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ONTOLOGY REPORT - ANNOTATIONS

Term:hepaticobiliary system development
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Accession:GO:0061008 term browser browse the term
Definition:The progression of the hepaticobiliary system over time, from its formation to the mature structure. The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins.
Synonyms:exact_synonym: hepatobiliary system development

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common bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor involved_in ISO (MGI:3794480|PMID:16443691) RGD PMID:16443691 MGI:3794480 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2149672 (MGI:4355651|PMID:19619492)		 Ensembl
RGD		 PMID:19619492 GO_REF:0000107 MGI:4355651 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:3721426 (MGI:3720549|PMID:17580084) RGD PMID:17580084 MGI:3720549 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649 		JBrowse link
G Mks1 MKS transition zone complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4410614 (MGI:4367169|PMID:19776033)		 Ensembl
RGD		 PMID:19776033 GO_REF:0000107 MGI:4367169 NCBI chr10:75,149,814...75,160,481
Ensembl chr10:75,149,814...75,160,480 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO (MGI:4421275|PMID:19913509) RGD PMID:19913509 MGI:4421275 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907 		JBrowse link
determination of liver left/right asymmetry term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc39 coiled-coil domain containing 39 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr 2:120,278,605...120,367,829
Ensembl chr 2:120,278,605...120,316,600 		JBrowse link
G Ccdc40 coiled-coil domain containing 40 involved_in ISO (PMID:22693285) RGD PMID:22693285 NCBI chr10:108,055,270...108,393,408
Ensembl chr10:108,340,240...108,372,862 		JBrowse link
G Dnaaf1 dynein, axonemal, assembly factor 1 involved_in ISO
IEA		 (PMID:19944405)
GO_REF:0000107		 RGD
Ensembl		 PMID:19944405 GO_REF:0000107 NCBI chr19:52,217,427...52,245,930
Ensembl chr19:52,217,984...52,245,929 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:20007846) RGD PMID:20007846 NCBI chr 8:112,526,553...112,575,745
Ensembl chr 8:112,526,553...112,575,745 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:21719175) RGD PMID:21719175 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:9354794) RGD PMID:9354794 NCBI chr  X:140,875,191...140,888,344
Ensembl chr  X:140,878,216...140,888,795 		JBrowse link
gall bladder development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:3721426 (MGI:3720549|PMID:17580084) RGD PMID:17580084 MGI:3720549 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649 		JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:19242925) RGD PMID:19242925 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO MGI:2179440 (MGI:4421275|PMID:19913509) RGD PMID:19913509 MGI:4421275 NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907 		JBrowse link
hepatic duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:3721426 (MGI:3720549|PMID:17580084) RGD PMID:17580084 MGI:3720549 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649 		JBrowse link
hepatoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:14,019,723...14,045,781
Ensembl chr20:14,019,723...14,025,068 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:3721426 (MGI:3720549|PMID:17580084) RGD PMID:17580084 MGI:3720549 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649 		JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO MGI:1857856 (MGI:3807614|PMID:18635606) RGD PMID:18635606 MGI:3807614 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902 		JBrowse link
hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in IEP
IBA		 PMID:21873635 RGD
GO_Central		 PMID:11668598, PMID:21873635 RGD:2306909, RGD:13792537 NCBI chr 1:237,893,983...237,910,002
Ensembl chr 1:237,893,966...237,910,012 		JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP RGD PMID:12939595 RGD:4144098 NCBI chr 9:74,113,437...74,236,274
Ensembl chr 9:74,124,016...74,236,274 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:17574236 RGD:2306655 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147 		JBrowse link
G E2f7 E2F transcription factor 7 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5449497|PMID:23064266)		 UniProt
RGD		 PMID:23064266 GO_REF:0000024 MGI:5449497 NCBI chr 7:53,275,659...53,318,261
Ensembl chr 7:53,275,676...53,316,481 		JBrowse link
G E2f8 E2F transcription factor 8 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5449497|PMID:23064266), (MGI:5449498|PMID:23064264)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23064264 PMID:23064266 GO_REF:0000024 GO_REF:0000107 MGI:5449497 MGI:5449498 NCBI chr 1:104,185,436...104,203,683
Ensembl chr 1:104,187,100...104,202,591 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:14,019,723...14,045,781
Ensembl chr20:14,019,723...14,025,068 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:2448661 (MGI:1891782|PMID:11027604) RGD PMID:11027604 MGI:1891782 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649 		JBrowse link
G Hnf1b HNF1 homeobox B IEP RGD PMID:18286537 RGD:2312718 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha involved_in IEP
IEA		 GO_REF:0000002 InterPro PMID:19621519 GO_REF:0000002, RGD:12904750 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003 		JBrowse link
G Itga2 integrin subunit alpha 2 IEP RGD PMID:16458388 RGD:2307397 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961 		JBrowse link
G Krt18 keratin 18 IEP RGD PMID:24340101, PMID:28941653 RGD:27226712, RGD:27226713 NCBI chr 7:143,629,455...143,633,131
Ensembl chr 7:143,629,455...143,633,131 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:171,213,936...171,219,885
Ensembl chr 3:171,213,936...171,219,871 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:34,216,735...34,224,357
Ensembl chr15:34,216,833...34,224,193 		JBrowse link
G Prox1 prospero homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:15232737) RGD PMID:15232737 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 acts_upstream_of_or_within ISO MGI:2176946|MGI:3606185 (MGI:3806427|PMID:18722179) RGD PMID:18722179 MGI:3806427 NCBI chr 1:170,585,160...170,586,428
Ensembl chr 1:170,585,167...170,586,603 		JBrowse link
G Wnt1 Wnt family member 1 IMP RGD PMID:20413689 RGD:2326223 NCBI chr 7:140,464,999...140,469,046
Ensembl chr 7:140,464,999...140,469,046 		JBrowse link
hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpb CCAAT/enhancer binding protein beta involved_in IDA
ISO		 PMID:10635333
(MGI:3778721|PMID:10635333)		 RGD PMID:10635333, PMID:10635333 MGI:3778721, RGD:10047310 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910 		JBrowse link
G Fgl1 fibrinogen-like 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19880967)		 UniProt
RGD		 PMID:19880967 GO_REF:0000024 NCBI chr16:54,153,086...54,188,120
Ensembl chr16:54,153,054...54,188,181 		JBrowse link
G Il6 interleukin 6 involved_in ISS
ISO		 GO_REF:0000024
(MGI:84432|PMID:8910279)		 UniProt
RGD		 PMID:8910279 GO_REF:0000024 MGI:84432 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807 		JBrowse link
G Mki67 marker of proliferation Ki-67 acts_upstream_of_or_within ISO (MGI:5616947|PMID:25446530) RGD PMID:25446530 MGI:5616947 NCBI chr 1:207,993,895...208,020,454
Ensembl chr 1:207,993,895...208,020,454 		JBrowse link
G Notch2 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3617328 (MGI:5616947|PMID:25446530)		 Ensembl
RGD		 PMID:25446530 GO_REF:0000107 MGI:5616947 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IEP RGD PMID:29138817 RGD:15042871 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056 		JBrowse link
G Prox1 prospero homeobox 1 acts_upstream_of_or_within ISO MGI:2386336 (MGI:1860507|PMID:10888866) RGD PMID:10888866 MGI:1860507 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294 		JBrowse link
G Rps6ka1 ribosomal protein S6 kinase A1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3778721|PMID:10635333)		 UniProt
RGD		 PMID:10635333 GO_REF:0000024 MGI:3778721 NCBI chr 5:152,078,217...152,122,684
Ensembl chr 5:152,078,220...152,122,684 		JBrowse link
G Tgfa transforming growth factor alpha involved_in IDA
ISO		 PMID:10635333
(MGI:3778721|PMID:10635333)		 RGD PMID:10635333, PMID:10635333 MGI:3778721, RGD:10047310 NCBI chr 4:117,961,877...118,045,923
Ensembl chr 4:117,962,319...118,046,344 		JBrowse link
intrahepatic bile duct development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gak cyclin G associated kinase acts_upstream_of_or_within ISO MGI:2176228|MGI:5305733 (MGI:5305417|PMID:18434600) RGD PMID:18434600 MGI:5305417 NCBI chr14:2,100,104...2,174,332
Ensembl chr14:2,100,106...2,174,318 		JBrowse link
G Notch2 notch receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3617328 (MGI:5616947|PMID:25446530)		 Ensembl
RGD		 PMID:25446530 GO_REF:0000107 MGI:5616947 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2177602|MGI:2385468 (MGI:3852603|PMID:19403103) RGD PMID:19403103 MGI:3852603 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379 		JBrowse link
liver development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aacs acetoacetyl-CoA synthetase IDA RGD PMID:10513626 RGD:2301023 NCBI chr12:36,512,393...36,555,694
Ensembl chr12:36,512,393...36,555,694 		JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3692446 (MGI:3692159|PMID:16121256)		 Ensembl
RGD		 PMID:16121256 GO_REF:0000107 MGI:3692159 NCBI chr 2:260,124,418...260,148,589
Ensembl chr 2:260,124,418...260,148,589 		JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 IEP RGD PMID:5166591 RGD:2326169 NCBI chr 8:58,166,990...58,195,884
Ensembl chr 8:58,166,990...58,195,884 		JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 IEP RGD PMID:5166591 RGD:2326169 NCBI chr 1:47,972,399...47,992,654
Ensembl chr 1:47,972,399...47,992,653 		JBrowse link
G Aco1 aconitase 1 IEP RGD PMID:755797 RGD:11552585 NCBI chr 5:56,425,076...56,481,218
Ensembl chr 5:56,425,024...56,481,218 		JBrowse link
G Aco2 aconitase 2 IEP RGD PMID:755797 RGD:11552585 NCBI chr 7:123,102,493...123,145,608
Ensembl chr 7:123,102,468...123,145,635 		JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO MGI:1857117|MGI:2155977 (MGI:72798|PMID:7731963), (MGI:74163|PMID:7670465) RGD PMID:7670465 PMID:7731963 MGI:72798 MGI:74163 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947 		JBrowse link
G Adrb2 adrenoceptor beta 2 IEP RGD PMID:8408243 RGD:8548535 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834 		JBrowse link
G Afp alpha-fetoprotein IEP RGD PMID:16822301 RGD:2292045 NCBI chr14:19,141,755...19,159,919
Ensembl chr14:19,141,755...19,159,923 		JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (MGI:1889403|PMID:10973493), (MGI:3794480|PMID:16443691), (MGI:72762|PMID:7732381), (MGI:81320|PMID:8692887) RGD PMID:7732381 PMID:8692887 PMID:10973493 PMID:16443691 MGI:1889403 MGI:3794480 MGI:72762 MGI:81320 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464 		JBrowse link
G Ak2 adenylate kinase 2 IEP RGD PMID:5123889 RGD:5490208 NCBI chr 5:147,185,474...147,204,050
Ensembl chr 5:147,185,474...147,204,050 		JBrowse link
G Ak3 adenylate kinase 3 IEP RGD PMID:5123889 RGD:5490208 NCBI chr 1:247,144,486...247,169,690
Ensembl chr 1:247,144,491...247,169,693 		JBrowse link
G Ak4 adenylate kinase 4 IEP RGD PMID:9813319 RGD:632174 NCBI chr 5:120,250,318...120,309,153
Ensembl chr 5:120,250,616...120,305,897 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 IEP RGD PMID:14729401 RGD:1643117 NCBI chr 1:238,222,689...238,264,381
Ensembl chr 1:238,222,521...238,264,330 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 IEP RGD PMID:14729401 RGD:1643117 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489 		JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member IEP RGD PMID:16291827 RGD:2300311 NCBI chr12:40,466,418...40,498,813
Ensembl chr12:40,466,495...40,498,752 		JBrowse link
G Aldh9a1 aldehyde dehydrogenase 9 family, member A1 IEP RGD PMID:19150623 RGD:2313411 NCBI chr13:85,580,828...85,597,497
Ensembl chr13:85,580,828...85,597,493 		JBrowse link
G Aldob aldolase, fructose-bisphosphate B IEP RGD PMID:8641049 RGD:2313428 NCBI chr 5:64,805,772...64,818,813
Ensembl chr 5:64,805,773...64,818,824 		JBrowse link
G Ang angiogenin IEP RGD PMID:2440105 RGD:2325721 NCBI chr15:28,022,926...28,028,636 JBrowse link
G Arf6 ADP-ribosylation factor 6 acts_upstream_of_or_within ISO MGI:3662650 (MGI:3653957|PMID:16880525) RGD PMID:16880525 MGI:3653957 NCBI chr 6:91,697,109...91,698,257
Ensembl chr 6:91,697,109...91,698,255 		JBrowse link
G Arg1 arginase 1 IEP RGD PMID:8690412 RGD:4144072 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863 		JBrowse link
G Asl argininosuccinate lyase IEP
IDA		 DNA:increased methylation:5' utr RGD PMID:10473900, PMID:9535537 RGD:1599266, RGD:1599268 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341 		JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) IEP RGD PMID:237754 RGD:2316008 NCBI chr 4:33,742,876...33,761,106
Ensembl chr 4:33,743,364...33,761,163 		JBrowse link
G Ass1 argininosuccinate synthase 1 IEP RGD PMID:10473900, PMID:9395312 RGD:1599266, RGD:4139912 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2176073|MGI:3587769 (MGI:3587473|PMID:15866887) RGD PMID:15866887 MGI:3587473 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta IEP RGD PMID:8420961 RGD:13792579 NCBI chr 7:2,504,708...2,511,748
Ensembl chr 7:2,504,695...2,511,749 		JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:25349135 RGD:11341669 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644 		JBrowse link
G Baat bile acid CoA:amino acid N-acyltransferase IEP RGD PMID:7575455 RGD:69770 NCBI chr 5:64,768,397...64,777,368
Ensembl chr 5:64,768,401...64,777,368 		JBrowse link
G Bdh1 3-hydroxybutyrate dehydrogenase 1 IEP RGD PMID:2806552 RGD:4105456 NCBI chr11:72,577,547...72,619,435
Ensembl chr11:72,578,533...72,614,176 		JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase IEP RGD PMID:14160653 RGD:2303538 NCBI chr 6:26,657,507...26,680,459
Ensembl chr 6:26,657,780...26,680,284 		JBrowse link
G Cadm1 cell adhesion molecule 1 IMP RGD PMID:17326163 RGD:2289097 NCBI chr 8:51,858,906...52,200,591
Ensembl chr 8:52,127,399...52,189,722 		JBrowse link
G Cast calpastatin IEP RGD PMID:16871587 RGD:5683869 NCBI chr 2:1,452,111...1,561,669
Ensembl chr 2:1,452,116...1,561,464 		JBrowse link
G Ccnd1 cyclin D1 IEP RGD PMID:15809057 RGD:1582338 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325 		JBrowse link
G Ccnd2 cyclin D2 IEP RGD PMID:15809057 RGD:1582338 NCBI chr 4:159,674,885...159,697,207
Ensembl chr 4:159,674,885...159,697,207 		JBrowse link
G Ccne1 cyclin E1 IEP RGD PMID:15809057 RGD:1582338 NCBI chr 1:94,485,830...94,495,112
Ensembl chr 1:94,485,832...94,494,980 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:6284072|PMID:30635284)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:30635284 GO_REF:0000024 GO_REF:0000107 MGI:6284072 NCBI chr10:84,780,644...84,789,800
Ensembl chr10:84,780,608...84,789,832 		JBrowse link
G Cdkn2b cyclin-dependent kinase inhibitor 2B IEP RGD PMID:11042273 RGD:7248763 NCBI chr 5:107,834,353...107,857,428
Ensembl chr 5:107,845,951...107,858,104 		JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha acts_upstream_of_or_within
involved_in		 IEP
ISO
ISS
IEA		 MGI:2177068 (MGI:3688957|PMID:17021047)
(MGI:83240|PMID:8798745)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:8798745 PMID:17021047, PMID:16172914 GO_REF:0000024 GO_REF:0000107 MGI:3688957 MGI:83240, RGD:1625368 NCBI chr 1:91,363,492...91,366,164
Ensembl chr 1:91,363,492...91,366,164 		JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IEP RGD PMID:1377818 RGD:69946 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910 		JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma involved_in IEP PMID:1377818 UniProt PMID:1377818 RGD:69946 NCBI chr 1:91,286,956...91,297,459
Ensembl chr 1:91,287,917...91,296,656 		JBrowse link
G Cfc1 cripto, FRL-1, cryptic family 1 acts_upstream_of_or_within ISO MGI:2179530 (MGI:1346729|PMID:10521397) RGD PMID:10521397 MGI:1346729 NCBI chr 9:41,045,352...41,051,979
Ensembl chr 9:41,045,363...41,052,024 		JBrowse link
G Chek1_v2 checkpoint kinase 1, variant 2 IEP RGD PMID:11687578 RGD:70230
G Cit citron rho-interacting serine/threonine kinase IEP RGD PMID:12411428 RGD:628497 NCBI chr12:46,334,669...46,494,152
Ensembl chr12:46,334,665...46,494,174 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within
involved_in		 ISO MGI:2385355 (MGI:3847632|PMID:17644732)
(MGI:3813432|PMID:17932483)		 RGD PMID:17644732 PMID:17932483 MGI:3813432 MGI:3847632 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786 		JBrowse link
G Cobl cordon-bleu WH2 repeat protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:7586755)		 Ensembl
RGD		 PMID:7586755 GO_REF:0000107 NCBI chr14:92,341,949...92,497,169
Ensembl chr14:92,342,957...92,577,936 		JBrowse link
G Cp ceruloplasmin IEP RGD PMID:2332446 RGD:728241 NCBI chr 2:104,744,249...104,803,034
Ensembl chr 2:104,744,461...104,799,853 		JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP RGD PMID:8690412 RGD:4144072 NCBI chr 9:74,113,437...74,236,274
Ensembl chr 9:74,124,016...74,236,274 		JBrowse link
G Ctnnb1 catenin beta 1 IEP RGD PMID:17236583 RGD:1599633 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IEP RGD PMID:12162855 RGD:727721 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147 		JBrowse link
G Cyp2d3 cytochrome P450, family 2, subfamily d, polypeptide 3 IEP RGD PMID:9929501 RGD:2301678 NCBI chr 7:123,634,400...123,638,757
Ensembl chr 7:123,625,590...123,638,765 		JBrowse link
G Dbp D-box binding PAR bZIP transcription factor IEP RGD PMID:2331750 RGD:727680 NCBI chr 1:101,687,896...101,692,845
Ensembl chr 1:101,687,855...101,692,846 		JBrowse link
G Ddx39b DExD-box helicase 39B IEP RGD PMID:1618789 RGD:632224 NCBI chr20:4,806,103...4,818,600
Ensembl chr20:4,806,108...4,818,568 		JBrowse link
G Dut deoxyuridine triphosphatase IEP RGD PMID:11121581 RGD:5133681 NCBI chr 3:117,514,399...117,525,450
Ensembl chr 3:117,514,444...117,525,446 		JBrowse link
G Egfr epidermal growth factor receptor IEP RGD PMID:12454858 RGD:2289959 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796 		JBrowse link
G Elk1 ETS transcription factor ELK1 acts_upstream_of_or_within ISO (MGI:6472092|PMID:31877385) RGD PMID:31877385 MGI:6472092 NCBI chr  X:1,287,875...1,304,822
Ensembl chr  X:1,297,099...1,304,822 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:10231554 RGD:13204733 NCBI chr 1:21,748,201...21,813,205
Ensembl chr 1:21,748,261...21,813,371 		JBrowse link
G Ephx1 epoxide hydrolase 1 IEP RGD PMID:2469391 RGD:4889418 NCBI chr13:99,271,390...99,300,580
Ensembl chr13:99,271,366...99,300,579 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IEP RGD PMID:12454858 RGD:2289959 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728 		JBrowse link
G Foxm1 forkhead box M1 acts_upstream_of_or_within ISO MGI:3522201 (MGI:3522012|PMID:15531365) RGD PMID:15531365 MGI:3522012 NCBI chr 4:161,685,236...161,697,633
Ensembl chr 4:161,685,258...161,696,305 		JBrowse link
G Fpgs folylpolyglutamate synthase IEP RGD PMID:1435744 RGD:2315102 NCBI chr 3:11,717,667...11,729,694
Ensembl chr 3:11,717,667...11,723,327 		JBrowse link
G Fscn1 fascin actin-bundling protein 1 IEP RGD PMID:18855019 RGD:2317768 NCBI chr12:13,655,459...13,668,595
Ensembl chr12:13,656,554...13,668,515 		JBrowse link
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3576383 (MGI:3575862|PMID:15767668)		 Ensembl
RGD		 PMID:15767668 GO_REF:0000107 MGI:3575862 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:14,059,347...14,061,703
Ensembl chr10:14,059,347...14,061,703 		JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 IEP RGD PMID:3996734 RGD:2302171 NCBI chr15:19,721,292...19,734,032
Ensembl chr15:19,721,293...19,733,967 		JBrowse link
G H19 H19, imprinted maternally expressed transcript (non-protein coding) IEP RGD PMID:8981228 RGD:1342456 NCBI chr 1:215,744,404...215,747,080 JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2149672 (MGI:3525024|PMID:15578515)		 Ensembl
RGD		 PMID:15578515 GO_REF:0000107 MGI:3525024 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248 		JBrowse link
G Hgf hepatocyte growth factor acts_upstream_of_or_within ISO (MGI:3653957|PMID:16880525) RGD PMID:16880525 MGI:3653957 NCBI chr 4:15,435,460...15,505,377
Ensembl chr 4:15,433,295...15,505,362 		JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:2177762|MGI:2448661|MGI:2449914 (MGI:1855906|PMID:10804184), (MGI:1891782|PMID:11027604), (MGI:3487182|PMID:15459110), (MGI:3703395|PMID:16364283) RGD PMID:10804184 PMID:11027604 PMID:15459110 PMID:16364283 MGI:1855906 MGI:1891782 MGI:3487182 MGI:3703395 NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649 		JBrowse link
G Hlx H2.0-like homeobox acts_upstream_of_or_within ISO MGI:2182089 (MGI:79044|PMID:8557196) RGD PMID:8557196 MGI:79044 NCBI chr13:102,637,967...102,643,376
Ensembl chr13:102,637,769...102,643,223 		JBrowse link
G Hmbs hydroxymethylbilane synthase IDA RGD PMID:971328 RGD:25394583 NCBI chr 8:48,667,278...48,674,673
Ensembl chr 8:48,667,275...48,674,748 		JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase IEP RGD PMID:13990 RGD:2326149 NCBI chr 5:154,294,841...154,308,582
Ensembl chr 5:154,294,806...154,308,640 		JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 IEP RGD PMID:5166591 RGD:2326169 NCBI chr 2:52,427,351...52,445,082
Ensembl chr 2:52,431,601...52,445,055 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:8620869 RGD:2326125 NCBI chr 2:200,452,623...200,480,785
Ensembl chr 2:200,452,624...200,479,423 		JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384429 (MGI:1202489|PMID:9566924) RGD PMID:9566924 MGI:1202489 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342 		JBrowse link
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000002
MGI:1857856 (MGI:3807614|PMID:18635606)		 InterPro
RGD		 PMID:18635606 GO_REF:0000002 MGI:3807614 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IEP RGD PMID:20102719 RGD:10042969 NCBI chr14:11,256,163...11,274,684
Ensembl chr14:11,256,268...11,274,578 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP RGD PMID:16488668 RGD:10002779 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654 		JBrowse link
G Hp haptoglobin IDA RGD PMID:16172914 RGD:1625368 NCBI chr19:42,096,255...42,100,805
Ensembl chr19:42,097,995...42,100,804 		JBrowse link
G Hras HRas proto-oncogene, GTPase IEP RGD PMID:2581126 RGD:14694813 NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686 		JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase acts_upstream_of_or_within ISO MGI:2183607 (MGI:2182507|PMID:12105862) RGD PMID:12105862 MGI:2182507 NCBI chr 5:169,475,270...169,482,031
Ensembl chr 5:169,475,270...169,482,030 		JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527 (MGI:2155922|PMID:11773599), (MGI:892192|PMID:9176412) RGD PMID:9176412 PMID:11773599 MGI:2155922 MGI:892192 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924 		JBrowse link
G Igf2r insulin-like growth factor 2 receptor IDA RGD PMID:12127995 RGD:2311626 NCBI chr 1:48,176,095...48,264,482
Ensembl chr 1:48,176,106...48,264,477 		JBrowse link
G Insr insulin receptor IEP RGD PMID:6364984 RGD:14701029 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414 		JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 acts_upstream_of_or_within ISO MGI:1856923 (MGI:1096257|PMID:9376320) RGD PMID:9376320 MGI:1096257 NCBI chr17:20,183,440...20,365,219
Ensembl chr17:20,184,245...20,364,714 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2149630 (MGI:1338596|PMID:10352021) RGD PMID:10352021 MGI:1338596 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277 		JBrowse link
G Klf1 Kruppel like factor 1 acts_upstream_of_or_within ISO MGI:1857557 (MGI:73364|PMID:7753194) RGD PMID:7753194 MGI:73364 NCBI chr19:26,016,289...26,019,557
Ensembl chr19:26,016,382...26,019,553 		JBrowse link
G Kras KRAS proto-oncogene, GTPase IEP RGD PMID:1526114 RGD:11060153 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558 		JBrowse link
G Lbp lipopolysaccharide binding protein IEP RGD PMID:20978830 RGD:9685195 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464 		JBrowse link
G Lipc lipase C, hepatic type IEP RGD PMID:11004003 RGD:2307448 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248 		JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in ISS
ISO		 GO_REF:0000024
(MGI:3052428|PMID:15265030)		 HGNC
RGD		 PMID:15265030 GO_REF:0000024 MGI:3052428 NCBI chr 1:89,383,515...89,399,041
Ensembl chr 1:89,383,519...89,399,041 		JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 acts_upstream_of_or_within ISO MGI:2150656 (MGI:3652665|PMID:16754854) RGD PMID:16754854 MGI:3652665 NCBI chr 9:112,293,388...112,451,677
Ensembl chr 9:112,293,388...112,451,677 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:2684189 (MGI:2682174|PMID:14500757) RGD PMID:14500757 MGI:2682174 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880 		JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within
involved_in		 IEP
ISO
IBA		 MGI:1857655 (MGI:76093|PMID:7651534)
PMID:21873635		 RGD PMID:7651534, PMID:8506951, PMID:21873635 MGI:76093, RGD:2317549, RGD:13792537 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665 		JBrowse link
G Mpst mercaptopyruvate sulfurtransferase IDA RGD PMID:6573924 RGD:9685558 NCBI chr 7:119,626,636...119,631,317
Ensembl chr 7:119,626,637...119,631,425 		JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within ISO MGI:3587937 (MGI:3695837|PMID:17183527) RGD PMID:17183527 MGI:3695837 NCBI chr10:1,151,163...1,273,269 JBrowse link
G Nat1 N-acetyltransferase 1 IEP RGD PMID:18799802 RGD:2303764 NCBI chr16:23,970,742...23,991,573
Ensembl chr16:23,970,743...23,991,573 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:1857444 (MGI:66069|PMID:7926784)
GO_REF:0000024		 Ensembl
RGD
HGNC-UCL		 PMID:7926784 GO_REF:0000024 GO_REF:0000107 MGI:66069 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732 (MGI:2155575|PMID:11311163) RGD PMID:11311163 MGI:2155575 NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096 		JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:3045664|PMID:15226394) RGD PMID:15226394 MGI:3045664 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025 		JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO MGI:3617328 (MGI:5616947|PMID:25446530) RGD PMID:25446530 MGI:5616947 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215 		JBrowse link
G Nts neurotensin IEP RGD PMID:8342998 RGD:9743870 NCBI chr 7:44,111,594...44,120,998
Ensembl chr 7:44,111,151...44,121,130 		JBrowse link
G Onecut1 one cut homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1891408 (MGI:3763866|PMID:17936262)		 Ensembl
RGD		 PMID:17936262 GO_REF:0000107 MGI:3763866 NCBI chr 8:81,765,779...81,799,894
Ensembl chr 8:81,766,041...81,793,577 		JBrowse link
G Onecut2 one cut homeobox 2 acts_upstream_of_or_within ISO MGI:1196423 (MGI:3763866|PMID:17936262) RGD PMID:17936262 MGI:3763866 NCBI chr18:59,830,375...59,882,490
Ensembl chr18:59,830,363...59,875,127 		JBrowse link
G Otc ornithine transcarbamylase IEP RGD PMID:8690412 RGD:4144072 NCBI chr  X:13,524,804...13,601,074
Ensembl chr  X:13,524,607...13,601,069 		JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in
acts_upstream_of_or_within		 IEP
ISO		 PMID:12552133
(PMID:12552133)		 RGD PMID:12552133, PMID:12552133 RGD:629554 NCBI chr 5:126,031,368...126,053,726
Ensembl chr 5:126,031,368...126,053,726 		JBrowse link
G Pdx1 pancreatic and duodenal homeobox 1 acts_upstream_of_or_within ISO MGI:2388676 (MGI:4355651|PMID:19619492) RGD PMID:19619492 MGI:4355651 NCBI chr12:9,496,044...9,501,211
Ensembl chr12:9,496,044...9,501,213 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha acts_upstream_of_or_within ISO MGI:4845856 (MGI:5582991|PMID:24691033) RGD PMID:24691033 MGI:5582991 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO MGI:1099818 (MGI:5441703|PMID:21685914) RGD PMID:21685914 MGI:5441703 NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in
acts_upstream_of_or_within		 ISO (PMID:11891195)
MGI:97603 (MGI:5441703|PMID:21685914)		 RGD PMID:11891195 PMID:21685914 MGI:5441703 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257 		JBrowse link
G Pkm pyruvate kinase M1/2 IDA RGD PMID:7327170 RGD:2303137 NCBI chr 8:64,480,963...64,502,957
Ensembl chr 8:64,481,172...64,502,722 		JBrowse link
G Prkcsh protein kinase C substrate 80K-H involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:2155302 (MGI:5441703|PMID:21685914)		 RGD PMID:21685914, PMID:21873635 MGI:5441703, RGD:13792537 NCBI chr 8:23,014,802...23,026,507
Ensembl chr 8:23,014,956...23,026,503 		JBrowse link
G Proc protein C, inactivator of coagulation factors Va and VIIIa acts_upstream_of_or_within IEP
ISO		 MGI:2183063 (MGI:1306904|PMID:9788960) RGD PMID:9788960, PMID:7660357 MGI:1306904, RGD:1299299 NCBI chr18:24,918,402...24,928,822
Ensembl chr18:24,918,398...24,929,091 		JBrowse link
G Pros1 protein S IEP RGD PMID:7660357 RGD:1299299 NCBI chr 7:1,206,648...1,288,140
Ensembl chr 7:1,206,648...1,288,134 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IEP
ISO		 (PMID:11789987) RGD PMID:11789987, PMID:16770575 RGD:5133274 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294 		JBrowse link
G Psmb9 proteasome 20S subunit beta 9 IEP RGD PMID:24707720 RGD:9854625 NCBI chr20:3,973,424...3,978,845
Ensembl chr20:3,973,420...3,978,845 		JBrowse link
G Ptcd2 pentatricopeptide repeat domain 2 acts_upstream_of_or_within ISO MGI:3830811 (MGI:3829520|PMID:18729827) RGD PMID:18729827 MGI:3829520 NCBI chr 2:29,570,581...29,598,328
Ensembl chr 2:29,570,538...29,598,277 		JBrowse link
G Ptn pleiotrophin IEP RGD PMID:12057922 RGD:727382 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996 		JBrowse link
G Qdpr quinoid dihydropteridine reductase IEP RGD PMID:710385 RGD:5128606 NCBI chr14:70,164,682...70,178,284
Ensembl chr14:70,164,650...70,178,284 		JBrowse link
G Rara retinoic acid receptor, alpha IEP RGD PMID:15388488 RGD:2314298 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210 		JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 acts_upstream_of_or_within ISO MGI:3690329 (MGI:3689241|PMID:17015619) RGD PMID:17015619 MGI:3689241 NCBI chr 5:13,033,918...13,097,369
Ensembl chr 5:13,033,918...13,097,341 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (MGI:76008|PMID:7603567) RGD PMID:7603567 MGI:76008 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249 		JBrowse link
G Rgn regucalcin IEP RGD PMID:9546611, PMID:8794449 RGD:9590173, RGD:9590212 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904 		JBrowse link
G Rhbdd3 rhomboid domain containing 3 acts_upstream_of_or_within ISO MGI:5516031 (MGI:5492204|PMID:23610400) RGD PMID:23610400 MGI:5492204 NCBI chr14:85,350,852...85,357,029
Ensembl chr14:85,351,358...85,357,023 		JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (MGI:3716248|PMID:17558409) RGD PMID:17558409 MGI:3716248 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055 		JBrowse link
G Runx1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO MGI:3043614 (MGI:3759935|PMID:16174759) RGD PMID:16174759 MGI:3759935 NCBI chr11:32,765,147...33,003,061
Ensembl chr11:32,769,165...33,003,021 		JBrowse link
G Rxra retinoid X receptor alpha IEP RGD PMID:14729401 RGD:1643117 NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908 		JBrowse link
G Sec63 SEC63 homolog, protein translocation regulator acts_upstream_of_or_within ISO MGI:107877|MGI:5442171 (MGI:5441703|PMID:21685914) RGD PMID:21685914 MGI:5441703 NCBI chr20:47,494,270...47,563,222
Ensembl chr20:47,494,270...47,563,222 		JBrowse link
G Slc25a4 solute carrier family 25 member 4 IEP RGD PMID:9468308 RGD:9681468 NCBI chr16:49,266,903...49,270,698
Ensembl chr16:49,266,903...49,270,698 		JBrowse link
G Slco1b2 solute carrier organic anion transporter family member 1B2 IEP RGD PMID:15288467 RGD:2303131 NCBI chr 4:175,814,118...175,881,775
Ensembl chr 4:175,814,118...175,881,768 		JBrowse link
G Slco2b1 solute carrier organic anion transporter family, member 2b1 IEP RGD PMID:15345472 RGD:2316987 NCBI chr 1:164,623,313...164,671,612
Ensembl chr 1:164,623,599...164,671,577 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (MGI:3618021|PMID:15183723) RGD PMID:15183723 MGI:3618021 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2386105|MGI:3611933 (MGI:3610843|PMID:16287714) RGD PMID:16287714 MGI:3610843 NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468 		JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO MGI:2177602|MGI:2447406 (MGI:3718142|PMID:17367743) RGD PMID:17367743 MGI:3718142 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 3:59,644,579...59,689,011
Ensembl chr 3:59,646,015...59,688,692 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP RGD PMID:8770891 RGD:4892048 NCBI chr 1:36,320,504...36,354,694
Ensembl chr 1:36,320,461...36,354,756 		JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IEP RGD PMID:9199345 RGD:11039429 NCBI chr 6:104,611,026...104,640,033
Ensembl chr 6:104,611,026...104,615,302 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B IDA RGD PMID:17565389 RGD:2291935 NCBI chr10:88,686,207...88,712,313
Ensembl chr10:88,686,207...88,754,829 		JBrowse link
G Taf10 TATA-box binding protein associated factor 10 acts_upstream_of_or_within ISO MGI:2176946|MGI:3606185 (MGI:3806427|PMID:18722179) RGD PMID:18722179 MGI:3806427 NCBI chr 1:170,585,160...170,586,428
Ensembl chr 1:170,585,167...170,586,603 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (MGI:2663364|PMID:12773577) RGD PMID:12773577 MGI:2663364 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545 		JBrowse link
G Thra thyroid hormone receptor alpha IEP RGD PMID:17496154 RGD:2314319 NCBI chr10:86,657,285...86,684,935
Ensembl chr10:86,657,285...86,684,933 		JBrowse link
G Thra_v1 thyroid hormone receptor alpha, variant 1 IEP RGD PMID:17496154 RGD:2314319
G Thra_v2 thyroid hormone receptor alpha, variant 2 IEP RGD PMID:17496154 RGD:2314319
G Tk1 thymidine kinase 1 IEP RGD PMID:995499 RGD:2317236 NCBI chr10:106,817,556...106,828,888
Ensembl chr10:106,817,601...106,828,884 		JBrowse link
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 IEP RGD PMID:16310220, PMID:18938141 RGD:2315453, RGD:2317023 NCBI chr 9:95,295,701...95,302,822
Ensembl chr 9:95,161,157...95,302,822 		JBrowse link
G Ugt1a2 UDP glucuronosyltransferase 1 family, polypeptide A2 IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:95,285,592...95,302,822
Ensembl chr 9:95,161,157...95,302,822 		JBrowse link
G Ugt1a5 UDP glucuronosyltransferase family 1 member A5 IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:95,256,628...95,302,822
Ensembl chr 9:95,161,157...95,302,822 		JBrowse link
G Ugt1a6 UDP glucuronosyltransferase family 1 member A6 IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:95,241,609...95,302,822
Ensembl chr 9:95,161,157...95,302,822 		JBrowse link
G Ugt1a7c UDP glucuronosyltransferase 1 family, polypeptide A7C IEP RGD PMID:18938141 RGD:2317023 NCBI chr 9:95,233,957...95,302,822
Ensembl chr 9:95,161,157...95,302,822 		JBrowse link
G Upb1 beta-ureidopropionase 1 IDA RGD PMID:6870258 RGD:2317093 NCBI chr20:14,167,383...14,193,724
Ensembl chr20:14,167,586...14,193,690 		JBrowse link
G Upf2 UPF2, regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO MGI:3790198 (MGI:4821037|PMID:20657840) RGD PMID:20657840 MGI:4821037 NCBI chr17:76,176,379...76,287,246
Ensembl chr17:76,175,643...76,287,186 		JBrowse link
G Urod uroporphyrinogen decarboxylase IEP RGD PMID:6219675 RGD:4145103 NCBI chr 5:135,855,429...135,859,515
Ensembl chr 5:135,855,433...135,859,643 		JBrowse link
G Vwf von Willebrand factor acts_upstream_of_or_within ISO MGI:1857656 (MGI:70957|PMID:7854452) RGD PMID:7854452 MGI:70957 NCBI chr 4:158,085,059...158,219,525
Ensembl chr 4:158,088,505...158,219,523 		JBrowse link
G Wnt4 Wnt family member 4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15312687)		 Ensembl
RGD		 PMID:15312687 GO_REF:0000107 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:1352298|PMID:10652269)		 UniProt
RGD		 PMID:10652269 GO_REF:0000024 MGI:1352298 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (MGI:5609934|PMID:23117660) RGD PMID:23117660 MGI:5609934 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541 		JBrowse link
liver morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3714267 (MGI:3713609|PMID:17339333)		 Ensembl
RGD		 PMID:17339333 GO_REF:0000107 MGI:3713609 NCBI chr 9:86,044,485...86,129,066
Ensembl chr 9:86,044,485...86,129,329 		JBrowse link
G Notch2 notch receptor 2 acts_upstream_of_or_within ISO MGI:3617328 (MGI:5616947|PMID:25446530) RGD PMID:25446530 MGI:5616947 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within ISO MGI:5301343 (MGI:5298314|PMID:21803851) RGD PMID:21803851 MGI:5298314 NCBI chr 2:238,719,389...238,802,975
Ensembl chr 2:238,720,835...238,803,024 		JBrowse link
liver regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 IEP RGD PMID:8855951 RGD:8548508 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834 		JBrowse link
G Alas2 5'-aminolevulinate synthase 2 IEP RGD PMID:6895999 RGD:11035238 NCBI chr  X:23,167,576...23,187,356
Ensembl chr  X:23,167,696...23,187,341 		JBrowse link
G Angpt1 angiopoietin 1 IEP RGD PMID:11549276 RGD:704403 NCBI chr 7:81,338,327...81,592,459
Ensembl chr 7:81,342,280...81,592,206 		JBrowse link
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 IEP RGD PMID:11032760 RGD:13782137 NCBI chr10:59,528,849...59,560,440
Ensembl chr10:59,529,785...59,560,433 		JBrowse link
G Aurka aurora kinase A involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:170,364,177...170,380,278
Ensembl chr 3:170,364,181...170,378,210 		JBrowse link
G Bcl2 BCL2, apoptosis regulator IEP RGD PMID:21503946 RGD:11531107 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374 		JBrowse link
G Ccnd1 cyclin D1 acts_upstream_of_or_within ISO (MGI:5515698|PMID:23740243) RGD PMID:23740243 MGI:5515698 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325 		JBrowse link
G Cebpb CCAAT/enhancer binding protein beta involved_in ISS
ISO		 GO_REF:0000024
(MGI:1277818|PMID:9727068)		 UniProt
RGD		 PMID:9727068 GO_REF:0000024 MGI:1277818 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910 		JBrowse link
G Cftr CF transmembrane conductance regulator IEP RGD PMID:1378998 RGD:11567227 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676 		JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:15826721 RGD:11344894 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416 		JBrowse link
G Cpb2 carboxypeptidase B2 IEP RGD PMID:19386599 RGD:7243112 NCBI chr15:57,290,849...57,339,762
Ensembl chr15:57,290,849...57,339,760 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IEP RGD PMID:31953200 RGD:25823179 NCBI chr 1:218,568,157...218,629,679
Ensembl chr 1:218,569,510...218,629,678 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 IEP RGD PMID:8573159 RGD:11565141 NCBI chr 3:147,713,808...147,760,375
Ensembl chr 3:147,713,821...147,757,862 		JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 IEP RGD PMID:8573159 RGD:11565141 NCBI chr19:9,972,537...10,012,043
Ensembl chr19:9,972,537...10,012,043 		JBrowse link
G Csnk2b casein kinase 2 beta IEP RGD PMID:8573159 RGD:11565141 NCBI chr20:5,108,692...5,113,675
Ensembl chr20:5,106,890...5,113,112 		JBrowse link
G Egfr epidermal growth factor receptor IEP
IMP		 RGD PMID:2401457, PMID:20395437 RGD:10395295, RGD:38599218 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:107940 (MGI:5637451|PMID:25477280) RGD PMID:25477280 MGI:5637451 NCBI chr10:89,104,026...89,139,978
Ensembl chr10:89,104,027...89,130,339 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:1097695 (MGI:5637451|PMID:25477280) RGD PMID:25477280 MGI:5637451 NCBI chr 4:77,284,404...77,347,011
Ensembl chr 4:77,284,404...77,347,011 		JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:10632538 RGD:8662889 NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790 		JBrowse link
G Fga fibrinogen alpha chain IEP RGD PMID:3817019 RGD:728788 NCBI chr 2:181,997,562...182,013,726
Ensembl chr 2:182,006,242...182,013,763 		JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 IEP RGD PMID:16162160 RGD:10402121 NCBI chr12:9,033,993...9,205,886
Ensembl chr12:9,034,308...9,205,905 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration IMP RGD PMID:24880092 RGD:9685725 NCBI chr10:14,059,347...14,061,703
Ensembl chr10:14,059,347...14,061,703 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:14,019,723...14,045,781
Ensembl chr20:14,019,723...14,025,068 		JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within IEP
ISO		 MGI:1857797 (MGI:5515698|PMID:23740243) RGD PMID:23740243, PMID:22790641, PMID:22024090 MGI:5515698, RGD:12832760, RGD:12911223 NCBI chr 7:70,620,794...70,633,171
Ensembl chr 7:70,620,766...70,630,338 		JBrowse link
G Gli3 GLI family zinc finger 3 IEP RGD PMID:22024090 RGD:12911223 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036 		JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:22364558 RGD:8694419 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960 		JBrowse link
G Hfe homeostatic iron regulator IEP RGD PMID:22364558 RGD:8694419 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985 		JBrowse link
G Hmox1 heme oxygenase 1 IMP RGD PMID:24815159 RGD:10755743 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456 		JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 IEP RGD PMID:16081591 RGD:1599972 NCBI chr 1:199,248,084...199,251,745
Ensembl chr 1:199,248,470...199,251,740 		JBrowse link
G Ihh Indian hedgehog signaling molecule IEP RGD PMID:22024090 RGD:12911223 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440 		JBrowse link
G Il10 interleukin 10 IEP RGD PMID:11813605 RGD:11049526 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392 		JBrowse link
G Il18 interleukin 18 IEP RGD PMID:24412291 RGD:14696652 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299 		JBrowse link
G Il6 interleukin 6 involved_in ISS
ISO		 GO_REF:0000024
(MGI:84432|PMID:8910279)		 UniProt
RGD		 PMID:8910279 GO_REF:0000024 MGI:84432 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807 		JBrowse link
G Insr insulin receptor IEP RGD PMID:23633480 RGD:9685423 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414 		JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 IMP RGD PMID:24814243 RGD:13793384 NCBI chr 4:140,247,297...140,580,749
Ensembl chr 4:140,247,313...140,580,748 		JBrowse link
G Klkb1 kallikrein B1 IEP RGD PMID:9869390 RGD:7297052 NCBI chr16:50,151,127...50,175,407
Ensembl chr16:50,152,008...50,175,458 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:3335218 RGD:10059623 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240 		JBrowse link
G Ncl nucleolin IEP RGD PMID:7490256 RGD:9686389 NCBI chr 9:93,369,119...93,377,643
Ensembl chr 9:93,368,932...93,377,643 		JBrowse link
G Nfkbia NFKB inhibitor alpha IEP RGD PMID:24512945 RGD:10413865 NCBI chr 6:76,267,227...76,270,457
Ensembl chr 6:76,267,228...76,270,457 		JBrowse link
G Npm1 nucleophosmin 1 IEP RGD PMID:14635188 RGD:11534994 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IEP RGD PMID:29138817 RGD:15042871 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056 		JBrowse link
G Pcna proliferating cell nuclear antigen IEP RGD PMID:7906221 RGD:10448980 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570 		JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 IEP RGD PMID:191106 RGD:11554175 NCBI chr14:113,530,470...113,561,645
Ensembl chr14:113,530,470...113,561,645 		JBrowse link
G Pou2f1 POU class 2 homeobox 1 IEP RGD PMID:1841628 RGD:9743904 NCBI chr13:84,075,316...84,217,368
Ensembl chr13:84,083,632...84,217,366 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 IEP RGD PMID:15837430 RGD:2299961 NCBI chr 1:100,971,132...100,980,411
Ensembl chr 1:100,971,273...100,980,340 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 IEP RGD PMID:15837430 RGD:2299961 NCBI chr15:33,156,508...33,165,893
Ensembl chr15:33,156,492...33,165,895 		JBrowse link
G Ptch1 patched 1 IEP RGD PMID:22024090 RGD:12911223 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873 		JBrowse link
G Ptpn3 protein tyrosine phosphatase, non-receptor type 3 IEP RGD PMID:7591957 RGD:1599982 NCBI chr 5:74,248,996...74,368,167
Ensembl chr 5:74,248,996...74,368,186 		JBrowse link
G Rap1a RAP1A, member of RAS oncogene family IEP RGD PMID:9015365 RGD:10003155 NCBI chr 2:208,193,950...208,215,186
Ensembl chr 2:208,193,954...208,215,187 		JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IEP RGD PMID:22227930 RGD:9850085 NCBI chr 7:139,232,263...139,254,668
Ensembl chr 7:139,232,251...139,254,551 		JBrowse link
G Reg1a regenerating family member 1 alpha IEP RGD PMID:19284990 RGD:10044030 NCBI chr 4:109,497,962...109,500,626
Ensembl chr 4:109,497,962...109,501,082 		JBrowse link
G Rgn regucalcin IEP RGD PMID:7759556 RGD:9590197 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904 		JBrowse link
G Rpl10 ribosomal protein L10 IEP RGD PMID:6121318 RGD:11038709 NCBI chr  X:156,438,251...156,440,461
Ensembl chr  X:156,438,251...156,440,461 		JBrowse link
G Rpl13 ribosomal protein L13 IEP RGD PMID:6121318 RGD:11038709 NCBI chr19:55,917,489...55,920,040
Ensembl chr19:55,917,736...55,919,996 		JBrowse link
G Rpl18 ribosomal protein L18 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 1:101,700,910...101,703,551
Ensembl chr 1:101,701,975...101,703,550 		JBrowse link
G Rpl19 ribosomal protein L19 IEP RGD PMID:6121318 RGD:11038709 NCBI chr10:85,978,691...85,981,979
Ensembl chr10:85,978,691...85,981,979 		JBrowse link
G Rpl30 ribosomal protein L30 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 7:73,213,538...73,216,431
Ensembl chr 7:73,213,581...73,216,251 		JBrowse link
G Rpl32 ribosomal protein L32 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 4:147,715,480...147,719,044
Ensembl chr 6:145,777,318...145,777,767
Ensembl chr 4:145,777,318...145,777,767 		JBrowse link
G Rpl7 ribosomal protein L7 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 5:2,633,517...2,636,525
Ensembl chr 5:2,632,712...2,640,021 		JBrowse link
G Rps15 ribosomal protein S15 IEP RGD PMID:2829897 RGD:11040696 NCBI chr 7:12,282,134...12,283,573
Ensembl chr 7:12,282,109...12,283,608 		JBrowse link
G Rps16 ribosomal protein S16 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 1:85,405,499...85,408,444
Ensembl chr 1:85,405,512...85,408,444 		JBrowse link
G Rps24 ribosomal protein S24 IEP RGD PMID:7612009 RGD:11041663 NCBI chr16:757,390...762,091
Ensembl chr16:757,403...762,075 		JBrowse link
G Serpina10 serpin family A member 10 IEP RGD PMID:8670294 RGD:729731 NCBI chr 6:127,500,014...127,508,470
Ensembl chr 6:127,500,016...127,508,452
Ensembl chr 6:127,500,016...127,508,452 		JBrowse link
G Shh sonic hedgehog signaling molecule IEP RGD PMID:22790641 RGD:12832760 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 IEP RGD PMID:23633480 RGD:9685423 NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197 		JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IEP RGD PMID:7686911 RGD:729792 NCBI chr 6:104,611,026...104,640,033
Ensembl chr 6:104,611,026...104,615,302 		JBrowse link
G Sulf2 sulfatase 2 acts_upstream_of_or_within ISO MGI:3587954 (MGI:5515698|PMID:23740243) RGD PMID:23740243 MGI:5515698 NCBI chr 3:162,791,349...162,872,984
Ensembl chr 3:162,791,355...162,872,831 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:25862490 RGD:11073669 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199 		JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:9178702 RGD:14995465 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
Ensembl chr20:5,189,390...5,192,000 		JBrowse link
G Tyms thymidylate synthetase IEP RGD PMID:2707640 RGD:2317422 NCBI chr 9:121,918,875...121,931,564
Ensembl chr 9:121,918,947...121,931,564 		JBrowse link
G Ucp2 uncoupling protein 2 IEP RGD PMID:19104935 RGD:7204431 NCBI chr 1:165,506,375...165,512,744
Ensembl chr 1:165,506,361...165,512,744 		JBrowse link
G Vtn vitronectin IDA RGD PMID:10988248 RGD:10003090 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038 		JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:12217600 RGD:727737 NCBI chr 4:158,085,059...158,219,525
Ensembl chr 4:158,088,505...158,219,523 		JBrowse link
G Wdr35 WD repeat domain 35 IEP RGD PMID:18472094 RGD:11553927 NCBI chr 6:34,094,291...34,152,048
Ensembl chr 6:34,094,306...34,151,622 		JBrowse link
negative regulation of hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frzb frizzled-related protein acts_upstream_of_or_within ISO (MGI:4356222|PMID:19562671) RGD PMID:19562671 MGI:4356222 NCBI chr 3:67,635,604...67,668,772
Ensembl chr 3:67,635,607...67,668,772 		JBrowse link
negative regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A IMP RGD PMID:24190239 RGD:11252157 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in IMP
ISO
ISS		 PMID:15467833
(MGI:3057041|PMID:15467833)
GO_REF:0000024		 RGD
UniProt		 PMID:15467833, PMID:15467833 GO_REF:0000024 MGI:3057041, RGD:11059592 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345 		JBrowse link
G Cpb2 carboxypeptidase B2 IMP RGD PMID:19386599 RGD:7243112 NCBI chr15:57,290,849...57,339,762
Ensembl chr15:57,290,849...57,339,760 		JBrowse link
G Lims1 LIM zinc finger domain containing 1 acts_upstream_of_or_within ISO MGI:2385067 (MGI:5559100|PMID:24058607) RGD PMID:24058607 MGI:5559100 NCBI chr20:27,895,981...28,004,767
Ensembl chr20:27,954,433...28,002,082 		JBrowse link
G Lims2 LIM zinc finger domain containing 2 acts_upstream_of_or_within ISO MGI:1195263 (MGI:5559100|PMID:24058607) RGD PMID:24058607 MGI:5559100 NCBI chr18:24,707,951...24,746,159
Ensembl chr18:24,708,115...24,746,159 		JBrowse link
positive regulation of hepatocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IMP RGD PMID:19229878 RGD:8885195 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740 		JBrowse link
G Foxa3 forkhead box A3 IMP RGD PMID:9878541 RGD:2315086 NCBI chr 1:79,921,292...79,930,219
Ensembl chr 1:79,920,752...79,930,263 		JBrowse link
G Mesp1 mesoderm posterior bHLH transcription factor 1 involved_in ISO (MGI:4441249|PMID:18593560) RGD PMID:18593560 MGI:4441249 NCBI chr 1:141,532,390...141,533,908
Ensembl chr 1:141,532,390...141,533,908 		JBrowse link
positive regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD-like apoptosis regulator IMP RGD PMID:16033771 RGD:11341689 NCBI chr 9:65,534,608...65,586,395
Ensembl chr 9:65,534,704...65,587,251 		JBrowse link
G Fgf1 fibroblast growth factor 1 involved_in IDA PMID:16756958 UniProt PMID:16756958 RGD:10047366 NCBI chr18:32,273,830...32,359,831
Ensembl chr18:32,273,770...32,359,824 		JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in IDA PMID:16756958 UniProt PMID:16756958 RGD:10047366 NCBI chr10:18,047,109...18,082,290
Ensembl chr10:18,047,109...18,063,391 		JBrowse link
G Hpn hepsin involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:15614436)		 Ensembl
UniProt
RGD		 PMID:15614436 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:89,534,112...89,549,575
Ensembl chr 1:89,534,106...89,543,967 		JBrowse link
G Il18 interleukin 18 IDA RGD PMID:24412291 RGD:14696652 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299 		JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 IMP RGD PMID:24814243 RGD:13793384 NCBI chr 4:140,247,297...140,580,749
Ensembl chr 4:140,247,313...140,580,748 		JBrowse link
G Mdk midkine involved_in ISS
ISO		 GO_REF:0000024
(MGI:3606557|PMID:15482347)		 UniProt
RGD		 PMID:15482347 GO_REF:0000024 MGI:3606557 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916 		JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:2176946|MGI:3511276 (MGI:3719773|PMID:17438330) RGD PMID:17438330 MGI:3719773 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880 		JBrowse link
G Ptn pleiotrophin involved_in IDA
ISO		 (MGI:3606557|PMID:15482347) RGD PMID:15482347, PMID:16226713 MGI:3606557, RGD:9834996 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996 		JBrowse link
G Rtn4 reticulon 4 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6282933|PMID:23299899)		 UniProt
RGD		 PMID:23299899 GO_REF:0000024 MGI:6282933 NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458 		JBrowse link
G Tnf tumor necrosis factor IMP
IDA		 with PCB 126 or TCDD RGD PMID:9111198, PMID:17557910 RGD:14995469, RGD:14995481 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
Ensembl chr20:5,189,390...5,192,000 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (MGI:4943408|PMID:15962316) RGD PMID:15962316 MGI:4943408 NCBI chr 1:14,401,103...14,416,369
Ensembl chr 1:14,402,913...14,412,807 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:5515698|PMID:23740243) RGD PMID:23740243 MGI:5515698 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:1352298|PMID:10652269)		 UniProt
RGD		 PMID:10652269 GO_REF:0000024 MGI:1352298 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145 		JBrowse link
regulation of hepatocyte proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within ISO (MGI:5515698|PMID:23740243) RGD PMID:23740243 MGI:5515698 NCBI chr 7:70,620,794...70,633,171
Ensembl chr 7:70,620,766...70,630,338 		JBrowse link
G Ifng interferon gamma IDA RGD PMID:15799032 RGD:8142374 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419 		JBrowse link
G Plau plasminogen activator, urokinase IMP RGD PMID:17587687 RGD:6484147 NCBI chr15:3,644,296...3,650,765
Ensembl chr15:3,644,769...3,650,819 		JBrowse link
G Sulf2 sulfatase 2 acts_upstream_of_or_within ISO MGI:3587954 (MGI:5515698|PMID:23740243) RGD PMID:23740243 MGI:5515698 NCBI chr 3:162,791,349...162,872,984
Ensembl chr 3:162,791,355...162,872,831 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19638
    multicellular organismal process 8912
      multicellular organism development 5734
        system development 5280
          hepaticobiliary system development 264
            common bile duct development + 8
            gall bladder development 3
            liver development + 261
Path 2
Term Annotations click to browse term
  biological_process 19638
    developmental process 6777
      anatomical structure development 6250
        multicellular organism development 5734
          system development 5280
            hepaticobiliary system development 264
              common bile duct development + 8
              gall bladder development 3
              liver development + 261
paths to the root