTCTGGTCCCGAGCT
CCTCACATAGTGCGCACTGGCAGGGCGGGCTGAAGTTGTGTTTTTCTTTTTTTCTCCTGTTTGT
CCTTTTTCAAAGATGGGTGTTGGTTGGAATTGCTCTGTATTTGCTTGGAACTGGATGGACAGAC
TTCAGCATTGCTGTGGGGTGGGGGGAGCACCAGCAACCAAACAGACACTGTTTCTGGTCCTGTT
TTTATTTTCAAAAACTGATGAACCTGATGGTGGAGCCTGTCCCCTCTGAGGAGGGGTGACTTGG
CTGCCCTGGCCTCTCCCCGTGGCAACCATTGTGTCTTGCTCCGGAAGACACTGAGTTCTTTGTA
CATTTACCCCCTCTGTGCCCCGCCCATCCTCGTAGCTGGTCTTTGTTTTCTTACCTCCCCTTTC
TGACCCATGTATATCATATTATGTGAGATACCATCTGCCTGACAAAAGACTTGTGCGGATCCTT
GGGAACATTGTAGCTGTTTCTGTGTTTTTTCTTACCTTGTAGTCTGGTTCTGAATTATGAGAGG
AAAAAAAGTAATTATGATACATTGTAGTTTGTGTACGATATATGTTGATAACGTTTTATTAAAG
GGACATCTTTTTTCCGCA

hide sequence

RefSeq Acc Id:

XM_006238536 ⟹ XP_006238598

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,920,151 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,691,380 - 121,828,035 (+)	NCBI
Rnor_6.0	5	126,511,339 - 126,649,830 (+)	NCBI
Rnor_5.0	5	130,364,154 - 130,500,627 (+)	NCBI

Sequence:

show sequence

AGACCAGCGGCGGCGGCGGCAGAGGCAGCGGTGCTGAAGGCGCAGAGGGCGGCGCAGGCGGAGC
CGGGTGGCGGGCGCGCGGGCCGCGAGCAAGCGAGCTGCAGGCTTCGGGCGGGCGGCGGCGCAGC
TCAGGCCGAGCCGGCGCGGGAGGAGTTCCAGGGCGATGGGGCCGCGGCCGGGGCTGACGCTTTG
ACAGCTGGAAAGAGCGCGGAGCCAGCGCCGGGGAGGGAGGGAGCGCGGCGAGCGGAGTGCGAGC
GAGCGGGCGAGCGCCGGGAGGGGGCCGGGAGCAGGGCAGCTCGGGAGACCGGACGGTAGCGGCG
GCGGCGGCGGGCTCGGCGCCCTCTTCTCTGCAAGCCATGTTTGCCAAAGGCAAAGGCTCGGCGG
TGCCCTCGGACGGGCAGGCTCGGGAAAAGTTAGCTTTATATGTCTACGAATATTTACTGCACGT
AGGAGCACAGAAATCTGCACAGACCTTCTTATCAGAGATTCGATGGGAAAAAAACATCACACTG
GGTGAACCGCCTGGGTTTCTGCACTCGTGGTGGTGTGTATTTTGGGACCTTTACTGTGCAGCTC
CTGAAAGGAGAGACACTTGTGAACATTCAAGTGAAGCAAAAGCCTTTCATGATTACAGTGCAGC
AGCTGCCCCAAGTCCTGTGCTTGGCAACATTCCCCCCAATGATGGGATGCCTGGAGGCCCCATC
CCACCAGGTTTCTTTCAGCCTTTTATGTCACCGAGATATGCAGGCGGCCCCAGGCCCCCGATCA
GAATGGGAAACCAGCCTCCAGGAGGAGTTCCTGGGACACAGCCATTGCTGCCCAATTCCATGGA
TCCCACACGACAACAAGGTCACCCCAACATGGGAGGGTCAATGCAGAGAATGAACCCTCCCCGA
GGCATGGGGCCCATGGGGCCTGGCCCACAGACTGACCCTTGGTTATCGTTGCAGAATTACGGCA
GCGGCATGAGACCACCACCCAACTCCCTCGGCCCCGCCATGCCTGGGATTAACATGGGCCCAGG
AGCTGGCAGACCCTGGCCCAATCCCAACAGTGCTAACTCAGGAAGGCAGCTCCAATCCATGGCT
CCTGAATCTTCTTTCCAGATCCCGTACTCCTCCTCATCACCCGGAACCTATGTGGGACCCCCTG
GTGGTGGCGGCCCTCCTGGAACCCCCATCATGCCTAGTCCTGCGGATTCAACAAATTCCAGTGA
CAACATCTACACAATGATTAATCCTGTGCCGCCTGGAGGCAGCCGGTCTAACTTTCCAATGGGT
CCTGGCTCAGATGGCCCAATGGGCGGCATGGGAGGCATGGAGCCACACCACATGAATGGATCCT
TAGGATCAGGCGACATAGATGGACTTCCAAAAAATTCTCCTAACAACATAAGTGGCATTAGCAA
CCCTCCAGGCACCCCTCGGGATGACGGCGAGCTGGGGGGGAACTTCCTCCACTCCTTCCAGAAC
GACAATTATTCTCCAAGCATGACGATGAGTGTGTGATCCCTTCTCCACAACGCTGAGAGCCGGC
ATTGCAGGCAGAAGATGCCAGAAATTATGCAAGAAGAAGTGAGGTGTCGATACCAGGAGCTGGG
GGAGGGCGTCTCCTGCTCCCCTCCATCCCTCCCATTCTCTCCCCCACCTTTCCCAATTTTAGTT
TCATGCAATAAAAAGGCCAAACTTTTTATTCCGTCAAACATGAAGGACAAAACTCAGAAATATA
TTTCAAGTCAACGACCAGAAAAATCTCACCTTCTCCCTGCCCAAAAGGACCTTTCTGTACATGA
CACTTTTTGTTGGGTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGGGATTTTACTGTTGCTGG
GATTTTAAATTTGTTTTTTTGGGGGGATTCTTTGGGGGAATTTTTTTAATGGAAGCTTCTAGCA
AGCCCTATGCCCACCCAATCAACCTCATTGCTTTCTTCTTTAATAAAAGGAAAAAAGGAAAAAG
AAAAAAAAGGCCAAAAAAAAAAAAAAAGGAAGAAAAACCCACAAGCCCTGCTGTCTATCCCCAA
GTCCTACCACCAGAAAAGCTAGTCTAGGTGTGCAATATCACACTGATGTTGTAGCCATCTAAAA
ATAATAATAATAAACTGGACAGTTTACAATTGGTGGTTTCTTTCAAAAGCTGTTTGGGGAGAAG
GAACTGAAGTCAACGGTTTCCACGTGGGCCTTTGGGGTTTGTGCTGGGCAAGGAGATGCAGGTG
TCCACTTTGCTCTGGCTGGGCTGGCCATCACAACACACTGGGCCAGAGGACCCAGAGCCCCCAA
CTTGCCGTCACCCAACAGAGACCATCGCTGTGACCCAGCGTACACACTGTTCCAGGATGGCTGC
CTCTTCTCCAAACCTCTCATGCCCAGCCACAGGGGCCTCCAGTCCCTCGGTCCCCACCGTTTCC
TGGCAAGAATCCTGCTGGCTGGGTAGTGGCCCAGGCTGTGTAGGAGAGGCCCCACCAACAGGAT
GACTACAATCTGGGCCATAGAACTGACCTCCATGTTCTGGTCCCGAGCTCCTCACATAGTGCGC
ACTGGCAGGGCGGGCTGAAGTTGTGTTTTTCTTTTTTTCTCCTGTTTGTCCTTTTTCAAAGATG
GGTGTTGGTTGGAATTGCTCTGTATTTGCTTGGAACTGGATGGACAGACTTCAGCATTGCTGTG
GGGTGGGGGGAGCACCAGCAACCAAACAGACACTGTTTCTGGTCCTGTTTTTATTTTCAAAAAC
TGATGAACCTGATGGTGGAGCCTGTCCCCTCTGAGGAGGGGTGACTTGGCTGCCCTGGCCTCTC
CCCGTGGCAACCATTGTGTCTTGCTCCGGAAGACACTGAGTTCTTTGTACATTTACCCCCTCTG
TGCCCCGCCCATCCTCGTAGCTGGTCTTTGTTTTCTTACCTCCCCTTTCTGACCCATGTATATC
ATATTATGTGAGATACCATCTGCCTGACAAAAGACTTGTGCGGATCCTTGGGAACATTGTAGCT
GTTTCTGTGTTTTTTCTTACCTTGTAGTCTGGTTCTGAATTATGAGAGGAAAAAAAGTAATTAT
GATACATTGTAGTTTGTGTACGATATATGTTGATAACGTTTTATTAAAGGGACATCTTTTTTCC
GCA

