AURKA (aurora kinase A) - Rat Genome Database

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Gene: AURKA (aurora kinase A) Homo sapiens
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Symbol: AURKA
Name: aurora kinase A
RGD ID: 1353168
HGNC Page HGNC
Description: Enables protein heterodimerization activity; protein kinase binding activity; and protein serine/threonine kinase activity. Involved in several processes, including peptidyl-serine phosphorylation; positive regulation of mitochondrial fission; and regulation of protein stability. Acts upstream of or within liver regeneration; protein phosphorylation; and response to wounding. Located in several cellular components, including nucleoplasm; perinuclear region of cytoplasm; and spindle pole. Colocalizes with spindle microtubule. Implicated in colorectal cancer; ovarian cancer; and uterine cancer. Biomarker of carcinoma (multiple); invasive ductal carcinoma; prostate carcinoma in situ; and urinary bladder cancer.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: AIK; ARK-1; ARK1; AURA; aurora 2; Aurora-A kinase; aurora-related kinase 1; aurora/IPL1-like kinase; aurora/IPL1-related kinase 1; AURORA2; breast tumor-amplified kinase; breast-tumor-amplified kinase; BTAK; hARK1; IPL1-related kinase; MGC34538; PPP1R47; protein phosphatase 1, regulatory subunit 47; serine/threonine kinase 6; serine/threonine protein kinase 15; serine/threonine-protein kinase 15; serine/threonine-protein kinase 6; serine/threonine-protein kinase aurora-A; STK15; STK6; STK7
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: AC018635.1   AURKAP1   AURKAP2  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2056,369,389 - 56,392,337 (-)EnsemblGRCh38hg38GRCh38
GRCh382056,369,390 - 56,392,308 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372054,944,446 - 54,967,271 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362054,377,852 - 54,400,758 (-)NCBINCBI36hg18NCBI36
Celera2051,683,792 - 51,707,784 (-)NCBI
Cytogenetic Map20q13.2NCBI
HuRef2051,729,262 - 51,752,229 (-)NCBIHuRef
CHM1_12054,845,539 - 54,868,444 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (EXP)
1,1-dichloroethene  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3-dimethoxynaphthalene-1,4-dione  (EXP)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-methoxyethanol  (ISO)
2-methylcholine  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-methylcholanthrene  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (ISO)
5-azacytidine  (EXP)
5-fluorouracil  (EXP,ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acetylsalicylic acid  (EXP)
acrolein  (EXP)
afimoxifene  (EXP)
aflatoxin B1  (EXP)
aldehydo-D-glucose  (ISO)
alpha-pinene  (EXP)
ammonium chloride  (ISO)
aristolochic acid  (EXP)
arsane  (EXP)
arsenic atom  (EXP)
arsenite(3-)  (ISO)
arsenous acid  (EXP)
azathioprine  (EXP)
belinostat  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (EXP)
benzo[b]fluoranthene  (ISO)
bis(2-chloroethyl) sulfide  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
cadmium atom  (EXP)
cadmium dichloride  (ISO)
calcitriol  (EXP)
carbon nanotube  (ISO)
chlorambucil  (ISO)
chloroprene  (ISO)
cisplatin  (EXP,ISO)
cobalt dichloride  (EXP)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (EXP)
coumestrol  (EXP)
CU-O LINKAGE  (EXP)
curcumin  (EXP)
cyclosporin A  (EXP)
D-glucose  (ISO)
daunorubicin  (EXP)
diarsenic trioxide  (EXP)
diazinon  (ISO)
dibenz[a,h]anthracene  (ISO)
dieldrin  (ISO)
diethyl maleate  (ISO)
diethylstilbestrol  (ISO)
dioxygen  (EXP)
dorsomorphin  (EXP)
doxorubicin  (EXP)
Echimidine  (EXP)
Enterolactone  (EXP)
ethanol  (ISO)
etoposide  (ISO)
fenvalerate  (ISO)
flavonoids  (ISO)
