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ONTOLOGY REPORT - ANNOTATIONS


Term:liver development
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Accession:GO:0001889 term browser browse the term
Definition:The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes.



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liver development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AACS acetoacetyl-CoA synthetase ISO RGD PMID:10513626 RGD:2301023 NCBI chr12:125,065,435...125,143,316
Ensembl chr12:125,065,434...125,143,333
JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16121256) Ensembl
MGI
PMID:16121256 GO_REF:0000107 NCBI chr 1:75,724,709...75,763,679
Ensembl chr 1:75,724,431...75,787,575
JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:5166591 GO_REF:0000107 RGD:2326169 NCBI chr11:108,116,705...108,147,603
Ensembl chr11:108,116,695...108,148,957
JBrowse link
G ACAT2 acetyl-CoA acetyltransferase 2 ISO RGD PMID:5166591 RGD:2326169 NCBI chr 6:159,762,045...159,779,112
Ensembl chr 6:159,762,045...159,779,112
JBrowse link
G ACO1 aconitase 1 ISO RGD PMID:755797 RGD:11552585 NCBI chr 9:32,384,643...32,454,769
Ensembl chr 9:32,384,603...32,454,769
JBrowse link
G ACO2 aconitase 2 involved_in ISO
IEA
RGD
Ensembl
PMID:755797 GO_REF:0000107 RGD:11552585 NCBI chr22:41,469,117...41,528,974
Ensembl chr22:41,447,830...41,529,273
JBrowse link
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7670465)
(PMID:7731963)
Ensembl
MGI
PMID:7670465 PMID:7731963 GO_REF:0000107 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,584,896...44,652,252
JBrowse link
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:8408243 RGD:8548535 NCBI chr 5:148,826,611...148,828,623
Ensembl chr 5:148,826,611...148,828,623
JBrowse link
G AFP alpha fetoprotein ISO RGD PMID:16822301 RGD:2292045 NCBI chr 4:73,436,221...73,456,174
Ensembl chr 4:73,431,138...73,456,174
JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (PMID:10973493), (PMID:7732381), (PMID:8692887) DFLAT PMID:7732381 PMID:8692887 PMID:10973493 NCBI chr 7:17,298,652...17,346,147
Ensembl chr 7:16,916,359...17,346,152
JBrowse link
G AK2 adenylate kinase 2 ISO RGD PMID:5123889 RGD:5490208 NCBI chr 1:33,007,940...33,036,883
Ensembl chr 1:33,007,986...33,080,996
JBrowse link
G AK3 adenylate kinase 3 ISO RGD PMID:5123889 RGD:5490208 NCBI chr 9:4,709,556...4,742,043
Ensembl chr 9:4,709,556...4,742,043
JBrowse link
G AK4 adenylate kinase 4 ISO RGD PMID:9813319 RGD:632174 NCBI chr 1:65,147,552...65,232,145
Ensembl chr 1:65,147,549...65,232,145
JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:14729401 RGD:1643117 NCBI chr 9:72,900,671...72,953,053
Ensembl chr 9:72,900,671...73,080,442
JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in ISO
IEA
RGD
Ensembl
PMID:14729401 GO_REF:0000107 RGD:1643117 NCBI chr15:57,953,429...58,065,711
Ensembl chr15:57,953,424...58,497,866
JBrowse link
G ALDH2 aldehyde dehydrogenase 2 family member ISO RGD PMID:16291827 RGD:2300311 NCBI chr12:111,766,933...111,817,532
Ensembl chr12:111,766,887...111,817,532
JBrowse link
G ALDH9A1 aldehyde dehydrogenase 9 family member A1 ISO RGD PMID:19150623 RGD:2313411 NCBI chr 1:165,662,216...165,698,562
Ensembl chr 1:165,662,216...165,698,562
JBrowse link
G ALDOB aldolase, fructose-bisphosphate B ISO RGD PMID:8641049 RGD:2313428 NCBI chr 9:101,420,560...101,435,774
Ensembl chr 9:101,420,560...101,449,664
JBrowse link
G ANG angiogenin ISO RGD PMID:2440105 RGD:2325721 NCBI chr14:20,684,177...20,694,186
Ensembl chr14:20,684,177...20,698,971
JBrowse link
G ARF6 ARF GTPase 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16880525) Ensembl
MGI
PMID:16880525 GO_REF:0000107 NCBI chr14:49,893,082...49,897,054
Ensembl chr14:49,893,079...49,897,054
JBrowse link
G ARG1 arginase 1 ISO RGD PMID:8690412 RGD:4144072 NCBI chr 6:131,573,226...131,584,329
Ensembl chr 6:131,470,832...131,584,332
JBrowse link
G ARID5B AT-rich interaction domain 5B involved_in TAS (PMID:21532585) UniProt PMID:21532585 NCBI chr10:61,901,699...62,096,944
Ensembl chr10:61,901,684...62,096,944
JBrowse link
G ASL argininosuccinate lyase ISO DNA:increased methylation:5' utr RGD PMID:9535537 PMID:10473900 RGD:1599266 RGD:1599268 NCBI chr 7:66,075,819...66,093,576
Ensembl chr 7:66,075,800...66,094,697
JBrowse link
G ASNS asparagine synthetase (glutamine-hydrolyzing) ISO RGD PMID:237754 RGD:2316008 NCBI chr 7:97,851,677...97,928,441
Ensembl chr 7:97,851,677...97,872,542
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:9395312 PMID:10473900 GO_REF:0000107 RGD:1599266 RGD:4139912 NCBI chr 9:130,444,707...130,501,274
Ensembl chr 9:130,444,961...130,501,274
JBrowse link
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:175,072,259...175,168,203
Ensembl chr 2:175,072,250...175,168,382
JBrowse link
G ATF7 activating transcription factor 7 involved_in ISO (PMID:17699753) MGI PMID:17699753 NCBI chr12:53,507,856...53,626,382
Ensembl chr12:53,507,856...53,626,410
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:15866887) MGI PMID:15866887 NCBI chr 3:11,272,397...11,576,353
Ensembl chr 3:11,272,309...11,557,665
JBrowse link
G ATP5F1B ATP synthase F1 subunit beta ISO RGD PMID:8420961 RGD:13792579 NCBI chr12:56,638,175...56,645,984
Ensembl chr12:56,638,175...56,645,984
JBrowse link
G ATP7A ATPase copper transporting alpha involved_in ISO
IEA
RGD
Ensembl
PMID:25349135 GO_REF:0000107 RGD:11341669 NCBI chr  X:77,910,693...78,050,395
Ensembl chr  X:77,910,690...78,050,395
JBrowse link
G BAAT bile acid-CoA:amino acid N-acyltransferase involved_in ISO
IEA
RGD
Ensembl
PMID:7575455 GO_REF:0000107 RGD:69770 NCBI chr 9:101,360,417...101,385,006
Ensembl chr 9:101,354,182...101,385,400
JBrowse link
G BDH1 3-hydroxybutyrate dehydrogenase 1 ISO RGD PMID:2806552 RGD:4105456 NCBI chr 3:197,509,783...197,573,343
Ensembl chr 3:197,509,783...197,573,323
JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO
IEA
RGD
Ensembl
PMID:14160653 GO_REF:0000107 RGD:2303538 NCBI chr 2:27,217,369...27,243,943
Ensembl chr 2:27,217,369...27,243,943
JBrowse link
G CADM1 cell adhesion molecule 1 involved_in ISO
IEA
RGD
Ensembl
PMID:17326163 GO_REF:0000107 RGD:2289097 NCBI chr11:115,169,236...115,504,415
Ensembl chr11:115,169,218...115,504,957
JBrowse link
G CAST calpastatin ISO RGD PMID:16871587 RGD:5683869 NCBI chr 5:95,961,429...96,774,683
Ensembl chr 5:96,247,756...96,779,595
Ensembl chr 5:96,247,756...96,779,595
JBrowse link
G CCND1 cyclin D1 ISO RGD PMID:15809057 RGD:1582338 NCBI chr11:69,641,156...69,654,474
Ensembl chr11:69,641,156...69,654,474
JBrowse link
G CCND2 cyclin D2 ISO RGD PMID:15809057 RGD:1582338 NCBI chr12:4,273,762...4,305,353
Ensembl chr12:4,269,771...4,305,353
JBrowse link
G CCNE1 cyclin E1 ISO RGD PMID:15809057 RGD:1582338 NCBI chr19:29,811,991...29,824,312
Ensembl chr19:29,811,991...29,824,312
JBrowse link
G CD2AP CD2 associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29729186) Ensembl
MGI
PMID:29729186 GO_REF:0000107 NCBI chr 6:47,477,789...47,627,263
Ensembl chr 6:47,477,789...47,627,263
JBrowse link
G CDK5RAP3 CDK5 regulatory subunit associated protein 3 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:47,967,904...47,981,781
Ensembl chr17:47,967,810...47,981,781
JBrowse link
G CDKN2B cyclin dependent kinase inhibitor 2B involved_in ISO
IEA
RGD
Ensembl
PMID:11042273 GO_REF:0000107 RGD:7248763 NCBI chr 9:22,002,903...22,009,313
Ensembl chr 9:22,002,903...22,009,305
