NR1H3 (nuclear receptor subfamily 1 group H member 3) - Rat Genome Database
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Gene: NR1H3 (nuclear receptor subfamily 1 group H member 3) Homo sapiens
Analyze
Symbol: NR1H3
Name: nuclear receptor subfamily 1 group H member 3
RGD ID: 733364
HGNC Page HGNC
Description: Exhibits nuclear receptor activity and sterol response element binding activity. Involved in several processes, including cholesterol homeostasis; negative regulation of lipid localization; and positive regulation of cellular metabolic process. Localizes to several cellular components, including chromatin; cytosol; and nucleus. Implicated in obesity.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: CHOP; liver X nuclear receptor alpha variant 1; liver X receptor alpha; liver X receptor, alpha; liver X receptor-alpha; LXR-a; LXRA; nuclear receptor subfamily 1, group H, member 3; oxysterols receptor LXR-alpha; RLD-1; TLS/CHOP
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1147,248,300 - 47,269,033 (+)EnsemblGRCh38hg38GRCh38
GRCh381147,248,300 - 47,269,033 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371147,269,851 - 47,290,584 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361147,237,309 - 47,246,972 (+)NCBINCBI36hg18NCBI36
Build 341147,237,308 - 47,246,972NCBI
Celera1147,409,676 - 47,429,619 (+)NCBI
Cytogenetic Map11p11.2NCBI
HuRef1146,968,831 - 46,989,561 (+)NCBIHuRef
CHM1_11147,268,541 - 47,289,773 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(24S)-24-hydroxycholesterol  (EXP)
(25R)-cholest-5-ene-3beta,26-diol  (ISO)
(S)-nicotine  (EXP,ISO)
1-naphthyl isothiocyanate  (EXP)
17alpha-ethynylestradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-di-tert-butyl-4-methylphenol  (EXP)
2,6-dinitrotoluene  (ISO)
2-methyl-6-(phenylethynyl)pyridine  (EXP)
2-trans,6-trans,10-trans-geranylgeranyl diphosphate  (ISO)
22-Hydroxycholesterol  (EXP,ISO)
25-hydroxycholesterol  (EXP,ISO)
26-hydroxycholesterol  (ISO)
3-aminobenzamide  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (ISO)
3beta-hydroxycholest-5-en-26-oic acid  (EXP)
4,4-dimethyl-5alpha-cholesta-8,14,24-trien-3beta-ol  (ISO)
5-aza-2'-deoxycytidine  (EXP,ISO)
6-(4-chlorophenyl)imidazo[2,1-b][1,3]thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime  (EXP)
6-propyl-2-thiouracil  (ISO)
8-(4-chlorophenylthio)-cAMP  (ISO)
9-cis,11-trans-octadecadienoic acid  (ISO)
9-cis-retinoic acid  (EXP)
aflatoxin B1  (EXP)
aldehydo-D-glucose  (EXP,ISO)
all-trans-retinoic acid  (EXP)
allopurinol  (EXP,ISO)
ammonium chloride  (ISO)
androstane  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (EXP)
benzo[a]pyrene  (EXP,ISO)
bexarotene  (EXP)
bezafibrate  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bortezomib  (EXP)
bosentan  (EXP)
bucladesine  (ISO)
cadmium atom  (ISO)
cerium trichloride  (ISO)
chitosan  (ISO)
cholesterol  (EXP,ISO)
cholic acid  (ISO)
ciglitazone  (EXP)
ciprofibrate  (ISO)
cisplatin  (EXP)
clofibrate  (ISO)
copper(II) sulfate  (EXP)
curcumin  (EXP)
cycloheximide  (EXP)
cyclosporin A  (EXP)
D-gluconic acid  (ISO)
D-glucose  (EXP,ISO)
dexamethasone  (EXP,ISO)
disodium selenite  (ISO)
doxorubicin  (EXP)
elemental selenium  (ISO)
emodin  (EXP)
endosulfan  (ISO)
ethanol  (ISO)
etoposide  (EXP)
fenofibrate  (EXP,ISO)
finasteride  (ISO)
flavonoids  (ISO)
fumonisin B1  (ISO)
gemfibrozil  (EXP,ISO)
genistein  (EXP,ISO)
glucose  (EXP,ISO)
glycerol 2-phosphate  (EXP)
GW 3965  (EXP,ISO)
GW 501516  (EXP,ISO)
hexadecanoic acid  (ISO)
hydralazine  (EXP)
ketoconazole  (EXP,ISO)
kuwanone G  (ISO)
L-ascorbic acid  (EXP)
lansoprazole  (EXP)
lead diacetate  (ISO)
lead nitrate  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (ISO)
lithocholic acid  (ISO)
losartan  (ISO)
magnesium atom  (ISO)
melatonin  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (EXP)
mono(2-ethylhexyl) phthalate  (EXP)
monosodium L-glutamate  (EXP,ISO)
N-nitrosodiethylamine  (ISO)
NAD zwitterion  (EXP)
NAD(+)  (EXP)
nickel atom  (EXP,ISO)
nickel sulfate  (ISO)
nicotine  (EXP,ISO)
nicotinic acid  (EXP,ISO)
oleic acid  (EXP,ISO)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
Paxilline  (EXP)
perfluorohexanesulfonic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (ISO)
phorbol 13-acetate 12-myristate  (EXP)
pioglitazone  (EXP,ISO)
pirfenidone  (ISO)
pirinixic acid  (EXP,ISO)
pitavastatin  (ISO)
pitavastatin(1-)  (ISO)
platycodin D  (EXP)
pregnenolone 16alpha-carbonitrile  (ISO)
propiconazole  (ISO)
prostaglandin J2  (EXP)
quercetin  (EXP,ISO)
resveratrol  (EXP,ISO)
rifampicin  (EXP)
SB 203580  (EXP)
selenium atom  (ISO)
simvastatin  (ISO)
sirolimus  (EXP)
sodium arsenite  (ISO)
sodium cholate  (ISO)
streptozocin  (ISO)
teniposide  (EXP)
Tesaglitazar  (EXP)
testosterone  (ISO)
tetrachloromethane  (ISO)
tetramethylpyrazine  (EXP)
thioacetamide  (ISO)
titanium dioxide  (ISO)
topotecan  (ISO)
triadimefon  (ISO)
tributylstannane  (EXP,ISO)
Tributyltin oxide  (ISO)
triphenyl phosphate  (EXP)
troglitazone  (EXP)
uranium atom  (ISO)
valproic acid  (EXP)
vecuronium bromide  (EXP)
vitexin  (ISO)
zearalenone  (EXP)
zinc atom  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
apoptotic cell clearance  (IMP)
bile acid signaling pathway  (ISO)
cell differentiation  (IBA)
cellular lipid metabolic process  (ISO)
cellular response to lipopolysaccharide  (IDA,IEA,ISO)
cholesterol homeostasis  (IDA,IEA,ISO,ISS)
insulin receptor signaling pathway  (ISO)
intracellular receptor signaling pathway  (IEA,TAS)
lipid homeostasis  (ISO,ISS)
lipid metabolic process  (IEA,ISO)
negative regulation of cholesterol storage  (IEA,IMP,ISO)
negative regulation of cold-induced thermogenesis  (IEA,ISO,ISS)
negative regulation of inflammatory response  (IBA,IEA,ISO,ISS)
negative regulation of interferon-gamma-mediated signaling pathway  (NAS)