flutamide  (ISO)
folic acid  (EXP)
formaldehyde  (EXP)
fulvestrant  (EXP)
gamma-tocopherol  (ISO)
gefitinib  (EXP)
genistein  (EXP)
glucose  (ISO)
hydrogen peroxide  (EXP)
Lasiocarpine  (EXP)
lead diacetate  (ISO)
leflunomide  (EXP)
lucanthone  (EXP)
melphalan  (ISO)
methotrexate  (EXP)
methyl isocyanate  (ISO)
methyl methanesulfonate  (EXP)
methylseleninic acid  (EXP)
mitomycin C  (ISO)
monocrotaline  (EXP)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (EXP)
N-methyl-N-nitrosourea  (EXP,ISO)
N-nitrosodiethylamine  (ISO)
N-Nitrosopyrrolidine  (EXP)
naphthalene  (ISO)
nickel atom  (EXP)
nickel dichloride  (ISO)
nocodazole  (EXP)
O-methyleugenol  (EXP,ISO)
ochratoxin A  (ISO)
oxaliplatin  (EXP,ISO)
ozone  (EXP,ISO)
p-chloromercuribenzoic acid  (EXP)
paclitaxel  (EXP)
palbociclib  (EXP)
paracetamol  (EXP,ISO)
paraquat  (ISO)
PCB138  (ISO)
perfluorononanoic acid  (EXP)
phenethyl isothiocyanate  (EXP)
phenobarbital  (ISO)
phenylmercury acetate  (EXP)
phorbol 13-acetate 12-myristate  (EXP)
pirinixic acid  (ISO)
piroxicam  (EXP)
potassium chromate  (EXP)
progesterone  (EXP,ISO)
promethazine  (ISO)
propiconazole  (ISO)
pyrimidines  (EXP)
quercetin  (EXP)
quinazolines  (EXP)
raloxifene  (EXP)
resveratrol  (EXP)
riddelliine  (EXP)
SB 431542  (EXP)
silicon dioxide  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
silver(1+) nitrate  (EXP)
simvastatin  (EXP)
sodium arsenite  (EXP,ISO)
Soman  (ISO)
sulforaphane  (EXP)
sulindac  (EXP)
sulindac sulfide  (EXP)
sunitinib  (EXP)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP)
tetrachloromethane  (ISO)
thalidomide  (EXP)
thioacetamide  (ISO)
titanium dioxide  (ISO)
tocopherol  (ISO)
topotecan  (ISO)
trichloroethene  (ISO)
trichostatin A  (EXP)
triclosan  (EXP)
trimellitic anhydride  (ISO)
tungsten  (ISO)
tunicamycin  (EXP)
valproic acid  (EXP,ISO)
vincristine  (EXP)
zinc atom  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
anterior/posterior axis specification  (IEA,ISO)
cell division  (IEA)
centrosome cycle  (ISO)
centrosome localization  (IEA,ISO)
G2/M transition of mitotic cell cycle  (TAS)
histone-serine phosphorylation  (IEA)
liver regeneration  (IDA)
meiotic cell cycle  (ISO)
meiotic spindle organization  (ISO)
microtubule cytoskeleton organization  (ISO)
mitotic cell cycle  (ISO,TAS)
mitotic centrosome separation  (IEA,ISO)
mitotic spindle organization  (IBA,ISO)
negative regulation of apoptotic process  (IEA,ISO)
negative regulation of gene expression  (IMP)
negative regulation of protein binding  (IDA)
neuron projection extension  (IEA,ISO)
peptidyl-serine phosphorylation  (IMP)
positive regulation of meiotic cell cycle process involved in oocyte maturation  (ISO)
positive regulation of mitochondrial fission  (IMP)
positive regulation of mitotic nuclear division  (TAS)
positive regulation of oocyte maturation  (IEA,ISO)
positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (IEA,ISO)
positive regulation of translation  (ISO)
protein autophosphorylation  (TAS)
protein localization to centrosome  (IEA,ISO)
protein phosphorylation  (IDA,IEA,ISO)
regulation of centrosome cycle  (TAS)
regulation of cytokinesis  (IBA)
regulation of G2/M transition of mitotic cell cycle  (TAS)
regulation of protein stability  (IMP)
regulation of signal transduction by p53 class mediator  (TAS)
response to estradiol  (ISO)
response to wounding  (IDA)
spindle assembly involved in female meiosis I  (IEA,ISO)
spindle organization  (IMP)

Cellular Component

References

Additional References at PubMed
PMID:9153231   PMID:9174055   PMID:9514916   PMID:9605851   PMID:9771714   PMID:10377410   PMID:11039908   PMID:11050385   PMID:11076863   PMID:11256614   PMID:11413462   PMID:11551964  