JBrowse link
G CEBPA CCAAT enhancer binding protein alpha acts_upstream_of_or_within
involved_in
ISO
ISS
IEA
(PMID:17021047) RGD
MGI
UniProt
Ensembl
PMID:16172914 PMID:17021047 GO_REF:0000024 GO_REF:0000107 RGD:1625368 NCBI chr19:33,299,934...33,302,534
Ensembl chr19:33,299,934...33,302,534
JBrowse link
G CEBPB CCAAT enhancer binding protein beta ISO RGD PMID:1377818 RGD:69946 NCBI chr20:50,190,583...50,192,690
Ensembl chr20:50,190,734...50,192,690
JBrowse link
G CEBPG CCAAT enhancer binding protein gamma involved_in ISS UniProt GO_REF:0000024 NCBI chr19:33,373,709...33,382,686
Ensembl chr19:33,373,685...33,382,686
JBrowse link
G CFC1B cryptic, EGF-CFC family member 1B acts_upstream_of_or_within ISO (PMID:10521397) MGI PMID:10521397 NCBI chr 2:130,521,222...130,528,603
Ensembl chr 2:130,521,197...130,528,604
JBrowse link
G CIT citron rho-interacting serine/threonine kinase ISO RGD PMID:12411428 RGD:628497 NCBI chr12:119,685,791...119,877,320
Ensembl chr12:119,685,791...119,877,320
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(PMID:17644732) BHF-UCL
MGI
Ensembl
PMID:17644732 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648
JBrowse link
G COBL cordon-bleu WH2 repeat protein involved_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:51,016,212...51,316,809
Ensembl chr 7:51,016,212...51,316,818
JBrowse link
G CP ceruloplasmin ISO RGD PMID:2332446 RGD:728241 NCBI chr 3:149,162,414...149,221,829
Ensembl chr 3:149,162,410...149,221,829
JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:8690412 GO_REF:0000107 RGD:4144072 NCBI chr 2:210,477,685...210,679,107
Ensembl chr 2:210,477,682...210,679,107
JBrowse link
G CTNNB1 catenin beta 1 ISO RGD PMID:17236583 RGD:1599633 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 involved_in ISO
IEA
RGD
Ensembl
PMID:12162855 GO_REF:0000107 RGD:727721 NCBI chr15:74,719,542...74,725,528
Ensembl chr15:74,719,542...74,725,536
JBrowse link
G DBP D-box binding PAR bZIP transcription factor ISO RGD PMID:2331750 RGD:727680 NCBI chr19:48,630,030...48,637,379
Ensembl chr19:48,630,030...48,637,379
JBrowse link
G DDX39B DExD-box helicase 39B ISO RGD PMID:1618789 RGD:632224 NCBI chr 6:31,530,226...31,542,003
Ensembl chr 6:31,530,219...31,542,448
JBrowse link
G DUT deoxyuridine triphosphatase ISO RGD PMID:11121581 RGD:5133681 NCBI chr15:48,331,095...48,343,373
Ensembl chr15:48,331,011...48,343,373
JBrowse link
G EGFR epidermal growth factor receptor involved_in ISO
IEA
RGD
Ensembl
PMID:12454858 GO_REF:0000107 RGD:2289959 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G ELK1 ETS transcription factor ELK1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:31877385) Ensembl
MGI
PMID:31877385 GO_REF:0000107 NCBI chr  X:47,635,520...47,650,604
Ensembl chr  X:47,635,520...47,650,604
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:10231554 RGD:13204733 NCBI chr 6:131,808,020...131,895,155
Ensembl chr 6:131,808,016...131,895,155
JBrowse link
G EPHX1 epoxide hydrolase 1 ISO RGD PMID:2469391 RGD:4889418 NCBI chr 1:225,810,124...225,845,563
Ensembl chr 1:225,810,124...225,845,563
JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:12454858 RGD:2289959 NCBI chr17:39,688,094...39,728,658
Ensembl chr17:39,687,914...39,730,426
JBrowse link
G ERRFI1 ERBB receptor feedback inhibitor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22912762)
(PMID:28053990)
Ensembl
MGI
PMID:22912762 PMID:28053990 GO_REF:0000107 NCBI chr 1:8,011,727...8,026,309
Ensembl chr 1:8,004,404...8,026,309
JBrowse link
G FOXM1 forkhead box M1 acts_upstream_of_or_within ISO (PMID:15531365) MGI PMID:15531365 NCBI chr12:2,857,680...2,877,174
Ensembl chr12:2,857,680...2,877,174
JBrowse link
G FPGS folylpolyglutamate synthase involved_in ISO
IEA
RGD
Ensembl
PMID:1435744 GO_REF:0000107 RGD:2315102 NCBI chr 9:127,802,858...127,814,506
Ensembl chr 9:127,794,597...127,814,494
JBrowse link
G FSCN1 fascin actin-bundling protein 1 ISO RGD PMID:18855019 RGD:2317768 NCBI chr 7:5,592,816...5,606,655
Ensembl chr 7:5,592,816...5,606,655
JBrowse link
G GATA6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15767668) Ensembl
MGI
PMID:15767668 GO_REF:0000107 NCBI chr18:22,169,589...22,202,528
Ensembl chr18:22,169,589...22,202,528
JBrowse link
G GFER growth factor, augmenter of liver regeneration involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:1,984,193...1,987,749
Ensembl chr16:1,984,193...1,987,749
JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3996734 RGD:2302171 NCBI chr14:52,775,193...52,791,607
Ensembl chr14:52,775,193...52,791,668
JBrowse link
G H19 H19 imprinted maternally expressed transcript ISO RGD PMID:8981228 RGD:1342456 NCBI chr11:1,995,176...2,001,266
Ensembl chr11:1,995,165...2,004,552
JBrowse link
G HES1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15578515) Ensembl
MGI
PMID:15578515 GO_REF:0000107 NCBI chr 3:194,136,148...194,138,732
Ensembl chr 3:194,136,148...194,138,732
JBrowse link
G HGF hepatocyte growth factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16880525) Ensembl
MGI
PMID:16880525 GO_REF:0000107 NCBI chr 7:81,699,010...81,770,047
Ensembl chr 7:81,699,010...81,770,438
JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:10804184), (PMID:16364283)
(PMID:11027604)
(PMID:15459110)
MGI PMID:10804184 PMID:11027604 PMID:15459110 PMID:16364283 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647
JBrowse link
G HLX H2.0 like homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:8557196) Ensembl
MGI
PMID:8557196 GO_REF:0000107 NCBI chr 1:220,879,443...220,885,059
Ensembl chr 1:220,879,431...220,885,059
JBrowse link
G HMBS hydroxymethylbilane synthase ISO RGD PMID:971328 RGD:25394583 NCBI chr11:119,084,881...119,093,549
Ensembl chr11:119,084,866...119,093,834
JBrowse link
G HMGCL 3-hydroxy-3-methylglutaryl-CoA lyase ISO RGD PMID:13990 RGD:2326149 NCBI chr 1:23,801,885...23,825,429
Ensembl chr 1:23,801,885...23,838,620
JBrowse link
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ISO RGD PMID:5166591 RGD:2326169 NCBI chr 5:43,287,470...43,313,412
Ensembl chr 5:43,287,470...43,313,512
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in ISO
IEA
RGD
Ensembl
PMID:8620869 GO_REF:0000107 RGD:2326125 NCBI chr 1:119,747,996...119,768,932
Ensembl chr 1:119,748,002...119,768,905
JBrowse link
G HNF1A HNF1 homeobox A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9566924) InterPro
MGI
PMID:9566924 GO_REF:0000002 NCBI chr12:120,978,543...121,002,512
Ensembl chr12:120,978,543...121,002,512
JBrowse link
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18635606) InterPro
MGI
Ensembl
PMID:18635606 GO_REF:0000002 GO_REF:0000107 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha involved_in IEA InterPro GO_REF:0000002 NCBI chr20:44,355,699...44,434,596
Ensembl chr20:44,355,699...44,432,845
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in ISO
IEA
RGD
Ensembl
PMID:20102719 GO_REF:0000107 RGD:10042969 NCBI chr 4:82,352,498...82,373,991
Ensembl chr 4:82,352,498...82,374,503
JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:16488668 RGD:10002779 NCBI chr 9:83,968,083...83,980,615
Ensembl chr 9:83,968,083...83,980,631
JBrowse link
G HP haptoglobin ISO RGD PMID:16172914 RGD:1625368 NCBI chr16:72,054,505...72,061,055
Ensembl chr16:72,054,505...72,061,055
JBrowse link
G HRAS HRas proto-oncogene, GTPase ISO RGD PMID:2581126 RGD:14694813 NCBI chr11:532,242...535,576
Ensembl chr11:532,242...537,321
