STAT5B (signal transducer and activator of transcription 5B) - Rat Genome Database

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Gene: STAT5B (signal transducer and activator of transcription 5B) Homo sapiens
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Symbol: STAT5B
Name: signal transducer and activator of transcription 5B
RGD ID: 730906
HGNC Page HGNC:11367
Description: Enables DNA-binding transcription activator activity, RNA polymerase II-specific; nuclear glucocorticoid receptor binding activity; and protein homodimerization activity. Involved in cell surface receptor signaling pathway; positive regulation of erythrocyte differentiation; and response to estradiol. Located in cytoplasm and nucleus. Implicated in colon adenocarcinoma; colorectal adenocarcinoma; growth hormone insensitivity syndrome with immune dysregulation 1; and growth hormone insensitivity syndrome with immune dysregulation 2. Biomarker of colorectal adenocarcinoma; gastric adenocarcinoma; hepatocellular carcinoma; and lung non-small cell carcinoma.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: GHISID2; STAT5; transcription factor STAT5B
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381742,199,177 - 42,288,370 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1742,199,176 - 42,288,633 (-)EnsemblGRCh38hg38GRCh38
GRCh371740,351,195 - 40,428,409 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361737,604,721 - 37,681,950 (-)NCBINCBI36Build 36hg18NCBI36
Build 341737,604,721 - 37,681,950NCBI
Celera1737,005,458 - 37,083,308 (-)NCBICelera
Cytogenetic Map17q21.2NCBI
HuRef1736,116,230 - 36,193,344 (-)NCBIHuRef
CHM1_11740,586,923 - 40,664,134 (-)NCBICHM1_1
T2T-CHM13v2.01743,055,661 - 43,144,521 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
STAT5BHumanAcute-Phase Reaction  ISOStat5b (Rattus norvegicus)2291935protein:decreased activity:liverRGD 
STAT5BHumancolon adenocarcinoma  IAGP 153323313DNA:SNPs:introns: (rs6503691 and rs7218653) (human)RGD 
STAT5BHumancolorectal adenocarcinoma disease_progressionIEP 153298931protein:increased expression:colorectum (human)RGD 
STAT5BHumancolorectal adenocarcinoma amelioratesIMP 11076784human cells in a mouse modelRGD 
STAT5BHumanEndotoxemia  ISOStat5b (Rattus norvegicus)1601383protein:decreased tyrosine phosphorylation:liverRGD 
STAT5BHumanExperimental Diabetes Mellitus  ISOStat5b (Rattus norvegicus)2291940 RGD 
STAT5BHumangastric adenocarcinoma exacerbatesIEP 153298934mRNA:increased expression:stomach (human)RGD 
STAT5BHumanhepatocellular carcinoma exacerbatesIEP 153298929protein:increased expression:liver (human)RGD 
STAT5BHumanhepatocellular carcinoma amelioratesIEP 153298932mRNA:increased expression:liver (human)RGD 
STAT5BHumanHypoxia  ISOStat5b (Rattus norvegicus)1601380mRNA:increased expression:perifornical nucleusRGD 
STAT5BHumanLiver Neoplasms exacerbatesISOStat5b (Mus musculus)153298928B6 strainRGD 
STAT5BHumanlung non-small cell carcinoma disease_progressionIEP 153298930mRNA and protein:increased expression:lung (human)RGD 
STAT5BHumanProstatic Neoplasms  ISOStat5b (Mus musculus)2291933 RGD 
STAT5BHumanReperfusion Injury  ISOStat5b (Rattus norvegicus)2303397mRNA:increased expression:hippocampusRGD 
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Original Reference(s)
STAT5BHumangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
STAT5BHumangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868 and PMID:28492532
STAT5BHumangenetic disease  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:28492532
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Growth hormone insensitivity with immune dysregulation 1 and autosomal recessiveClinVarPMID:13679528 and PMID:16464942
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Growth hormone insensitivity with immune dysregulation 1 and autosomal recessiveClinVarPMID:15827093 and PMID:28492532
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Growth hormone insensitivity with immune dysregulation 1 and autosomal recessiveClinVarPMID:27600764 and PMID:28492532
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:25741868 and PMID:28492532
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens) more ...8554872ClinVar more ...ClinVarPMID:28492532
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Growth hormone insensitivity with immune dysregulation 1 and autosomal recessiveClinVarPMID:17576681 more ...
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Growth hormone insensitivity with immune dysregulation 1 and autosomal recessiveClinVarPMID:25741868
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Growth hormone insensitivity with immune dysregulation 1 and autosomal recessiveClinVarPMID:24033266 more ...
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Growth hormone insensitivity with immune dysregulation 1 and autosomal recessiveClinVar 
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens) more ...8554872ClinVar Annotator: match by term: Growth hormone insensitivity with immune dysregulation 1 and autosomal recessiveClinVarPMID:29844444
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Growth hormone insensitivity with immune dysregulation 1 and autosomal recessiveClinVarPMID:15827093 more ...
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Growth hormone insensitivity with immune dysregulation 1 and autosomal recessiveClinVarPMID:25741868 more ...
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Growth hormone insensitivity with immune dysregulation 1 and autosomal recessiveClinVarPMID:15827093 more ...
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP (Homo sapiens)8554872ClinVar Annotator: match by term: Growth hormone insensitivity with immune dysregulation 1 and autosomal recessiveClinVarPMID:15827093 more ...
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Original Reference(s)
STAT5BHumanEnteropathy-Associated T-Cell Lymphoma  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:29200404
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:17030597
STAT5BHumannasal type extranodal NK/T-cell lymphoma  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:29200404
STAT5BHumanprimary cutaneous T-cell non-Hodgkin lymphoma  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:26192916
STAT5BHumanSplenomegaly  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:29200404
STAT5BHumanT-cell acute lymphoblastic leukemia  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:29200404
STAT5BHumanT-cell large granular lymphocyte leukemia  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:26192916 and PMID:29200404
STAT5BHumanT-cell non-Hodgkin lymphoma  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:26192917
STAT5BHumanT-cell prolymphocytic leukemia  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:29200404
STAT5BHumanT-Lymphocytopenia  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:17030597
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Original Reference(s)
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 1  IAGP 7240710 OMIM 
STAT5BHumangrowth hormone insensitivity syndrome with immune dysregulation 2  IAGP 7240710 OMIM 

