STAT5A (signal transducer and activator of transcription 5A) - Rat Genome Database

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Gene: STAT5A (signal transducer and activator of transcription 5A) Sus scrofa
Analyze
Symbol: STAT5A
Name: signal transducer and activator of transcription 5A
RGD ID: 14015331
Description: ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN activated T cell proliferation (ortholog); B cell differentiation (ortholog); cell population proliferation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1220,474,227 - 20,499,138 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11220,474,221 - 20,498,785 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21224,563,982 - 24,581,115 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
activated T cell proliferation  (ISO)
B cell differentiation  (ISO)
cell population proliferation  (ISO)
cell surface receptor signaling pathway via JAK-STAT  (IBA,IEA,ISO,ISS)
cellular response to cytokine stimulus  (ISO)
cellular response to granulocyte macrophage colony-stimulating factor stimulus  (ISO)
cellular response to organic cyclic compound  (ISO)
cytokine-mediated signaling pathway  (IBA,IEA,ISO,ISS)
defense response  (IBA,IEA)
development of secondary female sexual characteristics  (ISO,ISS)
development of secondary male sexual characteristics  (ISO)
eosinophil differentiation  (IEA)
epithelial cell differentiation involved in prostate gland development  (ISO)
erythrocyte differentiation  (ISO)
female pregnancy  (ISO,ISS)
gamma-delta T cell differentiation  (ISO)
growth hormone receptor signaling pathway via JAK-STAT  (IBA,IEA)
interleukin-15-mediated signaling pathway  (IEA)
interleukin-2-mediated signaling pathway  (IEA)
interleukin-3-mediated signaling pathway  (IEA)
interleukin-4-mediated signaling pathway  (IEA)
interleukin-5-mediated signaling pathway  (IEA)
interleukin-9-mediated signaling pathway  (IEA)
lactation  (IEA,ISO,ISS)
lipid storage  (ISO,ISS)
luteinization  (ISO,ISS)
lymphocyte differentiation  (ISO)
mammary gland development  (ISO,ISS)
mammary gland epithelium development  (ISO)
mammary gland involution  (ISO)
mast cell apoptotic process  (ISO)
mast cell differentiation  (ISO)
mast cell proliferation  (ISO)
mitotic cell cycle  (ISO)
multicellular organismal reproductive process  (ISO)
myeloid cell apoptotic process  (ISO)
natural killer cell differentiation  (ISO,ISS)
natural killer cell mediated cytotoxicity  (ISO)
negative regulation of apoptotic process  (ISS)
negative regulation of erythrocyte differentiation  (ISO,ISS)
negative regulation of mast cell apoptotic process  (ISO)
negative regulation of myeloid cell apoptotic process  (ISO)
Peyer's patch development  (ISO)
positive regulation of activated T cell proliferation  (ISO,ISS)
positive regulation of B cell differentiation  (ISO,ISS)
positive regulation of blood vessel endothelial cell migration  (IEA)
positive regulation of cell population proliferation  (ISO,ISS)
positive regulation of endothelial cell proliferation  (IEA)
positive regulation of gamma-delta T cell differentiation  (ISO)
positive regulation of inflammatory response  (ISO,ISS)
positive regulation of interleukin-2 production  (ISO,ISS)
positive regulation of lymphocyte differentiation  (ISO)
positive regulation of mast cell differentiation  (ISO)
positive regulation of mast cell proliferation  (ISO)
positive regulation of mitotic cell cycle  (ISO,ISS)
positive regulation of multicellular organism growth  (ISO,ISS)
positive regulation of natural killer cell differentiation  (ISO)
positive regulation of natural killer cell mediated cytotoxicity  (ISO)
positive regulation of T cell proliferation  (ISO)
positive regulation of transcription by RNA polymerase II  (ISO,ISS)
prostate gland epithelium morphogenesis  (ISO)
reelin-mediated signaling pathway  (IEA,ISO)
regulation of cell adhesion  (ISO,ISS)
regulation of cell population proliferation  (IBA,IEA)
regulation of DNA-templated transcription  (IEA)
regulation of epithelial cell differentiation  (ISO,ISS)
regulation of gene expression  (IEA)
regulation of multicellular organism growth  (ISO)
regulation of primary metabolic process  (IEA)
regulation of steroid metabolic process  (ISO,ISS)
regulation of transcription by RNA polymerase II  (IBA,IEA,ISO)
response to ethanol  (ISO)
response to nutrient levels  (ISO)
response to peptide hormone  (IBA,IEA,ISO)
signal transduction  (IEA)
T cell differentiation in thymus  (ISO)
T cell homeostasis  (ISO,ISS)
T cell proliferation  (ISO)
taurine metabolic process  (ISO)
transcription by RNA polymerase II  (ISO)

Cellular Component

References
Additional References at PubMed
PMID:14681463   PMID:16484801   PMID:17145712   PMID:30032202  