negative regulation of lipid transport  (IMP)
negative regulation of macrophage activation  (IEA,ISO,ISS)
negative regulation of macrophage derived foam cell differentiation  (IC)
negative regulation of pancreatic juice secretion  (IEA,ISO,ISS)
negative regulation of pinocytosis  (IMP)
negative regulation of proteolysis  (IEA,ISO)
negative regulation of response to endoplasmic reticulum stress  (IEA,ISO,ISS)
negative regulation of secretion of lysosomal enzymes  (IEA,ISO,ISS)
negative regulation of transcription by RNA polymerase II  (IBA,IEA,ISO,ISS)
negative regulation of transcription, DNA-templated  (ISO)
phosphatidylcholine acyl-chain remodeling  (IEA,ISO,ISS)
positive regulation of cellular protein metabolic process  (IMP)
positive regulation of cholesterol efflux  (IDA,IEA,IMP,ISO)
positive regulation of cholesterol transport  (IDA)
positive regulation of fatty acid biosynthetic process  (IMP)
positive regulation of lipoprotein lipase activity  (IMP)
positive regulation of toll-like receptor 4 signaling pathway  (IDA)
positive regulation of transcription by RNA polymerase II  (IBA,IDA,IEA,IMP,ISO)
positive regulation of transcription, DNA-templated  (IDA,IMP,ISO)
positive regulation of triglyceride biosynthetic process  (IMP)
regulation of circadian rhythm  (TAS)
regulation of transcription, DNA-templated  (IEA,ISO)
response to cholesterol  (ISO)
response to nutrient levels  (ISO)
response to progesterone  (IDA)
sterol homeostasis  (ISO,ISS)
transcription initiation from RNA polymerase II promoter  (TAS)
triglyceride homeostasis  (IEA,ISO,ISS)

Cellular Component
chromatin  (IDA,ISA)
cytoplasm  (IEA,ISO,ISS)
cytosol  (IDA)
nucleoplasm  (IDA,TAS)
nucleus  (IDA,IEA,ISO)
receptor complex  (IDA)
RNA polymerase II transcription regulator complex  (IDA,IEA,ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:7744246   PMID:8510758   PMID:8621574   PMID:9013544   PMID:9231657   PMID:9630215   PMID:10022764   PMID:11035776   PMID:11090131   PMID:11135616   PMID:11149950   PMID:11875109  
PMID:12032151   PMID:12040021   PMID:12054659   PMID:12117567   PMID:12161442   PMID:12198243   PMID:12470296   PMID:12477932   PMID:12663743   PMID:12724417   PMID:12932788   PMID:12957674  
PMID:14699103   PMID:14702039   PMID:15319359   PMID:15342556   PMID:15353176   PMID:15489334   PMID:15489335   PMID:15539633   PMID:15548517   PMID:15604093   PMID:15615782   PMID:15722453  
PMID:16054077   PMID:16106051   PMID:16141411   PMID:16143103   PMID:16170053   PMID:16249184   PMID:16341674   PMID:16344560   PMID:16354658   PMID:16482468   PMID:16567856   PMID:16758300  
PMID:16904112   PMID:16920108   PMID:16941683   PMID:16956579   PMID:16973760   PMID:17110595   PMID:17135302   PMID:17186944   PMID:17217555   PMID:17218271   PMID:17255360   PMID:17272748  
PMID:17296605   PMID:17391100   PMID:17396233   PMID:17405904   PMID:17416342   PMID:17452725   PMID:17628006   PMID:17644777   PMID:17693624   PMID:17724434   PMID:17766241   PMID:17845217  
PMID:17936707   PMID:17960176   PMID:18007013   PMID:18024509   PMID:18096827   PMID:18182682   PMID:18209740   PMID:18250151   PMID:18276933   PMID:18327405   PMID:18372238   PMID:18511497  
PMID:18562803   PMID:18636124   PMID:18660489   PMID:18669643   PMID:18789440   PMID:18854425   PMID:19060910   PMID:19105208   PMID:19119143   PMID:19164445   PMID:19201410   PMID:19211025  
PMID:19229075   PMID:19261092   PMID:19274049   PMID:19292929   PMID:19360318   PMID:19366697   PMID:19380774   PMID:19426978   PMID:19436111   PMID:19481530   PMID:19628791   PMID:19645823  
PMID:19697157   PMID:19796621   PMID:19798078   PMID:19837721   PMID:19913121   PMID:19933273   PMID:20005944   PMID:20037595   PMID:20057170   PMID:20080977   PMID:20118482   PMID:20139031  
PMID:20190811   PMID:20211142   PMID:20219900   PMID:20237496   PMID:20364260   PMID:20410489   PMID:20494359   PMID:20506155   PMID:20628086   PMID:20655109   PMID:20682316   PMID:20686565  
PMID:20836841   PMID:20837115   PMID:20855565   PMID:20868688   PMID:20945144   PMID:21042792   PMID:21125317   PMID:21136146   PMID:21173252   PMID:21187453   PMID:21245992   PMID:21266776  
PMID:21268089   PMID:21310851   PMID:21315073   PMID:21316679   PMID:21349840   PMID:21350215   PMID:21356276   PMID:21440016   PMID:21516116   PMID:21562465   PMID:21625070   PMID:21775116  
PMID:21832049   PMID:21873635   PMID:21889884   PMID:21903943   PMID:21937108   PMID:21951066   PMID:21988832   PMID:22027013   PMID:22137263   PMID:22257474   PMID:22311022   PMID:22367754  
PMID:22399489   PMID:22399527   PMID:22457708   PMID:22503545   PMID:22547570   PMID:22569763   PMID:22610535   PMID:22623531   PMID:22634718   PMID:22641099   PMID:22707265   PMID:22723445  
PMID:22749359   PMID:22766509   PMID:22916038   PMID:22939624   PMID:22969086   PMID:22984430   PMID:22990668   PMID:23018104   PMID:23041609   PMID:23099324   PMID:23163651   PMID:23185273  
PMID:23313547   PMID:23393188   PMID:23416078   PMID:23451202   PMID:23455924   PMID:23496987   PMID:23564066   PMID:23680128   PMID:23686114   PMID:23732298   PMID:23733886   PMID:23812424  
PMID:23838803   PMID:23867395   PMID:24009820   PMID:24036496   PMID:24100084   PMID:24118845   PMID:24180251   PMID:24265317   PMID:24278306   PMID:24289152   PMID:24533572   PMID:24618263  
PMID:24713062   PMID:24751522   PMID:24832115   PMID:24842676   PMID:24886807   PMID:24996838   PMID:25005769   PMID:25028566   PMID:25035925   PMID:25073010   PMID:25102981   PMID:25187371  
PMID:25255963   PMID:25264165   PMID:25283515   PMID:25332231   PMID:25416956   PMID:25437875   PMID:25450400   PMID:25600616   PMID:25659329   PMID:25661920   PMID:25729942   PMID:25779847  
PMID:25867319   PMID:25910212   PMID:25962847   PMID:25980575   PMID:26120082   PMID:26160456   PMID:26186194   PMID:26261553   PMID:26379423   PMID:26469385   PMID:26595172   PMID:26602218  
