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ONTOLOGY REPORT - ANNOTATIONS

Term:hepaticobiliary system development
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Accession:GO:0061008 term browser browse the term
Definition:The progression of the hepaticobiliary system over time, from its formation to the mature structure. The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins.
Synonyms:exact_synonym: hepatobiliary system development


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common bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO
IEA 		MGI:2149672 (PMID:19619492)
GO_REF:0000107 		RGD
Ensembl		 PMID:19619492 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO
IEA 		MGI:3721426 (PMID:17580084)
GO_REF:0000107 		RGD
Ensembl		 PMID:17580084 GO_REF:0000107 NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 acts_upstream_of_or_within ISO
IEA 		MGI:4410614 (PMID:19776033)
GO_REF:0000107 		RGD
Ensembl		 PMID:19776033 GO_REF:0000107 NCBI chr10:72,655,921...72,667,007
Ensembl chr10:72,655,921...72,666,655 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO
IEA 		(PMID:19913509)
GO_REF:0000107 		RGD
Ensembl		 PMID:19913509 GO_REF:0000107 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain 39 molecular ruler complex subunit involved_in ISO
IEA 		(PMID:22693285)
GO_REF:0000107 		RGD
Ensembl		 PMID:22693285 GO_REF:0000107 NCBI chr 2:118,593,881...118,631,584
Ensembl chr 2:116,665,261...116,703,350 		JBrowse link
G Ccdc40 coiled-coil domain 40 molecular ruler complex subunit involved_in ISO
IEA 		(PMID:22693285)
GO_REF:0000107 		RGD
Ensembl		 PMID:22693285 GO_REF:0000107 NCBI chr10:104,486,748...104,527,284
Ensembl chr10:104,486,748...104,527,243 		JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA 		(PMID:19944405)
GO_REF:0000107 		RGD
Ensembl		 PMID:19944405 GO_REF:0000107 NCBI chr19:47,624,534...47,652,314
Ensembl chr19:47,624,181...47,652,313 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO
IEA 		(PMID:20007846)
GO_REF:0000107 		RGD
Ensembl		 PMID:20007846 GO_REF:0000107 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) RGD PMID:21719175 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) RGD PMID:9354794 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
gallbladder development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO
IEA 		MGI:3721426 (PMID:17580084)
GO_REF:0000107 		RGD
Ensembl		 PMID:17580084 GO_REF:0000107 NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO
IEA 		(PMID:19242925)
GO_REF:0000107 		RGD
Ensembl		 PMID:19242925 GO_REF:0000107 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO
IEA 		MGI:2179440 (PMID:19913509)
GO_REF:0000107 		RGD
Ensembl		 PMID:19913509 GO_REF:0000107 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
hepatic duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO
IEA 		MGI:3721426 (PMID:17580084)
GO_REF:0000107 		RGD
Ensembl		 PMID:17580084 GO_REF:0000107 NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
hepatoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:13,074,141...13,103,551
Ensembl chr20:13,074,700...13,108,442 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO
IEA 		MGI:3721426 (PMID:17580084)
GO_REF:0000107 		RGD
Ensembl		 PMID:17580084 GO_REF:0000107 NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO
IEA 		MGI:1857856 (PMID:18635606)
GO_REF:0000107 		RGD
Ensembl		 PMID:18635606 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of ISO
IEA 		MGI:3769504 (PMID:18356246)
GO_REF:0000107 		RGD
Ensembl		 PMID:18356246 GO_REF:0000107 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 IEP RGD PMID:11668598 RGD:2306909 NCBI chr 1:227,287,713...227,306,739
Ensembl chr 1:217,861,175...217,877,343 		JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP RGD PMID:12939595 RGD:4144098 NCBI chr 9:68,614,153...68,737,037
Ensembl chr 9:68,614,153...68,737,033 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:17574236 RGD:2306655 NCBI chr 8:66,991,940...66,998,014
Ensembl chr 8:58,096,077...58,102,125 		JBrowse link
G E2f7 E2F transcription factor 7 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23064266)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23064266 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:48,036,881...48,079,055
Ensembl chr 7:46,151,293...46,192,734 		JBrowse link
G E2f8 E2F transcription factor 8 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23064264), (PMID:23064266)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23064264 PMID:23064266 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:107,701,985...107,720,538
Ensembl chr 1:98,565,717...98,584,098 		JBrowse link
G Foxh1 forkhead box H1 IEP RGD PMID:22715131 RGD:155791677 NCBI chr 7:108,387,969...108,391,566
Ensembl chr 7:108,387,969...108,390,049 		JBrowse link
G Frzb frizzled-related protein acts_upstream_of ISO
IEA 		(PMID:19562671)
GO_REF:0000107 		RGD
Ensembl		 PMID:19562671 GO_REF:0000107 NCBI chr 3:85,739,162...85,772,168
Ensembl chr 3:65,332,277...65,365,208 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:13,074,141...13,103,551
Ensembl chr20:13,074,700...13,108,442 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO
IEA 		MGI:2448661 (PMID:11027604)
GO_REF:0000107 		RGD
Ensembl		 PMID:11027604 GO_REF:0000107 NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Hnf1b HNF1 homeobox B IEP RGD PMID:18286537 RGD:2312718 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IEP RGD PMID:19621519 RGD:12904750 NCBI chr 3:172,606,220...172,667,758
Ensembl chr 3:152,186,787...152,248,320 		JBrowse link
G Itga2 integrin subunit alpha 2 IEP RGD PMID:16458388 RGD:2307397 NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481 		JBrowse link
G Krt18 keratin 18 IEP RGD PMID:24340101 PMID:28941653 RGD:27226712, RGD:27226713 NCBI chr 7:133,157,486...133,161,162
Ensembl chr 7:133,157,475...133,161,166
Ensembl chr10:133,157,475...133,161,166 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:182,348,572...182,354,521
Ensembl chr 3:161,930,256...161,936,191 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:32,997,853...33,006,691
Ensembl chr15:29,027,894...29,037,283 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO
IEA 		(PMID:15232737)
GO_REF:0000107 		RGD
Ensembl		 PMID:15232737 GO_REF:0000107 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 acts_upstream_of_or_within ISO MGI:2387974 (PMID:16138077) RGD PMID:16138077 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 acts_upstream_of_or_within ISO
IEA 		MGI:2176946|MGI:3606185 (PMID:18722179)
GO_REF:0000107 		RGD
Ensembl		 PMID:18722179 GO_REF:0000107 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376 		JBrowse link
G Wnt1 Wnt family member 1 IMP RGD PMID:20413689 RGD:2326223 NCBI chr 7:131,817,558...131,821,605
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpb CCAAT/enhancer binding protein beta involved_in IDA
ISO
IEA 		PMID:10635333
(PMID:10635333)
GO_REF:0000107 		RGD
Ensembl		 PMID:10635333 PMID:10635333 GO_REF:0000107, RGD:10047310 NCBI chr 3:176,817,005...176,818,436
Ensembl chr 3:156,397,052...156,399,473 		JBrowse link
G Fgl1 fibrinogen-like 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19880967) 		UniProt
Ensembl
RGD		 PMID:19880967 GO_REF:0000024 GO_REF:0000107 NCBI chr16:51,120,652...51,150,907
Ensembl chr16:51,120,694...51,151,093 		JBrowse link
G Il6 interleukin 6 involved_in ISS
ISO 		GO_REF:0000024
(PMID:8910279) 		UniProt
RGD		 PMID:8910279 GO_REF:0000024 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Mki67 marker of proliferation Ki-67 acts_upstream_of_or_within ISO (PMID:25446530) RGD PMID:25446530 NCBI chr 1:199,926,150...199,952,847