hide sequence

RefSeq Acc Id:

XM_006238537 ⟹ XP_006238599

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,920,154 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,691,382 - 121,828,035 (+)	NCBI
Rnor_6.0	5	126,511,339 - 126,649,830 (+)	NCBI
Rnor_5.0	5	130,364,154 - 130,500,627 (+)	NCBI

Sequence:

show sequence

AGACCAGCGGCGGCGGCGGCAGAGGCAGCGGTGCTGAAGGCGCAGAGGGCGGCGCAGGCGGAGC
CGGGTGGCGGGCGCGCGGGCCGCGAGCAAGCGAGCTGCAGGCTTCGGGCGGGCGGCGGCGCAGC
TCAGGCCGAGCCGGCGCGGGAGGAGTTCCAGGGCGATGGGGCCGCGGCCGGGGCTGACGCTTTG
ACAGCTGGAAAGAGCGCGGAGCCAGCGCCGGGGAGGGAGGGAGCGCGGCGAGCGGAGTGCGAGC
GAGCGGGCGAGCGCCGGGAGGGGGCCGGGAGCAGGGCAGCTCGGGAGACCGGACGGTAGCGGCG
GCGGCGGCGGGCTCGGCGCCCTCTTCTCTGCAAGCCATGTTTGCCAAAGGCAAAGGCTCGGCGG
TGCCCTCGGACGGGCAGGCTCGGGAAAAGTTAGCTTTATATGTCTACGAATATTTACTGCACGT
AGGAGCACAGAAATCTGCACAGACCTTCTTATCAGAGATTCGATGGGAAAAAAACATCACACTG
GGTGAACCGCCTGGGTTTCTGCACTCGTGGTGGTGTGTATTTTGGGACCTTTACTGTGCAGCTC
CTGAAAGGAGAGACACTTGTGAACATTCAAGTGAAGCAAAAGCCTTTCATGATTACAGTGCAGC
AGCTGCCCCAAGTCCTGTGCTTGGCAACATTCCCCCCAATGATGGGATGCCTGGAGGCCCCATC
CCACCAGGTTTCTTTCAGCCTTTTATGTCACCGAGATATGCAGGCGGCCCCAGGCCCCCGATCA
GAATGGGAAACCAGCCTCCAGGAGGAGTTCCTGGGACACAGCCATTGCTGCCCAATTCCATGGA
TCCCACACGACAACAAGGTCACCCCAACATGGGAGGGTCAATGCAGAGAATGAACCCTCCCCGA
GGCATGGGGCCCATGGGGCCTGGCCCACAGAATTACGGCAGCGGCATGAGACCACCACCCAACT
CCCTCGGCCCCGCCATGCCTGGGATTAACATGGGCCCAGGAGCTGGCAGACCCTGGCCCAATCC
CAACAGTGCTAACTCAGGAAGGCAGCTCCAATCCATGGCTCCTGAATCTTCTTTCCAGATCCCG
TACTCCTCCTCATCACCCGGAACCTATGTGGGACCCCCTGGTGGTGGCGGCCCTCCTGGAACCC
CCATCATGCCTAGTCCTGCGGATTCAACAAATTCCAGTGACAACATCTACACAATGATTAATCC
TGTGCCGCCTGGAGGCAGCCGGTCTAACTTTCCAATGGGTCCTGGCTCAGATGGCCCAATGGGC
GGCATGGGAGGCATGGAGCCACACCACATGAATGGATCCTTAGGATCAGGCGACATAGATGGAC
TTCCAAAAAATTCTCCTAACAACATAAGTGGCATTAGCAACCCTCCAGGCACCCCTCGGGATGA
CGGCGAGCTGGGGGGGAACTTCCTCCACTCCTTCCAGAACGACAATTATTCTCCAAGCATGACG
ATGAGTGTGTGATCCCTTCTCCACAACGCTGAGAGCCGGCATTGCAGGCAGAAGATGCCAGAAA
TTATGCAAGAAGAAGTGAGGTGTCGATACCAGGAGCTGGGGGAGGGCGTCTCCTGCTCCCCTCC
ATCCCTCCCATTCTCTCCCCCACCTTTCCCAATTTTAGTTTCATGCAATAAAAAGGCCAAACTT
TTTATTCCGTCAAACATGAAGGACAAAACTCAGAAATATATTTCAAGTCAACGACCAGAAAAAT
CTCACCTTCTCCCTGCCCAAAAGGACCTTTCTGTACATGACACTTTTTGTTGGGTTTTTTTGTT
TGTTTGTTTGTTTGTTTGTTTGGGATTTTACTGTTGCTGGGATTTTAAATTTGTTTTTTTGGGG
GGATTCTTTGGGGGAATTTTTTTAATGGAAGCTTCTAGCAAGCCCTATGCCCACCCAATCAACC
TCATTGCTTTCTTCTTTAATAAAAGGAAAAAAGGAAAAAGAAAAAAAAGGCCAAAAAAAAAAAA
AAAGGAAGAAAAACCCACAAGCCCTGCTGTCTATCCCCAAGTCCTACCACCAGAAAAGCTAGTC
TAGGTGTGCAATATCACACTGATGTTGTAGCCATCTAAAAATAATAATAATAAACTGGACAGTT
TACAATTGGTGGTTTCTTTCAAAAGCTGTTTGGGGAGAAGGAACTGAAGTCAACGGTTTCCACG
TGGGCCTTTGGGGTTTGTGCTGGGCAAGGAGATGCAGGTGTCCACTTTGCTCTGGCTGGGCTGG
CCATCACAACACACTGGGCCAGAGGACCCAGAGCCCCCAACTTGCCGTCACCCAACAGAGACCA
TCGCTGTGACCCAGCGTACACACTGTTCCAGGATGGCTGCCTCTTCTCCAAACCTCTCATGCCC
AGCCACAGGGGCCTCCAGTCCCTCGGTCCCCACCGTTTCCTGGCAAGAATCCTGCTGGCTGGGT
AGTGGCCCAGGCTGTGTAGGAGAGGCCCCACCAACAGGATGACTACAATCTGGGCCATAGAACT
GACCTCCATGTTCTGGTCCCGAGCTCCTCACATAGTGCGCACTGGCAGGGCGGGCTGAAGTTGT
GTTTTTCTTTTTTTCTCCTGTTTGTCCTTTTTCAAAGATGGGTGTTGGTTGGAATTGCTCTGTA
TTTGCTTGGAACTGGATGGACAGACTTCAGCATTGCTGTGGGGTGGGGGGAGCACCAGCAACCA
AACAGACACTGTTTCTGGTCCTGTTTTTATTTTCAAAAACTGATGAACCTGATGGTGGAGCCTG
TCCCCTCTGAGGAGGGGTGACTTGGCTGCCCTGGCCTCTCCCCGTGGCAACCATTGTGTCTTGC
TCCGGAAGACACTGAGTTCTTTGTACATTTACCCCCTCTGTGCCCCGCCCATCCTCGTAGCTGG
TCTTTGTTTTCTTACCTCCCCTTTCTGACCCATGTATATCATATTATGTGAGATACCATCTGCC
TGACAAAAGACTTGTGCGGATCCTTGGGAACATTGTAGCTGTTTCTGTGTTTTTTCTTACCTTG
TAGTCTGGTTCTGAATTATGAGAGGAAAAAAAGTAATTATGATACATTGTAGTTTGTGTACGAT
ATATGTTGATAACGTTTTATTAAAGGGACATCTTTTTTCCGCA

hide sequence

RefSeq Acc Id:

XM_006238538 ⟹ XP_006238600

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,920,155 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,691,382 - 121,828,035 (+)	NCBI
Rnor_6.0	5	126,511,339 - 126,649,830 (+)	NCBI
Rnor_5.0	5	130,364,154 - 130,500,627 (+)	NCBI

Sequence:

show sequence

AGACCAGCGGCGGCGGCGGCAGAGGCAGCGGTGCTGAAGGCGCAGAGGGCGGCGCAGGCGGAGC
CGGGTGGCGGGCGCGCGGGCCGCGAGCAAGCGAGCTGCAGGCTTCGGGCGGGCGGCGGCGCAGC
TCAGGCCGAGCCGGCGCGGGAGGAGTTCCAGGGCGATGGGGCCGCGGCCGGGGCTGACGCTTTG
ACAGCTGGAAAGAGCGCGGAGCCAGCGCCGGGGAGGGAGGGAGCGCGGCGAGCGGAGTGCGAGC
GAGCGGGCGAGCGCCGGGAGGGGGCCGGGAGCAGGGCAGCTCGGGAGACCGGACGGTAGCGGCG
GCGGCGGCGGGCTCGGCGCCCTCTTCTCTGCAAGCCATGTTTGCCAAAGGCAAAGGCTCGGCGG
TGCCCTCGGACGGGCAGGCTCGGGAAAAGTTAGCTTTATATGTCTACGAATATTTACTGCACGT
AGGAGCACAGAAATCTGCACAGACCTTCTTATCAGAGATTCGATGGGAAAAAAACATCACACTG
GGTGAACCGCCTGGGTTTCTGCACTCGTGGTGGTGTGTATTTTGGGACCTTTACTGTGCAGCTC
CTGAAAGGAGAGACACTTGTGAACATTCAAGTGAAGCAAAAGCCTTTCATGATTACAGTGCAGC
AGCTGCCCCAAGTCCTGTGCTTGGCAACATTCCCCCCAATGATGGGATGCCTGGAGGCCCCATC
CCACCAGGTTTCTTTCAGCCTTTTATGTCACCGAGATATGCAGGCGGCCCCAGGCCCCCGATCA
GAATGGGAAACCAGCCTCCAGGAGGAGTTCCTGGGACACAGCCATTGCTGCCCAATTCCATGGA
TCCCACACGACAACAAGGTCACCCCAACATGGGAGGGTCAATGCAGAGAATGAACCCTCCCCGA
GGCATGGGGCCCATGGGGCCTGGCCCACAGACTGACCCTTGGTTATCGTTGCAGAATTACGGCA
GCGGCATGAGACCACCACCCAACTCCCTCGGCCCCGCCATGCCTGGGATTAACATGGGCCCAGG
AGCTGGCAGACCCTGGCCCAATCCCAACAGTGCTAACTCAATCCCGTACTCCTCCTCATCACCC
GGAACCTATGTGGGACCCCCTGGTGGTGGCGGCCCTCCTGGAACCCCCATCATGCCTAGTCCTG
CGGATTCAACAAATTCCAGTGACAACATCTACACAATGATTAATCCTGTGCCGCCTGGAGGCAG
CCGGTCTAACTTTCCAATGGGTCCTGGCTCAGATGGCCCAATGGGCGGCATGGGAGGCATGGAG
CCACACCACATGAATGGATCCTTAGGATCAGGCGACATAGATGGACTTCCAAAAAATTCTCCTA
ACAACATAAGTGGCATTAGCAACCCTCCAGGCACCCCTCGGGATGACGGCGAGCTGGGGGGGAA
CTTCCTCCACTCCTTCCAGAACGACAATTATTCTCCAAGCATGACGATGAGTGTGTGATCCCTT
CTCCACAACGCTGAGAGCCGGCATTGCAGGCAGAAGATGCCAGAAATTATGCAAGAAGAAGTGA
GGTGTCGATACCAGGAGCTGGGGGAGGGCGTCTCCTGCTCCCCTCCATCCCTCCCATTCTCTCC
CCCACCTTTCCCAATTTTAGTTTCATGCAATAAAAAGGCCAAACTTTTTATTCCGTCAAACATG
AAGGACAAAACTCAGAAATATATTTCAAGTCAACGACCAGAAAAATCTCACCTTCTCCCTGCCC
AAAAGGACCTTTCTGTACATGACACTTTTTGTTGGGTTTTTTTGTTTGTTTGTTTGTTTGTTTG
TTTGGGATTTTACTGTTGCTGGGATTTTAAATTTGTTTTTTTGGGGGGATTCTTTGGGGGAATT
TTTTTAATGGAAGCTTCTAGCAAGCCCTATGCCCACCCAATCAACCTCATTGCTTTCTTCTTTA
ATAAAAGGAAAAAAGGAAAAAGAAAAAAAAGGCCAAAAAAAAAAAAAAAGGAAGAAAAACCCAC
AAGCCCTGCTGTCTATCCCCAAGTCCTACCACCAGAAAAGCTAGTCTAGGTGTGCAATATCACA
CTGATGTTGTAGCCATCTAAAAATAATAATAATAAACTGGACAGTTTACAATTGGTGGTTTCTT
TCAAAAGCTGTTTGGGGAGAAGGAACTGAAGTCAACGGTTTCCACGTGGGCCTTTGGGGTTTGT
GCTGGGCAAGGAGATGCAGGTGTCCACTTTGCTCTGGCTGGGCTGGCCATCACAACACACTGGG
CCAGAGGACCCAGAGCCCCCAACTTGCCGTCACCCAACAGAGACCATCGCTGTGACCCAGCGTA
CACACTGTTCCAGGATGGCTGCCTCTTCTCCAAACCTCTCATGCCCAGCCACAGGGGCCTCCAG
TCCCTCGGTCCCCACCGTTTCCTGGCAAGAATCCTGCTGGCTGGGTAGTGGCCCAGGCTGTGTA
GGAGAGGCCCCACCAACAGGATGACTACAATCTGGGCCATAGAACTGACCTCCATGTTCTGGTC
CCGAGCTCCTCACATAGTGCGCACTGGCAGGGCGGGCTGAAGTTGTGTTTTTCTTTTTTTCTCC
TGTTTGTCCTTTTTCAAAGATGGGTGTTGGTTGGAATTGCTCTGTATTTGCTTGGAACTGGATG
GACAGACTTCAGCATTGCTGTGGGGTGGGGGGAGCACCAGCAACCAAACAGACACTGTTTCTGG
TCCTGTTTTTATTTTCAAAAACTGATGAACCTGATGGTGGAGCCTGTCCCCTCTGAGGAGGGGT
GACTTGGCTGCCCTGGCCTCTCCCCGTGGCAACCATTGTGTCTTGCTCCGGAAGACACTGAGTT
CTTTGTACATTTACCCCCTCTGTGCCCCGCCCATCCTCGTAGCTGGTCTTTGTTTTCTTACCTC
CCCTTTCTGACCCATGTATATCATATTATGTGAGATACCATCTGCCTGACAAAAGACTTGTGCG
GATCCTTGGGAACATTGTAGCTGTTTCTGTGTTTTTTCTTACCTTGTAGTCTGGTTCTGAATTA
TGAGAGGAAAAAAAGTAATTATGATACATTGTAGTTTGTGTACGATATATGTTGATAACGTTTT
ATTAAAGGGACATCTTTTTTCCGCA

hide sequence

RefSeq Acc Id:

XM_017593663 ⟹ XP_017449152

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,995,585 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,765,459 - 121,828,035 (+)	NCBI
Rnor_6.0	5	126,585,536 - 126,649,830 (+)	NCBI

Sequence:

show sequence

AAAAAAGAAAAAAGAAAAAAAGAACGGGGTCACAGGTAAACCACATGTGACCTCGATCCCTTGT
GCAGGATCAAGATGGCTTCCTGTGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCATATGGCAAAAGGAAGTTATGGCCTAGAACGCCTGAGTATCGAGGAAGGAGTA
CCCAGGGCTGGCTTTGTGCACCAAGGTTCTGTAGAGACCCTGATACATCATTCTGTTCAAGAGT
ATTTATGGGGCCTCTTGGGCATCAGGCTCAGTGGGGACTGGGAGATGGATAAGAGCCAGCAGTC
ACTCCAGGCAGACAGAGTCACACAGGGAATTTCTATATGACGTGACAGATGGCTGGATAGGGTG
CCATGGATGATCAGGGCCAGAGTGACAAGCTCTGCCGTTCTTTTGTTCTTGAGATTTTAAACTC
CCTTCCCCCATTCCTGCTTATTAAGGGAGGCTAGGCTACTCTTCCCTTCTTGGCCAGTAGTAGG
TAGCTTTCAACTGTTTGGGTTTTACACACCAGGCGGGACAGCTTCCTCTGTCCTGGTGTGAGAC
CCAACGCTACAGATTTCTGAAACACCCTTTGACAAAGTAATTCTAAAGCAGAACCTAAAGGAAT
TTAAGTTGAGTATTCTTGTCTTGGCAATTGTAACTTCTCATCTAGTTAACTCCTGTGTCTGAGC
ACTTATCCATGTGTCAGGTGAGGGTCCAGCTTGATGACCATGGCTCTCCACTTCATAGTGTGTG
ATCTAGAAGGACCTTCTTAAGGACCTGAGAGTGCTGATTGTCCTTGGTGTTTGTGCTTCACAGA
AGGCCCTCAAAGCGTTTCATTTTACTCTCCCTCCTACTCCTGCCAAGTAATTCTCTGCCTGGAG
ACTAGGCCTAGGTCAGGAGCTGGCAAGGAGGAGTCCTGGACTCAAAAGAGAGACCTGGCTCCTG
GCTCCAACTCACTTCCTTGTTGCCTATGTGACTTGGCTCCCTCTGTCCCATCTGAGCCACTTGG
TTGCCTCCTAGGTCTAAAGTAAAGGCCCTCCCACTCCCTGCTTCAGAAAGCTTAGCTCTCTGAA
CCTACACTCCAGGCACAGGGCAGAGGTGACACTTGTAGAGGGAGGGATGCCTAAGACCTCACAC
TTTATACTTTCCATTCAAGGTCTTGGACATTGACTCCAGGGCACCGGCATAATACAGTGGACTG
CTGTGTATCCCTTGCCCACAGGTAATAGCTGAGGAAGAGGCAGGCCAGAGGCAGAAGAGCAGGC
CTCAGACTTTTAGAGGAAGATCCTAGGGCTGTGCTCCCAGTCTGCCTTCCATTGTCCTGGAGCC
ATAAGCTACTAGCCCCCTCCCCCAGATCTTCCTCTGGAGAATAAACTATCAGCAGGATTGATTA
CCCTGCAGGTCCCTAGGCAGCTGTCTCTGGCCTGCATCTGGAGCTGATTTCTGTGCCTTGTTAG
ACCCATTGTCTTGGATGGCTCGTTTCCACAAATCAAAGTTGGCTTCACTGCCCTAACCCTAGTG
TGACCCCAGATGCATGTTTGTTCGTCCCATGAACACTTCCTGCTTAGAGGGGAGAAAAGCTAAA
GTGCACATGAGTTAGCGTAAGAGCCACCTCCCTGCTCTGATGCAGACAGGATGTTCCTTCCCAT
CCCAGCCCCTCCCTGGCCTCCCACCTAGGCCTGCCCTTCTGAAGTAGATTCAGAGAGGACGGAT
ATGTTCGGGAAGTTGGAGCCATCACCTGGCACCAGAGGGGAGACTCATAGCCTAGTGGCTCCTA
TAAGGCTCTGTGCCACCCACATCAAGAGTGCAGCAGCTGCCCCAAGTCCTGTGCTTGGCAACAT
TCCCCCCAATGATGGGATGCCTGGAGGCCCCATCCCACCAGGTTTCTTTCAGGGTCCTCCGGGG
TCACAGCCCTCGCCGCACGCACAGCCTCCACCTCACAATCCCAGCAGCATGATGGGACCCCACA
GTCAGCCTTTTATGTCACCGAGATATGCAGGCGGCCCCAGGCCCCCGATCAGAATGGGAAACCA
GCCTCCAGGAGGAGTTCCTGGGACACAGCCATTGCTGCCCAATTCCATGGATCCCACACGACAA
CAAGGTCACCCCAACATGGGAGGGTCAATGCAGAGAATGAACCCTCCCCGAGGCATGGGGCCCA