PMID:26635040   PMID:26669941   PMID:26692490   PMID:26756785   PMID:26814197   PMID:26871637   PMID:26964694   PMID:26991262   PMID:27016616   PMID:27253448   PMID:27343431   PMID:27351826  
PMID:27401066   PMID:27485016   PMID:27489081   PMID:27490478   PMID:27614433   PMID:27736929   PMID:27743553   PMID:27832630   PMID:28011707   PMID:28091828   PMID:28119310   PMID:28178657  
PMID:28270440   PMID:28361293   PMID:28420650   PMID:28508927   PMID:28514442   PMID:28617824   PMID:28676625   PMID:28739689   PMID:29230000   PMID:29367626   PMID:29420090   PMID:29446839  
PMID:29577901   PMID:29801879   PMID:30393020   PMID:30413149   PMID:30623435   PMID:30692632   PMID:30770793   PMID:30944547   PMID:30964702   PMID:31104333   PMID:31243309   PMID:31417573  
PMID:31432166   PMID:31515488   PMID:31670283   PMID:31931135   PMID:32208992   PMID:32296183   PMID:32745694   PMID:33141061  


Genomics

Comparative Map Data
NR1H3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1147,248,300 - 47,269,033 (+)EnsemblGRCh38hg38GRCh38
GRCh381147,248,300 - 47,269,033 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371147,269,851 - 47,290,584 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361147,237,309 - 47,246,972 (+)NCBINCBI36hg18NCBI36
Build 341147,237,308 - 47,246,972NCBI
Celera1147,409,676 - 47,429,619 (+)NCBI
Cytogenetic Map11p11.2NCBI
HuRef1146,968,831 - 46,989,561 (+)NCBIHuRef
CHM1_11147,268,541 - 47,289,773 (+)NCBICHM1_1
Nr1h3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39291,014,406 - 91,033,189 (-)NCBIGRCm39mm39
GRCm39 Ensembl291,014,406 - 91,033,179 (-)Ensembl
GRCm38291,184,061 - 91,202,829 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl291,184,061 - 91,202,834 (-)EnsemblGRCm38mm10GRCm38
MGSCv37291,024,218 - 91,035,273 (-)NCBIGRCm37mm9NCBIm37
MGSCv36290,984,949 - 90,995,955 (-)NCBImm8
Celera292,568,901 - 92,580,220 (-)NCBICelera
Cytogenetic Map2E1NCBI
cM Map250.52NCBI
Nr1h3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2377,158,808 - 77,168,907 (-)NCBI
Rnor_6.0 Ensembl380,004,130 - 80,012,750 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0380,004,130 - 80,014,197 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0386,712,883 - 86,722,950 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4375,542,211 - 75,550,793 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1375,438,551 - 75,447,172 (-)NCBI
Celera376,367,211 - 76,375,760 (-)NCBICelera
Cytogenetic Map3q24NCBI
Nr1h3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955422940,310 - 949,049 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955422940,310 - 954,170 (-)NCBIChiLan1.0ChiLan1.0
NR1H3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11147,748,452 - 47,768,672 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1147,748,353 - 47,768,672 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01147,195,122 - 47,215,277 (+)NCBIMhudiblu_PPA_v0panPan3
NR1H3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1842,333,202 - 42,341,236 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11842,333,173 - 42,346,152 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Nr1h3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365621,937,665 - 1,946,680 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NR1H3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl215,270,789 - 15,334,820 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1215,315,283 - 15,336,785 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2216,539,892 - 16,560,353 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NR1H3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1118,041,495 - 18,061,196 (-)NCBI
ChlSab1.1 Ensembl118,041,830 - 18,051,501 (-)Ensembl
Nr1h3
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247671,459,601 - 1,473,224 (-)NCBI

Position Markers
PMC33205P3  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371147,289,870 - 47,290,125UniSTSGRCh37
Build 361147,246,446 - 47,246,701RGDNCBI36
Celera1147,429,088 - 47,429,343RGD
Cytogenetic Map11p11.2UniSTS
HuRef1146,988,847 - 46,989,102UniSTS
PMC99927P1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371147,289,869 - 47,290,195UniSTSGRCh37
Build 361147,246,445 - 47,246,771RGDNCBI36
Celera1147,429,087 - 47,429,413RGD
Cytogenetic Map11p11.2UniSTS
HuRef1146,988,846 - 46,989,172UniSTS
NR1H3_7962  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371147,290,095 - 47,290,595UniSTSGRCh37
Build 361147,246,671 - 47,247,171RGDNCBI36
Celera1147,429,313 - 47,429,813RGD
HuRef1146,989,072 - 46,989,572UniSTS
STS-U22662  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371147,290,114 - 47,290,349UniSTSGRCh37
GRCh371147,290,239 - 47,290,352UniSTSGRCh37
Build 361147,246,815 - 47,246,928RGDNCBI36
Celera1147,429,457 - 47,429,570RGD
Celera1147,429,332 - 47,429,567UniSTS
Cytogenetic Map11p11.2UniSTS
HuRef1146,989,091 - 46,989,326UniSTS
HuRef1146,989,216 - 46,989,329UniSTS
GeneMap99-GB4 RH Map11167.74UniSTS
RH79033  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371147,289,878 - 47,290,257UniSTSGRCh37
Build 361147,246,454 - 47,246,833RGDNCBI36
Celera1147,429,096 - 47,429,475RGD
Cytogenetic Map11p11.2UniSTS
HuRef1146,988,855 - 46,989,234UniSTS
GeneMap99-GB4 RH Map11168.33UniSTS
ksks34  
Human AssemblyChrPosition (strand)SourceJBrowse
HuRef1146,988,517 - 46,988,812UniSTS
STS-U22662  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11p11.2UniSTS
GeneMap99-GB4 RH Map11167.87UniSTS

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR613hsa-miR-613Mirtarbaseexternal_infoLuciferase reporter assayFunctional MTI23496987

Predicted Target Of
Summary Value
Count of predictions:9654
Count of miRNA genes:1133
Interacting mature miRNAs:1437