Ensembl chr 1:190,496,319...190,522,762 		JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO
IEA 		MGI:3617328 (PMID:25446530)
GO_REF:0000107 		RGD
Ensembl		 PMID:25446530 GO_REF:0000107 NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Prox1 prospero homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:2386336 (PMID:10888866)
GO_REF:0000107 		RGD
Ensembl		 PMID:10888866 GO_REF:0000107 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Rps6ka1 ribosomal protein S6 kinase A1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:10635333) 		UniProt
RGD		 PMID:10635333 GO_REF:0000024 NCBI chr 5:151,362,819...151,402,064
Ensembl chr 5:146,079,021...146,118,272 		JBrowse link
G Tgfa transforming growth factor alpha involved_in IDA
ISO 		PMID:10635333
(PMID:10635333) 		RGD PMID:10635333 PMID:10635333 RGD:10047310 NCBI chr 4:120,175,549...120,258,342
Ensembl chr 4:118,618,269...118,700,894 		JBrowse link
intrahepatic bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gak cyclin G associated kinase acts_upstream_of_or_within ISO MGI:2176228|MGI:5305733 (PMID:18434600) RGD PMID:18434600 NCBI chr14:1,089,853...1,164,098
Ensembl chr14:1,089,866...1,216,398 		JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO
IEA 		MGI:3617328 (PMID:25446530)
GO_REF:0000107 		RGD
Ensembl		 PMID:25446530 GO_REF:0000107 NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO
IEA 		MGI:2177602|MGI:2385468 (PMID:19403103)
GO_REF:0000107 		RGD
Ensembl		 PMID:19403103 GO_REF:0000107 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
liver development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aacs acetoacetyl-CoA synthetase IDA RGD PMID:10513626 RGD:2301023 NCBI chr12:36,774,471...36,817,835
Ensembl chr12:31,113,098...31,160,954 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain acts_upstream_of_or_within ISO
IEA 		MGI:3692446 (PMID:16121256)
GO_REF:0000107 		RGD
Ensembl		 PMID:16121256 GO_REF:0000107 NCBI chr 2:245,518,693...245,542,864
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 IEP RGD PMID:5166591 RGD:2326169 NCBI chr 8:62,876,003...62,905,080
Ensembl chr 8:53,979,813...54,008,855 		JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 IEP RGD PMID:5166591 RGD:2326169 NCBI chr 1:50,100,840...50,118,886
Ensembl chr 1:47,695,788...47,752,821 		JBrowse link
G Aco1 aconitase 1 IEP RGD PMID:755797 RGD:11552585 NCBI chr 5:55,259,841...55,315,872
Ensembl chr 5:55,259,827...55,316,391 		JBrowse link
G Aco2 aconitase 2 IEP RGD PMID:755797 RGD:11552585 NCBI chr 7:113,385,677...113,428,794
Ensembl chr 7:113,385,646...113,428,261 		JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO
IEA 		MGI:1857117|MGI:2155977 (PMID:7670465), (PMID:7731963)
GO_REF:0000107 		RGD
Ensembl		 PMID:7670465 PMID:7731963 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Adrb2 adrenoceptor beta 2 IEP RGD PMID:8408243 RGD:8548535 NCBI chr18:57,912,760...57,914,802
Ensembl chr18:55,502,903...55,644,512 		JBrowse link
G Afp alpha-fetoprotein IEP RGD PMID:16822301 RGD:2292045 NCBI chr14:17,857,584...17,875,645
Ensembl chr14:17,573,412...17,591,480 		JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (PMID:10973493), (PMID:7732381), (PMID:8692887) RGD PMID:7732381 PMID:8692887 PMID:10973493 NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:52,234,089...52,271,568 		JBrowse link
G Ak2 adenylate kinase 2 IEP RGD PMID:5123889 RGD:5490208 NCBI chr 5:141,308,650...141,364,633
Ensembl chr 5:141,346,063...141,364,632 		JBrowse link
G Ak3 adenylate kinase 3 IEP RGD PMID:5123889 RGD:5490208 NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625 		JBrowse link
G Ak4 adenylate kinase 4 IEP RGD PMID:9813319 RGD:632174 NCBI chr 5:116,039,222...116,099,064
Ensembl chr 5:116,039,616...116,098,618 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 IEP RGD PMID:14729401 RGD:1643117 NCBI chr 1:227,426,939...227,579,497
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 IEP RGD PMID:14729401 RGD:1643117 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member IEP RGD PMID:16291827 RGD:2300311 NCBI chr12:40,610,244...40,643,220
Ensembl chr12:34,901,219...34,982,521 		JBrowse link
G Aldh9a1 aldehyde dehydrogenase 9 family, member A1 IEP RGD PMID:19150623 RGD:2313411 NCBI chr13:82,038,679...82,055,478
Ensembl chr13:79,505,695...79,540,568 		JBrowse link
G Aldob aldolase, fructose-bisphosphate B IEP RGD PMID:8641049 RGD:2313428 NCBI chr 5:68,684,541...68,697,582
Ensembl chr 5:63,889,046...63,902,116 		JBrowse link
G Ang angiogenin IEP RGD PMID:2440105 RGD:2325721 NCBI chr15:26,786,233...26,796,883 JBrowse link
G Arf6 ARF GTPase 6 acts_upstream_of_or_within ISO
IEA 		MGI:3662650 (PMID:16880525)
GO_REF:0000107 		RGD
Ensembl		 PMID:16880525 GO_REF:0000107 NCBI chr 6:93,589,777...93,590,925
Ensembl chr 6:87,840,142...87,874,114 		JBrowse link
G Arg1 arginase 1 IEP RGD PMID:8690412 RGD:4144072 NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422 		JBrowse link
G Asl argininosuccinate lyase IEP
IDA 		DNA:increased methylation:5' utr RGD PMID:10473900 PMID:9535537 RGD:1599266, RGD:1599268 NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662 		JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) IEP RGD PMID:237754 RGD:2316008 NCBI chr 4:35,784,995...35,803,474
Ensembl chr 4:35,785,237...35,803,423 		JBrowse link
G Ass1 argininosuccinate synthase 1 IEP RGD PMID:10473900 PMID:9395312 RGD:1599266, RGD:4139912 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903 		JBrowse link
G Atf2 activating transcription factor 2 involved_in ISO MGI:2443472 (PMID:17699753) RGD PMID:17699753 NCBI chr 3:79,125,814...79,202,896
Ensembl chr 3:58,718,332...58,795,236 		JBrowse link
G Atf7 activating transcription factor 7 involved_in ISO MGI:109349 (PMID:17699753) RGD PMID:17699753 NCBI chr 7:133,660,491...133,750,902
Ensembl chr 7:133,663,294...133,750,848 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2176073|MGI:3587769 (PMID:15866887) RGD PMID:15866887 NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:147,718,752...147,925,593 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta IEP RGD PMID:8420961 RGD:13792579 NCBI chr 7:1,100,058...1,106,461
Ensembl chr 7:515,460...567,273 		JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:25349135 RGD:11341669 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Baat bile acid CoA:amino acid N-acyltransferase IEP RGD PMID:7575455 RGD:69770 NCBI chr 5:68,647,166...68,656,137
Ensembl chr 5:63,850,705...63,860,685 		JBrowse link
G Bdh1 3-hydroxybutyrate dehydrogenase 1 IEP RGD PMID:2806552 RGD:4105456 NCBI chr11:82,806,125...82,848,133
Ensembl chr11:69,302,534...69,337,671 		JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IEP RGD PMID:14160653 RGD:2303538 NCBI chr 6:25,292,133...25,315,078
Ensembl chr 6:25,292,133...25,319,861 		JBrowse link
G Cadm1 cell adhesion molecule 1 IMP RGD PMID:17326163 RGD:2289097 NCBI chr 8:47,847,836...48,178,703
Ensembl chr 8:47,847,325...48,182,833 		JBrowse link
G Cast calpastatin IEP RGD PMID:16871587 RGD:5683869 NCBI chr 2:3,973,112...4,082,658
Ensembl chr 2:3,973,112...4,082,659 		JBrowse link
G Ccnd1 cyclin D1 IEP RGD PMID:15809057 RGD:1582338 NCBI chr 1:209,518,288...209,527,986
Ensembl chr 1:200,089,002...200,098,602 		JBrowse link
G Ccnd2 cyclin D2 IEP RGD PMID:15809057 RGD:1582338 NCBI chr 4:161,653,048...161,675,422
Ensembl chr 4:159,962,363...159,989,495 		JBrowse link
G Ccne1 cyclin E1 IEP RGD PMID:15809057 RGD:1582338 NCBI chr 1:99,918,672...99,927,986