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Original Reference(s)
STAT5BHuman(+)-catechin increases expressionEXP 6480464Catechin results in increased expression of STAT5B mRNACTDPMID:15465739
STAT5BHuman(1->4)-beta-D-glucan multiple interactionsISOStat5b (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of STAT5B mRNACTDPMID:36331819
STAT5BHuman(S)-nicotine increases expressionEXP 6480464Nicotine results in increased expression of STAT5B mRNACTDPMID:18805435
STAT5BHuman1,2-dimethylhydrazine decreases expressionISOStat5b (Rattus norvegicus)64804641 and 2-Dimethylhydrazine results in decreased expression of STAT5B mRNACTDPMID:32387197
STAT5BHuman1,2-dimethylhydrazine multiple interactionsISOStat5b (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in increased expression of STAT5B mRNACTDPMID:22206623
STAT5BHuman1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile increases expressionISOStat5b (Rattus norvegicus)6480464Citalopram results in increased expression of STAT5B mRNACTDPMID:28467792
STAT5BHuman1-benzofuran increases activityISOStat5b (Mus musculus)6480464benzofuran results in increased activity of STAT5B proteinCTDPMID:30114225
STAT5BHuman1-chloro-2,4-dinitrobenzene increases expressionEXP 6480464Dinitrochlorobenzene results in increased expression of STAT5B mRNACTDPMID:17374397
STAT5BHuman1-tert-Butoxy-2-propanol affects activityISOStat5b (Mus musculus)6480464propylene glycol mono-t-butyl ether affects the activity of STAT5B proteinCTDPMID:30114225
STAT5BHuman17alpha-ethynylestradiol decreases activityISOStat5b (Mus musculus)6480464Ethinyl Estradiol results in decreased activity of STAT5B proteinCTDPMID:30114225
STAT5BHuman17beta-estradiol decreases activityISOStat5b (Mus musculus)6480464Estradiol results in decreased activity of STAT5B proteinCTDPMID:30114225
STAT5BHuman17beta-estradiol increases expressionISOStat5b (Mus musculus)6480464Estradiol results in increased expression of STAT5B mRNACTDPMID:39298647
STAT5BHuman17beta-estradiol 3-benzoate increases methylationISOStat5b (Rattus norvegicus)6480464estradiol 3-benzoate results in increased methylation of STAT5B promoterCTDPMID:27415467
STAT5BHuman17beta-hydroxy-5alpha-androstan-3-one increases activityISOStat5b (Mus musculus)6480464Dihydrotestosterone results in increased activity of STAT5B proteinCTDPMID:30114225
STAT5BHuman2,2',4,4'-Tetrabromodiphenyl ether decreases expressionEXP 64804642 more ...CTDPMID:31675489
STAT5BHuman2,3,7,8-tetrachlorodibenzodioxine increases expressionISOStat5b (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of STAT5B mRNACTDPMID:24058054
STAT5BHuman2,3,7,8-tetrachlorodibenzodioxine decreases activityISOStat5b (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased activity of STAT5B proteinCTDPMID:30114225
STAT5BHuman2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOStat5b (Mus musculus)6480464[TIPARP gene mutant form results in increased susceptibility to Tetrachlorodibenzodioxin] which results in increased expression of STAT5B mRNACTDPMID:25975270
STAT5BHuman2,3,7,8-tetrachlorodibenzodioxine affects expressionISOStat5b (Rattus norvegicus)6480464Tetrachlorodibenzodioxin affects the expression of STAT5B mRNACTDPMID:22298810
STAT5BHuman2,3,7,8-tetrachlorodibenzodioxine increases expressionISOStat5b (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in increased expression of STAT5B mRNACTDPMID:11752688 and PMID:21215274

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Biological Process
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Original Reference(s)
STAT5BHumanactivated T cell proliferation acts_upstream_ofIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
STAT5BHumanacute-phase response  ISOStat5b (Rattus norvegicus)9068941 RGDPMID:17565389 and REF_RGD_ID:2291935
STAT5BHumanB cell differentiation acts_upstream_ofIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
STAT5BHumancell population proliferation acts_upstream_ofIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
STAT5BHumancell surface receptor signaling pathway via JAK-STAT  ISOStat5b (Rattus norvegicus)9068941 RGDPMID:11064147 and REF_RGD_ID:1624963
STAT5BHumancell surface receptor signaling pathway via JAK-STAT acts_upstream_of_or_withinIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
STAT5BHumancell surface receptor signaling pathway via JAK-STAT involved_inIBAFB:FBgn0016917 more ...150520179 GO_CentralGO_REF:0000033
STAT5BHumancell surface receptor signaling pathway via JAK-STAT involved_inNAS 150520179 PMID:24058793ComplexPortalPMID:24058793
STAT5BHumancell surface receptor signaling pathway via JAK-STAT involved_inTAS 150520179 PMID:8631883PINCPMID:8631883
STAT5BHumancellular response to epidermal growth factor stimulus involved_inISSUniProtKB:P52632150520179 UniProtGO_REF:0000024
STAT5BHumancellular response to growth factor stimulus involved_inISSUniProtKB:P42232150520179 UniProtGO_REF:0000024
STAT5BHumancellular response to growth factor stimulus involved_inIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
STAT5BHumancellular response to hormone stimulus involved_inIDA 150520179 PMID:12552091BHF-UCLPMID:12552091
STAT5BHumancytokine-mediated signaling pathway involved_inIEAARBA:ARBA00028236150520179 UniProtGO_REF:0000117
STAT5BHumancytokine-mediated signaling pathway acts_upstream_of_or_withinIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
STAT5BHumancytokine-mediated signaling pathway involved_inIBAMGI:103034 more ...150520179 GO_CentralGO_REF:0000033
STAT5BHumandefense response involved_inIBAFB:FBgn0016917 more ...150520179 GO_CentralGO_REF:0000033
STAT5BHumandevelopment of secondary female sexual characteristics acts_upstream_of_or_withinIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
STAT5BHumandevelopment of secondary male sexual characteristics acts_upstream_of_or_withinIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
STAT5BHumanerythrocyte differentiation acts_upstream_ofIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
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Cellular Component
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Original Reference(s)
STAT5BHumanchromatin located_inISAtfclass:6.2.1150520179 NTNU_SBGO_REF:0000113
STAT5BHumancytoplasm is_active_inIBAFB:FBgn0016917 more ...150520179 GO_CentralGO_REF:0000033
STAT5BHumancytoplasm located_inIDA 150520179 PMID:29844444UniProtPMID:29844444
STAT5BHumancytoplasm located_inIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
STAT5BHumancytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
STAT5BHumancytoplasm located_inIEAUniRule:UR000046415150520179 UniProtGO_REF:0000104
STAT5BHumancytoplasm located_inIEAUniProtKB-KW:KW-0963150520179 UniProtGO_REF:0000043
STAT5BHumancytoplasm located_inISSUniProtKB:P42232150520179 UniProtGO_REF:0000024
STAT5BHumancytoplasm located_inIEAARBA:ARBA00026971150520179 UniProtGO_REF:0000117
STAT5BHumancytosol located_inIEAARBA:ARBA00029243150520179 UniProtGO_REF:0000117
STAT5BHumancytosol located_inTAS 150520179 ReactomeReactome:R-HSA-1168894 more ...
STAT5BHumannucleoplasm located_inTAS 150520179 ReactomeReactome:R-HSA-1470012 more ...
STAT5BHumannucleus located_inIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
STAT5BHumannucleus located_inIDA 150520179 PMID:29844444UniProtPMID:29844444
STAT5BHumannucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044
STAT5BHumannucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043
STAT5BHumannucleus located_inISSUniProtKB:P42232150520179 UniProtGO_REF:0000024
STAT5BHumannucleus located_inIEAUniRule:UR000046415150520179 UniProtGO_REF:0000104
STAT5BHumannucleus is_active_inIBAFB:FBgn0016917 more ...150520179 GO_CentralGO_REF:0000033
STAT5BHumanRNA polymerase II transcription regulator complex part_ofIBAPANTHER:PTN000210452 more ...150520179 GO_CentralGO_REF:0000033
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Molecular Function
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STAT5BHumanchromatin binding enablesISSUniProtKB:P52632150520179 UniProtGO_REF:0000024
STAT5BHumanDNA binding  ISOStat5b (Rattus norvegicus)9068941 RGDPMID:11562369 and REF_RGD_ID:70587
STAT5BHumanDNA binding enablesIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
STAT5BHumanDNA binding enablesIEAInterPro:IPR013801150520179 InterProGO_REF:0000002
STAT5BHumanDNA binding enablesIEAUniProtKB-KW:KW-0238150520179 UniProtGO_REF:0000043
STAT5BHumanDNA-binding transcription activator activity, RNA polymerase II-specific enablesIEAUniProtKB:P42232 and ensembl:ENSMUSP00000102981150520179 EnsemblGO_REF:0000107
STAT5BHumanDNA-binding transcription activator activity, RNA polymerase II-specific enablesIDA 150520179 PMID:29844444UniProtPMID:29844444
STAT5BHumanDNA-binding transcription factor activity  ISOStat5b (Rattus norvegicus)9068941 RGDPMID:11064147 more ...
STAT5BHumanDNA-binding transcription factor activity enablesIEAARBA:ARBA00028295150520179 UniProtGO_REF:0000117
STAT5BHumanDNA-binding transcription factor activity enablesIEAInterPro:IPR001217 more ...150520179 InterProGO_REF:0000002
STAT5BHumanDNA-binding transcription factor activity enablesTAS 150520179 PMID:8631883PINCPMID:8631883
STAT5BHumanDNA-binding transcription factor activity, RNA polymerase II-specific enablesISAtfclass:6.2.1150520179 NTNU_SBGO_REF:0000113
STAT5BHumanDNA-binding transcription factor activity, RNA polymerase II-specific enablesIBAFB:FBgn0016917 more ...150520179 GO_CentralGO_REF:0000033
STAT5BHumanDNA-binding transcription factor binding  ISOStat3 (Rattus norvegicus)9068941 RGDPMID:16527988 and REF_RGD_ID:1601384
STAT5BHumandouble-stranded DNA binding  ISOStat5b (Rattus norvegicus)9068941 RGDPMID:11064147 and REF_RGD_ID:1624963
STAT5BHumanidentical protein binding enablesIPIUniProtKB:P51692150520179 PMID:31175292IntActPMID:31175292
STAT5BHumannuclear glucocorticoid receptor binding enablesIPIUniProtKB:P04150150520179 PMID:12552091BHF-UCLPMID:12552091
STAT5BHumanprotein binding  ISOCrkl (Rattus norvegicus)9068941 RGDPMID:10720695 and REF_RGD_ID:7488900
STAT5BHumanprotein binding enablesIPIUniProtKB:Q96EY1150520179 PMID:21106534IntActPMID:21106534
STAT5BHumanprotein binding enablesIPIUniProtKB:Q02083 and UniProtKB:Q96EY1-1150520179 PMID:21106534UniProtPMID:21106534
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RGD Manual Annotations


  
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Original Reference(s)
STAT5BHumanJak-Stat signaling pathway   TAS 1625126 RGD 
STAT5BHumanJak-Stat signaling pathway   ISOStat5b (Rattus norvegicus)1624963 RGD 

Imported Annotations - KEGG (archival)

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Original Reference(s)
STAT5BHumanacute myeloid leukemia pathway  IEA 6907045 KEGGhsa:05221
STAT5BHumanchronic myeloid leukemia pathway  IEA 6907045 KEGGhsa:05220
STAT5BHumanepidermal growth factor/neuregulin signaling pathway   IEA 6907045 KEGGhsa:04012
STAT5BHumanJak-Stat signaling pathway   IEA 6907045 KEGGhsa:04630
STAT5BHumanmeasles pathway  IEA 6907045 KEGGhsa:05162

Imported Annotations - PID (archival)

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Original Reference(s)
STAT5BHumanAdenocarcinoma of the colon  IAGP 153323313DNA:SNPs:introns: (rs6503691 and rs7218653)RGD 
STAT5BHumanColon cancer  IAGP 153323313DNA:SNPs:introns: (rs6503691 and rs7218653) (human)RGD 
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Original Reference(s)
STAT5BHumanAbdominal pain  IAGP 8699517 HPOORPHA:520
STAT5BHumanAbnormal bleeding  IAGP 8699517 HPOORPHA:520
STAT5BHumanAbnormally high-pitched voice  IAGP 8699517 HPOMIM:245590
STAT5BHumanAddictive alcohol use  IAGP 8699517 HPOORPHA:520
STAT5BHumanAnemia  IAGP 8699517 HPOORPHA:520
STAT5BHumanAnorexia  IAGP 8699517 HPOORPHA:520
STAT5BHumanAutosomal dominant inheritance  IAGP 8699517 HPOMIM:618985
STAT5BHumanAutosomal recessive inheritance  IAGP 8699517 HPOMIM:245590
STAT5BHumanBone marrow hypercellularity  IAGP 8699517 HPOORPHA:520
STAT5BHumanBone pain  IAGP 8699517 HPOORPHA:520
STAT5BHumanBruising susceptibility  IAGP 8699517 HPOORPHA:520
STAT5BHumanCeliac disease  IAGP 8699517 HPOMIM:618985
STAT5BHumanChronic infection  IAGP 8699517 HPOORPHA:520
STAT5BHumanConcave nasal ridge  IAGP 8699517 HPOMIM:245590
STAT5BHumanDecreased response to growth hormone stimulation test  IAGP 8699517 HPOMIM:245590
STAT5BHumanDecreased serum insulin-like growth factor 1  IAGP 8699517 HPOMIM:618985
STAT5BHumanDelayed puberty  IAGP 8699517 HPOMIM:618985
STAT5BHumanDelayed skeletal maturation  IAGP 8699517 HPOMIM:618985
STAT5BHumanDiffuse alveolar hemorrhage  IAGP 8699517 HPOORPHA:520
STAT5BHumanDisseminated intravascular coagulation  IAGP 8699517 HPOORPHA:520
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Reference Title
Reference Citation
1. ENDOTOXIN ATTENUATES GROWTH HORMONE INDUCED HEPATIC INSULIN-LIKE GROWTH FACTOR-1 EXPRESSION BY INHIBITING JAK2/STAT5 SIGNAL TRANSDUCTION AND STAT5b DNA BINDING. Chen Y, etal., Am J Physiol Endocrinol Metab. 2007 Feb 27;.
2. STAT5 isoforms regulate colorectal cancer cell apoptosis via reduction of mitochondrial membrane potential and generation of reactive oxygen species. Du W, etal., J Cell Physiol. 2012 Jun;227(6):2421-9. doi: 10.1002/jcp.22977.
3. Activation of the Jak/Stat signal transduction pathway in GH-treated rat osteoblast-like cells in culture. Gerland K, etal., Mol Cell Endocrinol. 2000 Oct 25;168(1-2):1-9.
4. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
5. Identification of immune checkpoint inhibitors and biomarkers among STAT family in stomach adenocarcinoma. Guo L, etal., Am J Transl Res. 2020 Sep 15;12(9):4977-4997. eCollection 2020.
6. Unphosphorylated STAT5A stabilizes heterochromatin and suppresses tumor growth. Hu X, etal., Proc Natl Acad Sci U S A. 2013 Jun 18;110(25):10213-8. doi: 10.1073/pnas.1221243110. Epub 2013 Jun 3.
7. STAT5 activity in pancreatic beta-cells influences the severity of diabetes in animal models of type 1 and 2 diabetes. Jackerott M, etal., Diabetes. 2006 Oct;55(10):2705-12.
8. Activation of signal transducer and activator of transcription 5 is required for progression of autochthonous prostate cancer: evidence from the transgenic adenocarcinoma of the mouse prostate system. Kazansky AV, etal., Cancer Res. 2003 Dec 15;63(24):8757-62.
9. Signal transducers and activators of transcription 5b activation enhances hepatocellular carcinoma aggressiveness through induction of epithelial-mesenchymal transition. Lee TK, etal., Cancer Res. 2006 Oct 15;66(20):9948-56. doi: 10.1158/0008-5472.CAN-06-1092.
10. Nuclear localization and binding affinity of STAT5b for the alpha(2)-macroglobulin gene promoter during rat liver development and the acute-phase response. Mihailovic M, etal., Acta Biochim Pol. 2007;54(2):331-40. Epub 2007 Jun 12.
11. The JAK-STAT signaling pathway: input and output integration. Murray PJ J Immunol. 2007 Mar 1;178(5):2623-9.
12. Genetic background determines if Stat5b suppresses or enhances murine hepatocarcinogenesis. Oberley CC, etal., Mol Carcinog. 2015 Oct;54(10):959-70. doi: 10.1002/mc.22165. Epub 2014 May 17.
13. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
14. Expression of STAT5, COX-2 and PIAS3 in correlation with NSCLC histhopathological features. Pastuszak-Lewandoska D, etal., PLoS One. 2014 Aug 19;9(8):e104265. doi: 10.1371/journal.pone.0104265. eCollection 2014.
15. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
16. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
17. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
18. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
19. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
20. JAK/STAT/SOCS-signaling pathway and colon and rectal cancer. Slattery ML, etal., Mol Carcinog. 2013 Feb;52(2):155-66. doi: 10.1002/mc.21841. Epub 2011 Nov 28.
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1 to 10 of 28 rows
PMID:7719938   PMID:8631883   PMID:8702476   PMID:8732682   PMID:8878484   PMID:8923468   PMID:8977232   PMID:9047382   PMID:9122188   PMID:9211920   PMID:9398404   PMID:9428692  
PMID:9484840   PMID:9528750   PMID:9575217   PMID:9657743   PMID:9804779   PMID:9813029   PMID:9845531   PMID:9880255   PMID:9989503   PMID:10358045   PMID:10441338   PMID:10506573  
PMID:10558875   PMID:10594041   PMID:10602027   PMID:10617656   PMID:10652277   PMID:10720694   PMID:10815800   PMID:10830280   PMID:10954736   PMID:10996427   PMID:11030348   PMID:11097834  
PMID:11158330   PMID:11350939   PMID:11440634   PMID:11485409   PMID:11562369   PMID:11726519   PMID:11751923   PMID:11867689   PMID:11923474   PMID:11929748   PMID:11929749   PMID:12036885  
PMID:12039028   PMID:12039059   PMID:12089361   PMID:12145702   PMID:12167251   PMID:12193575   PMID:12198240   PMID:12237455   PMID:12377952   PMID:12429742   PMID:12456798   PMID:12477932  
PMID:12538627   PMID:12552091   PMID:12605694   PMID:12621061   PMID:12642867   PMID:12847485   PMID:12901872   PMID:12954634   PMID:13679528   PMID:14583472   PMID:14645506   PMID:14662325  
PMID:14704793   PMID:14726409   PMID:14726487   PMID:14744259   PMID:15010467   PMID:15067053   PMID:15105428   PMID:15128421   PMID:15489334   PMID:15588985   PMID:15591245   PMID:15611091  
PMID:15644415   PMID:15677474   PMID:15944278   PMID:16025120   PMID:16115927   PMID:16155412   PMID:16169484   PMID:16289657   PMID:16303763   PMID:16464942   PMID:16476059   PMID:16502315  
PMID:16584384   PMID:16729043   PMID:16765629   PMID:16772534   PMID:16840779   PMID:16887981   PMID:16920911   PMID:16964243   PMID:17148664   PMID:17225522   PMID:17332243   PMID:17389811  
PMID:17438530   PMID:17471233   PMID:17509524   PMID:17546465   PMID:17554063   PMID:17630355   PMID:17639043   PMID:17652536   PMID:17672932   PMID:17726024   PMID:17822672   PMID:17881646  
1 to 10 of 28 rows



STAT5B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381742,199,177 - 42,288,370 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1742,199,176 - 42,288,633 (-)EnsemblGRCh38hg38GRCh38
GRCh371740,351,195 - 40,428,409 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361737,604,721 - 37,681,950 (-)NCBINCBI36Build 36hg18NCBI36
Build 341737,604,721 - 37,681,950NCBI
Celera1737,005,458 - 37,083,308 (-)NCBICelera
Cytogenetic Map17q21.2NCBI
HuRef1736,116,230 - 36,193,344 (-)NCBIHuRef
CHM1_11740,586,923 - 40,664,134 (-)NCBICHM1_1
T2T-CHM13v2.01743,055,661 - 43,144,521 (-)NCBIT2T-CHM13v2.0
Stat5b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911100,671,557 - 100,741,407 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11100,671,557 - 100,741,550 (-)EnsemblGRCm39 Ensembl
GRCm3811100,780,731 - 100,859,004 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11100,780,731 - 100,850,724 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711100,642,045 - 100,711,899 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611100,596,821 - 100,638,618 (-)NCBIMGSCv36mm8
MGSCv3611101,557,264 - 101,599,060 (-)NCBIMGSCv36mm8
Cytogenetic Map11DNCBI
cM Map1163.63NCBI
Stat5b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81086,205,148 - 86,276,178 (-)NCBIGRCr8
mRatBN7.21085,704,841 - 85,775,856 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1085,705,670 - 85,775,668 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1090,743,399 - 90,812,008 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01090,222,166 - 90,290,624 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01085,615,217 - 85,683,927 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01088,686,207 - 88,712,313 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1088,686,207 - 88,754,829 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01088,480,377 - 88,506,888 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41089,716,624 - 89,743,134 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11089,730,993 - 89,757,504 (-)NCBI
Celera1084,424,576 - 84,451,052 (-)NCBICelera
RH 3.4 Map10837.39RGD
Cytogenetic Map10q31NCBI
Stat5b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545116,255,398 - 16,272,214 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545116,253,645 - 16,295,337 (-)NCBIChiLan1.0ChiLan1.0
LOC100989105
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21922,696,139 - 22,784,759 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11724,586,321 - 24,674,917 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01715,040,303 - 15,116,682 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11715,306,412 - 15,338,973 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1715,306,418 - 15,336,463 (+)Ensemblpanpan1.1panPan2
STAT5B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1920,647,712 - 20,718,453 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl920,691,483 - 20,716,485 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha920,109,403 - 20,179,537 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0921,367,403 - 21,437,279 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl921,367,403 - 21,437,269 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1920,152,431 - 20,222,600 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0920,419,706 - 20,489,689 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0920,522,505 - 20,592,735 (+)NCBIUU_Cfam_GSD_1.0
LOC101954516
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560220,031,387 - 20,054,040 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649017,021,051 - 17,043,941 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649017,022,268 - 17,043,751 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STAT5B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1220,508,404 - 20,574,266 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11220,498,103 - 20,574,365 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21220,634,155 - 20,864,515 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103243413
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11663,997,486 - 64,070,392 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1663,997,441 - 64,070,445 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607734,795,632 - 34,884,310 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

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Variants in STAT5B
471 total Variants

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
MIR23Bhsa-miR-23b-3pTarbaseexternal_infoSequencingPOSITIVE

Predicted Target Of
Summary Value
Count of predictions:2261
Count of miRNA genes:1088
Interacting mature miRNAs:1356
Transcripts:ENST00000293328, ENST00000415845, ENST00000468312, ENST00000468496, ENST00000481253, ENST00000481517, ENST00000498674
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 36 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
407110724GWAS759700_Hwaist-hip ratio QTL GWAS759700 (human)4e-14waist-hip ratiowaist to hip ratio (WHR) (CMO:0000020)174226206142262062Human
597594970GWAS1651830_Heosinophil count QTL GWAS1651830 (human)1e-12eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)174228524842285249Human
597024914GWAS1120988_Hallergic disease QTL GWAS1120988 (human)1e-09allergic disease174226284442262845Human
407113615GWAS762591_Heosinophil count QTL GWAS762591 (human)4e-08eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)174223641242236413Human
597325270GWAS1421344_HCrohn's disease QTL GWAS1421344 (human)0.000006intestine integrity trait (VT:0010554)174224207242242073Human
597083610GWAS1179684_Hlymphocyte count QTL GWAS1179684 (human)6e-09lymphocyte countblood lymphocyte count (CMO:0000031)174227428142274282Human
597306388GWAS1402462_Hpulse pressure measurement QTL GWAS1402462 (human)2e-15pulse pressure measurementpulse pressure (CMO:0000292)174223641242236413Human
597208023GWAS1304097_Hchildhood onset asthma QTL GWAS1304097 (human)5e-09childhood onset asthma174223861142238612Human
597596753GWAS1653613_Heosinophil count QTL GWAS1653613 (human)4e-13eosinophil quantity (VT:0002602)blood eosinophil count (CMO:0000033)174228524842285249Human
597099907GWAS1195981_Hneutrophil percentage of leukocytes QTL GWAS1195981 (human)5e-11neutrophil quantity (VT:0000222)blood neutrophil count to total leukocyte count ratio (CMO:0000370)174227428142274282Human

1 to 10 of 36 rows
D17S1802  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,353,486 - 40,353,713UniSTSGRCh37
Build 361737,607,012 - 37,607,239RGDNCBI36
Celera1737,007,749 - 37,007,976RGD
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map17q25.3UniSTS
HuRef1736,118,521 - 36,118,748UniSTS
Marshfield Genetic Map1764.16UniSTS
Marshfield Genetic Map1764.16RGD
Genethon Genetic Map1764.9UniSTS
deCODE Assembly Map1770.79UniSTS
D17S1793  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,359,404 - 40,359,602UniSTSGRCh37
Build 361737,612,930 - 37,613,128RGDNCBI36
Celera1737,013,667 - 37,013,865RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,124,440 - 36,124,636UniSTS
Marshfield Genetic Map1763.09RGD
Marshfield Genetic Map1763.09UniSTS
Genethon Genetic Map1763.7UniSTS
deCODE Assembly Map1770.79UniSTS
Whitehead-YAC Contig Map17 UniSTS
D17S1801  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,415,784 - 40,416,022UniSTSGRCh37
Build 361737,669,310 - 37,669,548RGDNCBI36
Celera1737,070,668 - 37,070,906RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,180,822 - 36,181,056UniSTS
Marshfield Genetic Map1763.09UniSTS
Marshfield Genetic Map1763.09RGD
Genethon Genetic Map1763.7UniSTS
deCODE Assembly Map1771.07UniSTS
RH16203  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,413,776 - 40,413,927UniSTSGRCh37
Build 361737,667,302 - 37,667,453RGDNCBI36
Celera1737,068,660 - 37,068,811RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,178,820 - 36,178,971UniSTS
GeneMap99-GB4 RH Map17307.37UniSTS
D17S1192  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,421,284 - 40,421,472UniSTSGRCh37
Build 361737,674,810 - 37,674,998RGDNCBI36
Celera242,854,346 - 42,855,778UniSTS
Celera1737,076,168 - 37,076,356RGD
Cytogenetic Map2p21UniSTS
Cytogenetic Map17q11.2UniSTS
HuRef1736,186,318 - 36,186,506UniSTS
HuRef242,749,655 - 42,751,087UniSTS
RH91495  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,352,576 - 40,352,746UniSTSGRCh37
Build 361737,606,102 - 37,606,272RGDNCBI36
Celera1737,006,839 - 37,007,009RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,117,611 - 36,117,781UniSTS
GeneMap99-GB4 RH Map17306.94UniSTS
D17S1139  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,359,426 - 40,359,578UniSTSGRCh37
Build 361737,612,952 - 37,613,104RGDNCBI36
Celera1737,013,689 - 37,013,841RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,124,462 - 36,124,612UniSTS
D17S1143  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,353,522 - 40,353,618UniSTSGRCh37
Build 361737,607,048 - 37,607,144RGDNCBI36
Celera1737,007,785 - 37,007,881RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,118,557 - 36,118,653UniSTS
D17S1240  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,407,446 - 40,407,651UniSTSGRCh37
Build 361737,660,972 - 37,661,177RGDNCBI36
Celera1737,062,330 - 37,062,535RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,172,490 - 36,172,695UniSTS
WI-11886  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,351,201 - 40,351,350UniSTSGRCh37
Build 361737,604,727 - 37,604,876RGDNCBI36
Celera1737,005,464 - 37,005,613RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,116,236 - 36,116,385UniSTS
GeneMap99-GB4 RH Map17303.67UniSTS
Whitehead-RH Map17350.1UniSTS
NCBI RH Map17352.4UniSTS
STS-U48730  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,353,524 - 40,353,751UniSTSGRCh37
Build 361737,607,050 - 37,607,277RGDNCBI36
Celera1737,007,787 - 37,008,014RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,118,559 - 36,118,786UniSTS
GeneMap99-GB4 RH Map17303.56UniSTS
NCBI RH Map17352.4UniSTS
STS-T90203  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,353,676 - 40,353,874UniSTSGRCh37
Build 361737,607,202 - 37,607,400RGDNCBI36
Celera1737,007,939 - 37,008,137RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,118,711 - 36,118,910UniSTS
GeneMap99-GB4 RH Map17306.52UniSTS
NCBI RH Map17436.9UniSTS
SHGC-64296  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,353,732 - 40,353,846UniSTSGRCh37
Build 361737,607,258 - 37,607,372RGDNCBI36
Celera1737,007,995 - 37,008,109RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,118,767 - 36,118,882UniSTS
TNG Radiation Hybrid Map1718905.0UniSTS
D17S1673  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,352,503 - 40,352,746UniSTSGRCh37
Build 361737,606,029 - 37,606,272RGDNCBI36
Celera1737,006,766 - 37,007,009RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,117,538 - 36,117,781UniSTS
Whitehead-YAC Contig Map17 UniSTS
RH36528  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371740,352,067 - 40,352,222UniSTSGRCh37
Build 361737,605,593 - 37,605,748RGDNCBI36
Celera1737,006,330 - 37,006,485RGD
Cytogenetic Map17q11.2UniSTS
HuRef1736,117,102 - 36,117,257UniSTS
GeneMap99-GB4 RH Map17309.42UniSTS
NCBI RH Map17474.9UniSTS
D1S1425  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map4q21.23UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map8q12.1UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map6q25.2-q25.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map2p23-p22UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic Map2p11.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map2p12-p11.2UniSTS
Cytogenetic Map3q11.1UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map1p21.3UniSTS
Cytogenetic Map1q32.2UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map18p11.3-p11.2UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map21p11.1UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map12p12.2-p11.2UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map17q22-q23.2UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map7q31.1-q31.3UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map3p21.1-p14.2UniSTS
Cytogenetic Map2p24UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map12q24.32UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map15q11-q12UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map15q21.1-q21.2UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map12p13.33UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map4q31.21UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map1q24.2UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map10p15-p14UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map3q12.1UniSTS
Cytogenetic Map15q24-q25UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map6pter-p12.1UniSTS
Cytogenetic Map6q16UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map11q23.1-q23.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map16q24.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic MapXq21.1UniSTS
RH45469  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17q11.2UniSTS
GeneMap99-GB4 RH Map17309.01UniSTS
NCBI RH Map17474.9UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
pharyngeal arch
renal system
reproductive system
respiratory system
sensory system
1204 2435 2788 2249 4961 1726 2349 5 623 1951 465 2268 7298 6466 53 3725 1 851 1741 1614 171