TGGGGCCTGGCCCACAGACTGACCCTTGGTTATCGTTGCAGAATTACGGCAGCGGCATGAGACC
ACCACCCAACTCCCTCGGCCCCGCCATGCCTGGGATTAACATGGGCCCAGGAGCTGGCAGACCC
TGGCCCAATCCCAACAGTGCTAACTCAGGAAGGCAGCTCCAATCCATGGCTCCTGAATCTTCTT
TCCAGATCCCGTACTCCTCCTCATCACCCGGAACCTATGTGGGACCCCCTGGTGGTGGCGGCCC
TCCTGGAACCCCCATCATGCCTAGTCCTGCGGATTCAACAAATTCCAGTGACAACATCTACACA
ATGATTAATCCTGTGCCGCCTGGAGGCAGCCGGTCTAACTTTCCAATGGGTCCTGGCTCAGATG
GCCCAATGGGCGGCATGGGAGGCATGGAGCCACACCACATGAATGGATCCTTAGGATCAGGCGA
CATAGATGGACTTCCAAAAAATTCTCCTAACAACATAAGTGGCATTAGCAACCCTCCAGGCACC
CCTCGGGATGACGGCGAGCTGGGGGGGAACTTCCTCCACTCCTTCCAGAACGACAATTATTCTC
CAAGCATGACGATGAGTGTGTGATCCCTTCTCCACAACGCTGAGAGCCGGCATTGCAGGCAGAA
GATGCCAGAAATTATGCAAGAAGAAGTGAGGTGTCGATACCAGGAGCTGGGGGAGGGCGTCTCC
TGCTCCCCTCCATCCCTCCCATTCTCTCCCCCACCTTTCCCAATTTTAGTTTCATGCAATAAAA
AGGCCAAACTTTTTATTCCGTCAAACATGAAGGACAAAACTCAGAAATATATTTCAAGTCAACG
ACCAGAAAAATCTCACCTTCTCCCTGCCCAAAAGGACCTTTCTGTACATGACACTTTTTGTTGG
GTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGGGATTTTACTGTTGCTGGGATTTTAAATTTG
TTTTTTTGGGGGGATTCTTTGGGGGAATTTTTTTAATGGAAGCTTCTAGCAAGCCCTATGCCCA
CCCAATCAACCTCATTGCTTTCTTCTTTAATAAAAGGAAAAAAGGAAAAAGAAAAAAAAGGCCA
AAAAAAAAAAAAAAGGAAGAAAAACCCACAAGCCCTGCTGTCTATCCCCAAGTCCTACCACCAG
AAAAGCTAGTCTAGGTGTGCAATATCACACTGATGTTGTAGCCATCTAAAAATAATAATAATAA
ACTGGACAGTTTACAATTGGTGGTTTCTTTCAAAAGCTGTTTGGGGAGAAGGAACTGAAGTCAA
CGGTTTCCACGTGGGCCTTTGGGGTTTGTGCTGGGCAAGGAGATGCAGGTGTCCACTTTGCTCT
GGCTGGGCTGGCCATCACAACACACTGGGCCAGAGGACCCAGAGCCCCCAACTTGCCGTCACCC
AACAGAGACCATCGCTGTGACCCAGCGTACACACTGTTCCAGGATGGCTGCCTCTTCTCCAAAC
CTCTCATGCCCAGCCACAGGGGCCTCCAGTCCCTCGGTCCCCACCGTTTCCTGGCAAGAATCCT
GCTGGCTGGGTAGTGGCCCAGGCTGTGTAGGAGAGGCCCCACCAACAGGATGACTACAATCTGG
GCCATAGAACTGACCTCCATGTTCTGGTCCCGAGCTCCTCACATAGTGCGCACTGGCAGGGCGG
GCTGAAGTTGTGTTTTTCTTTTTTTCTCCTGTTTGTCCTTTTTCAAAGATGGGTGTTGGTTGGA
ATTGCTCTGTATTTGCTTGGAACTGGATGGACAGACTTCAGCATTGCTGTGGGGTGGGGGGAGC
ACCAGCAACCAAACAGACACTGTTTCTGGTCCTGTTTTTATTTTCAAAAACTGATGAACCTGAT
GGTGGAGCCTGTCCCCTCTGAGGAGGGGTGACTTGGCTGCCCTGGCCTCTCCCCGTGGCAACCA
TTGTGTCTTGCTCCGGAAGACACTGAGTTCTTTGTACATTTACCCCCTCTGTGCCCCGCCCATC
CTCGTAGCTGGTCTTTGTTTTCTTACCTCCCCTTTCTGACCCATGTATATCATATTATGTGAGA
TACCATCTGCCTGACAAAAGACTTGTGCGGATCCTTGGGAACATTGTAGCTGTTTCTGTGTTTT
TTCTTACCTTGTAGTCTGGTTCTGAATTATGAGAGGAAAAAAAGTAATTATGATACATTGTAGT
TTGTGTACGATATATGTTGATAACGTTTTATTAAAGGGACATCTTTTTTCCGCA