PMID:11780052   PMID:11784863   PMID:11790771   PMID:11847097   PMID:11903063   PMID:11976319   PMID:12177045   PMID:12198151   PMID:12237287   PMID:12244051   PMID:12354758   PMID:12467573  
PMID:12477932   PMID:12490715   PMID:12559175   PMID:12631597   PMID:12684414   PMID:12693093   PMID:12716366   PMID:12833450   PMID:12881723   PMID:12883693   PMID:12927815   PMID:13678575  
PMID:13678582   PMID:14580337   PMID:14600264   PMID:14602875   PMID:14603251   PMID:14667408   PMID:14692019   PMID:14702041   PMID:14744757   PMID:15041727   PMID:15064709   PMID:15078988  
PMID:15087379   PMID:15128871   PMID:15147269   PMID:15173575   PMID:15190214   PMID:15271853   PMID:15271856   PMID:15289843   PMID:15342556   PMID:15469940   PMID:15489334   PMID:15489336  
PMID:15504738   PMID:15534106   PMID:15536123   PMID:15592510   PMID:15598762   PMID:15688402   PMID:15749021   PMID:15793587   PMID:15802297   PMID:15839305   PMID:15860351   PMID:15867347  
PMID:15880741   PMID:15944763   PMID:15966895   PMID:15987997   PMID:16011022   PMID:16049965   PMID:16080195   PMID:16082213   PMID:16158051   PMID:16332542   PMID:16337122   PMID:16377583  
PMID:16381901   PMID:16411056   PMID:16412566   PMID:16572587   PMID:16574658   PMID:16712791   PMID:16767676   PMID:16772293   PMID:16849685   PMID:16860930   PMID:16890155   PMID:16894566  
PMID:16912073   PMID:16951231   PMID:17003782   PMID:17018785   PMID:17060341   PMID:17060449   PMID:17102620   PMID:17113223   PMID:17120309   PMID:17125279   PMID:17143471   PMID:17219423  
PMID:17229885   PMID:17333265   PMID:17353931   PMID:17390048   PMID:17433255   PMID:17438137   PMID:17441355   PMID:17441356   PMID:17452972   PMID:17457043   PMID:17488622   PMID:17505013  
PMID:17563743   PMID:17591802   PMID:17604723   PMID:17627006   PMID:17634283   PMID:17634533   PMID:17634535   PMID:17673924   PMID:17686574   PMID:17705509   PMID:17726514   PMID:17786310  
PMID:17850717   PMID:17851643   PMID:17898866   PMID:17908995   PMID:17909067   PMID:17914111   PMID:17925329   PMID:17926144   PMID:17935280   PMID:17939994   PMID:17940067   PMID:17957726  
PMID:17974987   PMID:18019715   PMID:18027856   PMID:18043979   PMID:18284933   PMID:18311783   PMID:18321990   PMID:18353975   PMID:18361427   PMID:18361916   PMID:18372918   PMID:18390187  
PMID:18391981   PMID:18431743   PMID:18434591   PMID:18466087   PMID:18469155   PMID:18521620   PMID:18562694   PMID:18566290   PMID:18592005   PMID:18615013   PMID:18628459   PMID:18641684  
PMID:18662907   PMID:18663142   PMID:18663358   PMID:18667445   PMID:18669163   PMID:18676680   PMID:18707550   PMID:18708766   PMID:18773538   PMID:18790738   PMID:18802780   PMID:18803637  
PMID:18812553   PMID:18815537   PMID:18823025   PMID:18854777   PMID:18931650   PMID:19001879   PMID:19028417   PMID:19059698   PMID:19060929   PMID:19074838   PMID:19111882   PMID:19117984  
PMID:19124506   PMID:19157502   PMID:19170196   PMID:19182791   PMID:19197335   PMID:19204928   PMID:19232520   PMID:19306133   PMID:19351716   PMID:19357306   PMID:19412426   PMID:19435814  
PMID:19440020   PMID:19487276   PMID:19494039   PMID:19550118   PMID:19551141   PMID:19564927   PMID:19616898   PMID:19625176   PMID:19648887   PMID:19649632   PMID:19652203   PMID:19671766  
PMID:19672706   PMID:19690970   PMID:19692168   PMID:19696028   PMID:19738056   PMID:19774610   PMID:19799648   PMID:19801554   PMID:19812038   PMID:19821797   PMID:19822419   PMID:19874801  
PMID:19891769   PMID:19901077   PMID:19954064   PMID:19997598   PMID:20002563   PMID:20003375   PMID:20043089   PMID:20160025   PMID:20168084   PMID:20182874   PMID:20182906   PMID:20189840  