Transcripts:ENST00000395397, ENST00000405576, ENST00000405853, ENST00000407404, ENST00000412937, ENST00000419652, ENST00000420369, ENST00000436029, ENST00000436778, ENST00000437276, ENST00000441012, ENST00000444396, ENST00000449369, ENST00000457932, ENST00000461778, ENST00000462051, ENST00000467728, ENST00000473222, ENST00000476086, ENST00000481020, ENST00000481889, ENST00000483882, ENST00000486991, ENST00000487913, ENST00000494018, ENST00000495866, ENST00000498548, ENST00000525441, ENST00000527464, ENST00000527949, ENST00000529540, ENST00000530310, ENST00000531660, ENST00000532630
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 1645 823 1395 502 567 443 2164 513 756 299 1221 1373 65 1202 1113 3
Low 794 2158 330 122 1374 22 2192 1683 2973 119 239 240 109 1 2 1675 3 2
Below cutoff 9 1 10 1 3 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_030392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001130101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001130102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001251934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001251935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001363595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_005693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005252706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005252713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005252718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011519805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011519806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011519807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011519808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017017056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017017057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024448302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA644385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB307698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC018410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI097478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI648486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK290614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK302132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK309027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK311590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK313311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AU133574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AU135617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC041172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM835230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP300071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BT019411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV026805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ692819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT584938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U22662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000395397   ⟹   ENSP00000378793
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,916 - 47,268,812 (+)Ensembl
RefSeq Acc Id: ENST00000405576   ⟹   ENSP00000385073
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,916 - 47,268,843 (+)Ensembl
RefSeq Acc Id: ENST00000405853   ⟹   ENSP00000384745
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,998 - 47,268,843 (+)Ensembl
RefSeq Acc Id: ENST00000407404   ⟹   ENSP00000385801
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,956 - 47,268,781 (+)Ensembl
RefSeq Acc Id: ENST00000412937   ⟹   ENSP00000412636
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,658 - 47,261,280 (+)Ensembl
RefSeq Acc Id: ENST00000419652   ⟹   ENSP00000407716
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,710 - 47,259,823 (+)Ensembl
RefSeq Acc Id: ENST00000420369   ⟹   ENSP00000406692
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,996 - 47,261,345 (+)Ensembl
RefSeq Acc Id: ENST00000436029   ⟹   ENSP00000403696
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,971 - 47,261,377 (+)Ensembl
RefSeq Acc Id: ENST00000436778   ⟹   ENSP00000403798
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,927 - 47,261,347 (+)Ensembl
RefSeq Acc Id: ENST00000437276   ⟹   ENSP00000396132
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,963 - 47,259,952 (+)Ensembl
RefSeq Acc Id: ENST00000441012   ⟹   ENSP00000387946
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,996 - 47,269,033 (+)Ensembl
RefSeq Acc Id: ENST00000444396   ⟹   ENSP00000391005
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,604 - 47,261,322 (+)Ensembl
RefSeq Acc Id: ENST00000449369   ⟹   ENSP00000415591
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,697 - 47,261,356 (+)Ensembl
RefSeq Acc Id: ENST00000457932   ⟹   ENSP00000413095
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,623 - 47,259,979 (+)Ensembl
RefSeq Acc Id: ENST00000461778
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,917 - 47,261,280 (+)Ensembl
RefSeq Acc Id: ENST00000462051
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,267,945 - 47,268,844 (+)Ensembl
RefSeq Acc Id: ENST00000467728   ⟹   ENSP00000420656
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,979 - 47,268,845 (+)Ensembl
RefSeq Acc Id: ENST00000473222
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,259,464 - 47,260,625 (+)Ensembl
RefSeq Acc Id: ENST00000476086
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,258,001 - 47,260,678 (+)Ensembl
RefSeq Acc Id: ENST00000481020
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,924 - 47,268,831 (+)Ensembl
RefSeq Acc Id: ENST00000481889   ⟹   ENSP00000433271
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,924 - 47,268,831 (+)Ensembl
RefSeq Acc Id: ENST00000483882
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,259,587 - 47,260,587 (+)Ensembl