Genomics

Comparative Map Data
STAT5A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1220,474,227 - 20,499,138 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11220,474,221 - 20,498,785 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21224,563,982 - 24,581,115 (+)NCBISscrofa10.2Sscrofa10.2susScr3
STAT5A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381742,287,439 - 42,311,943 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1742,287,547 - 42,311,943 (+)EnsemblGRCh38hg38GRCh38
GRCh371740,439,565 - 40,463,961 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361737,693,091 - 37,717,484 (+)NCBINCBI36Build 36hg18NCBI36
Build 341737,693,090 - 37,717,484NCBI
Celera1737,094,449 - 37,118,845 (+)NCBICelera
Cytogenetic Map17q21.2NCBI
HuRef1736,204,247 - 36,228,642 (+)NCBIHuRef
CHM1_11740,675,279 - 40,699,663 (+)NCBICHM1_1
T2T-CHM13v2.01743,143,926 - 43,168,430 (+)NCBIT2T-CHM13v2.0
Stat5a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911100,750,177 - 100,775,995 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11100,750,177 - 100,775,995 (+)EnsemblGRCm39 Ensembl
GRCm3811100,859,351 - 100,885,169 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11100,859,351 - 100,885,169 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711100,720,665 - 100,746,483 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611100,675,494 - 100,701,259 (+)NCBIMGSCv36mm8
MGSCv3611101,635,936 - 101,661,700 (+)NCBIMGSCv36mm8
Cytogenetic Map11DNCBI
cM Map1163.77NCBI
Stat5a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81086,285,859 - 86,310,187 (+)NCBIGRCr8
mRatBN7.21085,785,537 - 85,809,869 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1085,785,537 - 85,809,866 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1090,821,886 - 90,846,156 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01090,300,534 - 90,324,854 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01085,693,771 - 85,718,012 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01088,764,732 - 88,789,060 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1088,764,732 - 88,789,057 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01088,558,936 - 88,583,264 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41089,795,404 - 89,819,732 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11089,809,773 - 89,834,099 (+)NCBI
Celera1084,503,376 - 84,527,708 (+)NCBICelera
Cytogenetic Map10q31NCBI
Stat5a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495545116,305,363 - 16,319,219 (+)NCBIChiLan1.0ChiLan1.0
LOC100988550
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21922,673,101 - 22,696,260 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11724,563,275 - 24,586,438 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01715,005,025 - 15,029,110 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11715,228,465 - 15,251,783 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1715,228,465 - 15,251,783 (-)Ensemblpanpan1.1panPan2
STAT5A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1920,616,041 - 20,638,523 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl920,617,151 - 20,638,103 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha920,077,547 - 20,099,955 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0921,335,685 - 21,357,957 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl921,288,139 - 21,357,497 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1920,120,814 - 20,142,574 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0920,387,762 - 20,409,305 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0920,490,411 - 20,512,845 (-)NCBIUU_Cfam_GSD_1.0
STAT5A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11663,959,265 - 63,986,627 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1663,960,515 - 63,985,026 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607734,770,565 - 34,795,956 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in STAT5A
657 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 1
Low 10 4 3 4 2 23 2 3 3
Below cutoff

Sequence


RefSeq Acc Id: ENSSSCT00000018947   ⟹   ENSSSCP00000018442
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1220,474,227 - 20,499,138 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000042218   ⟹   ENSSSCP00000046308
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1220,474,227 - 20,498,237 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000064828   ⟹   ENSSSCP00000057882
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1220,474,227 - 20,498,237 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000105143   ⟹   ENSSSCP00000078841
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1220,475,383 - 20,499,138 (-)Ensembl
RefSeq Acc Id: NM_214290   ⟹   NP_999455
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11220,475,384 - 20,498,785 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021066247   ⟹   XP_020921906
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11220,474,221 - 20,498,137 (-)NCBI
Sequence:
RefSeq Acc Id: XP_020921906   ⟸   XM_021066247
- Peptide Label: isoform X1
- UniProtKB: A0A0A0MY60 (UniProtKB/TrEMBL),   A0A8D1JES4 (UniProtKB/TrEMBL),   E0AD96 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_999455   ⟸   NM_214290
- UniProtKB: Q9TUZ1 (UniProtKB/Swiss-Prot),   A0A8D1JES4 (UniProtKB/TrEMBL),   A0A8D2BNV0 (UniProtKB/TrEMBL),   E0AD96 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000057882   ⟸   ENSSSCT00000064828
RefSeq Acc Id: ENSSSCP00000046308   ⟸   ENSSSCT00000042218
RefSeq Acc Id: ENSSSCP00000018442   ⟸   ENSSSCT00000018947
RefSeq Acc Id: ENSSSCP00000078841   ⟸   ENSSSCT00000105143