hide sequence

RefSeq Acc Id:

XM_039110867 ⟹ XP_038966795

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,995,796 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,766,998 - 121,828,035 (+)	NCBI

RefSeq Acc Id:

XM_039110869 ⟹ XP_038966797

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,962,355 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,728,992 - 121,828,035 (+)	NCBI

RefSeq Acc Id:

XM_039110871 ⟹ XP_038966799

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,962,484 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,733,593 - 121,828,035 (+)	NCBI

RefSeq Acc Id:

XM_039110872 ⟹ XP_038966800

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,963,952 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,735,417 - 121,828,031 (+)	NCBI

RefSeq Acc Id:

XM_039110873 ⟹ XP_038966801

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	127,039,455 - 127,057,968 (+)	NCBI
mRatBN7.2	5	121,810,255 - 121,828,035 (+)	NCBI

RefSeq Acc Id:

XM_063288492 ⟹ XP_063144562

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,920,145 - 127,057,968 (+)	NCBI

RefSeq Acc Id:

XM_063288493 ⟹ XP_063144563

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,920,150 - 127,057,968 (+)	NCBI

RefSeq Acc Id:

XM_063288494 ⟹ XP_063144564

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,920,150 - 127,057,968 (+)	NCBI

RefSeq Acc Id:

XM_063288495 ⟹ XP_063144565

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,920,154 - 127,057,968 (+)	NCBI

RefSeq Acc Id:

XM_063288496 ⟹ XP_063144566

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	126,995,808 - 127,057,968 (+)	NCBI

RefSeq Acc Id:

XM_063288497 ⟹ XP_063144567

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	127,039,455 - 127,057,968 (+)	NCBI

RefSeq Acc Id:

XM_063288498 ⟹ XP_063144568

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	127,039,455 - 127,057,968 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_445810	(Get FASTA)	NCBI Sequence Viewer
	XP_006238594	(Get FASTA)	NCBI Sequence Viewer
	XP_006238595	(Get FASTA)	NCBI Sequence Viewer
	XP_006238596	(Get FASTA)	NCBI Sequence Viewer
	XP_006238597	(Get FASTA)	NCBI Sequence Viewer
	XP_006238598	(Get FASTA)	NCBI Sequence Viewer
	XP_006238599	(Get FASTA)	NCBI Sequence Viewer
	XP_006238600	(Get FASTA)	NCBI Sequence Viewer
	XP_017449152	(Get FASTA)	NCBI Sequence Viewer
	XP_038966795	(Get FASTA)	NCBI Sequence Viewer
	XP_038966797	(Get FASTA)	NCBI Sequence Viewer
	XP_038966799	(Get FASTA)	NCBI Sequence Viewer
	XP_038966800	(Get FASTA)	NCBI Sequence Viewer
	XP_038966801	(Get FASTA)	NCBI Sequence Viewer
	XP_063144562	(Get FASTA)	NCBI Sequence Viewer
	XP_063144563	(Get FASTA)	NCBI Sequence Viewer
	XP_063144564	(Get FASTA)	NCBI Sequence Viewer
	XP_063144565	(Get FASTA)	NCBI Sequence Viewer
	XP_063144566	(Get FASTA)	NCBI Sequence Viewer
	XP_063144567	(Get FASTA)	NCBI Sequence Viewer
	XP_063144568	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD52710	(Get FASTA)	NCBI Sequence Viewer
	AAI07667	(Get FASTA)	NCBI Sequence Viewer
	EDL90453	(Get FASTA)	NCBI Sequence Viewer
	EDL90454	(Get FASTA)	NCBI Sequence Viewer
	EDL90455	(Get FASTA)	NCBI Sequence Viewer
	EDL90456	(Get FASTA)	NCBI Sequence Viewer
	EDL90457	(Get FASTA)	NCBI Sequence Viewer
	EDL90458	(Get FASTA)	NCBI Sequence Viewer
	EDL90459	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000011408
	ENSRNOP00000011408.6
	ENSRNOP00000080007.1
	ENSRNOP00000082297
	ENSRNOP00000082297.1
	ENSRNOP00000089190
	ENSRNOP00000089190.1
	ENSRNOP00000095848
	ENSRNOP00000095848.1
GenBank Protein	Q9R050	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_445810 ⟸ NM_053358

