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Gene: SOX9 (SRY-box transcription factor 9) Homo sapiens
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Symbol: SOX9
Name: SRY-box transcription factor 9
Description: Exhibits several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; protein kinase A catalytic subunit binding activity; and transcription regulatory region DNA binding activity. Involved in several processes, including animal organ development; positive regulation of cell differentiation; and regulation of transcription by RNA polymerase II. Localizes to the nucleoplasm and protein-containing complex. Implicated in 46 XY gonadal dysgenesis and campomelic dysplasia.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: CMD1; CMPD1; SRA1; SRXX2; SRXY10; SRY (sex determining region Y)-box9; SRY (sex-determining region Y)-box 9 protein; SRY box 9; SRY-box 9; SRY-related HMG-box, gene 9; transcription factor SOX-9
Orthologs:
Mus musculus (house mouse) : Sox9 (SRY (sex determining region Y)-box 9)  MGI  Alliance
Rattus norvegicus (Norway rat) : Sox9 (SRY-box transcription factor 9)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sox9 (SRY-box transcription factor 9)
Pan paniscus (bonobo/pygmy chimpanzee) : SOX9 (SRY-box transcription factor 9)
Canis lupus familiaris (dog) : SOX9 (SRY-box transcription factor 9)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sox9 (SRY-box transcription factor 9)
Sus scrofa (pig) : SOX9 (SRY-box transcription factor 9)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381772,121,020 - 72,126,416 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371770,117,161 - 70,122,561 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361767,628,756 - 67,634,156 (+)NCBINCBI36hg18NCBI36
Build 341767,628,755 - 67,634,156NCBI
Celera1766,688,499 - 66,693,898 (+)NCBI
Cytogenetic Map17q24.3NCBI
HuRef1765,510,108 - 65,515,656 (+)NCBIHuRef
CHM1_11770,181,222 - 70,186,622 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on SOX9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1322513
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2019-10-22
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.