RefSeq Acc Id: ENST00000486991
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,708 - 47,258,506 (+)Ensembl
RefSeq Acc Id: ENST00000487913
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,927 - 47,262,019 (+)Ensembl
RefSeq Acc Id: ENST00000494018
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,268,141 - 47,268,844 (+)Ensembl
RefSeq Acc Id: ENST00000495866
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,300 - 47,260,506 (+)Ensembl
RefSeq Acc Id: ENST00000498548
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,258,880 - 47,259,969 (+)Ensembl
RefSeq Acc Id: ENST00000525441
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,257,970 - 47,261,421 (+)Ensembl
RefSeq Acc Id: ENST00000527464
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,300 - 47,261,974 (+)Ensembl
RefSeq Acc Id: ENST00000527949   ⟹   ENSP00000432073
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,260,397 - 47,268,817 (+)Ensembl
RefSeq Acc Id: ENST00000529540
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,311 - 47,268,838 (+)Ensembl
RefSeq Acc Id: ENST00000530310
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,258,106 - 47,260,616 (+)Ensembl
RefSeq Acc Id: ENST00000531660   ⟹   ENSP00000434650
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,927 - 47,268,008 (+)Ensembl
RefSeq Acc Id: ENST00000532630
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,927 - 47,268,816 (+)Ensembl
RefSeq Acc Id: ENST00000616973   ⟹   ENSP00000477707
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1147,248,300 - 47,269,032 (+)Ensembl
RefSeq Acc Id: NM_001130101   ⟹   NP_001123573
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,996 - 47,269,033 (+)NCBI
GRCh371147,269,851 - 47,290,584 (+)NCBI
HuRef1146,968,831 - 46,989,561 (+)NCBI
CHM1_11147,278,658 - 47,289,773 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001130102   ⟹   NP_001123574
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,895 - 47,269,033 (+)NCBI
GRCh371147,269,851 - 47,290,584 (+)NCBI
HuRef1146,968,831 - 46,989,561 (+)NCBI
CHM1_11147,269,139 - 47,289,773 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001251934   ⟹   NP_001238863
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,300 - 47,269,033 (+)NCBI
GRCh371147,269,851 - 47,290,584 (+)NCBI
HuRef1146,968,831 - 46,989,561 (+)NCBI
CHM1_11147,268,541 - 47,289,773 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001251935   ⟹   NP_001238864
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,300 - 47,269,033 (+)NCBI
GRCh371147,269,851 - 47,290,584 (+)NCBI
HuRef1146,968,831 - 46,989,561 (+)NCBI
CHM1_11147,268,541 - 47,289,773 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001363595   ⟹   NP_001350524
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,707 - 47,269,033 (+)NCBI
RefSeq Acc Id: NM_005693   ⟹   NP_005684
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,996 - 47,269,033 (+)NCBI
GRCh371147,269,851 - 47,290,584 (+)NCBI
Build 361147,237,309 - 47,246,972 (+)NCBI Archive
HuRef1146,968,831 - 46,989,561 (+)NCBI
CHM1_11147,278,658 - 47,289,773 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005252706   ⟹   XP_005252763
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,623 - 47,268,846 (+)NCBI
GRCh371147,269,851 - 47,290,584 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005252713   ⟹   XP_005252770
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,912 - 47,268,846 (+)NCBI
GRCh371147,269,851 - 47,290,584 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005252718   ⟹   XP_005252775
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,895 - 47,268,846 (+)NCBI
GRCh371147,269,851 - 47,290,584 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011519805   ⟹   XP_011518107
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,915 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011519806   ⟹   XP_011518108
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,258,001 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011519807   ⟹   XP_011518109
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,996 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011519808   ⟹   XP_011518110
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,911 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017017056   ⟹   XP_016872545
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,258,001 - 47,268,298 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017017057   ⟹   XP_016872546
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,258,001 - 47,268,174 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448284   ⟹   XP_024304052
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,704 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448285   ⟹   XP_024304053
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,752 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448286   ⟹   XP_024304054
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,904 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448287   ⟹   XP_024304055
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,623 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448288   ⟹   XP_024304056
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,910 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448289   ⟹   XP_024304057
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,258,001 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448290   ⟹   XP_024304058
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,962 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448291   ⟹   XP_024304059
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,708 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448292   ⟹   XP_024304060
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,898 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448293   ⟹   XP_024304061