Ensembl chr 1:90,781,949...90,791,101 		JBrowse link
G Cd2ap CD2-associated protein acts_upstream_of_or_within ISO (PMID:29729186) RGD PMID:29729186 NCBI chr 9:25,580,071...25,679,968
Ensembl chr 9:18,086,984...18,182,199 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:30635284)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:30635284 GO_REF:0000024 GO_REF:0000107 NCBI chr10:81,894,393...81,903,581
Ensembl chr10:81,894,393...81,903,590 		JBrowse link
G Cdkn2b cyclin-dependent kinase inhibitor 2B IEP RGD PMID:11042273 RGD:7248763 NCBI chr 5:104,009,839...104,019,082
Ensembl chr 5:104,010,680...104,019,050 		JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha acts_upstream_of_or_within
involved_in 		IEP
IEA
ISO
ISS 		GO_REF:0000107
(PMID:8798745)
MGI:2177068 (PMID:17021047)
GO_REF:0000024 		Ensembl
RGD
UniProt		 PMID:8798745 PMID:17021047 PMID:16172914 GO_REF:0000024 GO_REF:0000107, RGD:1625368 NCBI chr 1:96,896,584...96,899,256
Ensembl chr 1:87,759,433...87,762,412 		JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IEP RGD PMID:1377818 RGD:69946 NCBI chr 3:176,817,005...176,818,436
Ensembl chr 3:156,397,052...156,399,473 		JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma involved_in IEP PMID:1377818 UniProt PMID:1377818 RGD:69946 NCBI chr 1:96,820,981...96,829,736
Ensembl chr 1:87,684,019...87,694,569 		JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 acts_upstream_of_or_within ISO
IEA 		MGI:2179530 (PMID:10521397)
GO_REF:0000107 		RGD
Ensembl		 PMID:10521397 GO_REF:0000107 NCBI chr 9:36,742,106...36,751,931
Ensembl chr 9:36,739,071...36,751,930 		JBrowse link
G Chek1_v2 checkpoint kinase 1, variant 2 IEP RGD PMID:11687578 RGD:70230
G Cit citron rho-interacting serine/threonine kinase IEP RGD PMID:12411428 RGD:628497 NCBI chr12:46,263,881...46,425,642
Ensembl chr12:40,605,563...40,763,860 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within
involved_in 		ISO MGI:2385355 (PMID:17644732)
(PMID:17932483) 		RGD PMID:17644732 PMID:17932483 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897 		JBrowse link
G Cobl cordon-bleu WH2 repeat protein involved_in IEA
ISO 		GO_REF:0000107
(PMID:7586755) 		Ensembl
RGD		 PMID:7586755 GO_REF:0000107 NCBI chr14:86,828,137...87,060,682
Ensembl chr14:86,828,139...87,060,800 		JBrowse link
G Cp ceruloplasmin acts_upstream_of_or_within IEP
ISO 		(PMID:36261001) RGD PMID:36261001 PMID:2332446 RGD:728241 NCBI chr 2:104,368,336...104,427,119
Ensembl chr 2:102,439,624...102,498,075 		JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP RGD PMID:8690412 RGD:4144072 NCBI chr 9:68,614,153...68,737,037
Ensembl chr 9:68,614,153...68,737,033 		JBrowse link
G Ctnnb1 catenin beta 1 IEP RGD PMID:17236583 RGD:1599633 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:12162855 RGD:727721 NCBI chr 8:66,991,940...66,998,014
Ensembl chr 8:58,096,077...58,102,125 		JBrowse link
G Cyp2d3 cytochrome P450, family 2, subfamily d, polypeptide 3 IEP RGD PMID:9929501 RGD:2301678 NCBI chr 7:113,917,711...113,922,068
Ensembl chr 7:113,908,947...113,922,084 		JBrowse link
G Dbp D-box binding PAR bZIP transcription factor IEP RGD PMID:2331750 RGD:727680 NCBI chr 1:105,312,256...105,317,205
Ensembl chr 1:96,175,440...96,180,745 		JBrowse link
G Ddx39b DExD-box helicase 39B IEP RGD PMID:1618789 RGD:632224 NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996 		JBrowse link
G Dut deoxyuridine triphosphatase IEP RGD PMID:11121581 RGD:5133681 NCBI chr 3:132,952,258...132,963,433
Ensembl chr 3:112,498,982...112,510,771 		JBrowse link
G Egfr epidermal growth factor receptor IEP RGD PMID:12454858 RGD:2289959 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Elk1 ETS transcription factor ELK1 acts_upstream_of_or_within ISO
IEA 		(PMID:31877385)
GO_REF:0000107 		RGD
Ensembl		 PMID:31877385 GO_REF:0000107 NCBI chr  X:3,692,367...3,709,252
Ensembl chr  X:1,139,756...1,155,713 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:10231554 RGD:13204733 NCBI chr 1:22,518,051...22,583,044
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Ephx1 epoxide hydrolase 1 IEP RGD PMID:2469391 RGD:4889418 NCBI chr13:95,246,079...95,275,852
Ensembl chr13:92,714,315...92,790,235 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IEP RGD PMID:12454858 RGD:2289959 NCBI chr10:83,907,491...83,931,365
Ensembl chr10:83,411,313...83,435,078 		JBrowse link
G Errfi1 ERBB receptor feedback inhibitor 1 acts_upstream_of_or_within ISO
IEA 		MGI:3769404 (PMID:22912762), (PMID:28053990)
GO_REF:0000107 		RGD
Ensembl		 PMID:22912762 PMID:28053990 GO_REF:0000107 NCBI chr 5:161,323,981...161,337,289
Ensembl chr 5:161,323,998...161,337,282 		JBrowse link
G Foxm1 forkhead box M1 acts_upstream_of_or_within ISO MGI:3522201 (PMID:15531365) RGD PMID:15531365 NCBI chr 4:163,325,628...163,338,100
Ensembl chr 4:161,638,816...161,650,684 		JBrowse link
G Fpgs folylpolyglutamate synthase IEP RGD PMID:1435744 RGD:2315102 NCBI chr 3:15,972,800...15,993,592
Ensembl chr 3:15,972,800...15,993,563 		JBrowse link
G Fscn1 fascin actin-bundling protein 1 IEP RGD PMID:18855019 RGD:2317768 NCBI chr12:16,710,601...16,723,734
Ensembl chr12:11,597,048...11,610,211 		JBrowse link
G Gata6 GATA binding protein 6 acts_upstream_of_or_within ISO MGI:3576383 (PMID:15767668) RGD PMID:15767668 NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,718,489...13,721,782
Ensembl chr10:13,718,489...13,720,869 		JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 IEP RGD PMID:3996734 RGD:2302171 NCBI chr15:18,596,180...18,608,854
Ensembl chr15:18,596,442...18,608,739 		JBrowse link
G H19 H19 imprinted maternally expressed transcript IEP RGD PMID:8981228 RGD:1342456 NCBI chr 1:197,730,698...197,733,374
Ensembl chr 1:197,730,698...197,733,134 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO
IEA 		MGI:2149672 (PMID:15578515)
GO_REF:0000107 		RGD
Ensembl		 PMID:15578515 GO_REF:0000107 NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hgf hepatocyte growth factor acts_upstream_of_or_within ISO
IEA 		(PMID:16880525)
GO_REF:0000107 		RGD
Ensembl		 PMID:16880525 GO_REF:0000107 NCBI chr 4:19,628,902...19,700,467
Ensembl chr 4:18,677,101...18,745,409 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO
IEA 		MGI:2177762|MGI:2448661|MGI:2449914 (PMID:10804184), (PMID:11027604), (PMID:15459110), (PMID:16364283)
GO_REF:0000107 		RGD
Ensembl		 PMID:10804184 PMID:11027604 PMID:15459110 PMID:16364283 GO_REF:0000107 NCBI chr 1:244,602,945...244,608,532
Ensembl chr 1:235,190,455...235,196,042 		JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of_or_within ISO
IEA 		MGI:2182089 (PMID:8557196)
GO_REF:0000107 		RGD
Ensembl		 PMID:8557196 GO_REF:0000107 NCBI chr13:98,811,852...98,817,264
Ensembl chr13:96,280,339...96,285,750 		JBrowse link
G Hmbs hydroxymethylbilane synthase IDA RGD PMID:971328 RGD:25394583 NCBI chr 8:44,673,554...44,680,950
Ensembl chr 8:44,673,554...44,680,957 		JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase IEP RGD PMID:13990 RGD:2326149 NCBI chr 5:153,461,738...153,475,552
Ensembl chr 5:148,178,252...148,192,068 		JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 IEP RGD PMID:5166591 RGD:2326169 NCBI chr 2:53,379,457...53,399,807
Ensembl chr 2:51,649,497...51,667,100 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:8620869 RGD:2326125 NCBI chr 2:188,564,348...188,590,872
Ensembl chr 2:185,875,616...185,902,130 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within
involved_in 		ISO
IEA 		MGI:2384429 (PMID:9566924)
GO_REF:0000107
GO_REF:0000002 		RGD
Ensembl