JBrowse link
G ICMT isoprenylcysteine carboxyl methyltransferase acts_upstream_of_or_within ISO (PMID:12105862) MGI PMID:12105862 NCBI chr 1:6,221,193...6,235,964
Ensembl chr 1:6,221,193...6,235,972
JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (PMID:11773599), (PMID:9176412) MGI PMID:9176412 PMID:11773599 NCBI chr13:20,567,157...20,691,444
Ensembl chr13:20,567,138...20,691,444
JBrowse link
G IGF2R insulin like growth factor 2 receptor involved_in ISO
IEA
RGD
Ensembl
PMID:12127995 GO_REF:0000107 RGD:2311626 NCBI chr 6:159,969,082...160,111,504
Ensembl chr 6:159,969,082...160,113,507
JBrowse link
G INSR insulin receptor ISO RGD PMID:6364984 RGD:14701029 NCBI chr19:7,112,265...7,294,414
Ensembl chr19:7,112,255...7,294,414
JBrowse link
G JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9376320) Ensembl
MGI
PMID:9376320 GO_REF:0000107 NCBI chr 6:15,246,069...15,522,042
Ensembl chr 6:15,246,069...15,522,042
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:10352021) MGI PMID:10352021 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,776,845...58,784,048
JBrowse link
G KLF1 KLF transcription factor 1 acts_upstream_of_or_within ISO (PMID:7753194) MGI PMID:7753194 NCBI chr19:12,884,422...12,887,201
Ensembl chr19:12,884,422...12,887,201
JBrowse link
G KRAS KRAS proto-oncogene, GTPase ISO RGD PMID:1526114 RGD:11060153 NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
JBrowse link
G LBP lipopolysaccharide binding protein ISO RGD PMID:20978830 RGD:9685195 NCBI chr20:38,346,482...38,377,013
Ensembl chr20:38,346,482...38,377,013
JBrowse link
G LDHA lactate dehydrogenase A ISO RGD PMID:6849973 RGD:1600284 NCBI chr11:18,394,563...18,408,425
Ensembl chr11:18,394,560...18,408,425
JBrowse link
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24370824), (PMID:25147230) Ensembl
MGI
PMID:24370824 PMID:25147230 GO_REF:0000107 NCBI chr10:89,213,572...89,251,775
Ensembl chr10:89,213,569...89,414,557
JBrowse link
G LIPC lipase C, hepatic type ISO RGD PMID:11004003 RGD:2307448 NCBI chr15:58,431,991...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
G LSR lipolysis stimulated lipoprotein receptor involved_in IEA
ISS
Ensembl
HGNC
GO_REF:0000024 GO_REF:0000107 NCBI chr19:35,249,002...35,267,964
Ensembl chr19:35,248,330...35,267,964
JBrowse link
G MAN2A1 mannosidase alpha class 2A member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16754854) Ensembl
MGI
PMID:16754854 GO_REF:0000107 NCBI chr 5:109,689,927...109,869,625
Ensembl chr 5:109,689,927...109,869,625
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14500757) Ensembl
MGI
PMID:14500757 GO_REF:0000107 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G MEG3 maternally expressed 3 acts_upstream_of_or_within ISO (PMID:19264764) MGI PMID:19264764 NCBI chr14:100,826,108...100,861,026
Ensembl chr14:100,779,206...100,861,031
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:7651534) RGD
MGI
GO_Central
PMID:7651534 PMID:8506951 GO_REF:0000033 RGD:2317549 NCBI chr 7:116,672,196...116,798,377
Ensembl chr 7:116,672,196...116,798,377
JBrowse link
G MPST mercaptopyruvate sulfurtransferase involved_in ISO
IEA
RGD
Ensembl
PMID:6573924 GO_REF:0000107 RGD:9685558 NCBI chr22:37,019,742...37,029,815
Ensembl chr22:37,019,635...37,029,821
JBrowse link
G MRTFB myocardin related transcription factor B acts_upstream_of_or_within ISO (PMID:17183527) MGI PMID:17183527 NCBI chr16:13,994,774...14,266,779
Ensembl chr16:14,071,319...14,266,773
JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19632871) Ensembl
MGI
PMID:19632871 GO_REF:0000107 NCBI chr17:42,536,241...42,544,449
Ensembl chr17:42,536,241...42,544,449
JBrowse link
G NAT1 N-acetyltransferase 1 ISO RGD PMID:18799802 RGD:2303764 NCBI chr 8:18,170,467...18,223,689
Ensembl chr 8:18,170,477...18,223,689
JBrowse link
G NF1 neurofibromin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
(PMID:7926784) Ensembl
MGI
HGNC-UCL
PMID:7926784 GO_REF:0000024 GO_REF:0000107 NCBI chr17:31,094,927...31,377,677
Ensembl chr17:31,094,927...31,382,116
JBrowse link
G NKX2-8 NK2 homeobox 8 involved_in NAS (PMID:9446603) UniProt PMID:9446603 NCBI chr14:36,580,004...36,582,614
Ensembl chr14:36,580,004...36,582,614
JBrowse link
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11311163) Ensembl
MGI
PMID:11311163 GO_REF:0000107 NCBI chr10:70,431,936...70,447,951
Ensembl chr10:70,431,936...70,447,951
JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15226394) Ensembl
MGI
PMID:15226394 GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25446530) Ensembl
MGI
PMID:25446530 GO_REF:0000107 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779
JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21289032) Ensembl
MGI
PMID:21289032 GO_REF:0000107 NCBI chr18:23,506,184...23,586,506
Ensembl chr18:23,506,184...23,586,506
JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:17341476 RGD:401827282 NCBI chr11:47,248,300...47,269,033
Ensembl chr11:47,248,300...47,269,033
JBrowse link
G NTS neurotensin ISO RGD PMID:8342998 RGD:9743870 NCBI chr12:85,874,295...85,882,992
Ensembl chr12:85,874,295...85,882,992
JBrowse link
G ONECUT1 one cut homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17936262) Ensembl
MGI
PMID:17936262 GO_REF:0000107 NCBI chr15:52,755,053...52,790,336
Ensembl chr15:52,755,053...52,791,078
JBrowse link
G ONECUT2 one cut homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17936262) Ensembl
MGI
PMID:17936262 GO_REF:0000107 NCBI chr18:57,435,374...57,491,298
Ensembl chr18:57,435,374...57,491,298
JBrowse link
G OTC ornithine transcarbamylase involved_in ISO
IEA
RGD
Ensembl
PMID:8690412 GO_REF:0000107 RGD:4144072 NCBI chr  X:38,327,684...38,422,928
Ensembl chr  X:38,327,598...38,422,908
JBrowse link
G PCSK9 proprotein convertase subtilisin/kexin type 9 involved_in ISS
IEA
(PMID:12552133) HGNC-UCL
Ensembl
PMID:12552133 GO_REF:0000107 NCBI chr 1:55,039,548...55,064,852
Ensembl chr 1:55,039,445...55,064,852
JBrowse link
G PDX1 pancreatic and duodenal homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19619492) Ensembl
MGI
PMID:19619492 GO_REF:0000107 NCBI chr13:27,920,000...27,926,313
Ensembl chr13:27,920,000...27,926,313
JBrowse link
G PHF2 PHD finger protein 2 involved_in TAS (PMID:21532585) UniProt PMID:21532585 NCBI chr 9:93,576,584...93,679,587
Ensembl chr 9:93,576,584...93,679,587
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24691033) Ensembl
MGI
PMID:24691033 GO_REF:0000107 NCBI chr 3:179,148,126...179,240,093
Ensembl chr 3:179,148,114...179,240,093
JBrowse link
G PKD1 polycystin 1, transient receptor potential channel interacting involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21685914) Ensembl
MGI
PMID:21685914 GO_REF:0000107 NCBI chr16:2,088,708...2,135,898
Ensembl chr16:2,088,708...2,135,898
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in
acts_upstream_of_or_within
IEA
ISO
IEP
(PMID:21685914)
(PMID:11891195)
Ensembl
MGI
UniProt
PMID:11891195 PMID:21685914 GO_REF:0000107 NCBI chr 4:88,007,635...88,077,777
Ensembl chr 4:88,007,635...88,077,777
JBrowse link
G PKM pyruvate kinase M1/2 ISO RGD PMID:7327170 RGD:2303137 NCBI chr15:72,199,029...72,231,591
Ensembl chr15:72,199,029...72,231,819
JBrowse link
G PPDPF pancreatic progenitor cell differentiation and proliferation factor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:34031390) MGI
Ensembl
PMID:34031390 GO_REF:0000107 NCBI chr20:63,520,741...63,522,206