- UniProtKB:

Q9R050 (UniProtKB/Swiss-Prot), Q3B7C9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWC
VFWDLYCAAPERRDTCEHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQPFMSPR
YAGGPRPPIRMGNQPPGGVPGTQPLMPNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNY
GSGMRPPPNSLGPAMPGINMGPGAGRPWPNPNSANSIPYSSSSPGTYVGPPGGGGPPGTPIMPS
PADSTNSSDNIYTMINPVPPGGSRSNFPMGPGSDGPMGGMGGMEPHHMNGSLGSGDINGLPKNS
PNNISGISNPPGTPRDDGELGGNFLHSFQNDNYSPSMTMSV

hide sequence

RefSeq Acc Id:	XP_006238594 ⟸ XM_006238532
- Peptide Label:	isoform X1
- UniProtKB:	Q9R050 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWC VFWDLYCAAPERRDTCEHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQGPPGSQ PSPHAQPPPHNPSSMMGPHSQPFMSPRYAGGPRPPIRMGNQPPGGVPGTQPLLPNSMDPTRQQG HPNMGGSMQRMNPPRGMGPMGPGPQTDPWLSLQNYGSGMRPPPNSLGPAMPGINMGPGAGRPWP NPNSANSGRQLQSMAPESSFQIPYSSSSPGTYVGPPGGGGPPGTPIMPSPADSTNSSDNIYTMI NPVPPGGSRSNFPMGPGSDGPMGGMGGMEPHHMNGSLGSGDIDGLPKNSPNNISGISNPPGTPR DDGELGGNFLHSFQNDNYSPSMTMSV hide sequence

RefSeq Acc Id:	XP_006238596 ⟸ XM_006238534
- Peptide Label:	isoform X3
- UniProtKB:	Q9R050 (UniProtKB/Swiss-Prot), A0A8I5ZWL0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWC VFWDLYCAAPERRDTCEHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQGPPGSQ PSPHAQPPPHNPSSMMGPHSQPFMSPRYAGGPRPPIRMGNQPPGGVPGTQPLLPNSMDPTRQQG HPNMGGSMQRMNPPRGMGPMGPGPQTDPWLSLQNYGSGMRPPPNSLGPAMPGINMGPGAGRPWP NPNSANSIPYSSSSPGTYVGPPGGGGPPGTPIMPSPADSTNSSDNIYTMINPVPPGGSRSNFPM GPGSDGPMGGMGGMEPHHMNGSLGSGDIDGLPKNSPNNISGISNPPGTPRDDGELGGNFLHSFQ NDNYSPSMTMSV hide sequence

RefSeq Acc Id:	XP_006238595 ⟸ XM_006238533
- Peptide Label:	isoform X2
- UniProtKB:	Q9R050 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWC VFWDLYCAAPERRDTCEHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQGPPGSQ PSPHAQPPPHNPSSMMGPHSQPFMSPRYAGGPRPPIRMGNQPPGGVPGTQPLLPNSMDPTRQQG HPNMGGSMQRMNPPRGMGPMGPGPQNYGSGMRPPPNSLGPAMPGINMGPGAGRPWPNPNSANSG RQLQSMAPESSFQIPYSSSSPGTYVGPPGGGGPPGTPIMPSPADSTNSSDNIYTMINPVPPGGS RSNFPMGPGSDGPMGGMGGMEPHHMNGSLGSGDIDGLPKNSPNNISGISNPPGTPRDDGELGGN FLHSFQNDNYSPSMTMSV hide sequence

RefSeq Acc Id:	XP_006238598 ⟸ XM_006238536
- Peptide Label:	isoform X5
- UniProtKB:	Q9R050 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWC VFWDLYCAAPERRDTCEHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQPFMSPR YAGGPRPPIRMGNQPPGGVPGTQPLLPNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQTD PWLSLQNYGSGMRPPPNSLGPAMPGINMGPGAGRPWPNPNSANSGRQLQSMAPESSFQIPYSSS SPGTYVGPPGGGGPPGTPIMPSPADSTNSSDNIYTMINPVPPGGSRSNFPMGPGSDGPMGGMGG MEPHHMNGSLGSGDIDGLPKNSPNNISGISNPPGTPRDDGELGGNFLHSFQNDNYSPSMTMSV hide sequence

RefSeq Acc Id:	XP_006238597 ⟸ XM_006238535
- Peptide Label:	isoform X4
- UniProtKB:	Q9R050 (UniProtKB/Swiss-Prot), A6JYP3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWC VFWDLYCAAPERRDTCEHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQGPPGSQ PSPHAQPPPHNPSSMMGPHSQPFMSPRYAGGPRPPIRMGNQPPGGVPGTQPLLPNSMDPTRQQG HPNMGGSMQRMNPPRGMGPMGPGPQNYGSGMRPPPNSLGPAMPGINMGPGAGRPWPNPNSANSI PYSSSSPGTYVGPPGGGGPPGTPIMPSPADSTNSSDNIYTMINPVPPGGSRSNFPMGPGSDGPM GGMGGMEPHHMNGSLGSGDIDGLPKNSPNNISGISNPPGTPRDDGELGGNFLHSFQNDNYSPSM TMSV hide sequence

RefSeq Acc Id:	XP_006238600 ⟸ XM_006238538
- Peptide Label:	isoform X7
- UniProtKB:	Q9R050 (UniProtKB/Swiss-Prot), F7FHV2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWC VFWDLYCAAPERRDTCEHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQPFMSPR YAGGPRPPIRMGNQPPGGVPGTQPLLPNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQTD PWLSLQNYGSGMRPPPNSLGPAMPGINMGPGAGRPWPNPNSANSIPYSSSSPGTYVGPPGGGGP PGTPIMPSPADSTNSSDNIYTMINPVPPGGSRSNFPMGPGSDGPMGGMGGMEPHHMNGSLGSGD IDGLPKNSPNNISGISNPPGTPRDDGELGGNFLHSFQNDNYSPSMTMSV hide sequence