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,258,106 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448294   ⟹   XP_024304062
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,913 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448295   ⟹   XP_024304063
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,658 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448296   ⟹   XP_024304064
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,996 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448297   ⟹   XP_024304065
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,970 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448298   ⟹   XP_024304066
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,249,065 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448299   ⟹   XP_024304067
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,894 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448300   ⟹   XP_024304068
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,708 - 47,268,846 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024448302   ⟹   XP_024304070
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,905 - 47,268,846 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001123573 (Get FASTA)   NCBI Sequence Viewer  
  NP_001123574 (Get FASTA)   NCBI Sequence Viewer  
  NP_001238863 (Get FASTA)   NCBI Sequence Viewer  
  NP_001238864 (Get FASTA)   NCBI Sequence Viewer  
  NP_001350524 (Get FASTA)   NCBI Sequence Viewer  
  NP_005684 (Get FASTA)   NCBI Sequence Viewer  
  XP_005252763 (Get FASTA)   NCBI Sequence Viewer  
  XP_005252770 (Get FASTA)   NCBI Sequence Viewer  
  XP_005252775 (Get FASTA)   NCBI Sequence Viewer  
  XP_011518107 (Get FASTA)   NCBI Sequence Viewer  
  XP_011518108 (Get FASTA)   NCBI Sequence Viewer  
  XP_011518109 (Get FASTA)   NCBI Sequence Viewer  
  XP_011518110 (Get FASTA)   NCBI Sequence Viewer  
  XP_016872545 (Get FASTA)   NCBI Sequence Viewer  
  XP_016872546 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304052 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304053 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304054 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304055 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304056 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304057 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304058 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304059 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304060 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304061 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304062 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304063 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304064 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304065 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304066 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304067 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304068 (Get FASTA)   NCBI Sequence Viewer  
  XP_024304070 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA85856 (Get FASTA)   NCBI Sequence Viewer  
  AAH08819 (Get FASTA)   NCBI Sequence Viewer  
  AAH41172 (Get FASTA)   NCBI Sequence Viewer  
  AAV38218 (Get FASTA)   NCBI Sequence Viewer  
  ADZ17330 (Get FASTA)   NCBI Sequence Viewer  
  BAF83303 (Get FASTA)   NCBI Sequence Viewer  
  BAG36116 (Get FASTA)   NCBI Sequence Viewer  
  BAG53649 (Get FASTA)   NCBI Sequence Viewer  
  BAG63507 (Get FASTA)   NCBI Sequence Viewer  
  BAH02289 (Get FASTA)   NCBI Sequence Viewer  
  EAW67942 (Get FASTA)   NCBI Sequence Viewer  
  EAW67943 (Get FASTA)   NCBI Sequence Viewer  
  EAW67944 (Get FASTA)   NCBI Sequence Viewer  
  EAW67945 (Get FASTA)   NCBI Sequence Viewer  
  EAW67946 (Get FASTA)   NCBI Sequence Viewer  
  EAW67947 (Get FASTA)   NCBI Sequence Viewer  
  EAW67948 (Get FASTA)   NCBI Sequence Viewer  
  EAW67949 (Get FASTA)   NCBI Sequence Viewer  
  Q13133 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001123574   ⟸   NM_001130102
- Peptide Label: isoform 3
- UniProtKB: Q13133 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_005684   ⟸   NM_005693
- Peptide Label: isoform 1
- UniProtKB: Q13133 (UniProtKB/Swiss-Prot),   B4DXU5 (UniProtKB/TrEMBL),   F1D8N1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001123573   ⟸   NM_001130101
- Peptide Label: isoform 2
- UniProtKB: Q13133 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001238864   ⟸   NM_001251935
- Peptide Label: isoform 4
- UniProtKB: B4DXU5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001238863   ⟸   NM_001251934
- Peptide Label: isoform 4
- UniProtKB: B4DXU5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005252775   ⟸   XM_005252718
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_005252770   ⟸   XM_005252713
- Peptide Label: isoform X11
- UniProtKB: Q13133 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005252763   ⟸   XM_005252706
- Peptide Label: isoform X5
- UniProtKB: Q13133 (UniProtKB/Swiss-Prot),   F1D8N1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011518110   ⟸   XM_011519808
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_011518107   ⟸   XM_011519805
- Peptide Label: isoform X5
- UniProtKB: Q13133 (UniProtKB/Swiss-Prot),   F1D8N1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011518109   ⟸   XM_011519807
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_011518108   ⟸   XM_011519806
- Peptide Label: isoform X7
- UniProtKB: B5MBY7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016872545   ⟸   XM_017017056
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_016872546   ⟸   XM_017017057
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_024304067   ⟸   XM_024448299