Ensembl chr20:63,520,754...63,527,076
JBrowse link
G PRKCSH PRKCSH beta subunit of glucosidase II involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:21685914) Ensembl
GO_Central
MGI
PMID:21685914 GO_REF:0000033 GO_REF:0000107 NCBI chr19:11,435,635...11,450,968
Ensembl chr19:11,435,284...11,450,968
JBrowse link
G PROC protein C, inactivator of coagulation factors Va and VIIIa acts_upstream_of_or_within ISO (PMID:9788960) RGD
MGI
PMID:7660357 PMID:9788960 RGD:1299299 NCBI chr 2:127,418,427...127,429,242
Ensembl chr 2:127,418,427...127,429,242
JBrowse link
G PROS1 protein S ISO RGD PMID:7660357 RGD:1299299 NCBI chr 3:93,873,051...93,973,896
Ensembl chr 3:93,873,051...93,980,003
JBrowse link
G PROX1 prospero homeobox 1 involved_in ISO
IEP
IEA
(PMID:11789987) RGD
BHF-UCL
Ensembl
PMID:11789987 PMID:16770575 GO_REF:0000107 RGD:5133274 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G PSMB9 proteasome 20S subunit beta 9 ISO RGD PMID:24707720 RGD:9854625 NCBI chr 6:32,854,192...32,859,851
Ensembl chr 6:32,844,136...32,860,734
JBrowse link
G PTCD2 pentatricopeptide repeat domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18729827) Ensembl
MGI
PMID:18729827 GO_REF:0000107 NCBI chr 5:72,320,373...72,368,395
Ensembl chr 5:72,320,367...72,368,395
JBrowse link
G PTN pleiotrophin ISO RGD PMID:12057922 RGD:727382 NCBI chr 7:137,227,341...137,343,733
Ensembl chr 7:137,227,341...137,343,774
JBrowse link
G QDPR quinoid dihydropteridine reductase ISO RGD PMID:710385 RGD:5128606 NCBI chr 4:17,486,395...17,512,090
Ensembl chr 4:17,460,261...17,512,206
JBrowse link
G RARA retinoic acid receptor alpha involved_in ISO
IEA
RGD
Ensembl
PMID:15388488 GO_REF:0000107 RGD:2314298 NCBI chr17:40,309,180...40,357,643
Ensembl chr17:40,309,180...40,357,643
JBrowse link
G RB1CC1 RB1 inducible coiled-coil 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17015619) Ensembl
MGI
PMID:17015619 GO_REF:0000107 NCBI chr 8:52,622,458...52,714,435
Ensembl chr 8:52,622,458...52,745,843
JBrowse link
G RCBTB2 RCC1 and BTB domain containing protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:26291700) MGI
Ensembl
PMID:26291700 GO_REF:0000107 NCBI chr13:48,488,963...48,535,895
Ensembl chr13:48,488,963...48,533,256
JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:65,653,601...65,663,857
Ensembl chr11:65,653,599...65,663,090
JBrowse link
G RGN regucalcin involved_in ISO
IEA
RGD
Ensembl
PMID:8794449 PMID:9546611 GO_REF:0000107 RGD:9590173 RGD:9590212 NCBI chr  X:47,078,443...47,093,313
Ensembl chr  X:47,078,355...47,093,314
JBrowse link
G RHBDD3 rhomboid domain containing 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23610400) Ensembl
MGI
PMID:23610400 GO_REF:0000107 NCBI chr22:29,259,852...29,268,163
Ensembl chr22:29,259,872...29,268,209
JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17558409) Ensembl
MGI
PMID:17558409 GO_REF:0000107 NCBI chr16:53,598,153...53,703,859
Ensembl chr16:53,598,153...53,703,938
JBrowse link
G RUNX1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO (PMID:16174759) MGI PMID:16174759 NCBI chr21:34,787,801...35,049,302
Ensembl chr21:34,787,801...36,004,667
JBrowse link
G RXRA retinoid X receptor alpha ISO RGD PMID:14729401 RGD:1643117 NCBI chr 9:134,326,455...134,440,585
Ensembl chr 9:134,317,098...134,440,585
JBrowse link
G SCO1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO (PMID:36301669) MGI PMID:36301669 NCBI chr17:10,672,474...10,697,533
Ensembl chr17:10,672,474...10,698,375
JBrowse link
G SEC63 SEC63 homolog, protein translocation regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21685914) Ensembl
MGI
PMID:21685914 GO_REF:0000107 NCBI chr 6:107,867,756...107,958,208
Ensembl chr 6:107,867,756...107,958,208
JBrowse link
G SLC25A4 solute carrier family 25 member 4 ISO RGD PMID:9468308 RGD:9681468 NCBI chr 4:185,143,266...185,150,382
Ensembl chr 4:185,143,266...185,150,382
JBrowse link
G SLCO1B3 solute carrier organic anion transporter family member 1B3 ISO RGD PMID:15288467 RGD:2303131 NCBI chr12:20,810,705...20,916,911
Ensembl chr12:20,810,702...20,916,911
JBrowse link
G SLCO2B1 solute carrier organic anion transporter family member 2B1 ISO RGD PMID:15345472 RGD:2316987 NCBI chr11:75,151,107...75,206,549
Ensembl chr11:75,100,563...75,206,549
JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:15183723) Ensembl
MGI
PMID:15183723 GO_REF:0000107 NCBI chr15:67,065,602...67,195,169
Ensembl chr15:67,063,763...67,195,173
JBrowse link
G SMARCA4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO (PMID:16287714) MGI PMID:16287714 NCBI chr19:10,961,030...11,062,273
Ensembl chr19:10,960,932...11,079,426
JBrowse link
G SOD2 superoxide dismutase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17367743) Ensembl
MGI
PMID:17367743 GO_REF:0000107 NCBI chr 6:159,669,069...159,762,281
Ensembl chr 6:159,669,069...159,762,529
JBrowse link
G SP1 Sp1 transcription factor acts_upstream_of_or_within ISO (PMID:17584888) MGI PMID:17584888 NCBI chr12:53,380,176...53,416,446
Ensembl chr12:53,380,176...53,416,446
JBrowse link
G SP3 Sp3 transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17584888) Ensembl
MGI
PMID:17584888 GO_REF:0000107 NCBI chr 2:173,900,775...173,965,702
Ensembl chr 2:173,880,850...173,965,373
JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:8770891 GO_REF:0000107 RGD:4892048 NCBI chr 5:6,633,440...6,674,386
Ensembl chr 5:6,633,290...6,676,539
JBrowse link
G SRSF5 serine and arginine rich splicing factor 5 ISO RGD PMID:9199345 RGD:11039429 NCBI chr14:69,767,142...69,772,005
Ensembl chr14:69,726,900...69,772,005
JBrowse link
G STAT5B signal transducer and activator of transcription 5B ISO RGD PMID:17565389 RGD:2291935 NCBI chr17:42,199,177...42,288,370
Ensembl chr17:42,199,176...42,288,633
JBrowse link
G TAF10 TATA-box binding protein associated factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18722179) Ensembl
MGI
PMID:18722179 GO_REF:0000107 NCBI chr11:6,606,294...6,612,216
Ensembl chr11:6,606,294...6,612,539
JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 1:91,680,343...91,906,002
Ensembl chr 1:91,680,343...91,906,335
JBrowse link
G THRA thyroid hormone receptor alpha ISO RGD PMID:17496154 RGD:2314319 NCBI chr17:40,062,193...40,093,867
Ensembl chr17:40,058,290...40,093,867
JBrowse link
G TK1 thymidine kinase 1 ISO RGD PMID:995499 RGD:2317236 NCBI chr17:78,174,079...78,187,204
Ensembl chr17:78,174,091...78,187,233
JBrowse link
G UGT1A1 UDP glucuronosyltransferase family 1 member A1 involved_in ISO
IEA
RGD
Ensembl
PMID:16310220 PMID:18938141 GO_REF:0000107 RGD:2315453 RGD:2317023 NCBI chr 2:233,760,270...233,773,300
Ensembl chr 2:233,760,270...233,773,300
JBrowse link
G UGT1A10 UDP glucuronosyltransferase family 1 member A10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:233,636,448...233,773,300
Ensembl chr 2:233,636,448...233,773,300
JBrowse link
G UGT1A3 UDP glucuronosyltransferase family 1 member A3 ISO RGD PMID:18938141 RGD:2317023 NCBI chr 2:233,729,042...233,773,300
Ensembl chr 2:233,729,042...233,773,300
JBrowse link
G UGT1A4 UDP glucuronosyltransferase family 1 member A4 ISO RGD PMID:18938141 RGD:2317023 NCBI chr 2:233,718,736...233,773,300
Ensembl chr 2:233,718,736...233,773,300
JBrowse link
G UGT1A6 UDP glucuronosyltransferase family 1 member A6 ISO RGD PMID:18938141 RGD:2317023 NCBI chr 2:233,691,702...233,773,300
Ensembl chr 2:233,691,607...233,773,300
JBrowse link