RefSeq Acc Id:	XP_006238599 ⟸ XM_006238537
- Peptide Label:	isoform X6
- UniProtKB:	Q9R050 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MFAKGKGSAVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWC VFWDLYCAAPERRDTCEHSSEAKAFHDYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQPFMSPR YAGGPRPPIRMGNQPPGGVPGTQPLLPNSMDPTRQQGHPNMGGSMQRMNPPRGMGPMGPGPQNY GSGMRPPPNSLGPAMPGINMGPGAGRPWPNPNSANSGRQLQSMAPESSFQIPYSSSSPGTYVGP PGGGGPPGTPIMPSPADSTNSSDNIYTMINPVPPGGSRSNFPMGPGSDGPMGGMGGMEPHHMNG SLGSGDIDGLPKNSPNNISGISNPPGTPRDDGELGGNFLHSFQNDNYSPSMTMSV hide sequence

RefSeq Acc Id:

XP_017449152 ⟸ XM_017593663

- Peptide Label:

isoform X9

- Sequence:

show sequence

MFGKLEPSPGTRGETHSLVAPIRLCATHIKSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQGPPG
SQPSPHAQPPPHNPSSMMGPHSQPFMSPRYAGGPRPPIRMGNQPPGGVPGTQPLLPNSMDPTRQ
QGHPNMGGSMQRMNPPRGMGPMGPGPQTDPWLSLQNYGSGMRPPPNSLGPAMPGINMGPGAGRP
WPNPNSANSGRQLQSMAPESSFQIPYSSSSPGTYVGPPGGGGPPGTPIMPSPADSTNSSDNIYT
MINPVPPGGSRSNFPMGPGSDGPMGGMGGMEPHHMNGSLGSGDIDGLPKNSPNNISGISNPPGT
PRDDGELGGNFLHSFQNDNYSPSMTMSV

hide sequence

RefSeq Acc Id:

ENSRNOP00000011408 ⟸ ENSRNOT00000011408

RefSeq Acc Id:	XP_038966797 ⟸ XM_039110869
- Peptide Label:	isoform X14
- UniProtKB:	A6JYP5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966799 ⟸ XM_039110871
- Peptide Label:	isoform X16
- UniProtKB:	A6JYP5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966800 ⟸ XM_039110872
- Peptide Label:	isoform X17
- UniProtKB:	A6JYP9 (UniProtKB/TrEMBL), A6JYP5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966795 ⟸ XM_039110867
- Peptide Label:	isoform X13
- UniProtKB:	A6JYP5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038966801 ⟸ XM_039110873
- Peptide Label:	isoform X18

RefSeq Acc Id:

ENSRNOP00000080007 ⟸ ENSRNOT00000104386

RefSeq Acc Id:

ENSRNOP00000089190 ⟸ ENSRNOT00000101748

RefSeq Acc Id:

ENSRNOP00000082297 ⟸ ENSRNOT00000096305

RefSeq Acc Id:

ENSRNOP00000095848 ⟸ ENSRNOT00000112504

RefSeq Acc Id:	XP_063144562 ⟸ XM_063288492
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063144564 ⟸ XM_063288494
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063144563 ⟸ XM_063288493
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_063144565 ⟸ XM_063288495
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_063144566 ⟸ XM_063288496
- Peptide Label:	isoform X15

RefSeq Acc Id:	XP_063144567 ⟸ XM_063288497
- Peptide Label:	isoform X19

RefSeq Acc Id:	XP_063144568 ⟸ XM_063288498
- Peptide Label:	isoform X20

Protein Domains

LisH

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9R050-F1-model_v2	AlphaFold	Q9R050	1-361	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13693886

Promoter ID:

EPDNEW_R4411

Type:

multiple initiation site

Name:

Ssbp3_1

Description:

single stranded DNA binding protein 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	5	126,511,336 - 126,511,396	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:621502	AgrOrtholog
BioCyc Gene	G2FUF-40433	BioCyc
Ensembl Genes	ENSRNOG00000007920	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000011408.8	UniProtKB/TrEMBL
	ENSRNOT00000096305.1	UniProtKB/TrEMBL
	ENSRNOT00000101748	ENTREZGENE
	ENSRNOT00000101748.1	UniProtKB/TrEMBL
	ENSRNOT00000104386.1	UniProtKB/TrEMBL
	ENSRNOT00000112504.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7936459	IMAGE-MGC_LOAD
InterPro	LisH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SSDP_DNA-bd	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:84354	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:124589	IMAGE-MGC_LOAD
NCBI Gene	84354	ENTREZGENE
PANTHER	SINGLE STRANDED DNA BINDING PROTEIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SINGLE-STRANDED DNA-BINDING PROTEIN 3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	SSDP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Ssbp3	PhenoGen
PRINTS	SSDNABINDING	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	LISH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000007920	RatGTEx
SMART	LisH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A8I5ZWL0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AB86_RAT	UniProtKB/TrEMBL
	A0A8I6AME9_RAT	UniProtKB/TrEMBL
	A0A8I6G610_RAT	UniProtKB/TrEMBL
	A6JYP3	ENTREZGENE, UniProtKB/TrEMBL
	A6JYP5	ENTREZGENE, UniProtKB/TrEMBL
	A6JYP6_RAT	UniProtKB/TrEMBL
	A6JYP9	ENTREZGENE, UniProtKB/TrEMBL
	F7FHV2	ENTREZGENE, UniProtKB/TrEMBL
	Q3B7C9	ENTREZGENE, UniProtKB/TrEMBL
	Q9R050	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-07-29	Ssbp3	single stranded DNA binding protein 3	LOC102549605	uncharacterized LOC102549605	Data merged from RGD:7526971	737654	PROVISIONAL
2013-12-17	LOC102549605	uncharacterized LOC102549605			Symbol and Name status set to provisional	70820	PROVISIONAL
2005-11-17	Ssbp3	single stranded DNA binding protein 3	Ssdp3		Symbol updated	1299863	APPROVED
2004-04-22	Ssdp3	single stranded DNA binding protein 3	Ssdp	sequence-specific single-stranded-DNA-binding protein	Symbol and Name updated to reflect Human and Mouse nomenclature	625702	APPROVED
2002-08-07	Ssdp	sequence-specific single-stranded-DNA-binding protein			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_homology	80% homologous to the chicken gene	634142
gene_protein	361 amino acid protein with a mass of 37.7 kDa	634142

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar