GWAS1427782_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1427782_H (able to hear with hearing aids QTL GWAS1427782 (human)) Homo sapiens

Symbol: GWAS1427782_H
Name: able to hear with hearing aids QTL GWAS1427782 (human)
RGD ID: 597331708
Trait: able to hear with hearing aids
LOD Score: Not Available
P Value: 3.0E-7
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381742,226,155 - 42,226,156RGD_MAPPER_PIPELINEGRCh38
GRCh371740,378,173 - 40,378,174RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1427782_HHumanable to hear with hearing aids  IAGPrs140415744405850206 GWAS_CATALOGPMID:34847940

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
730906STAT5Bsignal transducer and activator of transcription 5B174219917742288370Human


Peak: (rs140415744)
Human AssemblyChrPosition (strand)Source
GRCh381742,226,155 - 42,226,156RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597331708GWAS1427782_Hable to hear with hearing aids QTL GWAS1427782 (human)0.0000003able to hear with hearing aids174222615542226156Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1427782_H GCST90044774 Hearing aid use 11,081 European ancestry cases, 208,083 European ancestry controls ? NR 3E-7 6.523 rs140415744 N/A able to hear with hearing aids (EFO:0009720)
 PMID:34847940
Database
Acc Id
Source(s)
GWAS Catalog GCST90044774 GWAS Catalog

Note Type Note Reference