HP (haptoglobin) - Rat Genome Database

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Gene: HP (haptoglobin) Homo sapiens
Analyze
Symbol: HP
Name: haptoglobin
RGD ID: 737269
HGNC Page HGNC:5141
Description: Enables hemoglobin binding activity. Involved in negative regulation of hydrogen peroxide catabolic process and response to hydrogen peroxide. Located in extracellular space. Part of haptoglobin-hemoglobin complex. Implicated in Plasmodium falciparum malaria; artery disease (multiple); gout; hemolytic anemia; and hyperglycemia. Biomarker of several diseases, including Kawasaki disease; artery disease (multiple); glucose metabolism disease (multiple); liver disease (multiple); and microcytic anemia (multiple).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: binding peptide; BP; haptoglobin alpha(1S)-beta; haptoglobin alpha(2FS)-beta; haptoglobin, alpha polypeptide; haptoglobin, beta polypeptide; HP2-ALPHA-2; HP2ALPHA2; HPA1S; MGC111141; zonulin
RGD Orthologs
Mouse
Rat
Squirrel
Pig
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381672,054,505 - 72,061,055 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1672,054,505 - 72,061,055 (+)EnsemblGRCh38hg38GRCh38
GRCh371672,088,404 - 72,094,954 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361670,646,009 - 70,652,458 (+)NCBINCBI36Build 36hg18NCBI36
Build 341670,646,008 - 70,652,458NCBI
Celera1656,402,627 - 56,409,074 (+)NCBICelera
Cytogenetic Map16q22.2NCBI
HuRef1657,855,340 - 57,861,787 (+)NCBIHuRef
CHM1_11673,501,856 - 73,508,303 (+)NCBICHM1_1
T2T-CHM13v2.01677,872,534 - 77,877,369 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
acute kidney failure  (EXP,ISO)
AIDS-Associated Nephropathy  (IEP)
allergic disease  (EXP)
alpha thalassemia  (IEP)
Anaphylaxis  (IDA)
anemia  (EXP)
Anhaptoglobinemia  (IAGP)
arteriosclerosis  (IAGP,ISO)
arthritis  (EXP)
asthma  (IEP)
atherosclerosis  (EXP,ISO)
autoimmune disease  (EXP)
autosomal dominant dyskeratosis congenita 6  (IAGP)
beta thalassemia  (IEP)
Brain Injuries  (ISO)
Breast Neoplasms  (EXP)
cardiovascular system disease  (EXP,IEP)
Carotid Artery Injuries  (ISO)
Cerebral Hemorrhage  (IMP,ISO)
Chemically-Induced Disorders  (EXP)
cholestasis  (ISO)
Chronic Hepatitis B  (EXP)
Chronic Hepatitis C  (EXP)
chronic kidney disease  (ISO)
chronic obstructive pulmonary disease  (IEP)
colitis  (ISO)
congestive heart failure  (ISO)
coronary artery disease  (IEP)
Coronary Disease  (IEP)
COVID-19  (HEP)
Diabetes Complications  (EXP)
diabetes mellitus  (IEP)
diabetic angiopathy  (EXP)
dilated cardiomyopathy  (IEP)
Drug-Related Side Effects and Adverse Reactions  (EXP)
Dyslipidemias  (EXP)
Experimental Arthritis  (ISO)
Experimental Diabetes Mellitus  (ISO)
Experimental Liver Cirrhosis  (ISO)
Experimental Mammary Neoplasms  (ISO)
Female Genital Neoplasms  (EXP)
Foodborne Diseases  (EXP)
genetic disease  (IAGP)
gout  (IAGP)
hemochromatosis  (EXP)
Hemolysis  (EXP)
hemolytic anemia  (IAGP)
hemolytic-uremic syndrome  (IEP)
Hemorrhagic Shock  (ISO)
hepatitis B  (EXP)
hepatocellular adenoma  (ISO)
hepatocellular carcinoma  (IEP)
human immunodeficiency virus infectious disease  (EXP)
Hypercholesterolemia  (IEP)
hyperglycemia  (IDA)
hyperinsulinism  (IEP)
hypertension  (EXP,IAGP,ISO)
Hypertensive Nephropathy  (ISO)
Hypoxia  (ISO)
Inflammation  (ISO)
inflammatory bowel disease  (ISO)
Intestinal Reperfusion Injury  (ISO)
iron deficiency anemia  (IEP)
Kawasaki disease  (IEP)
leukemia  (EXP)
liver cirrhosis  (IEP)
Liver Reperfusion Injury  (ISO)
lung cancer  (ISO)
malaria  (EXP)
metabolic dysfunction-associated steatotic liver disease  (IEP,ISO)
Metabolic Syndrome  (IEP,ISO)
middle cerebral artery infarction  (ISO)
myocardial infarction  (EXP,IAGP)
obesity  (IEP,ISO)
obstructive sleep apnea  (IEP)
oral squamous cell carcinoma  (IEP)
Pasteurellaceae Infections  (EXP)
pasteurellosis  (ISO)
Plasmodium falciparum malaria  (IAGP)
Pneumococcal Pneumonia  (IEP)
pre-eclampsia  (IAGP,IEP)
Pregnancy-Induced Hypertension  (EXP)
pulmonary embolism  (IEP,ISO)
pulmonary hypertension  (IDA,IEP)
retinal detachment  (EXP)
sarcoidosis  (IEP)
schizophrenia  (EXP)
severe acute respiratory syndrome  (IEP)
sickle cell anemia  (EXP)
Sickle Cell Trait  (IEP)
Starvation  (ISO)
Stroke  (IAGP,IEP)
trypanosomiasis  (ISO)
tuberculosis  (EXP)
type 1 diabetes mellitus  (EXP,ISO)
type 2 diabetes mellitus  (EXP,ISO)
ulcerative colitis  (EXP)
Venous Thrombosis  (IEP)
Wounds and Injuries  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-lariciresinol  (EXP)
(-)-lariciresinol  (EXP)
(R,R,R)-alpha-tocopherol  (EXP,ISO)
1,1-dichloroethene  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2-amino-2-deoxy-D-galactopyranose  (ISO)
3',5'-cyclic AMP  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP,ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (ISO)
aflatoxin B1  (EXP,ISO)
alclofenac  (EXP)
aldehydo-D-glucose  (EXP,ISO)
all-trans-retinoic acid  (EXP)
ammonium chloride  (ISO)
ampicillin  (ISO)
andrographolide  (ISO)
azathioprine  (ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-naphthoflavone  (EXP,ISO)
bexarotene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
Bisphenol B  (EXP)
bisphenol F  (EXP,ISO)
cadmium atom  (EXP)
calciol  (ISO)
calcitriol  (EXP)
cannabidiol  (ISO)
carbon nanotube  (ISO)
carnosic acid  (ISO)
CGP 52608  (EXP)
chlordecone  (ISO)
chlorpyrifos  (ISO)
cisplatin  (ISO)
clofibrate  (ISO)
cobalt dichloride  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (EXP)
corn oil  (ISO)
crocidolite asbestos  (EXP,ISO)
cyclosporin A  (EXP)
D-glucose  (EXP,ISO)
D-penicillamine  (EXP)
dexamethasone  (EXP,ISO)
dextran sulfate  (ISO)
diclofenac  (ISO)
dicrotophos  (EXP)
diethylstilbestrol  (ISO)
diisopropyl fluorophosphate  (ISO)
dimethyl sulfoxide  (ISO)
doramapimod  (ISO)
doxorubicin  (ISO)
flutamide  (ISO)
fructose  (ISO)
furan  (ISO)
genistein  (ISO)
gentamycin  (ISO)
glucose  (EXP,ISO)
hexachlorobenzene  (ISO)
hydrogen peroxide  (EXP)
indometacin  (EXP)
L-ascorbic acid  (EXP,ISO)
lactulose  (ISO)
lead(0)  (EXP)
lipopolysaccharide  (ISO)
menadione  (EXP)
methimazole  (EXP)
metronidazole  (ISO)
microcystin-LR  (ISO)
minocycline  (ISO)
morphine  (ISO)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-nitrosodimethylamine  (ISO)
neomycin  (ISO)
nickel atom  (EXP)
nitrofen  (ISO)
O-methyleugenol  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP)
pirinixic acid  (ISO)
potassium bromate  (ISO)
potassium chromate  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
profenofos  (ISO)
progesterone  (EXP,ISO)
quartz  (ISO)
quercetin  (EXP)
sarin  (ISO)
senecionine  (ISO)
serpentine asbestos  (EXP)
silicon dioxide  (EXP,ISO)
sodium arsenite  (ISO)
sodium fluoride  (ISO)
streptozocin  (ISO)
sulforaphane  (EXP)
T-2 toxin  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
titanium dioxide  (ISO)
trichloroethene  (ISO)
Triptolide  (ISO)
triptonide  (ISO)
trovafloxacin  (ISO)
tungsten  (ISO)
urethane  (EXP)
valproic acid  (EXP)
vancomycin  (ISO)
warfarin  (ISO)
zinc atom  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Methemoglobinemia and ascorbate deficiency in hemoglobin E beta thalassemia: metabolic and clinical implications. Allen A, etal., Blood. 2012 Oct 11;120(15):2939-44. doi: 10.1182/blood-2012-06-435875. Epub 2012 Aug 10.
2. Proteomic study of plasma from moderate hypercholesterolemic patients. Alonso-Orgaz S, etal., J Proteome Res. 2006 Sep;5(9):2301-8.
3. Hepatic expression of acute-phase protein genes during carcinogenesis induced by peroxisome proliferators. Anderson SP, etal., Mol Carcinog. 1999 Dec;26(4):226-38.
4. Serum concentrations of immunoglobulins and acute phase proteins in Nigerian women with preeclampsia. Arinola G, etal., Reprod Biol. 2006 Nov;6(3):265-74.
5. Protective effect of a new C5a receptor antagonist against ischemia-reperfusion injury in the rat small intestine. Arumugam TV, etal., J Surg Res. 2002 Apr;103(2):260-7.
6. Epistasis between the haptoglobin common variant and alpha+thalassemia influences risk of severe malaria in Kenyan children. Atkinson SH, etal., Blood. 2014 Mar 27;123(13):2008-16. doi: 10.1182/blood-2013-10-533489. Epub 2014 Jan 29.
7. Seasonal childhood anaemia in West Africa is associated with the haptoglobin 2-2 genotype. Atkinson SH, etal., PLoS Med. 2006 May;3(5):e172. Epub 2006 May 2.
8. Non-enzymic glycation of individual plasma proteins in normoglycemic and hyperglycemic patients. Austin GE, etal., Clin Chem. 1987 Dec;33(12):2220-4.
9. Haptoglobin and myeloperoxidase (- G463A) gene polymorphisms in Brazilian sickle cell patients with and without secondary iron overload. Barbosa LC, etal., Blood Cells Mol Dis. 2014 Feb-Mar;52(2-3):95-107.
10. Zeitschrift für die gesamte innere Medizin und ihre Grenzgebiete Beenken O, etal., Z Gesamte Inn Med. 1981 May 1;36(9):294-8.
11. A proteomic approach to identify differentially expressed plasma proteins between the fed and prolonged fasted states. Bertile F, etal., Proteomics. 2009 Jan;9(1):148-58. doi: 10.1002/pmic.200701001.
12. Polski merkuriusz lekarski : organ Polskiego Towarzystwa Lekarskiego Bogdanski P, etal., Pol Merkur Lekarski. 2006 Jul;21(121):12-4.
13. Hepatic heme and drug metabolism in rats with chronic mountain sickness. Bonkovsky HL, etal., Am J Physiol. 1986 Oct;251(4 Pt 1):G467-74.
14. Potential biomarkers for diagnosis of sarcoidosis using proteomics in serum. Bons JA, etal., Respir Med. 2007 Aug;101(8):1687-95. Epub 2007 Apr 18.
15. Catabolism of haemoglobin-haptoglobin complexes in haemolytic uraemia-like syndromes of different etiologies. Brandslund I, etal., Scand J Clin Lab Invest. 1982 Oct;42(6):521-7.
16. Proteomic analysis of rat plasma following transient focal cerebral ischemia. Chen R, etal., Biomark Med. 2011 Dec;5(6):837-46.
17. Obesity modulates the expression of haptoglobin in the white adipose tissue via TNFalpha. Chiellini C, etal., J Cell Physiol. 2002 Feb;190(2):251-8.
18. Serum haptoglobin: a novel marker of adiposity in humans. Chiellini C, etal., J Clin Endocrinol Metab. 2004 Jun;89(6):2678-83.
19. Serum haptoglobin concentrations in "pure" iron-deficiency anemia. Dash S and Das KC, Clin Chem. 1978 May;24(5):839-40.
20. Haptoglobin serum levels are independently associated with insulinemia in overweight and obese women. De Pergola G, etal., J Endocrinol Invest. 2007 May;30(5):399-403.
21. Evidence that brief stress may induce the acute phase response in rats. Deak T, etal., Am J Physiol. 1997 Dec;273(6 Pt 2):R1998-2004.
22. Refractory hypertension is associated with the haptoglobin 2-2 phenotype. Delanghe JR, etal., J Cardiovasc Risk. 1995 Apr;2(2):131-6.
23. Haptoglobin polymorphism and complications in established essential arterial hypertension. Delanghe JR, etal., J Hypertens. 1993 Aug;11(8):861-7.
24. Haptoglobin polymorphism in patients with preeclampsia. Depypere HT, etal., Clin Chem Lab Med. 2006;44(8):924-8.
25. iTRAQ-based proteomics reveals SOD2 as a potential salivary biomarker in liver cancer. Ding F, etal., Int J Biol Markers. 2019 Sep;34(3):221-231. doi: 10.1177/1724600819841619. Epub 2019 May 1.
26. Inflammation-sensitive plasma proteins, diabetes, and mortality and incidence of myocardial infarction and stroke: a population-based study. Engstrom G, etal., Diabetes. 2003 Feb;52(2):442-7.
27. Fatality of acute coronary events in relation to hypertension and low-grade inflammation: a population-based cohort study. Engstrom G, etal., J Hum Hypertens. 2006 Aug;20(8):581-6. Epub 2006 May 4.
28. Long-term effects of inflammation-sensitive plasma proteins and systolic blood pressure on incidence of stroke. Engstrom G, etal., Stroke. 2002 Dec;33(12):2744-9.
29. Proteomic analysis of post-hemorrhagic shock mesenteric lymph. Fang JF, etal., Shock. 2010 Sep;34(3):291-8.
30. Thyroid hormone preconditioning: protection against ischemia-reperfusion liver injury in the rat. Fernandez V, etal., Hepatology. 2007 Jan;45(1):170-7.
31. Influence of different stages of experimental chronic kidney disease on rats locomotor and postural skeletal muscles microcirculation. Flisinski M, etal., Ren Fail. 2008;30(4):443-51. doi: 10.1080/08860220801985694.
32. Expression profiles in surgically-induced carotid stenosis: a combined transcriptomic and proteomic investigation. Forte A, etal., J Cell Mol Med. 2008 Oct;12(5B):1956-73. doi: 10.1111/j.1582-4934.2008.00212.x.
33. Haptoglobin groups in acute myocardial infarction. Frohlander N and Johnson O, Hum Hered. 1989;39(6):345-50.
34. Liver preconditioning induced by iron in a rat model of ischemia/reperfusion. Galleano M, etal., Life Sci. 2011 Aug 15;89(7-8):221-8. doi: 10.1016/j.lfs.2011.06.005. Epub 2011 Jun 15.
35. Altered iron homeostasis in an animal model of hypertensive nephropathy: stroke-prone rats. Gelosa P, etal., J Hypertens. 2013 Nov;31(11):2259-69. doi: 10.1097/HJH.0b013e3283642f3e.
36. Markers of experimental acute inflammation in the Wistar Han rat with particular reference to haptoglobin and C-reactive protein. Giffen PS, etal., Arch Toxicol. 2003 Jul;77(7):392-402. Epub 2003 Mar 22.
37. [Haptoglobin phenotype distribution in patients at high risk of developing myocardial infarct]. Gogishvili AV, etal., Kardiologiia. 1985 Feb;25(2):55-8.
38. High blood pressure effects on the blood to cerebrospinal fluid barrier and cerebrospinal fluid protein composition: a two-dimensional electrophoresis study in spontaneously hypertensive rats. Gonzalez-Marrero I, etal., Int J Hypertens. 2013;2013:164653. doi: 10.1155/2013/164653. Epub 2013 Jan 21.
39. Blueberry husks and probiotics attenuate colorectal inflammation and oncogenesis, and liver injuries in rats exposed to cycling DSS-treatment. Hakansson A, etal., PLoS One. 2012;7(3):e33510. doi: 10.1371/journal.pone.0033510. Epub 2012 Mar 23.
40. Methaemalbumin formation in sickle cell disease: effect on oxidative protein modification and HO-1 induction. Hanson MS, etal., Br J Haematol. 2011 Aug;154(4):502-11. doi: 10.1111/j.1365-2141.2011.08738.x. Epub 2011 May 20.
41. Dietary supplementation of n-3 PUFA reduces weight gain and improves postprandial lipaemia and the associated inflammatory response in the obese JCR:LA-cp rat. Hassanali Z, etal., Diabetes Obes Metab. 2010 Feb;12(2):139-47. doi: 10.1111/j.1463-1326.2009.01130.x. Epub 2009 Nov 16.
42. Peroxiredoxin-2 and zinc-alpha-2-glycoprotein as potentially combined novel salivary biomarkers for early detection of oral squamous cell carcinoma using proteomic approaches. Heawchaiyaphum C, etal., J Proteomics. 2018 Feb 20;173:52-61. doi: 10.1016/j.jprot.2017.11.022. Epub 2017 Dec 1.
43. Acute-phase reactants and a supplemental diagnostic aid for Kawasaki disease. Huang MY, etal., Pediatr Cardiol. 2010 Nov;31(8):1209-13. Epub 2010 Oct 19.
44. Haptoglobin levels are associated with haptoglobin genotype and alpha+ -Thalassemia in a malaria-endemic area. Imrie H, etal., Am J Trop Med Hyg. 2006 Jun;74(6):965-71.
45. Hemoglobin-induced lung vascular oxidation, inflammation, and remodeling contribute to the progression of hypoxic pulmonary hypertension and is attenuated in rats with repeated-dose haptoglobin administration. Irwin DC, etal., Free Radic Biol Med. 2015 May;82:50-62. doi: 10.1016/j.freeradbiomed.2015.01.012. Epub 2015 Feb 2.
46. Primary pulmonary hypertension. Its association with microangiopathic hemolytic anemia and thrombocytopenia. Jubelirer SJ Arch Intern Med. 1991 Jun;151(6):1221-3.
47. The utility of pathway selective estrogen receptor ligands that inhibit nuclear factor-kappa B transcriptional activity in models of rheumatoid arthritis. Keith JC Jr, etal., Arthritis Res Ther. 2005;7(3):R427-38. Epub 2005 Feb 21.
48. Increase in serum haptoglobin and apolipoprotein M in patients with obstructive sleep apnoea. Kim J, etal., J Sleep Res. 2009 Sep;18(3):313-20. doi: 10.1111/j.1365-2869.2008.00725.x. Epub 2009 Jun 30.
49. Exercise maintains euglycemia in association with decreased activation of c-Jun NH2-terminal kinase and serine phosphorylation of IRS-1 in the liver of ZDF rats. Kiraly MA, etal., Am J Physiol Endocrinol Metab. 2010 Mar;298(3):E671-82. Epub 2009 Dec 8.
50. Reduction in plasma haptoglobin in humans with acute pulmonary embolism causing tricuspid regurgitation. Kline JA, etal., J Thromb Haemost. 2009 Sep;7(9):1597-9. Epub 2009 Jun 29.
51. Elucidating the molecular physiopathology of acute respiratory distress syndrome in severe acute respiratory syndrome patients. Kong SL, etal., Virus Res. 2009 Nov;145(2):260-9. Epub 2009 Jul 25.
52. Haptoglobin as an early serum biomarker of virus-induced autoimmune type 1 diabetes in biobreeding diabetes resistant and LEW1.WR1 rats. Kruger AJ, etal., Exp Biol Med (Maywood). 2010 Nov;235(11):1328-37. doi: 10.1258/ebm.2010.010150.
53. Magnetic resonance imaging of experimental mouse colitis and association with inflammatory activity. Larsson AE, etal., Inflamm Bowel Dis. 2006 Jun;12(6):478-85.
54. Relationship between group-specific component protein and the development of asthma. Lee SH, etal., Am J Respir Crit Care Med. 2011 Sep 1;184(5):528-36.
55. Haptoglobin genotype is a determinant of iron, lipid peroxidation, and macrophage accumulation in the atherosclerotic plaque. Levy AP, etal., Arterioscler Thromb Vasc Biol. 2007 Jan;27(1):134-40. Epub 2006 Oct 26.
56. Proteomic analysis of serum in lung cancer induced by 3-methylcholanthrene. Li M, etal., J Biomed Biotechnol. 2009;2009:397910. doi: 10.1155/2009/397910. Epub 2009 Sep 24.
57. Comparative proteome analysis of serum from acute pulmonary embolism rat model for biomarker discovery. Li SQ, etal., J Proteome Res. 2007 Jan;6(1):150-9.
58. Discovery of serum biomarkers of alcoholic fatty liver in a rodent model: C-reactive protein. Liu SL, etal., J Biomed Sci. 2011 Aug 1;18:52. doi: 10.1186/1423-0127-18-52.
59. Endotoxin-like effects in acute phase response to Trypanosoma brucei brucei infection are not due to gastrointestinal leakage. Ngure RM, etal., Parasitol Int. 2009 Dec;58(4):325-9. doi: 10.1016/j.parint.2009.06.008. Epub 2009 Jun 28.
60. Synthesis of acute phase proteins in rats with cirrhosis exposed to lipopolysaccharide. Nielsen SS, etal., Comp Hepatol. 2006 Sep 12;5:3.
61. Dietary conjugated linoleic acid preserves pancreatic function and reduces inflammatory markers in obese, insulin-resistant rats. Noto A, etal., Metabolism. 2007 Jan;56(1):142-51.
62. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
63. Pathology, Tissue Metalloproteinase Transcription and Haptoglobin Responses in Mice after Experimental Challenge with Different Isolates of Pasteurella multocida Obtained from Cases of Porcine Pneumonia. Pors SE, etal., J Comp Pathol. 2011 Aug-Oct;145(2-3):251-60. Epub 2011 Mar 8.
64. Proteomic profiling of N-linked glycoproteins identifies ConA-binding procathepsin D as a novel serum biomarker for hepatocellular carcinoma. Qi YJ, etal., Proteomics. 2014 Feb;14(2-3):186-95. doi: 10.1002/pmic.201300226.
65. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
66. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
67. Effect of glutathione depletion and hydrophilic bile acids on hepatic acute phase reaction in rats with extrahepatic cholestasis. Roeb E, etal., Scand J Gastroenterol. 2003 Aug;38(8):878-85.
68. Rimonabant-mediated changes in intestinal lipid metabolism and improved renal vascular dysfunction in the JCR:LA-cp rat model of prediabetic metabolic syndrome. Russell JC, etal., Am J Physiol Gastrointest Liver Physiol. 2010 Aug;299(2):G507-16. doi: 10.1152/ajpgi.00173.2010. Epub 2010 May 27.
69. Inflammatory markers and serum lipids in idiopathic dilated cardiomyopathy. Sampietro T, etal., Am J Cardiol. 2005 Dec 15;96(12):1718-20. Epub 2005 Nov 2.
70. Changes of acute-phase proteins in streptozotocin-induced diabetic rats. Saso L, etal., Physiol Res. 2000;49(4):403-9.
71. Anaphylactic transfusion reactions in haptoglobin-deficient patients with IgE and IgG haptoglobin antibodies. Shimada E, etal., Transfusion. 2002 Jun;42(6):766-73.
72. Vasoprotective effect of vitamin E: rescue of ethanol-induced atherosclerosis and inflammatory stress in rat vascular wall. Shirpoor A, etal., Int Immunopharmacol. 2013 Aug;16(4):498-504. doi: 10.1016/j.intimp.2013.04.024. Epub 2013 May 9.
73. Differential expression of plasma proteins in cyclosporine A-induced rat acute nephrotoxicity. Shu Z, etal., Biosci Biotechnol Biochem. 2009 Mar 23;73(3):592-8. Epub 2009 Mar 7.
74. Proteomic changes induced by effective chemopreventive ratios of n-3:n-6 fatty acids and tamoxifen against MNU-induced mammary cancer in the rat. Skibinski CG, etal., Cancer Prev Res (Phila). 2013 Sep;6(9):979-88. doi: 10.1158/1940-6207.CAPR-13-0152. Epub 2013 Jul 23.
75. The acute phase protein haptoglobin is locally expressed in arthritic and oncological tissues. Smeets MB, etal., Int J Exp Pathol. 2003 Apr;84(2):69-74.
76. Serum glycoproteins in coronary artery disease. Snyder S, etal., Circulation. 1977 Sep;56(3):359-62.
77. Iron-related proteins: candidate urine biomarkers in childhood HIV-associated renal diseases. Soler-Garcia AA, etal., Clin J Am Soc Nephrol. 2009 Apr;4(4):763-71. doi: 10.2215/CJN.0200608. Epub 2009 Mar 11.
78. Variability of haptoglobin and alpha 2-macroglobulin in Albino Oxford and Dark Augustin inbred strains of rats before and after trauma. Strnad M, etal., Vojnosanit Pregl. 2000 Jul-Aug;57(4):381-6.
79. Comparative proteomic studies of plasma from children with pneumococcal pneumonia. Tsai MH, etal., Scand J Infect Dis. 2009;41(6-7):416-24.
80. Identification of novel diagnostic biomarkers for asthma and chronic obstructive pulmonary disease. Verrills NM, etal., Am J Respir Crit Care Med. 2011 Jun 15;183(12):1633-43. Epub 2011 Mar 18.
81. Restoration of impaired intestinal barrier function by the hydrolysed casein diet contributes to the prevention of type 1 diabetes in the diabetes-prone BioBreeding rat. Visser JT, etal., Diabetologia. 2010 Dec;53(12):2621-8. doi: 10.1007/s00125-010-1903-9. Epub 2010 Sep 19.
82. Extent of inflammation predicts cardiovascular disease and overall mortality in seropositive rheumatoid arthritis. A retrospective cohort study from disease onset. Wallberg-Jonsson S, etal., J Rheumatol. 1999 Dec;26(12):2562-71.
83. Proteomics of microparticles after experimental pulmonary embolism. Watts JA, etal., Thromb Res. 2011 Oct 17.
84. Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients. Xiong Y, etal., Emerg Microbes Infect. 2020 Dec;9(1):761-770. doi: 10.1080/22221751.2020.1747363.
85. Serum proteomic analysis of extracorporeal shock wave therapy-enhanced diabetic wound healing in a streptozotocin-induced diabetes model. Yang MY, etal., Plast Reconstr Surg. 2014 Jan;133(1):59-68. doi: 10.1097/01.prs.0000439050.08733.cf.
86. Elevated serum haptoglobin after traumatic brain injury is synthesized mainly in liver. Yang S, etal., J Neurosci Res. 2013 Feb;91(2):230-9. doi: 10.1002/jnr.23159. Epub 2012 Nov 22.
87. Vascular tight junction disruption and angiogenesis in spontaneously hypertensive rat with neuroinflammatory white matter injury. Yang Y, etal., Neurobiol Dis. 2018 Jun;114:95-110. doi: 10.1016/j.nbd.2018.02.012. Epub 2018 Feb 24.
88. Proteomic identification of altered apolipoprotein patterns in pulmonary hypertension and vasculopathy of sickle cell disease. Yuditskaya S, etal., Blood. 2009 Jan 29;113(5):1122-8. Epub 2008 Nov 20.
89. Rapid clearance of circulating haptoglobin from plasma during acute pulmonary embolism in rats results in HMOX1 up-regulation in peripheral blood leukocytes. Zagorski J, etal., J Thromb Haemost. 2010 Feb;8(2):389-96. Epub 2009 Nov 23.
90. Potential diagnostic biomarkers in serum of idiopathic pulmonary arterial hypertension. Zhang J, etal., Respir Med. 2009 Dec;103(12):1801-6. Epub 2009 Aug 22.
91. Neuroprotective role of haptoglobin after intracerebral hemorrhage. Zhao X, etal., J Neurosci. 2009 Dec 16;29(50):15819-27. doi: 10.1523/JNEUROSCI.3776-09.2009.
92. Shenfu Injection suppresses inflammation by targeting haptoglobin and pentraxin 3 in rats with chronic ischemic heart failure. Zheng SD, etal., Chin J Integr Med. 2015 Jan;21(1):22-8. doi: 10.1007/s11655-013-1440-8. Epub 2013 Mar 15.
Additional References at PubMed
PMID:1478675   PMID:2787245   PMID:2820712   PMID:2987228   PMID:3455911   PMID:3519135   PMID:4018023   PMID:4573324   PMID:6310515   PMID:6310599   PMID:6325933   PMID:6330675  
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Genomics

Comparative Map Data
HP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381672,054,505 - 72,061,055 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1672,054,505 - 72,061,055 (+)EnsemblGRCh38hg38GRCh38
GRCh371672,088,404 - 72,094,954 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361670,646,009 - 70,652,458 (+)NCBINCBI36Build 36hg18NCBI36
Build 341670,646,008 - 70,652,458NCBI
Celera1656,402,627 - 56,409,074 (+)NCBICelera
Cytogenetic Map16q22.2NCBI
HuRef1657,855,340 - 57,861,787 (+)NCBIHuRef
CHM1_11673,501,856 - 73,508,303 (+)NCBICHM1_1
T2T-CHM13v2.01677,872,534 - 77,877,369 (+)NCBIT2T-CHM13v2.0
Hp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398110,301,760 - 110,305,804 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8110,301,760 - 110,305,804 (-)EnsemblGRCm39 Ensembl
GRCm388109,575,128 - 109,579,172 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8109,575,128 - 109,579,172 (-)EnsemblGRCm38mm10GRCm38
MGSCv378112,099,028 - 112,103,072 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368112,464,257 - 112,468,192 (-)NCBIMGSCv36mm8
Celera8113,800,405 - 113,804,474 (-)NCBICelera
Cytogenetic Map8D3NCBI
cM Map857.11NCBI
Hp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81954,449,151 - 54,453,701 (-)NCBIGRCr8
mRatBN7.21937,539,626 - 37,544,178 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1937,539,627 - 37,544,523 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1944,352,875 - 44,357,420 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01945,006,203 - 45,010,748 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01947,315,910 - 47,320,455 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01942,096,255 - 42,100,805 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1942,097,995 - 42,100,804 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01952,921,384 - 52,925,934 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41939,443,016 - 39,447,566 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11939,447,897 - 39,452,447 (-)NCBI
Celera1936,944,700 - 36,949,250 (-)NCBICelera
Cytogenetic Map19q12NCBI
LOC101976500
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934937,743,357 - 37,748,060 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493647521,841,054 - 21,845,821 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1614,980,382 - 14,985,245 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2614,643,378 - 14,648,241 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap6p15-p14NCBI

Variants

.
Variants in HP
33 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NG_012651.1:g.= duplication Haptoglobin, alpha-2 [RCV000017245]   pathogenic
NC_000016.10:g.(?_72054504)_(?_72076977)del deletion Anhaptoglobinemia [RCV000017246]|Hypohaptoglobinemia [RCV000017247] Chr16:72054504..72076977 [GRCh38]
Chr16:16q22.2		 pathogenic|affects
NM_005143.5(HP):c.-91A>C single nucleotide variant Anhaptoglobinemia [RCV000017248] Chr16:72054562 [GRCh38]
Chr16:72088461 [GRCh37]
Chr16:16q22.2		 risk factor|affects
NM_005143.5(HP):c.740T>C (p.Ile247Thr) single nucleotide variant Anhaptoglobinemia [RCV000017249] Chr16:72060409 [GRCh38]
Chr16:72094308 [GRCh37]
Chr16:16q22.2		 risk factor|affects
NM_005143.5(HP):c.214A>G (p.Lys72Glu) single nucleotide variant HAPTOGLOBIN, ALPHA-1, FAST-SLOW POLYMORPHISM [RCV000017244] Chr16:72057415 [GRCh38]
Chr16:72091314 [GRCh37]
Chr16:16q22.2		 benign
GRCh38/hg38 16q22.1-24.3(chr16:70514631-90081985)x3 copy number gain See cases [RCV000052422] Chr16:70514631..90081985 [GRCh38]
Chr16:70548534..90148393 [GRCh37]
Chr16:69106035..88675894 [NCBI36]
Chr16:16q22.1-24.3		 pathogenic
GRCh38/hg38 16q21-23.1(chr16:58456122-74708723)x3 copy number gain See cases [RCV000052408] Chr16:58456122..74708723 [GRCh38]
Chr16:58490026..74742621 [GRCh37]
Chr16:57047527..73300122 [NCBI36]
Chr16:16q21-23.1		 pathogenic
GRCh38/hg38 16q21-24.3(chr16:65313395-90081985)x3 copy number gain See cases [RCV000052421] Chr16:65313395..90081985 [GRCh38]
Chr16:65347298..90148393 [GRCh37]
Chr16:63904799..88675894 [NCBI36]
Chr16:16q21-24.3		 pathogenic
GRCh38/hg38 16q22.1-23.1(chr16:69918076-76723348)x1 copy number loss See cases [RCV000053356] Chr16:69918076..76723348 [GRCh38]
Chr16:69951979..76757245 [GRCh37]
Chr16:68509480..75314746 [NCBI36]
Chr16:16q22.1-23.1		 pathogenic
GRCh38/hg38 16q22.1-23.1(chr16:68698941-74353205)x1 copy number loss See cases [RCV000053337] Chr16:68698941..74353205 [GRCh38]
Chr16:68732844..74387103 [GRCh37]
Chr16:67290345..72944604 [NCBI36]
Chr16:16q22.1-23.1		 pathogenic
GRCh38/hg38 16q22.2-22.3(chr16:71279916-73246687)x3 copy number gain See cases [RCV000053867] Chr16:71279916..73246687 [GRCh38]
Chr16:71313819..73280586 [GRCh37]
Chr16:69871320..71838087 [NCBI36]
Chr16:16q22.2-22.3		 uncertain significance
GRCh38/hg38 16q22.1-24.1(chr16:70414573-84908120)x1 copy number loss See cases [RCV000133814] Chr16:70414573..84908120 [GRCh38]
Chr16:70448476..84941726 [GRCh37]
Chr16:69005977..83499227 [NCBI36]
Chr16:16q22.1-24.1		 pathogenic
GRCh38/hg38 16q21-24.1(chr16:62925929-84585795)x3 copy number gain See cases [RCV000135863] Chr16:62925929..84585795 [GRCh38]
Chr16:62959833..84619401 [GRCh37]
Chr16:61517334..83176902 [NCBI36]
Chr16:16q21-24.1		 pathogenic
GRCh38/hg38 16q22.1-24.3(chr16:70749398-90096995)x3 copy number gain See cases [RCV000137495] Chr16:70749398..90096995 [GRCh38]
Chr16:70783301..90163403 [GRCh37]
Chr16:69340802..88690904 [NCBI36]
Chr16:16q22.1-24.3		 pathogenic
GRCh38/hg38 16q22.2(chr16:72044363-72253331)x3 copy number gain See cases [RCV000137160] Chr16:72044363..72253331 [GRCh38]
Chr16:72078262..72287230 [GRCh37]
Chr16:70635763..70844731 [NCBI36]
Chr16:16q22.2		 likely benign|uncertain significance
GRCh38/hg38 16q21-24.3(chr16:65511483-90096995)x3 copy number gain See cases [RCV000139426] Chr16:65511483..90096995 [GRCh38]
Chr16:65545386..90163403 [GRCh37]
Chr16:64102887..88690904 [NCBI36]
Chr16:16q21-24.3		 pathogenic
GRCh38/hg38 16q22.1-23.3(chr16:69053457-83274681)x3 copy number gain See cases [RCV000142038] Chr16:69053457..83274681 [GRCh38]
Chr16:69087360..83308286 [GRCh37]
Chr16:67644861..81865787 [NCBI36]
Chr16:16q22.1-23.3		 pathogenic
GRCh38/hg38 16q21-24.3(chr16:64389378-90081985)x3 copy number gain See cases [RCV000142578] Chr16:64389378..90081985 [GRCh38]
Chr16:64423281..90148393 [GRCh37]
Chr16:62980782..88675894 [NCBI36]
Chr16:16q21-24.3		 pathogenic|likely pathogenic
GRCh38/hg38 16q12.2-24.3(chr16:52899183-90088654)x3 copy number gain See cases [RCV000143425] Chr16:52899183..90088654 [GRCh38]
Chr16:52933095..90155062 [GRCh37]
Chr16:51490596..88682563 [NCBI36]
Chr16:16q12.2-24.3		 pathogenic
GRCh38/hg38 16q21-23.3(chr16:65957829-83611443)x3 copy number gain See cases [RCV000143742] Chr16:65957829..83611443 [GRCh38]
Chr16:65991732..83645048 [GRCh37]
Chr16:64549233..82202549 [NCBI36]
Chr16:16q21-23.3		 pathogenic
GRCh37/hg19 16q11.2-24.3(chr16:46615804-90142285)x1 copy number loss Breast ductal adenocarcinoma [RCV000207138] Chr16:46615804..90142285 [GRCh37]
Chr16:16q11.2-24.3		 uncertain significance
GRCh37/hg19 16q22.2(chr16:71103288-72092204)x1 copy number loss Breast ductal adenocarcinoma [RCV000207278] Chr16:71103288..72092204 [GRCh37]
Chr16:16q22.2		 uncertain significance
GRCh38/hg38 16q22.2(chr16:72059151-72063259)x0 copy number loss Breast ductal adenocarcinoma [RCV000207095] Chr16:72059151..72063259 [GRCh38]
Chr16:72093050..72097158 [GRCh37]
Chr16:16q22.2		 uncertain significance
Single allele complex Breast ductal adenocarcinoma [RCV000207314] Chr16:56368689..90141355 [GRCh37]
Chr16:16q12.2-24.3		 uncertain significance
NM_005143.5(HP):c.111dup (p.Glu38fs) duplication Anhaptoglobinemia [RCV000490325] Chr16:72056546..72056547 [GRCh38]
Chr16:72090445..72090446 [GRCh37]
Chr16:16q22.2		 uncertain significance
GRCh37/hg19 16q11.2-24.3(chr16:46464488-90155062)x3 copy number gain See cases [RCV000446110] Chr16:46464488..90155062 [GRCh37]
Chr16:16q11.2-24.3		 pathogenic
GRCh37/hg19 16q22.2(chr16:72093025-72110913)x3 copy number gain See cases [RCV000447344] Chr16:72093025..72110913 [GRCh37]
Chr16:16q22.2		 benign
GRCh37/hg19 16p13.3-q24.3(chr16:69193-90274381)x3 copy number gain See cases [RCV000446684] Chr16:69193..90274381 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16q22.2(chr16:72093025-72119382)x3 copy number gain See cases [RCV000445996] Chr16:72093025..72119382 [GRCh37]
Chr16:16q22.2		 benign
GRCh37/hg19 16p13.2-q24.3(chr16:9273328-89548493)x3 copy number gain See cases [RCV000511622] Chr16:9273328..89548493 [GRCh37]
Chr16:16p13.2-q24.3		 uncertain significance
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062) copy number gain See cases [RCV000511296] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062)x3 copy number gain See cases [RCV000512138] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16q11.2-24.3(chr16:46497599-90354753)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626429] Chr16:46497599..90354753 [GRCh37]
Chr16:16q11.2-24.3		 drug response
GRCh37/hg19 16q11.2-24.3(chr16:46455960-90354753)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626435] Chr16:46455960..90354753 [GRCh37]
Chr16:16q11.2-24.3		 drug response
GRCh37/hg19 16q13-24.3(chr16:57051473-89797669)x3 copy number gain See cases [RCV000512511] Chr16:57051473..89797669 [GRCh37]
Chr16:16q13-24.3		 pathogenic
GRCh37/hg19 16q12.2-22.2(chr16:54416050-72453266)x3 copy number gain not provided [RCV000683820] Chr16:54416050..72453266 [GRCh37]
Chr16:16q12.2-22.2		 pathogenic
GRCh37/hg19 16q22.1-22.2(chr16:70646969-72849701)x1 copy number loss not provided [RCV000683827] Chr16:70646969..72849701 [GRCh37]
Chr16:16q22.1-22.2		 likely pathogenic
GRCh37/hg19 16q22.2-22.3(chr16:71561717-73724195)x1 copy number loss not provided [RCV000683830] Chr16:71561717..73724195 [GRCh37]
Chr16:16q22.2-22.3		 likely pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90274695)x3 copy number gain not provided [RCV000738918] Chr16:88165..90274695 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:61451-90294632)x3 copy number gain not provided [RCV000738915] Chr16:61451..90294632 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90163275)x3 copy number gain not provided [RCV000738917] Chr16:88165..90163275 [GRCh37]
Chr16:16p13.3-q24.3		 pathogenic
GRCh37/hg19 16q22.2(chr16:72089740-72110756)x3 copy number gain not provided [RCV000739203] Chr16:72089740..72110756 [GRCh37]
Chr16:16q22.2		 benign
GRCh37/hg19 16q22.2(chr16:72091054-72092993)x1 copy number loss not provided [RCV000739204] Chr16:72091054..72092993 [GRCh37]
Chr16:16q22.2		 benign
GRCh37/hg19 16q22.2(chr16:72092677-72093627)x0 copy number loss not provided [RCV000739205] Chr16:72092677..72093627 [GRCh37]
Chr16:16q22.2		 benign
GRCh37/hg19 16q22.2(chr16:72094757-72109354)x3 copy number gain not provided [RCV000739206] Chr16:72094757..72109354 [GRCh37]
Chr16:16q22.2		 benign
GRCh37/hg19 16q22.2(chr16:72088964-72109354)x1 copy number loss not provided [RCV000751737] Chr16:72088964..72109354 [GRCh37]
Chr16:16q22.2		 benign
NM_005143.5(HP):c.957C>T (p.Pro319=) single nucleotide variant HP-related disorder [RCV003920493]|not provided [RCV000879896] Chr16:72060626 [GRCh38]
Chr16:72094525 [GRCh37]
Chr16:16q22.2		 benign
NM_005143.5(HP):c.1086C>T (p.His362=) single nucleotide variant HP-related disorder [RCV003943004]|not provided [RCV000947716] Chr16:72060755 [GRCh38]
Chr16:72094654 [GRCh37]
Chr16:16q22.2		 benign
NM_005143.5(HP):c.1110T>C (p.Tyr370=) single nucleotide variant not provided [RCV000964225] Chr16:72060779 [GRCh38]
Chr16:72094678 [GRCh37]
Chr16:16q22.2		 benign
NM_005143.5(HP):c.1083T>C (p.Val361=) single nucleotide variant not provided [RCV000900348] Chr16:72060752 [GRCh38]
Chr16:72094651 [GRCh37]
Chr16:16q22.2		 likely benign
NM_005143.5(HP):c.708T>G (p.Val236=) single nucleotide variant not provided [RCV000909588] Chr16:72060377 [GRCh38]
Chr16:72094276 [GRCh37]
Chr16:16q22.2		 likely benign
NM_005143.5(HP):c.112G>A (p.Glu38Lys) single nucleotide variant not provided [RCV000958414] Chr16:72056553 [GRCh38]
Chr16:72090452 [GRCh37]
Chr16:16q22.2		 benign
NM_005143.5(HP):c.564T>G (p.Gly188=) single nucleotide variant not provided [RCV000964434] Chr16:72060233 [GRCh38]
Chr16:72094132 [GRCh37]
Chr16:16q22.2		 likely benign
NM_005143.5(HP):c.1044A>G (p.Glu348=) single nucleotide variant not provided [RCV000939401] Chr16:72060713 [GRCh38]
Chr16:72094612 [GRCh37]
Chr16:16q22.2		 likely benign
NM_005143.5(HP):c.759A>G (p.Lys253=) single nucleotide variant not provided [RCV000911322] Chr16:72060428 [GRCh38]
Chr16:72094327 [GRCh37]
Chr16:16q22.2		 likely benign
NM_005143.5(HP):c.8C>A (p.Ala3Asp) single nucleotide variant not provided [RCV000890829] Chr16:72056163 [GRCh38]
Chr16:72090062 [GRCh37]
Chr16:16q22.2		 benign
GRCh37/hg19 16q21-24.3(chr16:61524229-90155062)x3 copy number gain not provided [RCV001249359] Chr16:61524229..90155062 [GRCh37]
Chr16:16q21-24.3		 not provided
NC_000016.9:g.(?_72042664)_(72146396_?)dup duplication not provided [RCV001314623] Chr16:72042664..72146396 [GRCh37]
Chr16:16q22.2		 uncertain significance
GRCh37/hg19 16q22.1-23.1(chr16:68971067-74823560)x1 copy number loss See cases [RCV002285074] Chr16:68971067..74823560 [GRCh37]
Chr16:16q22.1-23.1		 pathogenic
NC_000016.9:g.(?_69680960)_(72146396_?)dup duplication Immunodeficiency [RCV001950695] Chr16:69680960..72146396 [GRCh37]
Chr16:16q22.1-22.2		 uncertain significance
NC_000016.9:g.(?_66545871)_(72146396_?)dup duplication Dyskeratosis congenita, autosomal dominant 6 [RCV001900384]|Immunodeficiency [RCV001900385]|not provided [RCV001900386] Chr16:66545871..72146396 [GRCh37]
Chr16:16q21-22.2		 uncertain significance
GRCh37/hg19 16q11.2-24.3(chr16:46503968-90155062)x3 copy number gain not provided [RCV002221458] Chr16:46503968..90155062 [GRCh37]
Chr16:16q11.2-24.3		 pathogenic
NC_000016.9:g.(?_65821800)_(72146396_?)del deletion Dyskeratosis congenita, autosomal dominant 6 [RCV003122496] Chr16:65821800..72146396 [GRCh37]
Chr16:16q21-22.2		 uncertain significance
GRCh37/hg19 16q22.2-24.3(chr16:71641395-90161959)x3 copy number gain Syndromic anorectal malformation [RCV002286607] Chr16:71641395..90161959 [GRCh37]
Chr16:16q22.2-24.3		 likely pathogenic
GRCh37/hg19 16q22.2(chr16:71799420-72372326)x1 copy number loss not provided [RCV002475003] Chr16:71799420..72372326 [GRCh37]
Chr16:16q22.2		 uncertain significance
GRCh37/hg19 16q22.2(chr16:71422334-72110927)x4 copy number gain not provided [RCV002474984] Chr16:71422334..72110927 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.857G>A (p.Arg286Gln) single nucleotide variant not specified [RCV004207258] Chr16:72060526 [GRCh38]
Chr16:72094425 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.389A>G (p.Glu130Gly) single nucleotide variant not specified [RCV004076777] Chr16:72059135 [GRCh38]
Chr16:72093034 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.718C>A (p.Pro240Thr) single nucleotide variant not specified [RCV004077215] Chr16:72060387 [GRCh38]
Chr16:72094286 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.482G>A (p.Arg161Gln) single nucleotide variant not specified [RCV004084531] Chr16:72060151 [GRCh38]
Chr16:72094050 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.683A>C (p.Lys228Thr) single nucleotide variant not specified [RCV004104202] Chr16:72060352 [GRCh38]
Chr16:72094251 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.512G>A (p.Gly171Asp) single nucleotide variant not specified [RCV004130190] Chr16:72060181 [GRCh38]
Chr16:72094080 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.971C>T (p.Pro324Leu) single nucleotide variant not specified [RCV004187532] Chr16:72060640 [GRCh38]
Chr16:72094539 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.830G>A (p.Arg277His) single nucleotide variant not specified [RCV004182001] Chr16:72060499 [GRCh38]
Chr16:72094398 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.46C>A (p.Leu16Ile) single nucleotide variant not specified [RCV004166699] Chr16:72056201 [GRCh38]
Chr16:72090100 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.886C>A (p.Leu296Met) single nucleotide variant not specified [RCV004099546] Chr16:72060555 [GRCh38]
Chr16:72094454 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.1087G>A (p.Asp363Asn) single nucleotide variant not specified [RCV004172635] Chr16:72060756 [GRCh38]
Chr16:72094655 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.464C>G (p.Pro155Arg) single nucleotide variant not specified [RCV004119138] Chr16:72060133 [GRCh38]
Chr16:72094032 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.832G>A (p.Val278Met) single nucleotide variant not specified [RCV004097802] Chr16:72060501 [GRCh38]
Chr16:72094400 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.211A>G (p.Lys71Glu) single nucleotide variant not specified [RCV004080168] Chr16:72057412 [GRCh38]
Chr16:72091311 [GRCh37]
Chr16:16q22.2		 likely benign
NM_005143.5(HP):c.208G>A (p.Asp70Asn) single nucleotide variant not specified [RCV004080167] Chr16:72057409 [GRCh38]
Chr16:72091308 [GRCh37]
Chr16:16q22.2		 likely benign
NM_005143.5(HP):c.19G>C (p.Val7Leu) single nucleotide variant not specified [RCV004250540] Chr16:72056174 [GRCh38]
Chr16:72090073 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.464C>A (p.Pro155Gln) single nucleotide variant not specified [RCV004288779] Chr16:72060133 [GRCh38]
Chr16:72094032 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.811G>A (p.Asp271Asn) single nucleotide variant not specified [RCV004336521] Chr16:72060480 [GRCh38]
Chr16:72094379 [GRCh37]
Chr16:16q22.2		 uncertain significance
GRCh37/hg19 16q22.1-22.3(chr16:69709450-73535741)x1 copy number loss not provided [RCV003483292] Chr16:69709450..73535741 [GRCh37]
Chr16:16q22.1-22.3		 pathogenic
GRCh37/hg19 16q22.1-23.2(chr16:70607067-81561138)x3 copy number gain not provided [RCV003485121] Chr16:70607067..81561138 [GRCh37]
Chr16:16q22.1-23.2		 pathogenic
NM_005143.5(HP):c.1059C>T (p.Gly353=) single nucleotide variant not provided [RCV003419435] Chr16:72060728 [GRCh38]
Chr16:72094627 [GRCh37]
Chr16:16q22.2		 likely benign
NM_005143.5(HP):c.1005T>C (p.Asn335=) single nucleotide variant not provided [RCV003426811] Chr16:72060674 [GRCh38]
Chr16:72094573 [GRCh37]
Chr16:16q22.2		 likely benign
NM_005143.5(HP):c.780G>A (p.Glu260=) single nucleotide variant HP-related disorder [RCV003977305] Chr16:72060449 [GRCh38]
Chr16:72094348 [GRCh37]
Chr16:16q22.2		 benign
NM_005143.5(HP):c.443-5G>A single nucleotide variant HP-related disorder [RCV003971591] Chr16:72060107 [GRCh38]
Chr16:72094006 [GRCh37]
Chr16:16q22.2		 likely benign
NM_005143.5(HP):c.1112C>G (p.Ala371Gly) single nucleotide variant not specified [RCV004402136] Chr16:72060781 [GRCh38]
Chr16:72094680 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.1145C>T (p.Ala382Val) single nucleotide variant not specified [RCV004402137] Chr16:72060814 [GRCh38]
Chr16:72094713 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.550A>T (p.Asn184Tyr) single nucleotide variant not specified [RCV004402138] Chr16:72060219 [GRCh38]
Chr16:72094118 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.659C>T (p.Thr220Ile) single nucleotide variant not specified [RCV004402139] Chr16:72060328 [GRCh38]
Chr16:72094227 [GRCh37]
Chr16:16q22.2		 uncertain significance
NM_005143.5(HP):c.970C>T (p.Pro324Ser) single nucleotide variant not specified [RCV004402140] Chr16:72060639 [GRCh38]
Chr16:72094538 [GRCh37]
Chr16:16q22.2		 uncertain significance
NC_000016.9:g.(?_70286624)_(72146396_?)del deletion not provided [RCV004582883] Chr16:70286624..72146396 [GRCh37] pathogenic
NC_000016.9:g.(?_68679283)_(72146396_?)del deletion Immunodeficiency [RCV004581539] Chr16:68679283..72146396 [GRCh37] uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3077
Count of miRNA genes:861
Interacting mature miRNAs:1009
Transcripts:ENST00000355906, ENST00000357763, ENST00000398131, ENST00000561927, ENST00000562488, ENST00000562526, ENST00000564499, ENST00000565574, ENST00000565807, ENST00000566821, ENST00000567185, ENST00000567612, ENST00000568417, ENST00000569639, ENST00000570083, ENST00000576168
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH79153  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371672,094,678 - 72,094,838UniSTSGRCh37
Build 361670,652,179 - 70,652,339RGDNCBI36
Celera1656,408,797 - 56,408,957RGD
Cytogenetic Map16q22.2UniSTS
HuRef1657,861,510 - 57,861,670UniSTS
GeneMap99-GB4 RH Map16428.71UniSTS
NCBI RH Map16557.9UniSTS
hshp1g5  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371672,094,398 - 72,094,547UniSTSGRCh37
Build 361670,651,899 - 70,652,048RGDNCBI36
Celera1656,408,517 - 56,408,666RGD
Cytogenetic Map16q22.2UniSTS
HuRef1657,861,230 - 57,861,379UniSTS
GDB:180916  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371672,090,131 - 72,090,367UniSTSGRCh37
Build 361670,647,632 - 70,647,868RGDNCBI36
Celera1656,404,250 - 56,404,486RGD
Cytogenetic Map16q22.2UniSTS
HuRef1657,856,963 - 57,857,199UniSTS
GDB:181556  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371672,110,637 - 72,110,823UniSTSGRCh37
GRCh371672,094,446 - 72,094,632UniSTSGRCh37
Build 361670,651,947 - 70,652,133RGDNCBI36
Celera1656,424,756 - 56,424,942UniSTS
Celera1656,408,565 - 56,408,751RGD
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map16q22.1UniSTS
HuRef1657,877,469 - 57,877,655UniSTS
HuRef1657,861,278 - 57,861,464UniSTS
GDB:181606  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371672,110,974 - 72,111,121UniSTSGRCh37
GRCh371672,094,783 - 72,094,930UniSTSGRCh37
Build 361670,652,284 - 70,652,431RGDNCBI36
Celera1656,425,093 - 56,425,240UniSTS
Celera1656,408,902 - 56,409,049RGD
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map16q22.1UniSTS
HuRef1657,877,806 - 57,877,953UniSTS
HuRef1657,861,615 - 57,861,762UniSTS
SHGC-61149  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371672,110,947 - 72,111,095UniSTSGRCh37
GRCh371672,094,756 - 72,094,904UniSTSGRCh37
Build 361670,652,257 - 70,652,405RGDNCBI36
Celera1656,408,875 - 56,409,023RGD
Celera1656,425,066 - 56,425,214UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map16q22.2UniSTS
HuRef1657,861,588 - 57,861,736UniSTS
HuRef1657,877,779 - 57,877,927UniSTS
GeneMap99-GB4 RH Map16427.18UniSTS
NCBI RH Map16559.1UniSTS
HP_143  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371672,110,351 - 72,111,250UniSTSGRCh37
GRCh371672,094,160 - 72,095,059UniSTSGRCh37
Build 361670,651,661 - 70,652,560RGDNCBI36
Celera1656,408,279 - 56,409,178RGD
Celera1656,424,470 - 56,425,369UniSTS
HuRef1657,860,992 - 57,861,891UniSTS
HuRef1657,877,183 - 57,878,082UniSTS
RH70305  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371672,110,975 - 72,111,098UniSTSGRCh37
GRCh371672,094,784 - 72,094,907UniSTSGRCh37
Build 361670,652,285 - 70,652,408RGDNCBI36
Celera1656,408,903 - 56,409,026RGD
Celera1656,425,094 - 56,425,217UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map16q22.2UniSTS
HuRef1657,861,616 - 57,861,739UniSTS
HuRef1657,877,807 - 57,877,930UniSTS
GeneMap99-GB4 RH Map16428.71UniSTS
NCBI RH Map16557.9UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
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Cytogenetic Map14q32.13UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map20q13.2-q13.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map2q24.1UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map14q31UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map18p11.2UniSTS
Cytogenetic Map7p11.1UniSTS
Cytogenetic Map1q31-q32UniSTS
Cytogenetic Map2q12UniSTS
Cytogenetic Map3p21.32UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map6q24.1UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map17q11-q21UniSTS
Cytogenetic Map12q23UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map17q24-q25UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map8q12.3UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map4q35.2UniSTS
Cytogenetic Map3p26.1UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map2q21.2UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map18p11.3UniSTS
Cytogenetic Map17q11.1UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map13q12.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q32-q34UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map6q23-q24UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map6p12.3-p11.2UniSTS
Cytogenetic Map6q16.1-q16.3UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map7q31.2UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map3q25.2UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map3q12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map3q22.3UniSTS
Cytogenetic Map7q21.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map22q12-q13UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map1q24.3UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2p16.2UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q12.1UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q33-q34UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map13q32UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map3p26.3UniSTS
Cytogenetic Map2q11.1UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High 8 376 376 5 376 1 5 5 64
Medium 74 1214 312 60 793 55 513 61 422 33 131 483 5 635 313
Low 1349 1414 842 153 416 16 2271 1241 1466 118 880 738 137 480 1481
Below cutoff 926 335 181 32 327 16 1469 855 1736 207 407 341 28 25 953 4

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_012651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001126102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001318138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_005143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC004682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC009087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH003344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK055872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK314700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC107587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC121124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC121125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BJ994335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB117006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB134891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ314870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  K00422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  K01763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT923784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU313678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L29394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC742139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC742140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC742141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC742142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC742143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC742144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC742145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC742146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC742147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC742148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC742149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M13192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M69197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  T71743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X00606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X00637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X01786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X01791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X01793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X02206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000228226   ⟹   ENSP00000228226
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,609 - 72,060,890 (+)Ensembl
Ensembl Acc Id: ENST00000355906   ⟹   ENSP00000348170
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,505 - 72,061,055 (+)Ensembl
Ensembl Acc Id: ENST00000357763   ⟹   ENSP00000350406
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,626 - 72,061,016 (+)Ensembl
Ensembl Acc Id: ENST00000398131   ⟹   ENSP00000381199
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,609 - 72,061,054 (+)Ensembl
Ensembl Acc Id: ENST00000561927
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,056,161 - 72,058,028 (+)Ensembl
Ensembl Acc Id: ENST00000562488
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,623 - 72,058,509 (+)Ensembl
Ensembl Acc Id: ENST00000562526   ⟹   ENSP00000454413
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,626 - 72,061,055 (+)Ensembl
Ensembl Acc Id: ENST00000564499   ⟹   ENSP00000456503
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,626 - 72,060,634 (+)Ensembl
Ensembl Acc Id: ENST00000565574   ⟹   ENSP00000454966
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,629 - 72,061,009 (+)Ensembl
Ensembl Acc Id: ENST00000565807
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,623 - 72,057,346 (+)Ensembl
Ensembl Acc Id: ENST00000566821
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,626 - 72,061,054 (+)Ensembl
Ensembl Acc Id: ENST00000567185   ⟹   ENSP00000464070
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,056,161 - 72,060,928 (+)Ensembl
Ensembl Acc Id: ENST00000567612   ⟹   ENSP00000463491
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,056,161 - 72,061,026 (+)Ensembl
Ensembl Acc Id: ENST00000568417   ⟹   ENSP00000462662
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,638 - 72,059,188 (+)Ensembl
Ensembl Acc Id: ENST00000569639   ⟹   ENSP00000463755
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,623 - 72,059,461 (+)Ensembl
Ensembl Acc Id: ENST00000570083   ⟹   ENSP00000457629
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,592 - 72,061,055 (+)Ensembl
Ensembl Acc Id: ENST00000576168   ⟹   ENSP00000461999
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,056,161 - 72,059,818 (+)Ensembl
Ensembl Acc Id: ENST00000613898   ⟹   ENSP00000478279
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1672,054,626 - 72,061,054 (+)Ensembl
RefSeq Acc Id: NM_001126102   ⟹   NP_001119574
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381672,054,505 - 72,061,055 (+)NCBI
GRCh371672,088,470 - 72,094,955 (+)NCBI
HuRef1657,855,340 - 57,861,787 (+)ENTREZGENE
CHM1_11673,501,839 - 73,508,303 (+)NCBI
T2T-CHM13v2.01677,872,534 - 77,877,369 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001318138   ⟹   NP_001305067
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381672,054,505 - 72,061,055 (+)NCBI
CHM1_11673,501,839 - 73,508,303 (+)NCBI
T2T-CHM13v2.01677,872,534 - 77,877,369 (+)NCBI
Sequence:
RefSeq Acc Id: NM_005143   ⟹   NP_005134
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381672,054,505 - 72,061,055 (+)NCBI
GRCh371672,088,470 - 72,094,955 (+)NCBI
Build 361670,646,009 - 70,652,458 (+)NCBI Archive
HuRef1657,855,340 - 57,861,787 (+)ENTREZGENE
CHM1_11673,501,839 - 73,508,303 (+)NCBI
T2T-CHM13v2.01677,872,534 - 77,877,369 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001119574 (Get FASTA)   NCBI Sequence Viewer  
  NP_001305067 (Get FASTA)   NCBI Sequence Viewer  
  NP_005134 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA52684 (Get FASTA)   NCBI Sequence Viewer  
  AAA52685 (Get FASTA)   NCBI Sequence Viewer  
  AAA52687 (Get FASTA)   NCBI Sequence Viewer  
  AAA88078 (Get FASTA)   NCBI Sequence Viewer  
  AAA88080 (Get FASTA)   NCBI Sequence Viewer  
  AAC27432 (Get FASTA)   NCBI Sequence Viewer  
  AAH17862 (Get FASTA)   NCBI Sequence Viewer  
  AAH58031 (Get FASTA)   NCBI Sequence Viewer  
  AAH70299 (Get FASTA)   NCBI Sequence Viewer  
  AAI07588 (Get FASTA)   NCBI Sequence Viewer  
  AAI21125 (Get FASTA)   NCBI Sequence Viewer  
  AAI21126 (Get FASTA)   NCBI Sequence Viewer  
  ABC40729 (Get FASTA)   NCBI Sequence Viewer  
  ALX40934 (Get FASTA)   NCBI Sequence Viewer  
  ALX40935 (Get FASTA)   NCBI Sequence Viewer  
  ALX40936 (Get FASTA)   NCBI Sequence Viewer  
  ALX40937 (Get FASTA)   NCBI Sequence Viewer  
  ALX40938 (Get FASTA)   NCBI Sequence Viewer  
  ALX40939 (Get FASTA)   NCBI Sequence Viewer  
  ALX40940 (Get FASTA)   NCBI Sequence Viewer  
  ALX40941 (Get FASTA)   NCBI Sequence Viewer  
  ALX40942 (Get FASTA)   NCBI Sequence Viewer  
  ALX40943 (Get FASTA)   NCBI Sequence Viewer  
  ALX40944 (Get FASTA)   NCBI Sequence Viewer  
  ALX40945 (Get FASTA)   NCBI Sequence Viewer  
  ALX40946 (Get FASTA)   NCBI Sequence Viewer  
  ALX40947 (Get FASTA)   NCBI Sequence Viewer  
  ALX40948 (Get FASTA)   NCBI Sequence Viewer  
  ALX40949 (Get FASTA)   NCBI Sequence Viewer  
  ALX40950 (Get FASTA)   NCBI Sequence Viewer  
  ALX40951 (Get FASTA)   NCBI Sequence Viewer  
  ALX40952 (Get FASTA)   NCBI Sequence Viewer  
  ALX40953 (Get FASTA)   NCBI Sequence Viewer  
  ALX40954 (Get FASTA)   NCBI Sequence Viewer  
  ALX40955 (Get FASTA)   NCBI Sequence Viewer  
  ALX40956 (Get FASTA)   NCBI Sequence Viewer  
  ALX40957 (Get FASTA)   NCBI Sequence Viewer  
  ALX40958 (Get FASTA)   NCBI Sequence Viewer  
  ALX40959 (Get FASTA)   NCBI Sequence Viewer  
  ALX40960 (Get FASTA)   NCBI Sequence Viewer  
  ANG83739 (Get FASTA)   NCBI Sequence Viewer  
  ANG83740 (Get FASTA)   NCBI Sequence Viewer  
  ANG83741 (Get FASTA)   NCBI Sequence Viewer  
  ANG83742 (Get FASTA)   NCBI Sequence Viewer  
  ANG83743 (Get FASTA)   NCBI Sequence Viewer  
  ANG83744 (Get FASTA)   NCBI Sequence Viewer  
  ANG83745 (Get FASTA)   NCBI Sequence Viewer  
  ANG83746 (Get FASTA)   NCBI Sequence Viewer  
  ANG83747 (Get FASTA)   NCBI Sequence Viewer  
  ANG83748 (Get FASTA)   NCBI Sequence Viewer  
  ANG83749 (Get FASTA)   NCBI Sequence Viewer  
  ANG83750 (Get FASTA)   NCBI Sequence Viewer  
  ANG83751 (Get FASTA)   NCBI Sequence Viewer  
  ANG83752 (Get FASTA)   NCBI Sequence Viewer  
  ANG83753 (Get FASTA)   NCBI Sequence Viewer  
  ANG83754 (Get FASTA)   NCBI Sequence Viewer  
  ANG83755 (Get FASTA)   NCBI Sequence Viewer  
  ANG83756 (Get FASTA)   NCBI Sequence Viewer  
  ANG83757 (Get FASTA)   NCBI Sequence Viewer  
  ANG83758 (Get FASTA)   NCBI Sequence Viewer  
  ANG83759 (Get FASTA)   NCBI Sequence Viewer  
  ANG83760 (Get FASTA)   NCBI Sequence Viewer  
  ANG83761 (Get FASTA)   NCBI Sequence Viewer  
  ANG83762 (Get FASTA)   NCBI Sequence Viewer  
  ANG83763 (Get FASTA)   NCBI Sequence Viewer  
  ANG83764 (Get FASTA)   NCBI Sequence Viewer  
  ANG83765 (Get FASTA)   NCBI Sequence Viewer  
  ANG83766 (Get FASTA)   NCBI Sequence Viewer  
  ANG83767 (Get FASTA)   NCBI Sequence Viewer  
  ANG83768 (Get FASTA)   NCBI Sequence Viewer  
  ANG83769 (Get FASTA)   NCBI Sequence Viewer  
  ANG83770 (Get FASTA)   NCBI Sequence Viewer  
  ANG83771 (Get FASTA)   NCBI Sequence Viewer  
  ANG83772 (Get FASTA)   NCBI Sequence Viewer  
  ANG83773 (Get FASTA)   NCBI Sequence Viewer  
  ANG83774 (Get FASTA)   NCBI Sequence Viewer  
  ANG83775 (Get FASTA)   NCBI Sequence Viewer  
  ANG83776 (Get FASTA)   NCBI Sequence Viewer  
  ANG83777 (Get FASTA)   NCBI Sequence Viewer  
  ANG83778 (Get FASTA)   NCBI Sequence Viewer  
  ANG83779 (Get FASTA)   NCBI Sequence Viewer  
  ANG83780 (Get FASTA)   NCBI Sequence Viewer  
  ANG83781 (Get FASTA)   NCBI Sequence Viewer  
  ANG83782 (Get FASTA)   NCBI Sequence Viewer  
  ANG83783 (Get FASTA)   NCBI Sequence Viewer  
  ANG83784 (Get FASTA)   NCBI Sequence Viewer  
  ANG83785 (Get FASTA)   NCBI Sequence Viewer  
  ANG83786 (Get FASTA)   NCBI Sequence Viewer  
  ANG83787 (Get FASTA)   NCBI Sequence Viewer  
  ANG83788 (Get FASTA)   NCBI Sequence Viewer  
  ANG83789 (Get FASTA)   NCBI Sequence Viewer  
  ANG83790 (Get FASTA)   NCBI Sequence Viewer  
  ANG83791 (Get FASTA)   NCBI Sequence Viewer  
  ANG83792 (Get FASTA)   NCBI Sequence Viewer  
  ANG83793 (Get FASTA)   NCBI Sequence Viewer  
  ANG83794 (Get FASTA)   NCBI Sequence Viewer  
  ANG83795 (Get FASTA)   NCBI Sequence Viewer  
  ANG83796 (Get FASTA)   NCBI Sequence Viewer  
  ANG83797 (Get FASTA)   NCBI Sequence Viewer  
  ANG83798 (Get FASTA)   NCBI Sequence Viewer  
  ANG83799 (Get FASTA)   NCBI Sequence Viewer  
  ANG83800 (Get FASTA)   NCBI Sequence Viewer  
  ANG83801 (Get FASTA)   NCBI Sequence Viewer  
  ANG83802 (Get FASTA)   NCBI Sequence Viewer  
  ANG83803 (Get FASTA)   NCBI Sequence Viewer  
  ANG83804 (Get FASTA)   NCBI Sequence Viewer  
  ANG83805 (Get FASTA)   NCBI Sequence Viewer  
  ANG83806 (Get FASTA)   NCBI Sequence Viewer  
  ANG83807 (Get FASTA)   NCBI Sequence Viewer  
  ANG83808 (Get FASTA)   NCBI Sequence Viewer  
  ANG83809 (Get FASTA)   NCBI Sequence Viewer  
  ANG83810 (Get FASTA)   NCBI Sequence Viewer  
  ANG83811 (Get FASTA)   NCBI Sequence Viewer  
  ANG83812 (Get FASTA)   NCBI Sequence Viewer  
  ANG83813 (Get FASTA)   NCBI Sequence Viewer  
  ANG83814 (Get FASTA)   NCBI Sequence Viewer  
  ANG83815 (Get FASTA)   NCBI Sequence Viewer  
  ANG83816 (Get FASTA)   NCBI Sequence Viewer  
  ANG83817 (Get FASTA)   NCBI Sequence Viewer  
  ANG83818 (Get FASTA)   NCBI Sequence Viewer  
  ANG83819 (Get FASTA)   NCBI Sequence Viewer  
  ANG83820 (Get FASTA)   NCBI Sequence Viewer  
  ANG83821 (Get FASTA)   NCBI Sequence Viewer  
  ANG83822 (Get FASTA)   NCBI Sequence Viewer  
  ANG83823 (Get FASTA)   NCBI Sequence Viewer  
  ANG83824 (Get FASTA)   NCBI Sequence Viewer  
  ANG83825 (Get FASTA)   NCBI Sequence Viewer  
  ANG83826 (Get FASTA)   NCBI Sequence Viewer  
  ANG83827 (Get FASTA)   NCBI Sequence Viewer  
  ANG83828 (Get FASTA)   NCBI Sequence Viewer  
  ANG83829 (Get FASTA)   NCBI Sequence Viewer  
  ANG83830 (Get FASTA)   NCBI Sequence Viewer  
  ANG83831 (Get FASTA)   NCBI Sequence Viewer  
  ANG83832 (Get FASTA)   NCBI Sequence Viewer  
  ANG83833 (Get FASTA)   NCBI Sequence Viewer  
  ANG83834 (Get FASTA)   NCBI Sequence Viewer  
  ANG83835 (Get FASTA)   NCBI Sequence Viewer  
  ANG83836 (Get FASTA)   NCBI Sequence Viewer  
  ANG83837 (Get FASTA)   NCBI Sequence Viewer  
  ANG83838 (Get FASTA)   NCBI Sequence Viewer  
  ANG83839 (Get FASTA)   NCBI Sequence Viewer  
  ANG83840 (Get FASTA)   NCBI Sequence Viewer  
  ANG83841 (Get FASTA)   NCBI Sequence Viewer  
  ANG83842 (Get FASTA)   NCBI Sequence Viewer  
  ANG83843 (Get FASTA)   NCBI Sequence Viewer  
  ANG83844 (Get FASTA)   NCBI Sequence Viewer  
  ANG83845 (Get FASTA)   NCBI Sequence Viewer  
  ANG83846 (Get FASTA)   NCBI Sequence Viewer  
  ANG83847 (Get FASTA)   NCBI Sequence Viewer  
  ANG83848 (Get FASTA)   NCBI Sequence Viewer  
  ANG83849 (Get FASTA)   NCBI Sequence Viewer  
  ANG83850 (Get FASTA)   NCBI Sequence Viewer  
  ANG83851 (Get FASTA)   NCBI Sequence Viewer  
  ANG83852 (Get FASTA)   NCBI Sequence Viewer  
  ANG83853 (Get FASTA)   NCBI Sequence Viewer  
  ANG83854 (Get FASTA)   NCBI Sequence Viewer  
  ANG83855 (Get FASTA)   NCBI Sequence Viewer  
  ANG83856 (Get FASTA)   NCBI Sequence Viewer  
  ANG83857 (Get FASTA)   NCBI Sequence Viewer  
  ANG83858 (Get FASTA)   NCBI Sequence Viewer  
  ANG83859 (Get FASTA)   NCBI Sequence Viewer  
  ANG83860 (Get FASTA)   NCBI Sequence Viewer  
  ANG83861 (Get FASTA)   NCBI Sequence Viewer  
  ANG83862 (Get FASTA)   NCBI Sequence Viewer  
  ANG83863 (Get FASTA)   NCBI Sequence Viewer  
  ANG83864 (Get FASTA)   NCBI Sequence Viewer  
  ANG83865 (Get FASTA)   NCBI Sequence Viewer  
  ANG83866 (Get FASTA)   NCBI Sequence Viewer  
  ANG83867 (Get FASTA)   NCBI Sequence Viewer  
  ANG83868 (Get FASTA)   NCBI Sequence Viewer  
  ANG83869 (Get FASTA)   NCBI Sequence Viewer  
  ANG83870 (Get FASTA)   NCBI Sequence Viewer  
  ANG83871 (Get FASTA)   NCBI Sequence Viewer  
  ANG83872 (Get FASTA)   NCBI Sequence Viewer  
  ANG83873 (Get FASTA)   NCBI Sequence Viewer  
  ANG83874 (Get FASTA)   NCBI Sequence Viewer  
  ANG83875 (Get FASTA)   NCBI Sequence Viewer  
  ANG83876 (Get FASTA)   NCBI Sequence Viewer  
  ANG83877 (Get FASTA)   NCBI Sequence Viewer  
  ANG83878 (Get FASTA)   NCBI Sequence Viewer  
  ANG83879 (Get FASTA)   NCBI Sequence Viewer  
  ANG83880 (Get FASTA)   NCBI Sequence Viewer  
  ANG83881 (Get FASTA)   NCBI Sequence Viewer  
  ANG83882 (Get FASTA)   NCBI Sequence Viewer  
  ANG83883 (Get FASTA)   NCBI Sequence Viewer  
  ANG83884 (Get FASTA)   NCBI Sequence Viewer  
  ANG83885 (Get FASTA)   NCBI Sequence Viewer  
  ANG83886 (Get FASTA)   NCBI Sequence Viewer  
  ANG83887 (Get FASTA)   NCBI Sequence Viewer  
  ANG83888 (Get FASTA)   NCBI Sequence Viewer  
  ANG83889 (Get FASTA)   NCBI Sequence Viewer  
  ANG83890 (Get FASTA)   NCBI Sequence Viewer  
  ANG83891 (Get FASTA)   NCBI Sequence Viewer  
  ANG83892 (Get FASTA)   NCBI Sequence Viewer  
  ANG83893 (Get FASTA)   NCBI Sequence Viewer  
  ANG83894 (Get FASTA)   NCBI Sequence Viewer  
  ANG83895 (Get FASTA)   NCBI Sequence Viewer  
  ANG83896 (Get FASTA)   NCBI Sequence Viewer  
  ANG83897 (Get FASTA)   NCBI Sequence Viewer  
  ANG83898 (Get FASTA)   NCBI Sequence Viewer  
  ANG83899 (Get FASTA)   NCBI Sequence Viewer  
  ANG83900 (Get FASTA)   NCBI Sequence Viewer  
  ANG83901 (Get FASTA)   NCBI Sequence Viewer  
  ANG83902 (Get FASTA)   NCBI Sequence Viewer  
  ANG83903 (Get FASTA)   NCBI Sequence Viewer  
  ANG83904 (Get FASTA)   NCBI Sequence Viewer  
  ANG83905 (Get FASTA)   NCBI Sequence Viewer  
  ANG83906 (Get FASTA)   NCBI Sequence Viewer  
  ANG83907 (Get FASTA)   NCBI Sequence Viewer  
  ANG83908 (Get FASTA)   NCBI Sequence Viewer  
  BAF98793 (Get FASTA)   NCBI Sequence Viewer  
  BAG51589 (Get FASTA)   NCBI Sequence Viewer  
  BDU79550 (Get FASTA)   NCBI Sequence Viewer  
  BDU79551 (Get FASTA)   NCBI Sequence Viewer  
  BDU79552 (Get FASTA)   NCBI Sequence Viewer  
  BDU79553 (Get FASTA)   NCBI Sequence Viewer  
  BDU79554 (Get FASTA)   NCBI Sequence Viewer  
  BDU79555 (Get FASTA)   NCBI Sequence Viewer  
  BDU79556 (Get FASTA)   NCBI Sequence Viewer  
  BDU79557 (Get FASTA)   NCBI Sequence Viewer  
  BDU79558 (Get FASTA)   NCBI Sequence Viewer  
  BDU79559 (Get FASTA)   NCBI Sequence Viewer  
  BDU79560 (Get FASTA)   NCBI Sequence Viewer  
  CAA25248 (Get FASTA)   NCBI Sequence Viewer  
  CAA25267 (Get FASTA)   NCBI Sequence Viewer  
  CAA25926 (Get FASTA)   NCBI Sequence Viewer  
  EAW59194 (Get FASTA)   NCBI Sequence Viewer  
  EAW59195 (Get FASTA)   NCBI Sequence Viewer  
  EAW59196 (Get FASTA)   NCBI Sequence Viewer  
  EAW59197 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000348170
  ENSP00000348170.5
  ENSP00000350406.5
  ENSP00000381199
  ENSP00000381199.2
  ENSP00000454413.1
  ENSP00000454966
  ENSP00000454966.1
  ENSP00000456503.1
  ENSP00000457629.1
  ENSP00000461999.1
  ENSP00000462662.1
  ENSP00000463491.1
  ENSP00000463755.1
  ENSP00000464070.1
GenBank Protein P00738 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_005134   ⟸   NM_005143
- Peptide Label: isoform 1 preproprotein
- UniProtKB: Q6LBY9 (UniProtKB/Swiss-Prot),   Q3B7J0 (UniProtKB/Swiss-Prot),   Q2PP15 (UniProtKB/Swiss-Prot),   Q0VAC5 (UniProtKB/Swiss-Prot),   Q0VAC4 (UniProtKB/Swiss-Prot),   P00737 (UniProtKB/Swiss-Prot),   B0AZL5 (UniProtKB/Swiss-Prot),   Q9UC67 (UniProtKB/Swiss-Prot),   P00738 (UniProtKB/Swiss-Prot),   J3QR68 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001119574   ⟸   NM_001126102
- Peptide Label: isoform 2 preproprotein
- UniProtKB: J3QR68 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001305067   ⟸   NM_001318138
- Peptide Label: isoform 3 preproprotein
- UniProtKB: A0A0C4DGL8 (UniProtKB/TrEMBL),   J3QR68 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000463755   ⟸   ENST00000569639
Ensembl Acc Id: ENSP00000381199   ⟸   ENST00000398131
Ensembl Acc Id: ENSP00000228226   ⟸   ENST00000228226
Ensembl Acc Id: ENSP00000457629   ⟸   ENST00000570083
Ensembl Acc Id: ENSP00000478279   ⟸   ENST00000613898
Ensembl Acc Id: ENSP00000461999   ⟸   ENST00000576168
Ensembl Acc Id: ENSP00000454413   ⟸   ENST00000562526
Ensembl Acc Id: ENSP00000456503   ⟸   ENST00000564499
Ensembl Acc Id: ENSP00000454966   ⟸   ENST00000565574
Ensembl Acc Id: ENSP00000348170   ⟸   ENST00000355906
Ensembl Acc Id: ENSP00000463491   ⟸   ENST00000567612
Ensembl Acc Id: ENSP00000464070   ⟸   ENST00000567185
Ensembl Acc Id: ENSP00000350406   ⟸   ENST00000357763
Ensembl Acc Id: ENSP00000462662   ⟸   ENST00000568417
Protein Domains
Peptidase S1   Sushi

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P00738-F1-model_v2 AlphaFold P00738 1-406 view protein structure

Promoters
RGD ID:7232801
Promoter ID:EPDNEW_H22146
Type:initiation region
Name:HP_1
Description:haptoglobin
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H22147  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381672,054,542 - 72,054,602EPDNEW
RGD ID:7232803
Promoter ID:EPDNEW_H22147
Type:initiation region
Name:HP_2
Description:haptoglobin
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H22146  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381672,056,177 - 72,056,237EPDNEW
RGD ID:6849700
Promoter ID:EP11111
Type:single initiation site
Name:HS_HP_A
Description:Haptoglobin Hp1F.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Notes:homology_group=Homology group 228; Human haptoglobin
Experiment Methods:Nuclease protection; Primer extension
Regulation:adult, liver; (induced by or strongly expressed in) acute phase
Position:No map positions available.
RGD ID:6849702
Promoter ID:EP57001
Type:single initiation site
Name:HS_HP_B
Description:haptoglobin Hp2.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Notes:homology_group=Homology group 228; Human haptoglobin
Experiment Methods:Nuclease protection; Primer extension
Regulation:adult, liver; (induced by or strongly expressed in) acute phase
Position:No map positions available.

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:5141 AgrOrtholog
COSMIC HP COSMIC
Ensembl Genes ENSG00000257017 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000355906 ENTREZGENE
  ENST00000355906.10 UniProtKB/Swiss-Prot
  ENST00000357763.8 UniProtKB/TrEMBL
  ENST00000398131 ENTREZGENE
  ENST00000398131.6 UniProtKB/Swiss-Prot
  ENST00000562526.5 UniProtKB/TrEMBL
  ENST00000564499.5 UniProtKB/TrEMBL
  ENST00000565574 ENTREZGENE
  ENST00000565574.5 UniProtKB/TrEMBL
  ENST00000567185.7 UniProtKB/TrEMBL
  ENST00000567612.2 UniProtKB/TrEMBL
  ENST00000568417.6 UniProtKB/TrEMBL
  ENST00000569639.5 UniProtKB/TrEMBL
  ENST00000570083.5 UniProtKB/Swiss-Prot
  ENST00000576168.6 UniProtKB/TrEMBL
Gene3D-CATH 2.40.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Complement Module, domain 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000257017 GTEx
HGNC ID HGNC:5141 ENTREZGENE
Human Proteome Map HP Human Proteome Map
InterPro Haptoglobin UniProtKB/TrEMBL
  Peptidase_S1_PA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_S1_PA_chymotrypsin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_S1A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sushi/SCR/CCP_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sushi_SCR_CCP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Trypsin_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:3240 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 3240 ENTREZGENE
OMIM 140100 OMIM
PANTHER COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HAPTOGLOBIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HAPTOGLOBIN UniProtKB/TrEMBL
  TRYPTASE-RELATED UniProtKB/TrEMBL
Pfam Trypsin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA29415 PharmGKB
PIRSF Haptoglobin UniProtKB/TrEMBL
PRINTS CHYMOTRYPSIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE SUSHI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRYPSIN_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART CCP UniProtKB/TrEMBL
  Tryp_SPc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50494 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57535 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0C4DGL8 ENTREZGENE, UniProtKB/TrEMBL
  A0A0U4DJF7_HUMAN UniProtKB/TrEMBL
  A0A0U4DKQ8_HUMAN UniProtKB/TrEMBL
  A0A0U4ERW6_HUMAN UniProtKB/TrEMBL
  A0A0U4EXB4_HUMAN UniProtKB/TrEMBL
  B0AZL5 ENTREZGENE
  H0Y300_HUMAN UniProtKB/TrEMBL
  H3BMJ7_HUMAN UniProtKB/TrEMBL
  H3BS21_HUMAN UniProtKB/TrEMBL
  HPT_HUMAN UniProtKB/Swiss-Prot
  J3KRH2_HUMAN UniProtKB/TrEMBL
  J3KSV1_HUMAN UniProtKB/TrEMBL
  J3QLC9_HUMAN UniProtKB/TrEMBL
  J3QQI8_HUMAN UniProtKB/TrEMBL
  J3QR68 ENTREZGENE, UniProtKB/TrEMBL
  P00737 ENTREZGENE
  P00738 ENTREZGENE
  Q0VAC4 ENTREZGENE
  Q0VAC5 ENTREZGENE
  Q14552_HUMAN UniProtKB/TrEMBL
  Q2PP15 ENTREZGENE
  Q3B7J0 ENTREZGENE
  Q6LBY9 ENTREZGENE
  Q6PEJ8_HUMAN UniProtKB/TrEMBL
  Q9UC67 ENTREZGENE
UniProt Secondary B0AZL5 UniProtKB/Swiss-Prot
  P00737 UniProtKB/Swiss-Prot
  Q0VAC4 UniProtKB/Swiss-Prot
  Q0VAC5 UniProtKB/Swiss-Prot
  Q2PP15 UniProtKB/Swiss-Prot
  Q3B7J0 UniProtKB/Swiss-Prot
  Q6LBY9 UniProtKB/Swiss-Prot
  Q9UC67 UniProtKB/Swiss-Prot