G UGT1A7 UDP glucuronosyltransferase family 1 member A7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:233,681,901...233,773,300
Ensembl chr 2:233,681,901...233,773,300
JBrowse link
G UGT1A8 UDP glucuronosyltransferase family 1 member A8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:233,617,633...233,773,300
Ensembl chr 2:233,617,633...233,773,300
JBrowse link
G UGT1A9 UDP glucuronosyltransferase family 1 member A9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:233,671,898...233,773,300
Ensembl chr 2:233,671,898...233,773,300
JBrowse link
G UPB1 beta-ureidopropionase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:6870258 GO_REF:0000107 RGD:2317093 NCBI chr22:24,495,332...24,528,390
Ensembl chr22:24,494,107...24,528,390
JBrowse link
G UPF2 UPF2 regulator of nonsense mediated mRNA decay involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20657840) Ensembl
MGI
PMID:20657840 GO_REF:0000107 NCBI chr10:11,920,022...12,043,170
Ensembl chr10:11,920,022...12,043,170
JBrowse link
G UROD uroporphyrinogen decarboxylase ISO RGD PMID:6219675 RGD:4145103 NCBI chr 1:45,012,254...45,015,575
Ensembl chr 1:45,010,950...45,015,575
JBrowse link
G VWF von Willebrand factor acts_upstream_of_or_within ISO (PMID:7854452) MGI PMID:7854452 NCBI chr12:5,948,877...6,124,670
Ensembl chr12:5,948,877...6,124,770
JBrowse link
G WNT4 Wnt family member 4 involved_in IEP (PMID:15312687) UniProt PMID:15312687 NCBI chr 1:22,117,313...22,143,097
Ensembl chr 1:22,117,313...22,143,969
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:28,794,560...28,800,569
Ensembl chr22:28,794,555...28,800,597
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23117660) Ensembl
MGI
PMID:23117660 GO_REF:0000107 NCBI chr 1:40,258,236...40,294,180
Ensembl chr 1:40,258,041...40,294,180
JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC39 coiled-coil domain 39 molecular ruler complex subunit involved_in IMP (PMID:22693285) BHF-UCL PMID:22693285 NCBI chr 3:180,614,008...180,679,489
Ensembl chr 3:180,602,858...180,684,942
JBrowse link
G CCDC40 coiled-coil domain 40 molecular ruler complex subunit involved_in IMP (PMID:22693285) BHF-UCL PMID:22693285 NCBI chr17:80,036,642...80,100,613
Ensembl chr17:80,036,632...80,100,613
JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 involved_in IMP (PMID:19944405) BHF-UCL PMID:19944405 NCBI chr16:84,145,308...84,177,920
Ensembl chr16:84,145,287...84,178,767
JBrowse link
G NPHP3 nephrocystin 3 involved_in IMP (PMID:20007846) BHF-UCL PMID:20007846 NCBI chr 3:132,680,609...132,722,409
Ensembl chr 3:132,680,609...132,722,432
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IMP (PMID:21719175) BHF-UCL PMID:21719175 NCBI chr 4:88,007,635...88,077,777
Ensembl chr 4:88,007,635...88,077,777
JBrowse link
G ZIC3 Zic family member 3 involved_in IMP (PMID:9354794) BHF-UCL PMID:9354794 NCBI chr  X:137,566,127...137,577,691
Ensembl chr  X:137,566,127...137,577,691
JBrowse link
hepatoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GGT1 gamma-glutamyltransferase 1 ISO RGD PMID:10934156 RGD:14701049 NCBI chr22:24,583,750...24,628,996
Ensembl chr22:24,594,811...24,629,005
JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:17580084) MGI PMID:17580084 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647
JBrowse link
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18635606) Ensembl
MGI
PMID:18635606 GO_REF:0000107 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059
JBrowse link
G TBX3 T-box transcription factor 3 involved_in
acts_upstream_of
IEA
ISO
(PMID:18356246) Ensembl
MGI
PMID:18356246 GO_REF:0000107 NCBI chr12:114,670,255...114,684,175
Ensembl chr12:114,670,255...114,684,175
JBrowse link
hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA1 annexin A1 ISO RGD PMID:11668598 RGD:2306909 NCBI chr 9:73,151,865...73,170,393
Ensembl chr 9:73,151,865...73,170,629
JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:12939595 GO_REF:0000107 RGD:4144098 NCBI chr 2:210,477,685...210,679,107
Ensembl chr 2:210,477,682...210,679,107
JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 involved_in ISO
IEA
RGD
Ensembl
PMID:17574236 GO_REF:0000107 RGD:2306655 NCBI chr15:74,719,542...74,725,528
Ensembl chr15:74,719,542...74,725,536
JBrowse link
G E2F7 E2F transcription factor 7 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr12:77,021,251...77,065,569
Ensembl chr12:77,021,248...77,065,569
JBrowse link
G E2F8 E2F transcription factor 8 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:19,224,063...19,241,655
Ensembl chr11:19,224,063...19,241,620
JBrowse link
G FOXH1 forkhead box H1 involved_in ISO
IEA
RGD
Ensembl
PMID:22715131 GO_REF:0000107 RGD:155791677 NCBI chr 8:144,473,412...144,475,849
Ensembl chr 8:144,473,412...144,475,849
JBrowse link
G FRZB frizzled related protein involved_in
acts_upstream_of
IEA
ISO
(PMID:19562671) Ensembl
MGI
PMID:19562671 GO_REF:0000107 NCBI chr 2:182,833,275...182,866,637
Ensembl chr 2:182,833,275...182,866,637
JBrowse link
G GGT1 gamma-glutamyltransferase 1 ISO RGD PMID:10934156 RGD:14701049 NCBI chr22:24,583,750...24,628,996
Ensembl chr22:24,594,811...24,629,005
JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (PMID:11027604) MGI PMID:11027604 NCBI chr10:92,689,955...92,695,647
Ensembl chr10:92,689,955...92,695,647
JBrowse link
G HNF1B HNF1 homeobox B ISO RGD PMID:18286537 RGD:2312718 NCBI chr17:37,686,431...37,745,059
Ensembl chr17:37,686,431...37,745,059
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha ISO RGD PMID:19621519 RGD:12904750 NCBI chr20:44,355,699...44,434,596
Ensembl chr20:44,355,699...44,432,845
JBrowse link
G ITGA2 integrin subunit alpha 2 involved_in ISO
IEA
RGD
Ensembl
PMID:16458388 GO_REF:0000107 RGD:2307397 NCBI chr 5:52,989,352...53,094,779
Ensembl chr 5:52,989,340...53,094,779
JBrowse link
G KRT18 keratin 18 ISO RGD PMID:24340101 PMID:28941653 RGD:27226712 RGD:27226713 NCBI chr12:52,948,855...52,952,906
Ensembl chr12:52,948,871...52,952,906
JBrowse link
G PCK1 phosphoenolpyruvate carboxykinase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:57,561,110...57,568,121
Ensembl chr20:57,561,080...57,568,121
JBrowse link
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:24,094,171...24,104,125
Ensembl chr14:24,094,053...24,110,598
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA
IEP
(PMID:15232737) Ensembl
BHF-UCL
PMID:15232737 GO_REF:0000107 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G SMARCB1 SWI/SNF related BAF chromatin remodeling complex subunit B1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16138077) Ensembl
MGI
PMID:16138077 GO_REF:0000107 NCBI chr22:23,786,966...23,838,009
Ensembl chr22:23,786,931...23,838,009
JBrowse link
G TAF10 TATA-box binding protein associated factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18722179) Ensembl
MGI
PMID:18722179 GO_REF:0000107 NCBI chr11:6,606,294...6,612,216
Ensembl chr11:6,606,294...6,612,539
JBrowse link
G WNT1 Wnt family member 1 involved_in ISO
IEA
RGD
Ensembl
PMID:20413689 GO_REF:0000107 RGD:2326223 NCBI chr12:48,978,322...48,982,620
Ensembl chr12:48,978,322...48,982,620
JBrowse link
hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEBPB CCAAT enhancer binding protein beta involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr20:50,190,583...50,192,690
Ensembl chr20:50,190,734...50,192,690
JBrowse link
G FGL1 fibrinogen like 1 involved_in IDA (PMID:19880967) UniProt PMID:19880967 NCBI chr 8:17,864,389...17,895,538