InterPro		 PMID:9566924 GO_REF:0000002 GO_REF:0000107 NCBI chr12:47,299,171...47,333,457
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within
involved_in 		ISO
IEA 		MGI:1857856 (PMID:18635606)
GO_REF:0000107
GO_REF:0000002 		RGD
Ensembl
InterPro		 PMID:18635606 GO_REF:0000002 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IEP RGD PMID:20102719 RGD:10042969 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:16488668 RGD:10002779 NCBI chr17:6,269,302...6,280,429
Ensembl chr17:6,262,998...6,274,997 		JBrowse link
G Hp haptoglobin IDA RGD PMID:16172914 RGD:1625368 NCBI chr19:37,539,626...37,544,178
Ensembl chr19:37,539,627...37,544,523 		JBrowse link
G Hpcal1 hippocalcin-like 1 acts_upstream_of_or_within ISO
IEA 		(PMID:36438486)
GO_REF:0000107 		RGD
Ensembl		 PMID:36438486 GO_REF:0000107 NCBI chr 6:40,478,206...40,584,721
Ensembl chr 6:40,478,208...40,584,687 		JBrowse link
G Hras HRas proto-oncogene, GTPase IEP RGD PMID:2581126 RGD:14694813 NCBI chr 1:205,712,625...205,729,406
Ensembl chr 1:196,296,263...196,300,615 		JBrowse link
G Hspa12a heat shock protein family A (Hsp70) member 12A acts_upstream_of_or_within ISO
IEA 		(PMID:30455376)
GO_REF:0000107 		RGD
Ensembl		 PMID:30455376 GO_REF:0000107 NCBI chr 1:257,935,642...258,096,602
Ensembl chr 1:257,935,644...258,096,846 		JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase acts_upstream_of_or_within ISO MGI:2183607 (PMID:12105862) RGD PMID:12105862 NCBI chr 5:162,804,368...162,811,129
Ensembl chr 5:162,804,368...162,811,128 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527 (PMID:11773599), (PMID:9176412) RGD PMID:9176412 PMID:11773599 NCBI chr15:35,685,678...35,786,875
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Igf2r insulin-like growth factor 2 receptor IDA RGD PMID:12127995 RGD:2311626 NCBI chr 1:47,979,109...48,067,501
Ensembl chr 1:47,979,109...48,067,501 		JBrowse link
G Insr insulin receptor IEP RGD PMID:6364984 RGD:14701029 NCBI chr12:5,991,135...6,129,275
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 acts_upstream_of_or_within ISO MGI:1856923 (PMID:9376320) RGD PMID:9376320 NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO
IEA 		MGI:2149630 (PMID:10352021)
GO_REF:0000107 		RGD
Ensembl		 PMID:10352021 GO_REF:0000107 NCBI chr 5:115,009,900...115,012,993
Ensembl chr 5:109,893,145...109,897,656 		JBrowse link
G Klf1 KLF transcription factor 1 acts_upstream_of_or_within ISO MGI:1857557 (PMID:7753194) RGD PMID:7753194 NCBI chr19:23,250,627...23,253,802
Ensembl chr19:23,250,631...23,253,758 		JBrowse link
G Kras KRAS proto-oncogene, GTPase IEP RGD PMID:1526114 RGD:11060153 NCBI chr 4:179,916,255...179,949,613 JBrowse link
G Lbp lipopolysaccharide binding protein IEP RGD PMID:20978830 RGD:9685195 NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586 		JBrowse link
G Ldha lactate dehydrogenase A IDA RGD PMID:6849973 RGD:1600284 NCBI chr 1:106,508,092...106,517,512
Ensembl chr 1:97,366,021...97,433,472 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO
IEA 		MGI:2451080 (PMID:24370824), (PMID:25147230)
GO_REF:0000107 		RGD
Ensembl		 PMID:24370824 PMID:25147230 GO_REF:0000107 NCBI chr 1:241,437,524...241,470,936
Ensembl chr 1:232,024,356...232,057,633 		JBrowse link
G Lipc lipase C, hepatic type IEP RGD PMID:11004003 RGD:2307448 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464 		JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:15265030) 		HGNC
Ensembl
RGD		 PMID:15265030 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:95,313,830...95,329,471
Ensembl chr 1:86,186,431...86,201,952 		JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 acts_upstream_of_or_within ISO MGI:2150656 (PMID:16754854) RGD PMID:16754854 NCBI chr 9:104,252,001...104,408,349
Ensembl chr 9:104,252,001...104,408,349 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO
IEA 		MGI:2684189 (PMID:14500757)
GO_REF:0000107 		RGD
Ensembl		 PMID:14500757 GO_REF:0000107 NCBI chr10:83,641,851...83,685,560
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Meg3 maternally expressed 3 acts_upstream_of_or_within ISO MGI:3842511 (PMID:19264764) RGD PMID:19264764 NCBI chr 6:128,491,808...128,524,010 JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within
involved_in 		IEP
ISO
IBA 		MGI:1857655 (PMID:7651534)
GO_REF:0000033 		RGD
GO_Central		 PMID:7651534 PMID:8506951 GO_REF:0000033, RGD:2317549 NCBI chr 4:46,756,823...46,864,041
Ensembl chr 4:45,790,791...45,897,876 		JBrowse link
G Mpst mercaptopyruvate sulfurtransferase IDA RGD PMID:6573924 RGD:9685558 NCBI chr 7:111,836,079...111,843,651
Ensembl chr 7:109,955,675...109,963,141 		JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within ISO MGI:3587937 (PMID:17183527) RGD PMID:17183527 NCBI chr10:1,116,315...1,278,106
Ensembl chr10:1,116,310...1,277,897 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO
IEA 		MGI:1934018 (PMID:19632871)
GO_REF:0000107 		RGD
Ensembl		 PMID:19632871 GO_REF:0000107 NCBI chr10:86,501,864...86,509,333
Ensembl chr10:86,001,566...86,008,972 		JBrowse link
G Nat1 N-acetyltransferase 1 IEP RGD PMID:18799802 RGD:2303764 NCBI chr16:26,984,882...27,005,194
Ensembl chr16:22,208,194...22,238,520 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
MGI:1857444 (PMID:7926784) 		HGNC-UCL
Ensembl
RGD		 PMID:7926784 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO
IEA 		MGI:2158732 (PMID:11311163)
GO_REF:0000107 		RGD
Ensembl		 PMID:11311163 GO_REF:0000107 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO
IEA 		(PMID:15226394)
GO_REF:0000107 		RGD
Ensembl		 PMID:15226394 GO_REF:0000107 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO
IEA 		MGI:3617328 (PMID:25446530)
GO_REF:0000107 		RGD
Ensembl		 PMID:25446530 GO_REF:0000107 NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within ISO
IEA 		MGI:1857409 (PMID:21289032)
GO_REF:0000107 		RGD
Ensembl		 PMID:21289032 GO_REF:0000107 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 IEP RGD PMID:17341476 RGD:401827282 NCBI chr 3:97,614,616...97,632,053
Ensembl chr 3:77,158,808...77,168,722 		JBrowse link
G Nts neurotensin IEP RGD PMID:8342998 RGD:9743870 NCBI chr 7:37,564,944...37,574,350
Ensembl chr 7:37,564,533...37,574,423 		JBrowse link
G Onecut1 one cut homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:1891408 (PMID:17936262)
GO_REF:0000107 		RGD
Ensembl		 PMID:17936262 GO_REF:0000107 NCBI chr 8:84,480,066...84,507,848
Ensembl chr 8:75,599,740...75,627,277 		JBrowse link
G Onecut2 one cut homeobox 2 acts_upstream_of_or_within ISO
IEA 		MGI:1196423 (PMID:17936262)
GO_REF:0000107 		RGD
Ensembl		 PMID:17936262 GO_REF:0000107 NCBI chr18:57,831,647...57,890,884
Ensembl chr18:57,832,111...57,879,629 		JBrowse link
G Otc ornithine transcarbamylase IEP RGD PMID:8690412 RGD:4144072 NCBI chr  X:12,453,834...12,529,954
Ensembl chr  X:12,453,834...12,566,918 		JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in IEP
IEA
ISO 		PMID:12552133
GO_REF:0000107
(PMID:12552133) 		Ensembl
RGD		 PMID:12552133 PMID:12552133 GO_REF:0000107, RGD:629554 NCBI chr 5:121,211,278...121,233,688
Ensembl chr 5:121,211,278...121,233,688 		JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 acts_upstream_of_or_within ISO
IEA 		MGI:2388676 (PMID:19619492)
GO_REF:0000107 		RGD
Ensembl		 PMID:19619492 GO_REF:0000107 NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha acts_upstream_of_or_within ISO
IEA 		MGI:4845856 (PMID:24691033)
GO_REF:0000107 		RGD
Ensembl		 PMID:24691033 GO_REF:0000107 NCBI chr 2:117,103,643...117,177,411
Ensembl chr 2:115,174,984...115,249,032 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO
IEA 		MGI:1099818 (PMID:21685914)
GO_REF:0000107 		RGD
Ensembl		 PMID:21685914 GO_REF:0000107 NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in
acts_upstream_of_or_within 		ISO (PMID:11891195)
MGI:97603 (PMID:21685914) 		RGD PMID:11891195 PMID:21685914 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Pkm pyruvate kinase M1/2 IDA RGD PMID:7327170 RGD:2303137 NCBI chr 8:68,949,731...68,975,394
Ensembl chr 8:60,057,402...60,079,599 		JBrowse link
G Ppdpf pancreatic progenitor cell differentiation and proliferation factor acts_upstream_of_or_within ISO (PMID:34031390) RGD PMID:34031390 NCBI chr 3:168,299,309...168,301,040
Ensembl chr 3:168,299,791...168,301,036 		JBrowse link
G Prkcsh PRKCSH beta subunit of glucosidase II acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		MGI:2155302 (PMID:21685914)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:21685914 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:20,534,787...20,546,493
Ensembl chr 8:20,534,880...20,546,492 		JBrowse link
G Proc protein C, inactivator of coagulation factors Va and VIIIa acts_upstream_of_or_within IEP
ISO 		MGI:2183063 (PMID:9788960) RGD PMID:9788960 PMID:7660357 RGD:1299299 NCBI chr18:24,038,596...24,049,061
Ensembl chr18:23,764,368...23,775,133 		JBrowse link
G Pros1 protein S IEP RGD PMID:7660357 RGD:1299299 NCBI chr11:13,676,310...13,757,858
Ensembl chr11:230,696...311,286 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IEP
IEA
ISO 		GO_REF:0000107
(PMID:11789987) 		Ensembl
RGD		 PMID:11789987 PMID:16770575 GO_REF:0000107, RGD:5133274 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Psmb9 proteasome 20S subunit beta 9 IEP RGD PMID:24707720 RGD:9854625 NCBI chr20:4,667,044...4,672,512
Ensembl chr20:4,666,046...4,672,512 		JBrowse link
G Ptcd2 pentatricopeptide repeat domain 2 acts_upstream_of_or_within ISO
IEA 		MGI:3830811 (PMID:18729827)
GO_REF:0000107 		RGD
Ensembl		 PMID:18729827 GO_REF:0000107 NCBI chr 2:30,712,276...30,739,968
Ensembl chr 2:30,712,280...30,739,942 		JBrowse link
G Ptn pleiotrophin IEP RGD PMID:12057922 RGD:727382 NCBI chr 4:66,260,764...66,342,614
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Qdpr quinoid dihydropteridine reductase IEP RGD PMID:710385 RGD:5128606 NCBI chr14:69,882,776...69,896,378
Ensembl chr14:65,670,131...65,683,854 		JBrowse link
G Rara retinoic acid receptor, alpha IEP RGD PMID:15388488 RGD:2314298 NCBI chr10:84,379,780...84,424,371
Ensembl chr10:83,893,384...83,928,142 		JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 acts_upstream_of_or_within ISO
IEA 		MGI:3690329 (PMID:17015619)
GO_REF:0000107 		RGD
Ensembl		 PMID:17015619 GO_REF:0000107 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560 		JBrowse link
G Rcbtb2 RCC1 and BTB domain containing protein 2 acts_upstream_of_or_within ISO
IEA 		(PMID:26291700)
GO_REF:0000107 		RGD
Ensembl		 PMID:26291700 GO_REF:0000107 NCBI chr15:48,319,809...48,364,441
Ensembl chr15:48,323,866...48,383,750 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO
IEA 		(PMID:7603567)
GO_REF:0000107 		RGD
Ensembl		 PMID:7603567 GO_REF:0000107 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:202,924,945...202,935,484 		JBrowse link
G Rgn regucalcin IEP RGD PMID:9546611 PMID:8794449 RGD:9590173, RGD:9590212 NCBI chr  X:1,619,030...1,634,456
Ensembl chr  X:1,619,032...1,634,450 		JBrowse link
G Rhbdd3 rhomboid domain containing 3 acts_upstream_of_or_within ISO
IEA 		MGI:5516031 (PMID:23610400)
GO_REF:0000107 		RGD
Ensembl		 PMID:23610400 GO_REF:0000107 NCBI chr14:79,994,111...80,000,294
Ensembl chr14:79,994,158...80,000,175 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083 		JBrowse link
G Runx1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO MGI:3043614 (PMID:16174759) RGD PMID:16174759 NCBI chr11:45,325,778...45,560,300
Ensembl chr11:31,843,764...32,074,542 		JBrowse link
G Rxra retinoid X receptor alpha IEP RGD PMID:14729401 RGD:1643117 NCBI chr 3:31,387,892...31,474,415
Ensembl chr 3:10,989,832...11,073,712 		JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO (PMID:36301669) RGD PMID:36301669 NCBI chr10:51,744,656...51,757,246
Ensembl chr10:51,744,656...51,757,237 		JBrowse link
G Sec63 SEC63 homolog, protein translocation regulator acts_upstream_of_or_within ISO
IEA 		MGI:107877|MGI:5442171 (PMID:21685914)
GO_REF:0000107 		RGD
Ensembl		 PMID:21685914 GO_REF:0000107 NCBI chr20:46,245,101...46,314,055
Ensembl chr20:46,245,101...46,314,055 		JBrowse link
G Slc25a4 solute carrier family 25 member 4 IEP RGD PMID:9468308 RGD:9681468 NCBI chr16:52,805,521...52,809,316
Ensembl chr16:46,072,939...46,076,733 		JBrowse link
G Slco1b2 solute carrier organic anion transporter family member 1B2 IEP RGD PMID:15288467 RGD:2303131 NCBI chr 4:174,551,463...174,619,988
Ensembl chr 4:174,551,480...174,619,981 		JBrowse link
G Slco2b1 solute carrier organic anion transporter family, member 2b1 IEP RGD PMID:15345472 RGD:2316987 NCBI chr 1:163,371,410...163,419,412
Ensembl chr 1:153,959,293...154,007,353 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO
IEA 		MGI:108051 (PMID:15183723)
GO_REF:0000107 		RGD
Ensembl		 PMID:15183723 GO_REF:0000107 NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO MGI:2386105|MGI:3611933 (PMID:16287714) RGD PMID:16287714 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO
IEA 		MGI:2177602|MGI:2447406 (PMID:17367743)
GO_REF:0000107 		RGD
Ensembl		 PMID:17367743 GO_REF:0000107 NCBI chr 1:50,043,323...50,050,168
Ensembl chr 1:47,636,528...47,645,189 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:135,419,864...135,450,513
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO
IEA 		MGI:98372 (PMID:17584888)
GO_REF:0000107 		RGD
Ensembl		 PMID:17584888 GO_REF:0000107 NCBI chr 3:78,219,421...78,272,318
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:35,514,914...35,548,898
Ensembl chr 1:33,686,391...33,720,461 		JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IEP RGD PMID:9199345 RGD:11039429 NCBI chr 6:100,605,165...100,610,192
Ensembl chr 6:100,605,456...100,610,177 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B IDA RGD PMID:17565389 RGD:2291935 NCBI chr10:86,205,148...86,276,178
Ensembl chr10:85,705,670...85,775,668 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 acts_upstream_of_or_within ISO
IEA 		MGI:2176946|MGI:3606185 (PMID:18722179)
GO_REF:0000107 		RGD
Ensembl		 PMID:18722179 GO_REF:0000107 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (PMID:12773577) RGD PMID:12773577 NCBI chr14:2,634,294...2,810,269
Ensembl chr14:2,489,397...2,663,341 		JBrowse link
G Thra thyroid hormone receptor alpha IEP RGD PMID:17496154 RGD:2314319 NCBI chr10:84,198,141...84,225,659
Ensembl chr10:83,700,755...83,729,936 		JBrowse link
G Thra_v1 thyroid hormone receptor alpha, variant 1 IEP RGD PMID:17496154 RGD:2314319
G Thra_v2 thyroid hormone receptor alpha, variant 2 IEP RGD PMID:17496154 RGD:2314319
G Tk1 thymidine kinase 1 IEP RGD PMID:995499 RGD:2317236 NCBI chr10:103,533,449...103,544,818
Ensembl chr10:103,031,521...103,046,920 		JBrowse link
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 acts_upstream_of_or_within IEP
ISO 		(PMID:33961837) RGD PMID:33961837 PMID:16310220 PMID:18938141 RGD:2315453, RGD:2317023 NCBI chr 9:96,249,143...96,256,264
Ensembl chr 9:88,713,184...88,808,465 		JBrowse link
G Ugt1a2 UDP glucuronosyltransferase 1 family, polypeptide A2 IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:96,239,019...96,256,264
Ensembl chr 9:88,713,184...88,808,465 		JBrowse link
G Ugt1a5 UDP glucuronosyltransferase family 1 member A5 IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:88,762,250...88,808,465