PMID:20301390   PMID:20360068   PMID:20368716   PMID:20371132   PMID:20373286   PMID:20379614   PMID:20382844   PMID:20444701   PMID:20453000   PMID:20459534   PMID:20460379   PMID:20464476  
PMID:20467437   PMID:20531406   PMID:20585902   PMID:20593995   PMID:20596670   PMID:20598352   PMID:20603326   PMID:20629650   PMID:20643351   PMID:20682043   PMID:20708655   PMID:20732714  
PMID:20819778   PMID:20854072   PMID:20865660   PMID:20922573   PMID:20929925   PMID:20960027   PMID:21045147   PMID:21050672   PMID:21052088   PMID:21059223   PMID:21072059   PMID:21081503  
PMID:21097701   PMID:21099343   PMID:21116854   PMID:21147853   PMID:21163064   PMID:21187329   PMID:21198377   PMID:21242313   PMID:21244100   PMID:21247708   PMID:21300005   PMID:21347367  
PMID:21399614   PMID:21410931   PMID:21412660   PMID:21441901   PMID:21470402   PMID:21472690   PMID:21479365   PMID:21554500   PMID:21584819   PMID:21589936   PMID:21590355   PMID:21598251  
PMID:21600873   PMID:21617231   PMID:21623171   PMID:21670214   PMID:21705324   PMID:21718475   PMID:21731694   PMID:21761334   PMID:21761347   PMID:21774789   PMID:21807936   PMID:21820309  
PMID:21821029   PMID:21822051   PMID:21822277   PMID:21829699   PMID:21832049   PMID:21840910   PMID:21873635   PMID:21874044   PMID:21890637   PMID:21978935   PMID:22011530   PMID:22014574  
PMID:22016509   PMID:22094468   PMID:22110403   PMID:22116466   PMID:22207630   PMID:22213102   PMID:22214762   PMID:22222631   PMID:22240781   PMID:22246202   PMID:22262852   PMID:22302096  
PMID:22305495   PMID:22306998   PMID:22320980   PMID:22323290   PMID:22340593   PMID:22350409   PMID:22396649   PMID:22451695   PMID:22463590   PMID:22483753   PMID:22492986   PMID:22513362  
PMID:22522455   PMID:22588468   PMID:22617334   PMID:22621899   PMID:22753416   PMID:22809428   PMID:22864622   PMID:22894933   PMID:22899799   PMID:22939629   PMID:22940834   PMID:23026799  
PMID:23037716   PMID:23047430   PMID:23047923   PMID:23075505   PMID:23092930   PMID:23097092   PMID:23114921   PMID:23151618   PMID:23186136   PMID:23201157   PMID:23204235   PMID:23213400  
PMID:23219753   PMID:23255113   PMID:23273898   PMID:23317189   PMID:23319376   PMID:23322625   PMID:23328114   PMID:23333597   PMID:23334326   PMID:23334327   PMID:23358695   PMID:23411487  
PMID:23443559   PMID:23446853   PMID:23481312   PMID:23520446   PMID:23539442   PMID:23547029   PMID:23602568   PMID:23610398   PMID:23627634   PMID:23648710   PMID:23649807   PMID:23661421  
PMID:23686525   PMID:23695679   PMID:23761169   PMID:23785518   PMID:23787073   PMID:23788275   PMID:23792191   PMID:23803310   PMID:23808327   PMID:23821772   PMID:23829974   PMID:23848594  
PMID:23887685   PMID:23912711   PMID:23925655   PMID:23934627   PMID:23962557   PMID:23963785   PMID:23966163   PMID:23970419   PMID:23974204   PMID:23991974   PMID:23993973   PMID:24104968  
PMID:24166501   PMID:24184958   PMID:24240108   PMID:24252226   PMID:24255178   PMID:24273164   PMID:24338364   PMID:24349361   PMID:24412244   PMID:24452445   PMID:24480460   PMID:24488334  
PMID:24499673   PMID:24562316   PMID:24574519   PMID:24598702   PMID:24613305   PMID:24620973   PMID:24631181   PMID:24632603   PMID:24680704   PMID:24682789   PMID:24683001   PMID:24756216  
PMID:24775809   PMID:24778030   PMID:24810160   PMID:24816249   PMID:24847103   PMID:24857377   PMID:24867643   PMID:24874015   PMID:24875404   PMID:24876664   PMID:24930769   PMID:24943686  
PMID:24953013   PMID:24976383   PMID:24996188   PMID:25002679   PMID:25009111   PMID:25061104   PMID:25082261   PMID:25115395   PMID:25124567   PMID:25128228   PMID:25154511   PMID:25169513  