Ensembl chr 8:17,864,380...17,910,365
JBrowse link
G IL6 interleukin 6 involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G MKI67 marker of proliferation Ki-67 acts_upstream_of_or_within ISO (PMID:25446530) MGI PMID:25446530 NCBI chr10:128,096,659...128,126,423
Ensembl chr10:128,096,659...128,126,423
JBrowse link
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25446530) Ensembl
MGI
PMID:25446530 GO_REF:0000107 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779
JBrowse link
G PROX1 prospero homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10888866) Ensembl
MGI
PMID:10888866 GO_REF:0000107 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G RPS6KA1 ribosomal protein S6 kinase A1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:26,529,761...26,575,025
Ensembl chr 1:26,529,761...26,575,030
JBrowse link
G TGFA transforming growth factor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:70,447,284...70,553,826
Ensembl chr 2:70,447,284...70,554,193
JBrowse link
intrahepatic bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAK cyclin G associated kinase acts_upstream_of_or_within ISO (PMID:18434600) MGI PMID:18434600 NCBI chr 4:849,277...932,316
Ensembl chr 4:849,276...932,373
JBrowse link
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25446530) Ensembl
MGI
PMID:25446530 GO_REF:0000107 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19403103) Ensembl
MGI
PMID:19403103 GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416
JBrowse link
liver morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUL3 cullin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17339333) Ensembl
MGI
PMID:17339333 GO_REF:0000107 NCBI chr 2:224,470,150...224,585,363
Ensembl chr 2:224,470,150...224,585,397
JBrowse link
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24370824) Ensembl
MGI
PMID:24370824 GO_REF:0000107 NCBI chr10:89,213,572...89,251,775
Ensembl chr10:89,213,569...89,414,557
JBrowse link
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25446530) Ensembl
MGI
PMID:25446530 GO_REF:0000107 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within ISO (PMID:21803851) MGI PMID:21803851 NCBI chr 4:105,145,875...105,279,803
Ensembl chr 4:105,145,875...105,279,816
JBrowse link
liver regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:8855951 RGD:8548508 NCBI chr 5:148,826,611...148,828,623
Ensembl chr 5:148,826,611...148,828,623
JBrowse link
G AFP alpha fetoprotein ISO RGD PMID:2460696 RGD:126848734 NCBI chr 4:73,436,221...73,456,174
Ensembl chr 4:73,431,138...73,456,174
JBrowse link
G ALAS2 5'-aminolevulinate synthase 2 ISO RGD PMID:6895999 RGD:11035238 NCBI chr  X:55,009,055...55,030,977
Ensembl chr  X:55,009,055...55,030,977
JBrowse link
G ANGPT1 angiopoietin 1 ISO RGD PMID:11549276 RGD:704403 NCBI chr 8:107,249,482...107,497,918
Ensembl chr 8:107,249,482...107,498,055
JBrowse link
G AR androgen receptor ISO RGD PMID:2598758 RGD:407424617 NCBI chr  X:67,544,021...67,730,619
Ensembl chr  X:67,544,021...67,730,619
JBrowse link
G ATP2A3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 ISO RGD PMID:11032760 RGD:13782137 NCBI chr17:3,923,873...3,964,437
Ensembl chr17:3,923,868...3,964,464
JBrowse link
G AURKA aurora kinase A acts_upstream_of_or_within IDA (PMID:19435814) MGI PMID:19435814 NCBI chr20:56,369,390...56,392,215
Ensembl chr20:56,369,389...56,392,337
JBrowse link
G BCL2 BCL2 apoptosis regulator ISO RGD PMID:21503946 RGD:11531107 NCBI chr18:63,123,346...63,320,090
Ensembl chr18:63,123,346...63,320,128
JBrowse link
G CA3 carbonic anhydrase 3 ISO RGD PMID:19639563 RGD:408427362 NCBI chr 8:85,438,859...85,449,040
Ensembl chr 8:85,373,436...85,449,040
JBrowse link
G CCND1 cyclin D1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23740243) Ensembl
MGI
PMID:23740243 GO_REF:0000107 NCBI chr11:69,641,156...69,654,474
Ensembl chr11:69,641,156...69,654,474
JBrowse link
G CDK2 cyclin dependent kinase 2 ISO RGD PMID:15696186 PMID:16534847 RGD:2289284 RGD:2301349 NCBI chr12:55,966,830...55,972,789
Ensembl chr12:55,966,781...55,972,789
JBrowse link
G CEBPB CCAAT enhancer binding protein beta involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr20:50,190,583...50,192,690
Ensembl chr20:50,190,734...50,192,690
JBrowse link
G CFTR CF transmembrane conductance regulator ISO RGD PMID:1378998 RGD:11567227 NCBI chr 7:117,480,025...117,668,665
Ensembl chr 7:117,287,120...117,715,971
JBrowse link
G CLDN1 claudin 1 involved_in ISO
IEA
RGD
Ensembl
PMID:15826721 GO_REF:0000107 RGD:11344894 NCBI chr 3:190,305,707...190,322,446
Ensembl chr 3:190,305,707...190,322,446
JBrowse link
G CPB2 carboxypeptidase B2 involved_in ISO
IEA
RGD
Ensembl
PMID:19386599 GO_REF:0000107 RGD:7243112 NCBI chr13:46,053,186...46,105,033
Ensembl chr13:46,053,186...46,105,033
JBrowse link
G CPT1A carnitine palmitoyltransferase 1A involved_in ISO
IEA
RGD
Ensembl
PMID:31953200 GO_REF:0000107 RGD:25823179 NCBI chr11:68,754,620...68,844,277
Ensembl chr11:68,754,620...68,844,410
JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 ISO RGD PMID:8573159 RGD:11565141 NCBI chr20:472,498...543,790
Ensembl chr20:472,498...543,835
JBrowse link
G CSNK2A2 casein kinase 2 alpha 2 involved_in ISO
IEA
RGD
Ensembl
PMID:8573159 GO_REF:0000107 RGD:11565141 NCBI chr16:58,157,907...58,198,106
Ensembl chr16:58,157,907...58,198,106
JBrowse link
G CSNK2B casein kinase 2 beta ISO RGD PMID:8573159 RGD:11565141 NCBI chr 6:31,666,080...31,670,067
Ensembl chr 6:31,665,227...31,670,343
JBrowse link
G EGFR epidermal growth factor receptor involved_in ISO
IEA
RGD
Ensembl
PMID:2401457 PMID:20395437 GO_REF:0000107 RGD:10395295 RGD:38599218 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (PMID:25477280) MGI PMID:25477280 NCBI chr17:42,700,275...42,745,040
Ensembl chr17:42,700,275...42,745,049
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25477280) Ensembl
MGI
PMID:25477280 GO_REF:0000107 NCBI chr 7:148,807,383...148,884,291
Ensembl chr 7:148,807,257...148,884,321
JBrowse link
G FAS Fas cell surface death receptor ISO RGD PMID:10632538 RGD:8662889 NCBI chr10:88,964,050...89,017,059
Ensembl chr10:88,953,813...89,029,605
JBrowse link
G FGA fibrinogen alpha chain ISO RGD PMID:3817019 RGD:728788 NCBI chr 4:154,583,126...154,590,742
Ensembl chr 4:154,583,126...154,590,742
JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 ISO RGD PMID:16162160 RGD:10402121 NCBI chr13:28,300,346...28,495,128
Ensembl chr13:28,300,346...28,495,145
JBrowse link
G FLT3 fms related receptor tyrosine kinase 3 involved_in ISO
IEA
RGD
Ensembl
PMID:18031378 GO_REF:0000107 RGD:2302207 NCBI chr13:28,003,274...28,100,576
Ensembl chr13:28,003,274...28,100,592
JBrowse link
G GFER growth factor, augmenter of liver regeneration involved_in ISO
IEA
RGD
Ensembl
PMID:24880092 GO_REF:0000107 RGD:9685725 NCBI chr16:1,984,193...1,987,749
Ensembl chr16:1,984,193...1,987,749
JBrowse link
G GGT1 gamma-glutamyltransferase 1 ISO RGD PMID:10934156 RGD:14701049 NCBI chr22:24,583,750...24,628,996
Ensembl chr22:24,594,811...24,629,005
JBrowse link
G GLI1 GLI family zinc finger 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:23740243) RGD
Ensembl
MGI
PMID:22024090 PMID:22790641 PMID:23740243 GO_REF:0000107 RGD:12832760 RGD:12911223 NCBI chr12:57,459,785...57,472,268
Ensembl chr12:57,459,785...57,472,268
JBrowse link
G GLI3 GLI family zinc finger 3 ISO RGD PMID:22024090 RGD:12911223 NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100