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000017402 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025022813 UniProtKB/TrEMBL
  ENSSSCG00030067782 UniProtKB/TrEMBL
  ENSSSCG00035044477 UniProtKB/TrEMBL
  ENSSSCG00040015679 UniProtKB/TrEMBL
  ENSSSCG00045038391 UniProtKB/TrEMBL
  ENSSSCG00050067419 UniProtKB/TrEMBL
  ENSSSCG00055028735 UniProtKB/TrEMBL
  ENSSSCG00060055914 UniProtKB/TrEMBL
  ENSSSCG00065005240 UniProtKB/TrEMBL
  ENSSSCG00070014136 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000018947 ENTREZGENE
  ENSSSCT00000018947.4 UniProtKB/TrEMBL
  ENSSSCT00000042218.3 UniProtKB/TrEMBL
  ENSSSCT00000064828.3 UniProtKB/TrEMBL
  ENSSSCT00000105143 ENTREZGENE
  ENSSSCT00000105143.1 UniProtKB/TrEMBL
  ENSSSCT00025030981.1 UniProtKB/TrEMBL
  ENSSSCT00025031007.1 UniProtKB/TrEMBL
  ENSSSCT00025031016.1 UniProtKB/TrEMBL
  ENSSSCT00030094836.1 UniProtKB/TrEMBL
  ENSSSCT00030094868.1 UniProtKB/TrEMBL
  ENSSSCT00030094885.1 UniProtKB/TrEMBL
  ENSSSCT00035059117.1 UniProtKB/TrEMBL
  ENSSSCT00035059124.1 UniProtKB/TrEMBL
  ENSSSCT00035059134.1 UniProtKB/TrEMBL
  ENSSSCT00040024676.1 UniProtKB/TrEMBL
  ENSSSCT00040024757.1 UniProtKB/TrEMBL
  ENSSSCT00040024863.1 UniProtKB/TrEMBL
  ENSSSCT00040025037.1 UniProtKB/TrEMBL
  ENSSSCT00040025059.1 UniProtKB/TrEMBL
  ENSSSCT00045066623.1 UniProtKB/TrEMBL
  ENSSSCT00045066671.1 UniProtKB/TrEMBL
  ENSSSCT00045066704.1 UniProtKB/TrEMBL
  ENSSSCT00050091964.1 UniProtKB/TrEMBL
  ENSSSCT00050091967.1 UniProtKB/TrEMBL
  ENSSSCT00050091981.1 UniProtKB/TrEMBL
  ENSSSCT00055057056.1 UniProtKB/TrEMBL
  ENSSSCT00055057135.1 UniProtKB/TrEMBL
  ENSSSCT00055057236.1 UniProtKB/TrEMBL
  ENSSSCT00055057343.1 UniProtKB/TrEMBL
  ENSSSCT00060076911.1 UniProtKB/TrEMBL
  ENSSSCT00060076925.1 UniProtKB/TrEMBL
  ENSSSCT00060076936.1 UniProtKB/TrEMBL
  ENSSSCT00060076956.1 UniProtKB/TrEMBL
  ENSSSCT00065007127.1 UniProtKB/TrEMBL
  ENSSSCT00065007129.1 UniProtKB/TrEMBL
  ENSSSCT00065007137.1 UniProtKB/TrEMBL
  ENSSSCT00070027689.1 UniProtKB/TrEMBL
  ENSSSCT00070027695.1 UniProtKB/TrEMBL
  ENSSSCT00070027717.1 UniProtKB/TrEMBL
  ENSSSCT00070027731.1 UniProtKB/TrEMBL
  ENSSSCT00070027762.1 UniProtKB/TrEMBL
  ENSSSCT00070027766.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.532.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.630 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.505.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF-hand UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT transcription factor, all-alpha domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro p53-like_TF_DNA-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH2_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT5_CCD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT5a/5b UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT_linker UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT_N_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT_TF_alpha UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT_TF_coiled-coil UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT_TF_DNA-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT_TF_DNA-bd_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT_TF_prot_interaction UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:397550 UniProtKB/Swiss-Prot
NCBI Gene STAT5A ENTREZGENE
PANTHER PTHR11801 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11801:SF47 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT_alpha UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT_bind UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT_int UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT_linker UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SH2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STAT_int UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47655 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48092 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49417 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF55550 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0A0MY60 ENTREZGENE, UniProtKB/TrEMBL
  A0A287AQI9_PIG UniProtKB/TrEMBL
  A0A287BMN9_PIG UniProtKB/TrEMBL
  A0A4X1TZZ7_PIG UniProtKB/TrEMBL
  A0A4X1U0A0_PIG UniProtKB/TrEMBL
  A0A4X1U5H9_PIG UniProtKB/TrEMBL
  A0A8D1JEK3_PIG UniProtKB/TrEMBL
  A0A8D1JES4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1JJ54_PIG UniProtKB/TrEMBL
  A0A8D1SDA8_PIG UniProtKB/TrEMBL
  A0A8D2BNV0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4FKM2_PIG UniProtKB/TrEMBL
  E0AD96 ENTREZGENE, UniProtKB/TrEMBL
  Q3I359_PIG UniProtKB/TrEMBL
  Q9TUZ1 ENTREZGENE, UniProtKB/Swiss-Prot
VGNC ID VGNC:99087 ENTREZGENE