1 to 30 of 39 rows
RefSeq Transcripts NG_007271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_012448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005257626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017024977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024450898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047436593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054316998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054316999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054317002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB208920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC099811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412895 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ412899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ421991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK308163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL040162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 39 rows

Ensembl Acc Id: ENST00000293328   ⟹   ENSP00000293328
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,177 - 42,276,391 (-)Ensembl
Ensembl Acc Id: ENST00000415845   ⟹   ENSP00000398379
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,177 - 42,276,707 (-)Ensembl
Ensembl Acc Id: ENST00000468312
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,217,690 - 42,276,406 (-)Ensembl
Ensembl Acc Id: ENST00000468496
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,207,582 - 42,217,282 (-)Ensembl
Ensembl Acc Id: ENST00000481253
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,207,559 - 42,210,592 (-)Ensembl
Ensembl Acc Id: ENST00000481517
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,210,417 - 42,217,871 (-)Ensembl
Ensembl Acc Id: ENST00000498674
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,189 - 42,203,417 (-)Ensembl
Ensembl Acc Id: ENST00000698774
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,276,411 (-)Ensembl
Ensembl Acc Id: ENST00000698775   ⟹   ENSP00000513922
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,276,412 (-)Ensembl
Ensembl Acc Id: ENST00000698776   ⟹   ENSP00000513923
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,288,331 (-)Ensembl
Ensembl Acc Id: ENST00000698777   ⟹   ENSP00000513924
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,288,633 (-)Ensembl
Ensembl Acc Id: ENST00000698778   ⟹   ENSP00000513925
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,181 - 42,276,397 (-)Ensembl
Ensembl Acc Id: ENST00000698779   ⟹   ENSP00000513926
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,190 - 42,276,397 (-)Ensembl
Ensembl Acc Id: ENST00000698801
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,223,807 (-)Ensembl
Ensembl Acc Id: ENST00000698802   ⟹   ENSP00000513944
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,232,127 (-)Ensembl
Ensembl Acc Id: ENST00000698803   ⟹   ENSP00000513945
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,276,352 (-)Ensembl
Ensembl Acc Id: ENST00000698804
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,276,356 (-)Ensembl
Ensembl Acc Id: ENST00000698805
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,276,358 (-)Ensembl
Ensembl Acc Id: ENST00000698806   ⟹   ENSP00000513946
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,276,371 (-)Ensembl
Ensembl Acc Id: ENST00000698807
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,276,391 (-)Ensembl
Ensembl Acc Id: ENST00000698808   ⟹   ENSP00000513947
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,276,397 (-)Ensembl
Ensembl Acc Id: ENST00000698809   ⟹   ENSP00000513948
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,276,397 (-)Ensembl
Ensembl Acc Id: ENST00000698810   ⟹   ENSP00000513949
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,176 - 42,276,413 (-)Ensembl
Ensembl Acc Id: ENST00000698811
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,181 - 42,205,280 (-)Ensembl
Ensembl Acc Id: ENST00000698812   ⟹   ENSP00000513950
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,181 - 42,232,129 (-)Ensembl
Ensembl Acc Id: ENST00000698813   ⟹   ENSP00000513951
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,181 - 42,276,397 (-)Ensembl
Ensembl Acc Id: ENST00000698814   ⟹   ENSP00000513952
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,181 - 42,276,397 (-)Ensembl
Ensembl Acc Id: ENST00000698815   ⟹   ENSP00000513953
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,199,181 - 42,276,397 (-)Ensembl
Ensembl Acc Id: ENST00000698816
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,211,861 - 42,276,325 (-)Ensembl
Ensembl Acc Id: ENST00000698817
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1742,222,884 - 42,232,139 (-)Ensembl
RefSeq Acc Id: NM_012448   ⟹   NP_036580
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381742,199,177 - 42,276,391 (-)NCBI
GRCh371740,351,195 - 40,428,478 (-)NCBI
Build 361737,604,721 - 37,681,950 (-)NCBI Archive
HuRef1736,116,230 - 36,193,344 (-)ENTREZGENE
CHM1_11740,586,923 - 40,664,134 (-)NCBI
T2T-CHM13v2.01743,055,661 - 43,132,878 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005257626   ⟹   XP_005257683
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381742,214,532 - 42,276,391 (-)NCBI
GRCh371740,351,195 - 40,428,478 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017024977   ⟹   XP_016880466
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381742,199,177 - 42,276,391 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024450897   ⟹   XP_024306665
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381742,199,177 - 42,288,370 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024450898   ⟹   XP_024306666
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381742,199,177 - 42,275,633 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047436593   ⟹   XP_047292549
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381742,199,177 - 42,288,370 (-)NCBI
RefSeq Acc Id: XM_054316998   ⟹   XP_054172973
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01743,055,661 - 43,144,521 (-)NCBI
RefSeq Acc Id: XM_054316999   ⟹   XP_054172974
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01743,055,661 - 43,125,343 (-)NCBI
RefSeq Acc Id: XM_054317000   ⟹   XP_054172975
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01743,055,661 - 43,132,878 (-)NCBI
RefSeq Acc Id: XM_054317001   ⟹   XP_054172976
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01743,055,661 - 43,144,356 (-)NCBI
RefSeq Acc Id: XM_054317002   ⟹   XP_054172977
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01743,071,012 - 43,132,878 (-)NCBI
1 to 5 of 28 rows
1 to 5 of 28 rows
RefSeq Acc Id: NP_036580   ⟸   NM_012448
- UniProtKB: Q8WWS8 (UniProtKB/Swiss-Prot),   P51692 (UniProtKB/Swiss-Prot),   A0A8V8TP16 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005257683   ⟸   XM_005257626
- Peptide Label: isoform X3
- UniProtKB: A0A8V8TM91 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016880466   ⟸   XM_017024977
- Peptide Label: isoform X2
- UniProtKB: A0A8V8TP16 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024306665   ⟸   XM_024450897
- Peptide Label: isoform X1
- UniProtKB: P51692 (UniProtKB/Swiss-Prot),   Q8WWS8 (UniProtKB/Swiss-Prot),   A0A8V8TP16 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024306666   ⟸   XM_024450898
- Peptide Label: isoform X1
- UniProtKB: P51692 (UniProtKB/Swiss-Prot),   Q8WWS8 (UniProtKB/Swiss-Prot),   A0A8V8TP16 (UniProtKB/TrEMBL)
- Sequence:
Name Modeler Protein Id AA Range Protein Structure
AF-P51692-F1-model_v2 AlphaFold P51692 1-787 view protein structure