JBrowse link
G GUCD1 guanylyl cyclase domain containing 1 involved_in ISO
IEA
RGD
Ensembl
PMID:24743017 GO_REF:0000107 RGD:151665336 NCBI chr22:24,540,438...24,555,894
Ensembl chr22:24,540,423...24,555,935
JBrowse link
G HAMP hepcidin antimicrobial peptide ISO RGD PMID:22364558 RGD:8694419 NCBI chr19:35,282,528...35,285,143
Ensembl chr19:35,280,716...35,285,143
JBrowse link
G HFE homeostatic iron regulator ISO RGD PMID:22364558 RGD:8694419 NCBI chr 6:26,087,429...26,098,343
Ensembl chr 6:26,087,226...26,098,343
JBrowse link
G HGF hepatocyte growth factor ISO RGD PMID:19638569 RGD:2313572 NCBI chr 7:81,699,010...81,770,047
Ensembl chr 7:81,699,010...81,770,438
JBrowse link
G HMOX1 heme oxygenase 1 ISO RGD PMID:24815159 RGD:10755743 NCBI chr22:35,381,096...35,394,207
Ensembl chr22:35,380,361...35,394,214
JBrowse link
G HSD3B7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ISO RGD PMID:16081591 RGD:1599972 NCBI chr16:30,985,207...30,989,147
Ensembl chr16:30,985,207...30,989,147
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in ISO
IEA
RGD
Ensembl
PMID:22024090 GO_REF:0000107 RGD:12911223 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921
JBrowse link
G IL10 interleukin 10 involved_in ISO
IEA
RGD
Ensembl
PMID:11813605 GO_REF:0000107 RGD:11049526 NCBI chr 1:206,767,602...206,772,494
Ensembl chr 1:206,767,602...206,774,541
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:24412291 RGD:14696652 NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,251...112,164,096
JBrowse link
G IL6 interleukin 6 involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:22,727,200...22,731,998
Ensembl chr 7:22,725,884...22,732,002
JBrowse link
G INSR insulin receptor ISO RGD PMID:23633480 RGD:9685423 NCBI chr19:7,112,265...7,294,414
Ensembl chr19:7,112,255...7,294,414
JBrowse link
G ITPR1 inositol 1,4,5-trisphosphate receptor type 1 ISO RGD PMID:24814243 RGD:13793384 NCBI chr 3:4,493,348...4,847,506
Ensembl chr 3:4,493,345...4,847,506
JBrowse link
G KLKB1 kallikrein B1 ISO RGD PMID:9869390 RGD:7297052 NCBI chr 4:186,210,853...186,258,471
Ensembl chr 4:186,226,438...186,258,471
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:3335218 RGD:10059623 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G NCL nucleolin ISO RGD PMID:7490256 RGD:9686389 NCBI chr 2:231,453,531...231,464,484
Ensembl chr 2:231,453,531...231,483,641
JBrowse link
G NFKBIA NFKB inhibitor alpha ISO RGD PMID:24446557 RGD:150429839 NCBI chr14:35,401,513...35,404,749
Ensembl chr14:35,401,079...35,404,749
JBrowse link
G NPM1 nucleophosmin 1 ISO RGD PMID:14635188 RGD:11534994 NCBI chr 5:171,387,116...171,410,900
Ensembl chr 5:171,387,116...171,411,810
JBrowse link
G PCNA proliferating cell nuclear antigen involved_in ISO
IEA
RGD
Ensembl
PMID:7906221 GO_REF:0000107 RGD:10448980 NCBI chr20:5,114,953...5,126,622
Ensembl chr20:5,114,953...5,126,626
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO
IEA
RGD
Ensembl
PMID:191106 GO_REF:0000107 RGD:11554175 NCBI chr 2:55,634,061...55,693,844
Ensembl chr 2:55,634,061...55,693,863
JBrowse link
G POU2F1 POU class 2 homeobox 1 ISO RGD PMID:1841628 RGD:9743904 NCBI chr 1:167,220,885...167,427,345
Ensembl chr 1:167,220,876...167,427,345
JBrowse link
G PRMT1 protein arginine methyltransferase 1 ISO RGD PMID:15837430 RGD:2299961 NCBI chr19:49,676,153...49,688,447
Ensembl chr19:49,675,786...49,689,029
JBrowse link
G PRMT5 protein arginine methyltransferase 5 involved_in ISO
IEA
RGD
Ensembl
PMID:15837430 GO_REF:0000107 RGD:2299961 NCBI chr14:22,920,529...22,929,376
Ensembl chr14:22,920,525...22,929,408
JBrowse link
G PTCH1 patched 1 involved_in ISO
IEA
RGD
Ensembl
PMID:22024090 GO_REF:0000107 RGD:12911223 NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
JBrowse link
G PTPN3 protein tyrosine phosphatase non-receptor type 3 involved_in ISO
IEA
RGD
Ensembl
PMID:7591957 GO_REF:0000107 RGD:1599982 NCBI chr 9:109,375,694...109,538,420
Ensembl chr 9:109,375,466...109,498,313
JBrowse link
G RAP1A RAP1A, member of RAS oncogene family ISO RGD PMID:9015365 RGD:10003155 NCBI chr 1:111,542,009...111,716,691
Ensembl chr 1:111,542,218...111,716,691
JBrowse link
G RAPGEF3 Rap guanine nucleotide exchange factor 3 ISO RGD PMID:22227930 RGD:9850085 NCBI chr12:47,734,363...47,758,880
Ensembl chr12:47,734,363...47,771,040
JBrowse link
G REG1A regenerating family member 1 alpha ISO RGD PMID:19284990 RGD:10044030 NCBI chr 2:79,120,488...79,123,409
Ensembl chr 2:79,120,362...79,123,409
JBrowse link
G RGN regucalcin involved_in ISO
IEA
RGD
Ensembl
PMID:7759556 GO_REF:0000107 RGD:9590197 NCBI chr  X:47,078,443...47,093,313
Ensembl chr  X:47,078,355...47,093,314
JBrowse link
G RPL10 ribosomal protein L10 ISO RGD PMID:6121318 RGD:11038709 NCBI chr  X:154,398,065...154,402,339
Ensembl chr  X:154,389,955...154,409,168
JBrowse link
G RPL13 ribosomal protein L13 ISO RGD PMID:6121318 RGD:11038709 NCBI chr16:89,560,657...89,566,829
Ensembl chr16:89,560,677...89,567,834
JBrowse link
G RPL18 ribosomal protein L18 ISO RGD PMID:6121318 RGD:11038709 NCBI chr19:48,615,331...48,619,178
Ensembl chr19:48,615,328...48,619,184
JBrowse link
G RPL19 ribosomal protein L19 ISO RGD PMID:6121318 RGD:11038709 NCBI chr17:39,200,283...39,204,732
Ensembl chr17:39,200,283...39,204,840
JBrowse link
G RPL30 ribosomal protein L30 ISO RGD PMID:6121318 RGD:11038709 NCBI chr 8:98,041,721...98,045,545
Ensembl chr 8:98,024,851...98,046,469
JBrowse link
G RPL32 ribosomal protein L32 ISO RGD PMID:6121318 RGD:11038709 NCBI chr 3:12,834,485...12,841,582
Ensembl chr 3:12,834,485...12,841,582
JBrowse link
G RPL7 ribosomal protein L7 ISO RGD PMID:6121318 RGD:11038709 NCBI chr 8:73,290,242...73,294,466
Ensembl chr 8:73,290,242...73,295,789
JBrowse link
G RPS15 ribosomal protein S15 ISO RGD PMID:2829897 RGD:11040696 NCBI chr19:1,438,396...1,440,495
Ensembl chr19:1,438,358...1,440,495
JBrowse link
G RPS16 ribosomal protein S16 ISO RGD PMID:6121318 RGD:11038709 NCBI chr19:39,433,137...39,435,949
Ensembl chr19:39,433,137...39,435,949
JBrowse link
G RPS24 ribosomal protein S24 ISO RGD PMID:7612009 RGD:11041663 NCBI chr10:78,033,863...78,056,806
Ensembl chr10:78,033,760...78,056,813
JBrowse link
G SERPINA10 serpin family A member 10 involved_in ISO
IEA
RGD
Ensembl
PMID:8670294 GO_REF:0000107 RGD:729731 NCBI chr14:94,280,460...94,293,268
Ensembl chr14:94,280,460...94,293,268
JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:22790641 RGD:12832760 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SLC7A5 solute carrier family 7 member 5 involved_in ISO
IEA
RGD
Ensembl
PMID:9882595 GO_REF:0000107 RGD:151357002 NCBI chr16:87,830,023...87,869,507
Ensembl chr16:87,830,016...87,869,507
JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in ISO
IEA
RGD
Ensembl
PMID:23633480 GO_REF:0000107 RGD:9685423 NCBI chr17:57,989,038...58,007,246
Ensembl chr17:58,000,919...58,007,346
JBrowse link
G SRSF5 serine and arginine rich splicing factor 5 ISO RGD PMID:7686911 RGD:729792 NCBI chr14:69,767,142...69,772,005
Ensembl chr14:69,726,900...69,772,005
JBrowse link
G SULF2 sulfatase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23740243) Ensembl
MGI
PMID:23740243 GO_REF:0000107 NCBI chr20:47,657,406...47,786,627
Ensembl chr20:47,656,197...47,786,616
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISO
IEA
RGD
Ensembl
PMID:25862490 GO_REF:0000107 RGD:11073669 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G TNF tumor necrosis factor involved_in ISO