Ensembl chr 9:88,713,184...88,808,465 		JBrowse link
G Ugt1a6 UDP glucuronosyltransferase family 1 member A6 IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:96,195,018...96,256,264
Ensembl chr 9:88,713,184...88,808,465 		JBrowse link
G Ugt1a7c UDP glucuronosyltransferase 1 family, polypeptide A7C involved_in IEP
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:18938141 GO_REF:0000033, RGD:2317023 NCBI chr 9:88,739,577...88,808,465
Ensembl chr 9:88,713,184...88,808,465 		JBrowse link
G Ugt1a8 UDP glucuronosyltransferase family 1 member A8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:88,727,094...88,808,465
Ensembl chr 9:88,713,184...88,808,465 		JBrowse link
G Upb1 beta-ureidopropionase 1 IDA RGD PMID:6870258 RGD:2317093 NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590 		JBrowse link
G Upf2 UPF2, regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO MGI:3790198 (PMID:20657840) RGD PMID:20657840 NCBI chr17:72,224,575...72,335,896
Ensembl chr17:72,225,316...72,335,855 		JBrowse link
G Urod uroporphyrinogen decarboxylase IEP RGD PMID:6219675 RGD:4145103 NCBI chr 5:130,464,695...130,468,783
Ensembl chr 5:130,455,217...130,468,808 		JBrowse link
G Vwf von Willebrand factor acts_upstream_of_or_within ISO MGI:1857656 (PMID:7854452) RGD PMID:7854452 NCBI chr 4:160,042,900...160,177,757
Ensembl chr 4:158,360,152...158,491,539 		JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO
IEA 		(PMID:15312687)
GO_REF:0000107 		RGD
Ensembl		 PMID:15312687 GO_REF:0000107 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:10652269) 		UniProt
Ensembl
RGD		 PMID:10652269 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,604,623...84,609,707
Ensembl chr14:80,390,643...80,395,693 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO
IEA 		MGI:2180033 (PMID:23117660)
GO_REF:0000107 		RGD
Ensembl		 PMID:23117660 GO_REF:0000107 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
liver morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 acts_upstream_of_or_within ISO
IEA 		MGI:3714267 (PMID:17339333)
GO_REF:0000107 		RGD
Ensembl		 PMID:17339333 GO_REF:0000107 NCBI chr 9:89,040,987...89,118,775
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO
IEA 		MGI:2451080 (PMID:24370824)
GO_REF:0000107 		RGD
Ensembl		 PMID:24370824 GO_REF:0000107 NCBI chr 1:241,437,524...241,470,936
Ensembl chr 1:232,024,356...232,057,633 		JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO
IEA 		MGI:3617328 (PMID:25446530)
GO_REF:0000107 		RGD
Ensembl		 PMID:25446530 GO_REF:0000107 NCBI chr 2:188,299,336...188,432,823
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within ISO MGI:5301343 (PMID:21803851) RGD PMID:21803851 NCBI chr 2:224,662,654...224,746,819
Ensembl chr 2:221,988,645...222,072,534 		JBrowse link
liver regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 IEP RGD PMID:8855951 RGD:8548508 NCBI chr18:57,912,760...57,914,802
Ensembl chr18:55,502,903...55,644,512 		JBrowse link
G Afp alpha-fetoprotein IEP RGD PMID:2460696 RGD:126848734 NCBI chr14:17,857,584...17,875,645
Ensembl chr14:17,573,412...17,591,480 		JBrowse link
G Alas2 5'-aminolevulinate synthase 2 IEP RGD PMID:6895999 RGD:11035238 NCBI chr  X:19,463,146...19,486,526
Ensembl chr  X:19,463,171...19,486,519 		JBrowse link
G Angpt1 angiopoietin 1 IEP RGD PMID:11549276 RGD:704403 NCBI chr 7:75,415,959...75,668,696
Ensembl chr 7:73,531,486...73,784,067 		JBrowse link
G Ar androgen receptor IEP RGD PMID:2598758 RGD:407424617 NCBI chr  X:67,135,317...67,304,476
Ensembl chr  X:63,104,771...63,273,925 		JBrowse link
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 IEP RGD PMID:11032760 RGD:13782137 NCBI chr10:58,079,710...58,111,279
Ensembl chr10:57,582,128...57,612,748 		JBrowse link
G Aurka aurora kinase A acts_upstream_of_or_within ISO
IEA 		(PMID:19435814)
GO_REF:0000107 		RGD
Ensembl		 PMID:19435814 GO_REF:0000107 NCBI chr 3:181,546,742...181,562,890
Ensembl chr 3:161,128,313...161,144,390 		JBrowse link
G Bcl2 BCL2, apoptosis regulator IEP RGD PMID:21503946 RGD:11531107 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Car3 carbonic anhydrase 3 IDA RGD PMID:19639563 RGD:408427362 NCBI chr 2:88,491,666...88,501,299
Ensembl chr 2:86,770,420...86,784,280 		JBrowse link
G Ccnd1 cyclin D1 acts_upstream_of_or_within ISO
IEA 		(PMID:23740243)
GO_REF:0000107 		RGD
Ensembl		 PMID:23740243 GO_REF:0000107 NCBI chr 1:209,518,288...209,527,986
Ensembl chr 1:200,089,002...200,098,602 		JBrowse link
G Cdk2 cyclin dependent kinase 2 IEP RGD PMID:16534847 PMID:15696186 RGD:2289284, RGD:2301349 NCBI chr 7:1,714,392...1,721,964
Ensembl chr 7:1,129,811...1,137,403 		JBrowse link
G Cebpb CCAAT/enhancer binding protein beta involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:9727068)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:9727068 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:176,817,005...176,818,436
Ensembl chr 3:156,397,052...156,399,473 		JBrowse link
G Cftr CF transmembrane conductance regulator IEP RGD PMID:1378998 RGD:11567227 NCBI chr 4:47,422,084...47,694,646
Ensembl chr 4:46,560,885...46,728,756 		JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:15826721 RGD:11344894 NCBI chr11:87,926,376...87,941,533
Ensembl chr11:74,421,569...74,436,724 		JBrowse link
G Cpb2 carboxypeptidase B2 IEP RGD PMID:19386599 RGD:7243112 NCBI chr15:56,967,128...57,015,964
Ensembl chr15:50,557,717...50,606,556 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IEP RGD PMID:31953200 RGD:25823179 NCBI chr 1:209,993,881...210,056,329
Ensembl chr 1:200,565,613...200,627,055 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 IEP RGD PMID:8573159 RGD:11565141 NCBI chr 3:161,170,295...161,217,073
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 IEP RGD PMID:8573159 RGD:11565141 NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080 		JBrowse link
G Csnk2b casein kinase 2 beta IEP RGD PMID:8573159 RGD:11565141 NCBI chr20:3,704,833...3,709,999
Ensembl chr20:3,698,733...3,707,133 		JBrowse link
G Egfr epidermal growth factor receptor IEP
IMP 		RGD PMID:2401457 PMID:20395437 RGD:10395295, RGD:38599218 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:107940 (PMID:25477280) RGD PMID:25477280 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO
IEA 		MGI:1097695 (PMID:25477280)
GO_REF:0000107 		RGD
Ensembl		 PMID:25477280 GO_REF:0000107 NCBI chr 4:77,624,223...77,698,598
Ensembl chr 4:76,624,399...76,687,362 		JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:10632538 RGD:8662889 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G Fga fibrinogen alpha chain IEP RGD PMID:3817019 RGD:728788 NCBI chr 2:170,672,169...170,679,572
Ensembl chr 2:168,374,120...168,381,528 		JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 IEP RGD PMID:16162160 RGD:10402121 NCBI chr12:12,333,050...12,504,750
Ensembl chr12:7,297,292...7,468,626 		JBrowse link
G Flt3 Fms related receptor tyrosine kinase 3 IEP RGD PMID:18031378 RGD:2302207 NCBI chr12:12,660,035...12,735,584
Ensembl chr12:7,623,930...7,699,474 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration IMP RGD PMID:24880092 RGD:9685725 NCBI chr10:13,718,489...13,721,782
Ensembl chr10:13,718,489...13,720,869 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:13,074,141...13,103,551
Ensembl chr20:13,074,700...13,108,442 		JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within IEP
IEA
ISO 		GO_REF:0000107
MGI:1857797 (PMID:23740243) 		Ensembl
RGD		 PMID:23740243 PMID:22790641 PMID:22024090 GO_REF:0000107, RGD:12832760, RGD:12911223 NCBI chr 7:65,042,237...65,054,888
Ensembl chr 7:63,156,926...63,169,251 		JBrowse link
G Gli3 GLI family zinc finger 3 IEP RGD PMID:22024090 RGD:12911223 NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gucd1 guanylyl cyclase domain containing 1 IEP RGD PMID:24743017 RGD:151665336 NCBI chr20:13,145,617...13,156,330
Ensembl chr20:13,146,076...13,156,328 		JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:22364558 RGD:8694419 NCBI chr 1:95,298,332...95,300,271
Ensembl chr 1:86,170,901...86,172,891 		JBrowse link
G Hfe homeostatic iron regulator IEP RGD PMID:22364558 RGD:8694419 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502 		JBrowse link
G Hgf hepatocyte growth factor IEP RGD PMID:19638569 RGD:2313572 NCBI chr 4:19,628,902...19,700,467
Ensembl chr 4:18,677,101...18,745,409 		JBrowse link
G Hmox1 heme oxygenase 1 IMP RGD PMID:24815159 RGD:10755743 NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,467,244...13,474,079 		JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 IEP RGD PMID:16081591 RGD:1599972 NCBI chr 1:182,412,216...182,415,447
Ensembl chr 1:182,412,151...182,415,442 		JBrowse link
G Ihh Indian hedgehog signaling molecule IEP RGD PMID:22024090 RGD:12911223 NCBI chr 9:83,952,986...83,959,203
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Il10 interleukin 10 IEP RGD PMID:11813605 RGD:11049526 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:42,472,839...42,477,313 		JBrowse link
G Il18 interleukin 18 IEP RGD PMID:24412291 RGD:14696652 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:50,906,960...50,932,887 		JBrowse link
G Il6 interleukin 6 involved_in ISS
IEP
ISO 		GO_REF:0000024
(PMID:8910279) 		UniProt
RGD		 PMID:8910279 PMID:28358702 GO_REF:0000024, RGD:598099567 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Insr insulin receptor IEP RGD PMID:23633480 RGD:9685423 NCBI chr12:5,991,135...6,129,275
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 IMP RGD PMID:24814243 RGD:13793384 NCBI chr 4:142,743,401...143,066,505
Ensembl chr 4:141,187,418...141,510,491 		JBrowse link
G Klkb1 kallikrein B1 IEP RGD PMID:9869390 RGD:7297052 NCBI chr16:53,690,180...53,714,570
Ensembl chr16:46,958,707...46,982,053 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:3335218 RGD:10059623 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Ncl nucleolin IEP RGD PMID:7490256 RGD:9686389 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136 		JBrowse link
G Nfkbia NFKB inhibitor alpha IEP RGD PMID:24446557 RGD:150429839 NCBI chr 6:78,593,844...78,597,307
Ensembl chr 6:72,858,712...72,861,941 		JBrowse link
G Npm1 nucleophosmin 1 IEP RGD PMID:14635188 RGD:11534994 NCBI chr10:18,245,739...18,255,913
Ensembl chr10:17,739,941...17,751,645
Ensembl chr  X:17,739,941...17,751,645 		JBrowse link
G Pcna proliferating cell nuclear antigen IEP RGD PMID:7906221 RGD:10448980 NCBI chr 3:139,951,948...139,955,820
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 IEP RGD PMID:191106 RGD:11554175 NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696 		JBrowse link
G Pou2f1 POU class 2 homeobox 1 IEP RGD PMID:1841628 RGD:9743904 NCBI chr13:78,120,617...78,263,306
Ensembl chr13:78,130,685...78,263,363 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 IEP RGD PMID:15837430 RGD:2299961 NCBI chr 1:104,595,339...104,605,552
Ensembl chr 1:95,458,850...95,468,345 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 IEP RGD PMID:15837430 RGD:2299961 NCBI chr15:31,938,927...31,948,318
Ensembl chr15:27,968,910...27,978,296 		JBrowse link
G Ptch1 patched 1 IEP RGD PMID:22024090 RGD:12911223 NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Ptpn3 protein tyrosine phosphatase, non-receptor type 3 IEP RGD PMID:7591957 RGD:1599982 NCBI chr 5:71,908,520...72,027,323
Ensembl chr 5:71,911,135...72,065,443 		JBrowse link
G Rap1a RAP1A, member of RAS oncogene family IEP RGD PMID:9015365 RGD:10003155 NCBI chr 2:195,896,967...195,974,851
Ensembl chr 2:193,208,635...193,286,501 		JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IEP RGD PMID:22227930 RGD:9850085 NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521 		JBrowse link
G Reg1a regenerating family member 1 alpha IEP RGD PMID:19284990 RGD:10044030 NCBI chr 4:112,450,466...112,453,130
Ensembl chr 4:110,892,453...110,895,570 		JBrowse link
G Rgn regucalcin IEP RGD PMID:7759556 RGD:9590197 NCBI chr  X:1,619,030...1,634,456
Ensembl chr  X:1,619,032...1,634,450 		JBrowse link
G Rpl10 ribosomal protein L10 IEP RGD PMID:6121318 RGD:11038709 NCBI chr  X:152,054,562...152,056,769
Ensembl chr  X:152,054,452...152,056,761 		JBrowse link
G Rpl13 ribosomal protein L13 IEP RGD PMID:6121318 RGD:11038709 NCBI chr19:51,153,990...51,156,541
Ensembl chr19:51,153,924...51,163,014
Ensembl chr 3:51,153,924...51,163,014 		JBrowse link
G Rpl18 ribosomal protein L18 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 1:96,188,811...96,191,452
Ensembl chr 1:96,188,112...96,191,452 		JBrowse link
G Rpl19 ribosomal protein L19 IEP RGD PMID:6121318 RGD:11038709 NCBI chr10:83,022,503...83,026,030
Ensembl chr10:83,019,257...83,052,112 		JBrowse link
G Rpl30 ribosomal protein L30 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 7:65,648,266...65,651,401
Ensembl chr 7:65,645,991...65,651,363
Ensembl chr10:65,645,991...65,651,363
Ensembl chr 1:65,645,991...65,651,363 		JBrowse link
G Rpl32 ribosomal protein L32 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 4:148,864,048...148,867,612
Ensembl chr 4:148,864,044...148,867,612
Ensembl chr 3:148,864,044...148,867,612 		JBrowse link
G Rpl7 ribosomal protein L7 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 5:3,217,184...3,220,192 JBrowse link
G Rps15 ribosomal protein S15 IEP RGD PMID:2829897 RGD:11040696 NCBI chr 7:9,416,003...9,417,442
Ensembl chr 7:9,416,004...9,417,450
Ensembl chr 7:9,416,004...9,417,450 		JBrowse link
G Rps16 ribosomal protein S16 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 1:83,643,066...83,646,056
Ensembl chr 1:83,643,130...83,646,206
Ensembl chr19:83,643,130...83,646,206 		JBrowse link
G Rps24 ribosomal protein S24 IEP RGD PMID:7612009 RGD:11041663 NCBI chr16:89,538...94,267
Ensembl chr16:89,604...94,279 		JBrowse link
G Serpina10 serpin family A member 10 IEP RGD PMID:8670294 RGD:729731 NCBI chr 6:122,756,106...122,764,544
Ensembl chr 6:122,756,108...122,764,544 		JBrowse link
G Shh sonic hedgehog signaling molecule IEP RGD PMID:22790641 RGD:12832760 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Slc22a4 solute carrier family 22 member 4 IEP RGD PMID:16343078 RGD:2303088 NCBI chr10:38,133,333...38,179,932
Ensembl chr10:38,133,322...38,179,720 		JBrowse link
G Slc22a5 solute carrier family 22 member 5 IEP RGD PMID:16343078 RGD:2303088 NCBI chr10:38,008,303...38,035,474
Ensembl chr10:38,008,311...38,035,309 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 IEP RGD PMID:9882595 RGD:151357002 NCBI chr19:66,843,808...66,872,412
Ensembl chr19:49,935,220...49,963,823 		JBrowse link
G Slco1a5 solute carrier organic anion transporter family, member 1A5 IEP RGD PMID:16343078 RGD:2303088 NCBI chr 4:175,172,390...175,254,598
Ensembl chr 4:174,710,004...175,254,573 		JBrowse link
G Slco1a6 solute carrier organic anion transporter family, member 1a6 IEP RGD PMID:16343078 RGD:2303088 NCBI chr 4:175,072,143...175,107,950
Ensembl chr 4:175,072,143...175,117,263 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 IEP RGD PMID:23633480 RGD:9685423 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336 		JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IEP RGD PMID:7686911 RGD:729792 NCBI chr 6:100,605,165...100,610,192