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_024304060   ⟸   XM_024448292
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_024304070   ⟸   XM_024448302
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_024304056   ⟸   XM_024448288
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024304062   ⟸   XM_024448294
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_024304066   ⟸   XM_024448298
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_024304055   ⟸   XM_024448287
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024304063   ⟸   XM_024448295
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_024304052   ⟸   XM_024448284
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024304059   ⟸   XM_024448291
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_024304068   ⟸   XM_024448300
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_024304053   ⟸   XM_024448285
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024304054   ⟸   XM_024448286
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024304058   ⟸   XM_024448290
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_024304065   ⟸   XM_024448297
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_024304064   ⟸   XM_024448296
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_024304057   ⟸   XM_024448289
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_024304061   ⟸   XM_024448293
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: NP_001350524   ⟸   NM_001363595
- Peptide Label: isoform 5
RefSeq Acc Id: ENSP00000412636   ⟸   ENST00000412937
RefSeq Acc Id: ENSP00000434650   ⟸   ENST00000531660
RefSeq Acc Id: ENSP00000420656   ⟸   ENST00000467728
RefSeq Acc Id: ENSP00000387946   ⟸   ENST00000441012
RefSeq Acc Id: ENSP00000433271   ⟸   ENST00000481889
RefSeq Acc Id: ENSP00000413095   ⟸   ENST00000457932
RefSeq Acc Id: ENSP00000407716   ⟸   ENST00000419652
RefSeq Acc Id: ENSP00000391005   ⟸   ENST00000444396
RefSeq Acc Id: ENSP00000385073   ⟸   ENST00000405576
RefSeq Acc Id: ENSP00000384745   ⟸   ENST00000405853
RefSeq Acc Id: ENSP00000477707   ⟸   ENST00000616973
RefSeq Acc Id: ENSP00000385801   ⟸   ENST00000407404
RefSeq Acc Id: ENSP00000406692   ⟸   ENST00000420369
RefSeq Acc Id: ENSP00000415591   ⟸   ENST00000449369
RefSeq Acc Id: ENSP00000432073   ⟸   ENST00000527949
RefSeq Acc Id: ENSP00000378793   ⟸   ENST00000395397
RefSeq Acc Id: ENSP00000403696   ⟸   ENST00000436029
RefSeq Acc Id: ENSP00000403798   ⟸   ENST00000436778
RefSeq Acc Id: ENSP00000396132   ⟸   ENST00000437276
Protein Domains
NR LBD   Nuclear receptor

Promoters
RGD ID:6788744
Promoter ID:HG_KWN:12785
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   K562,   NB4
Transcripts:ENST00000298843,   NM_001130101,   NM_005693,   OTTHUMT00000319217,   OTTHUMT00000319222,   OTTHUMT00000319223,   OTTHUMT00000319224,   OTTHUMT00000319225,   OTTHUMT00000319226,   OTTHUMT00000319227,   OTTHUMT00000319228,   OTTHUMT00000319229,   OTTHUMT00000319230,   OTTHUMT00000319231,   OTTHUMT00000319232,   OTTHUMT00000319233,   OTTHUMT00000319234,   OTTHUMT00000319235,   UC001NEP.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361147,235,694 - 47,236,194 (+)MPROMDB
RGD ID:7220231
Promoter ID:EPDNEW_H15861
Type:initiation region
Name:NR1H3_1
Description:nuclear receptor subfamily 1 group H member 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H15862  EPDNEW_H15863  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,248,938 - 47,248,998EPDNEW
RGD ID:7220233
Promoter ID:EPDNEW_H15862
Type:initiation region
Name:NR1H3_3
Description:nuclear receptor subfamily 1 group H member 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H15861  EPDNEW_H15863  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,707 - 47,257,767EPDNEW
RGD ID:7220237
Promoter ID:EPDNEW_H15863
Type:initiation region
Name:NR1H3_2
Description:nuclear receptor subfamily 1 group H member 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H15861  EPDNEW_H15862  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381147,257,978 - 47,258,038EPDNEW

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 11p11.2(chr11:46840454-48643003)x1 copy number loss See cases [RCV000051014] Chr11:46840454..48643003 [GRCh38]
Chr11:46862005..48664555 [GRCh37]
Chr11:46818581..48621131 [NCBI36]
Chr11:11p11.2
pathogenic
GRCh38/hg38 11p12-11.2(chr11:36508280-48643003)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052680]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052680]|See cases [RCV000052680] Chr11:36508280..48643003 [GRCh38]
Chr11:36529830..48664555 [GRCh37]
Chr11:36486406..48621131 [NCBI36]
Chr11:11p12-11.2
pathogenic
NM_001251935.1(NR1H3):c.1235G>A (p.Arg412Gln) single nucleotide variant Malignant melanoma [RCV000069379] Chr11:47268569 [GRCh38]
Chr11:47290120 [GRCh37]
Chr11:47246696 [NCBI36]
Chr11:11p11.2
not provided
NM_001610.3(ACP2):c.246C>T (p.Ala82=) single nucleotide variant Malignant melanoma [RCV000069378] Chr11:47247692 [GRCh38]
Chr11:47269243 [GRCh37]
Chr11:47225819 [NCBI36]
Chr11:11p11.2
not provided
GRCh38/hg38 11p12-11.2(chr11:41118322-48643003)x1 copy number loss See cases [RCV000135405] Chr11:41118322..48643003 [GRCh38]
Chr11:41139872..48664555 [GRCh37]
Chr11:41096448..48621131 [NCBI36]
Chr11:11p12-11.2
pathogenic
GRCh38/hg38 11p12-11.12(chr11:39179252-49135735)x1 copy number loss See cases [RCV000137391] Chr11:39179252..49135735 [GRCh38]
Chr11:39200802..49157287 [GRCh37]
Chr11:39157378..49113863 [NCBI36]
Chr11:11p12-11.12
pathogenic
GRCh38/hg38 11p12-11.12(chr11:42727555-49135735)x3 copy number gain See cases [RCV000139422] Chr11:42727555..49135735 [GRCh38]
Chr11:42749105..49157287 [GRCh37]
Chr11:42705681..49113863 [NCBI36]
Chr11:11p12-11.12
likely pathogenic
GRCh38/hg38 11p11.2(chr11:47210659-47427331)x1 copy number loss See cases [RCV000139788] Chr11:47210659..47427331 [GRCh38]