IEA
RGD
Ensembl
PMID:9178702 GO_REF:0000107 RGD:14995465 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TYMS thymidylate synthetase involved_in ISO
IEA
RGD
Ensembl
PMID:2707640 GO_REF:0000107 RGD:2317422 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
JBrowse link
G UCP2 uncoupling protein 2 involved_in ISO
IEA
RGD
Ensembl
PMID:19104935 GO_REF:0000107 RGD:7204431 NCBI chr11:73,974,672...73,983,202
Ensembl chr11:73,974,061...73,982,843
JBrowse link
G VTN vitronectin involved_in ISO
IEA
RGD
Ensembl
PMID:10988248 GO_REF:0000107 RGD:10003090 NCBI chr17:28,367,284...28,370,307
Ensembl chr17:28,367,284...28,373,091
JBrowse link
G VWF von Willebrand factor ISO RGD PMID:12217600 RGD:727737 NCBI chr12:5,948,877...6,124,670
Ensembl chr12:5,948,877...6,124,770
JBrowse link
G WDR35 WD repeat domain 35 ISO RGD PMID:18472094 RGD:11553927 NCBI chr 2:19,910,263...19,990,105
Ensembl chr 2:19,910,263...19,990,105
JBrowse link
negative regulation of hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FRZB frizzled related protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19562671) Ensembl
MGI
PMID:19562671 GO_REF:0000107 NCBI chr 2:182,833,275...182,866,637
Ensembl chr 2:182,833,275...182,866,637
JBrowse link
negative regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN2A cyclin dependent kinase inhibitor 2A ISO RGD PMID:24190239 RGD:11252157 NCBI chr 9:21,967,752...21,995,324
Ensembl chr 9:21,967,752...21,995,301
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr19:42,507,306...42,528,481
Ensembl chr19:42,507,304...42,561,234
JBrowse link
G CPB2 carboxypeptidase B2 involved_in ISO
IEA
RGD
Ensembl
PMID:19386599 GO_REF:0000107 RGD:7243112 NCBI chr13:46,053,186...46,105,033
Ensembl chr13:46,053,186...46,105,033
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 4:152,320,544...152,536,092
Ensembl chr 4:152,320,544...152,536,092
JBrowse link
G LIMS1 LIM zinc finger domain containing 1 acts_upstream_of_or_within ISO (PMID:24058607) MGI PMID:24058607 NCBI chr 2:108,533,671...108,687,246
Ensembl chr 2:108,533,671...108,687,246
JBrowse link
G LIMS2 LIM zinc finger domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24058607) Ensembl
MGI
PMID:24058607 GO_REF:0000107 NCBI chr 2:127,638,426...127,681,786
Ensembl chr 2:127,638,381...127,681,786
JBrowse link
G SMO smoothened, frizzled class receptor ISO RGD PMID:22994359 RGD:150521663 NCBI chr 7:129,188,633...129,213,545
Ensembl chr 7:129,188,633...129,213,545
JBrowse link
positive regulation of hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 ISO RGD PMID:19229878 RGD:8885195 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G FOXA3 forkhead box A3 ISO RGD PMID:9878541 RGD:2315086 NCBI chr19:45,864,326...45,873,797
Ensembl chr19:45,863,989...45,873,797
JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in ISS
IEA
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:89,732,446...89,751,249
Ensembl chr15:89,749,875...89,751,249
JBrowse link
positive regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CFLAR CASP8 and FADD like apoptosis regulator involved_in ISO
IEA
RGD
Ensembl
PMID:16033771 GO_REF:0000107 RGD:11341689 NCBI chr 2:201,116,164...201,176,687
Ensembl chr 2:201,116,154...201,176,687
JBrowse link
G FGF1 fibroblast growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:142,592,178...142,698,070
Ensembl chr 5:142,592,178...142,698,070
JBrowse link
G FGF18 fibroblast growth factor 18 involved_in ISO PMID:16756958 UniProt PMID:16756958 RGD:10047366 NCBI chr 5:171,419,647...171,457,626
Ensembl chr 5:171,419,647...171,457,626
JBrowse link
G HPN hepsin involved_in IDA (PMID:15614436) UniProt PMID:15614436 NCBI chr19:35,040,506...35,066,573
Ensembl chr19:35,040,506...35,066,573
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:24412291 RGD:14696652 NCBI chr11:112,143,260...112,164,094
Ensembl chr11:112,143,251...112,164,096
JBrowse link
G ITPR1 inositol 1,4,5-trisphosphate receptor type 1 ISO RGD PMID:24814243 RGD:13793384 NCBI chr 3:4,493,348...4,847,506
Ensembl chr 3:4,493,345...4,847,506
JBrowse link
G MDK midkine involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:46,380,784...46,383,837
Ensembl chr11:46,380,756...46,383,837
JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17438330) Ensembl
MGI
PMID:17438330 GO_REF:0000107 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G PTN pleiotrophin involved_in ISO
IEA
ISS
RGD
Ensembl
UniProt
PMID:16226713 GO_REF:0000024 GO_REF:0000107 RGD:9834996 NCBI chr 7:137,227,341...137,343,733
Ensembl chr 7:137,227,341...137,343,774
JBrowse link
G RTN4 reticulon 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:54,972,189...55,137,831
Ensembl chr 2:54,972,187...55,112,621
JBrowse link
G TNF tumor necrosis factor involved_in ISO
IEA
with PCB 126 or TCDD RGD
Ensembl
PMID:9111198 PMID:17557910 GO_REF:0000107 RGD:14995469 RGD:14995481 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TNFAIP3 TNF alpha induced protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:137,866,349...137,883,312
Ensembl chr 6:137,867,214...137,883,314
JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23740243) Ensembl
MGI
PMID:23740243 GO_REF:0000107 NCBI chr 1:228,006,998...228,061,271
Ensembl chr 1:228,006,998...228,061,271
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:28,794,560...28,800,569
Ensembl chr22:28,794,555...28,800,597
JBrowse link
regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLI1 GLI family zinc finger 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23740243) Ensembl
MGI
PMID:23740243 GO_REF:0000107 NCBI chr12:57,459,785...57,472,268
Ensembl chr12:57,459,785...57,472,268
JBrowse link
G IFNG interferon gamma ISO RGD PMID:15799032 RGD:8142374 NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740
JBrowse link
G PLAU plasminogen activator, urokinase ISO RGD PMID:17587687 RGD:6484147 NCBI chr10:73,909,164...73,917,494
Ensembl chr10:73,909,177...73,917,496
JBrowse link
G SULF2 sulfatase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23740243) Ensembl
MGI
PMID:23740243 GO_REF:0000107 NCBI chr20:47,657,406...47,786,627
Ensembl chr20:47,656,197...47,786,616
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20486
    developmental process 7683
      anatomical structure development 7066
        animal organ development 3860
          gland development 674
            liver development 286
              determination of liver left/right asymmetry 6
              hepatoblast differentiation 4
              hepatocyte differentiation + 22
              intrahepatic bile duct development 3
              liver morphogenesis + 36
              liver regeneration 81
              liver trabecula formation 0
Path 2
Term Annotations click to browse term
  biological_process 20486
    developmental process 7683
      anatomical structure development 7066
        multicellular organism development 5678
          system development 4952
            hepaticobiliary system development 289
              liver development 286
                determination of liver left/right asymmetry 6
                hepatoblast differentiation 4
                hepatocyte differentiation + 22
                intrahepatic bile duct development 3
                liver morphogenesis + 36
                liver regeneration 81
                liver trabecula formation 0
paths to the root