Ensembl chr 6:100,605,456...100,610,177 		JBrowse link
G Sulf2 sulfatase 2 acts_upstream_of_or_within ISO
IEA 		MGI:3587954 (PMID:23740243)
GO_REF:0000107 		RGD
Ensembl		 PMID:23740243 GO_REF:0000107 NCBI chr 3:154,822,079...154,904,566
Ensembl chr 3:154,822,085...154,904,415 		JBrowse link
G Tat tyrosine aminotransferase IEP RGD PMID:6104605 RGD:597621659 NCBI chr19:37,947,153...37,957,717
Ensembl chr19:37,947,112...37,958,031 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:25862490 RGD:11073669 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:9178702 PMID:28358702 RGD:14995465, RGD:598099567 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Tyms thymidylate synthetase IEP RGD PMID:2707640 RGD:2317422 NCBI chr 9:120,760,057...120,776,149
Ensembl chr 9:113,313,452...113,329,536 		JBrowse link
G Ucp2 uncoupling protein 2 IEP RGD PMID:19104935 RGD:7204431 NCBI chr 1:164,251,373...164,257,742
Ensembl chr 1:154,839,209...154,845,611 		JBrowse link
G Vtn vitronectin IDA RGD PMID:10988248 RGD:10003090 NCBI chr10:63,892,782...63,895,862
Ensembl chr10:63,394,719...63,397,810 		JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:12217600 RGD:727737 NCBI chr 4:160,042,900...160,177,757
Ensembl chr 4:158,360,152...158,491,539 		JBrowse link
G Wdr35 WD repeat domain 35 IEP RGD PMID:18472094 RGD:11553927 NCBI chr 6:31,771,315...31,831,450
Ensembl chr 6:31,771,360...31,831,029 		JBrowse link
negative regulation of hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frzb frizzled-related protein acts_upstream_of_or_within ISO
IEA 		(PMID:19562671)
GO_REF:0000107 		RGD
Ensembl		 PMID:19562671 GO_REF:0000107 NCBI chr 3:85,739,162...85,772,168
Ensembl chr 3:65,332,277...65,365,208 		JBrowse link
negative regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A IMP RGD PMID:24190239 RGD:11252157 NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in IMP
ISO
ISS 		PMID:15467833
(PMID:15467833)
GO_REF:0000024 		RGD
UniProt		 PMID:15467833 PMID:15467833 GO_REF:0000024, RGD:11059592 NCBI chr 1:90,171,401...90,187,810
Ensembl chr 1:81,043,595...81,059,992 		JBrowse link
G Cpb2 carboxypeptidase B2 IMP RGD PMID:19386599 RGD:7243112 NCBI chr15:56,967,128...57,015,964
Ensembl chr15:50,557,717...50,606,556 		JBrowse link
G Lims1 LIM zinc finger domain containing 1 acts_upstream_of_or_within ISO MGI:2385067 (PMID:24058607) RGD PMID:24058607 NCBI chr20:26,851,364...26,961,607
Ensembl chr20:26,309,895...26,418,500 		JBrowse link
G Lims2 LIM zinc finger domain containing 2 acts_upstream_of_or_within ISO
IEA 		MGI:1195263 (PMID:24058607)
GO_REF:0000107 		RGD
Ensembl		 PMID:24058607 GO_REF:0000107 NCBI chr18:23,828,164...23,866,363
Ensembl chr18:23,553,937...23,592,137 		JBrowse link
G Smo smoothened, frizzled class receptor IMP RGD PMID:22994359 RGD:150521663 NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
positive regulation of hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IMP RGD PMID:19229878 RGD:8885195 NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Foxa3 forkhead box A3 IMP RGD PMID:9878541 RGD:2315086 NCBI chr 1:78,662,067...78,672,321
Ensembl chr 1:78,662,431...78,672,155 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO
IEA 		(PMID:18593560)
GO_REF:0000107 		RGD
Ensembl		 PMID:18593560 GO_REF:0000107 NCBI chr 1:143,147,671...143,149,189
Ensembl chr 1:133,738,357...133,739,875 		JBrowse link
positive regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD-like apoptosis regulator IMP RGD PMID:16033771 RGD:11341689 NCBI chr 9:67,679,502...67,747,226
Ensembl chr 9:60,185,452...60,237,034 		JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in IDA PMID:16756958 UniProt PMID:16756958 RGD:10047366 NCBI chr18:30,937,670...31,023,786
Ensembl chr18:30,686,581...30,772,357 		JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in IDA PMID:16756958 UniProt PMID:16756958 RGD:10047366 NCBI chr10:18,210,240...18,241,929
Ensembl chr10:17,706,174...17,736,818 		JBrowse link
G Hpn hepsin involved_in ISO
ISS
IEA 		(PMID:15614436)
GO_REF:0000024
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:15614436 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811 		JBrowse link
G Il18 interleukin 18 IDA RGD PMID:24412291 RGD:14696652 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:50,906,960...50,932,887 		JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 IMP RGD PMID:24814243 RGD:13793384 NCBI chr 4:142,743,401...143,066,505
Ensembl chr 4:141,187,418...141,510,491 		JBrowse link
G Mdk midkine involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:15482347) 		UniProt
Ensembl
RGD		 PMID:15482347 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:98,356,789...98,358,960
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO
IEA 		MGI:2176946|MGI:3511276 (PMID:17438330)
GO_REF:0000107 		RGD
Ensembl		 PMID:17438330 GO_REF:0000107 NCBI chr10:83,641,851...83,685,560
Ensembl chr10:83,145,568...83,189,299 		JBrowse link
G Ptn pleiotrophin involved_in IDA
ISO 		(PMID:15482347) RGD PMID:15482347 PMID:16226713 RGD:9834996 NCBI chr 4:66,260,764...66,342,614
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Rtn4 reticulon 4 involved_in ISS
ISO 		GO_REF:0000024
(PMID:23299899) 		UniProt
RGD		 PMID:23299899 GO_REF:0000024 NCBI chr14:107,651,001...107,698,610
Ensembl chr14:103,449,930...103,497,686 		JBrowse link
G Tnf tumor necrosis factor IMP
IDA 		with PCB 126 or TCDD RGD PMID:9111198 PMID:17557910 RGD:14995469, RGD:14995481 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO
IEA 		(PMID:15962316)
GO_REF:0000107 		RGD
Ensembl		 PMID:15962316 GO_REF:0000107 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO
IEA 		(PMID:23740243)
GO_REF:0000107 		RGD
Ensembl		 PMID:23740243 GO_REF:0000107 NCBI chr10:44,533,734...44,577,919
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:10652269)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:10652269 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,604,623...84,609,707
Ensembl chr14:80,390,643...80,395,693 		JBrowse link
regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO
IEA 		(PMID:23740243)
GO_REF:0000107 		RGD
Ensembl		 PMID:23740243 GO_REF:0000107 NCBI chr 7:65,042,237...65,054,888
Ensembl chr 7:63,156,926...63,169,251 		JBrowse link
G Ifng interferon gamma IDA RGD PMID:15799032 RGD:8142374 NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375 		JBrowse link
G Plau plasminogen activator, urokinase IMP RGD PMID:17587687 RGD:6484147 NCBI chr15:3,505,485...3,511,987
Ensembl chr15:3,456,232...3,462,775 		JBrowse link
G Sulf2 sulfatase 2 acts_upstream_of_or_within ISO
IEA 		MGI:3587954 (PMID:23740243)
GO_REF:0000107 		RGD
Ensembl		 PMID:23740243 GO_REF:0000107 NCBI chr 3:154,822,079...154,904,566
Ensembl chr 3:154,822,085...154,904,415 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    multicellular organismal process 9031
      multicellular organism development 5362
        system development 4644
          hepaticobiliary system development 294
            common bile duct development + 7
            gallbladder development 3
            liver development + 291
Path 2
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      anatomical structure development 6656
        multicellular organism development 5362
          system development 4644
            hepaticobiliary system development 294
              common bile duct development + 7
              gallbladder development 3
              liver development + 291
paths to the root