PMID:25175806   PMID:25183163   PMID:25217103   PMID:25268132   PMID:25284017   PMID:25288231   PMID:25297850   PMID:25313256   PMID:25328151   PMID:25362855   PMID:25366143   PMID:25369539  
PMID:25395580   PMID:25436453   PMID:25450266   PMID:25463638   PMID:25501809   PMID:25547434   PMID:25595275   PMID:25596657   PMID:25609923   PMID:25624750   PMID:25625960   PMID:25632068  
PMID:25634113   PMID:25640309   PMID:25657325   PMID:25667100   PMID:25697104   PMID:25749384   PMID:25760707   PMID:25789545   PMID:25807528   PMID:25830658   PMID:25848977   PMID:25852190  
PMID:25872528   PMID:25882311   PMID:25924824   PMID:25986610   PMID:25987563   PMID:26044736   PMID:26073352   PMID:26124292   PMID:26138431   PMID:26141684   PMID:26186194   PMID:26235926  
PMID:26259750   PMID:26344197   PMID:26387737   PMID:26406118   PMID:26406304   PMID:26423403   PMID:26443806   PMID:26446837   PMID:26481147   PMID:26496610   PMID:26497206   PMID:26516156  
PMID:26569382   PMID:26607113   PMID:26616283   PMID:26638075   PMID:26660542   PMID:26673895   PMID:26713495   PMID:26777301   PMID:26778597   PMID:26808391   PMID:26825399   PMID:26831064  
PMID:26832443   PMID:26842935   PMID:26878753   PMID:26880200   PMID:26884555   PMID:26925658   PMID:26962685   PMID:26972000   PMID:26997271   PMID:27003257   PMID:27091106   PMID:27102712  
PMID:27114546   PMID:27125974   PMID:27138904   PMID:27152455   PMID:27192185   PMID:27209210   PMID:27213815   PMID:27233613   PMID:27242098   PMID:27249336   PMID:27270838   PMID:27278006  
PMID:27293189   PMID:27329586   PMID:27335426   PMID:27341528   PMID:27356739   PMID:27373675   PMID:27398318   PMID:27432908   PMID:27466490   PMID:27502708   PMID:27571708   PMID:27593935  
PMID:27609421   PMID:27624071   PMID:27721411   PMID:27728805   PMID:27764771   PMID:27775325   PMID:27837025   PMID:27910998   PMID:27926875   PMID:28017898   PMID:28069801   PMID:28073841  
PMID:28079881   PMID:28114281   PMID:28114286   PMID:28152093   PMID:28155045   PMID:28167680   PMID:28177880   PMID:28188776   PMID:28193222   PMID:28202658   PMID:28205554   PMID:28205582  
PMID:28209614   PMID:28218735   PMID:28242198   PMID:28260026   PMID:28269749   PMID:28269755   PMID:28322787   PMID:28342286   PMID:28393219   PMID:28404933   PMID:28442587   PMID:28465536  
PMID:28514442   PMID:28515276   PMID:28536143   PMID:28595628   PMID:28628118   PMID:28647900   PMID:28675297   PMID:28764929   PMID:28843004   PMID:28847989   PMID:28855673   PMID:28869599  
PMID:28869606   PMID:28884479   PMID:28906374   PMID:28949095   PMID:28967900   PMID:28986522   PMID:29074706   PMID:29122619   PMID:29126912   PMID:29141582   PMID:29187526   PMID:29283376  
PMID:29333101   PMID:29387948   PMID:29465396   PMID:29472726   PMID:29477140   PMID:29512701   PMID:29515234   PMID:29555820   PMID:29571950   PMID:29654398   PMID:29678897   PMID:29682829  
PMID:29760389   PMID:29760449   PMID:29764989   PMID:29844126   PMID:29845253   PMID:29899121   PMID:29973362   PMID:30013101   PMID:30013191   PMID:30018032   PMID:30027525   PMID:30033366  
PMID:30070631   PMID:30082913   PMID:30097580   PMID:30108183   PMID:30177840   PMID:30200102   PMID:30232224   PMID:30250993   PMID:30344098   PMID:30431113   PMID:30454901   PMID:30478424  
PMID:30485161   PMID:30498084   PMID:30538148   PMID:30547784   PMID:30588191   PMID:30602538   PMID:30713094   PMID:30734057   PMID:30804502   PMID:30944388   PMID:30985952   PMID:31091453  
PMID:31122263   PMID:31173299   PMID:31174434   PMID:31186254   PMID:31239342   PMID:31296571   PMID:31314582   PMID:31322223   PMID:31359594   PMID:31376425   PMID:31391550   PMID:31485600  