RGD ID:6794594
Promoter ID:HG_KWN:26182
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000319797,   OTTHUMT00000319798,   OTTHUMT00000319799
Position:
Human AssemblyChrPosition (strand)Source
Build 361737,681,926 - 37,682,642 (-)MPROMDB
RGD ID:7235067
Promoter ID:EPDNEW_H23279
Type:initiation region
Name:STAT5B_3
Description:signal transducer and activator of transcription 5B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H23280  EPDNEW_H23285  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381742,275,631 - 42,275,691EPDNEW
RGD ID:7235069
Promoter ID:EPDNEW_H23280
Type:initiation region
Name:STAT5B_1
Description:signal transducer and activator of transcription 5B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H23279  EPDNEW_H23285  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381742,276,375 - 42,276,435EPDNEW
RGD ID:7235081
Promoter ID:EPDNEW_H23285
Type:initiation region
Name:STAT5B_2
Description:signal transducer and activator of transcription 5B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H23279  EPDNEW_H23280  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381742,288,537 - 42,288,597EPDNEW


1 to 40 of 63 rows
Database
Acc Id
Source(s)
COSMIC STAT5B COSMIC
Ensembl Genes ENSG00000173757 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000293328 ENTREZGENE
  ENST00000293328.8 UniProtKB/Swiss-Prot
  ENST00000415845.2 UniProtKB/Swiss-Prot
  ENST00000698776 ENTREZGENE
  ENST00000698776.1 UniProtKB/Swiss-Prot
  ENST00000698777.1 UniProtKB/Swiss-Prot
  ENST00000698801 ENTREZGENE
  ENST00000698815 ENTREZGENE
Gene3D-CATH 1.10.532.10 UniProtKB/Swiss-Prot
  2.60.40.630 UniProtKB/Swiss-Prot
  3.30.505.10 UniProtKB/Swiss-Prot
  EF-hand UniProtKB/Swiss-Prot
  STAT transcription factor, all-alpha domain UniProtKB/Swiss-Prot
GTEx ENSG00000173757 GTEx
HGNC ID HGNC:11367 ENTREZGENE
Human Proteome Map STAT5B Human Proteome Map
InterPro p53-like_TF_DNA-bd UniProtKB/Swiss-Prot
  SH2 UniProtKB/Swiss-Prot
  SH2_dom_sf UniProtKB/Swiss-Prot
  STAT UniProtKB/Swiss-Prot
  STAT5_CCD UniProtKB/Swiss-Prot
  STAT5a/5b UniProtKB/Swiss-Prot
  STAT5b_SH2 UniProtKB/Swiss-Prot
  STAT_linker UniProtKB/Swiss-Prot
  STAT_N_sf UniProtKB/Swiss-Prot
  STAT_TF_alpha UniProtKB/Swiss-Prot
  STAT_TF_coiled-coil UniProtKB/Swiss-Prot
  STAT_TF_DNA-bd UniProtKB/Swiss-Prot
  STAT_TF_DNA-bd_N UniProtKB/Swiss-Prot
  STAT_TF_prot_interaction UniProtKB/Swiss-Prot
KEGG Report hsa:6777 UniProtKB/Swiss-Prot
NCBI Gene 6777 ENTREZGENE
OMIM 604260 OMIM
PANTHER PTHR11801 UniProtKB/Swiss-Prot
Pfam SH2 UniProtKB/Swiss-Prot
  STAT_alpha UniProtKB/Swiss-Prot
  STAT_bind UniProtKB/Swiss-Prot
  STAT_int UniProtKB/Swiss-Prot
1 to 40 of 63 rows