Chr11:47232210..47448882 [GRCh37]
Chr11:47188786..47405458 [NCBI36]
Chr11:11p11.2
pathogenic|likely benign
NM_005693.4(NR1H3):c.1244G>A (p.Arg415Gln) single nucleotide variant Multiple sclerosis [RCV000211445] Chr11:47268596 [GRCh38]
Chr11:47290147 [GRCh37]
Chr11:11p11.2
pathogenic
NC_000011.9:g.(?_46880514)_(47470726_?)del deletion Hypertrophic cardiomyopathy [RCV000629174] Chr11:46880514..47470726 [GRCh37]
Chr11:11p11.2
pathogenic
GRCh37/hg19 11p12-11.2(chr11:42475897-48372559)x1 copy number loss See cases [RCV000446383] Chr11:42475897..48372559 [GRCh37]
Chr11:11p12-11.2
pathogenic
GRCh37/hg19 11p14.2-11.12(chr11:26574629-50508019)x3 copy number gain See cases [RCV000448603] Chr11:26574629..50508019 [GRCh37]
Chr11:11p14.2-11.12
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470) copy number gain See cases [RCV000511729] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470)x3 copy number gain See cases [RCV000510881] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
NM_001610.4(ACP2):c.86G>A (p.Arg29Gln) single nucleotide variant not provided [RCV000675645] Chr11:47248704 [GRCh38]
Chr11:47270255 [GRCh37]
Chr11:11p11.2
benign
GRCh37/hg19 11p15.5-q25(chr11:198510-134934063)x3 copy number gain not provided [RCV000737348] Chr11:198510..134934063 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:70864-134938470)x3 copy number gain not provided [RCV000749874] Chr11:70864..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
NM_005693.4(NR1H3):c.393C>T (p.His131=) single nucleotide variant not provided [RCV000897098] Chr11:47260569 [GRCh38]
Chr11:47282120 [GRCh37]
Chr11:11p11.2
likely benign
NM_001610.4(ACP2):c.28C>T (p.Arg10Trp) single nucleotide variant not provided [RCV000968476] Chr11:47248762 [GRCh38]
Chr11:47270313 [GRCh37]
Chr11:11p11.2
likely benign
NM_005693.4(NR1H3):c.155G>T (p.Gly52Val) single nucleotide variant not provided [RCV000959975] Chr11:47259902 [GRCh38]
Chr11:47281453 [GRCh37]
Chr11:11p11.2
benign
NM_005693.4(NR1H3):c.333T>C (p.Asn111=) single nucleotide variant not provided [RCV000894363] Chr11:47260509 [GRCh38]
Chr11:47282060 [GRCh37]
Chr11:11p11.2
likely benign

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:7966 AgrOrtholog
COSMIC NR1H3 COSMIC
Ensembl Genes ENSG00000025434 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000378793 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000384745 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000385073 ENTREZGENE, UniProtKB/TrEMBL
  ENSP00000385801 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000387946 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000391005 UniProtKB/TrEMBL
  ENSP00000396132 UniProtKB/TrEMBL
  ENSP00000403696 UniProtKB/TrEMBL
  ENSP00000403798 UniProtKB/TrEMBL
  ENSP00000406692 UniProtKB/TrEMBL
  ENSP00000407716 UniProtKB/TrEMBL
  ENSP00000412636 UniProtKB/TrEMBL
  ENSP00000413095 UniProtKB/TrEMBL
  ENSP00000415591 UniProtKB/TrEMBL
  ENSP00000420656 UniProtKB/Swiss-Prot
  ENSP00000432073 UniProtKB/TrEMBL
  ENSP00000433271 ENTREZGENE, UniProtKB/TrEMBL
  ENSP00000434650 UniProtKB/TrEMBL
  ENSP00000477707 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENST00000395397 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000405576 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000405853 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000407404 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000412937 UniProtKB/TrEMBL
  ENST00000419652 UniProtKB/TrEMBL
  ENST00000420369 UniProtKB/TrEMBL
  ENST00000436029 UniProtKB/TrEMBL
  ENST00000436778 UniProtKB/TrEMBL
  ENST00000437276 UniProtKB/TrEMBL
  ENST00000441012 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000444396 UniProtKB/TrEMBL
  ENST00000449369 UniProtKB/TrEMBL
  ENST00000457932 UniProtKB/TrEMBL
  ENST00000467728 UniProtKB/Swiss-Prot
  ENST00000481889 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000527949 UniProtKB/TrEMBL
  ENST00000529540 ENTREZGENE
  ENST00000531660 UniProtKB/TrEMBL
  ENST00000616973 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 1.10.565.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.50.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000025434 GTEx
HGNC ID HGNC:7966 ENTREZGENE
Human Proteome Map NR1H3 Human Proteome Map
InterPro Liver_X_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NHR-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_NHR/GATA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:10062 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 10062 ENTREZGENE
OMIM 602423 OMIM
Pfam Hormone_recep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA31751 PharmGKB
PRINTS LIVERXRECPTR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STRDHORMONER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STROIDFINGER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HOLI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48508 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B4DXU5 ENTREZGENE, UniProtKB/TrEMBL
  B5MBY7 ENTREZGENE, UniProtKB/TrEMBL
  B6ZGS8_HUMAN UniProtKB/TrEMBL
  C9J2C8_HUMAN UniProtKB/TrEMBL
  C9J4R0_HUMAN UniProtKB/TrEMBL
  C9JBS2_HUMAN UniProtKB/TrEMBL
  C9JCS0_HUMAN UniProtKB/TrEMBL
  C9JEC2_HUMAN UniProtKB/TrEMBL
  C9JJ16_HUMAN UniProtKB/TrEMBL
  C9JTS4_HUMAN UniProtKB/TrEMBL
  E9PID2_HUMAN UniProtKB/TrEMBL
  E9PLL4_HUMAN UniProtKB/TrEMBL
  E9PPA1_HUMAN UniProtKB/TrEMBL
  F1D8N1 ENTREZGENE, UniProtKB/TrEMBL
  F8WC63_HUMAN UniProtKB/TrEMBL
  F8WEY6_HUMAN UniProtKB/TrEMBL
  NR1H3_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary A8K3J9 UniProtKB/Swiss-Prot
  D3DQR1 UniProtKB/Swiss-Prot
  Q8IW13 UniProtKB/Swiss-Prot
  Q96H87 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-24 NR1H3  nuclear receptor subfamily 1 group H member 3    nuclear receptor subfamily 1, group H, member 3  Symbol and/or name change 5135510 APPROVED