PMID:31521144   PMID:31527615   PMID:31562563   PMID:31570091   PMID:31597600   PMID:31665313   PMID:31676293   PMID:31703572   PMID:31704824   PMID:31740746   PMID:31823729   PMID:31875524  
PMID:31888889   PMID:31894274   PMID:31904830   PMID:31911485   PMID:32004564   PMID:32033228   PMID:32076268   PMID:32193808   PMID:32287321   PMID:32323809   PMID:32348467   PMID:32390596  
PMID:32416067   PMID:32452402   PMID:32469983   PMID:32550913   PMID:32652013   PMID:32694731   PMID:32705157   PMID:32789689   PMID:32851091   PMID:33011219   PMID:33037191   PMID:33086033  
PMID:33123754   PMID:33158056   PMID:33172929   PMID:33277547   PMID:33545203   PMID:33771996   PMID:34079125  


Genomics

Comparative Map Data
AURKA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2056,369,389 - 56,392,337 (-)EnsemblGRCh38hg38GRCh38
GRCh382056,369,390 - 56,392,308 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372054,944,446 - 54,967,271 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362054,377,852 - 54,400,758 (-)NCBINCBI36hg18NCBI36
Celera2051,683,792 - 51,707,784 (-)NCBI
Cytogenetic Map20q13.2NCBI
HuRef2051,729,262 - 51,752,229 (-)NCBIHuRef
CHM1_12054,845,539 - 54,868,444 (-)NCBICHM1_1
Aurka
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392172,198,110 - 172,212,820 (-)NCBIGRCm39mm39
GRCm39 Ensembl2172,198,110 - 172,212,455 (-)Ensembl
GRCm382172,356,190 - 172,370,886 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2172,356,190 - 172,370,535 (-)EnsemblGRCm38mm10GRCm38
MGSCv372172,181,696 - 172,196,006 (-)NCBIGRCm37mm9NCBIm37
MGSCv362172,047,401 - 172,061,711 (-)NCBImm8
Celera2178,315,373 - 178,329,688 (-)NCBICelera
Cytogenetic Map2H3NCBI
cM Map294.84NCBI
Aurka
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.23161,128,309 - 161,144,524 (-)NCBI
Rnor_6.0 Ensembl3170,364,181 - 170,378,210 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.03170,364,177 - 170,380,278 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03176,437,310 - 176,456,036 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43163,270,479 - 163,284,506 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13163,177,671 - 163,190,537 (-)NCBI
Celera3160,328,562 - 160,342,589 (-)NCBICelera
Cytogenetic Map3q42NCBI
Aurka
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554452,831,157 - 2,853,357 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554452,831,073 - 2,853,151 (+)NCBIChiLan1.0ChiLan1.0
AURKA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12053,994,880 - 54,017,381 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2053,994,881 - 54,017,339 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02052,707,757 - 52,730,579 (-)NCBIMhudiblu_PPA_v0panPan3
AURKA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12441,585,483 - 41,604,875 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2441,585,518 - 41,604,791 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2440,833,209 - 40,852,906 (-)NCBI
ROS_Cfam_1.02442,296,241 - 42,316,154 (-)NCBI
UMICH_Zoey_3.12441,536,239 - 41,555,929 (-)NCBI
UNSW_CanFamBas_1.02441,675,064 - 41,694,968 (-)NCBI
UU_Cfam_GSD_1.02442,333,178 - 42,352,923 (-)NCBI
Aurka
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640183,775,540 - 183,790,540 (+)NCBI
SpeTri2.0NW_004936875295,238 - 310,457 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AURKA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11756,954,838 - 56,972,435 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21764,066,378 - 64,083,673 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AURKA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.127,730,060 - 7,753,167 (+)NCBI
ChlSab1.1 Ensembl27,734,128 - 7,752,395 (+)Ensembl
Vero_WHO_p1.0NW_02366605055,804,778 - 55,827,848 (+)NCBI
Aurka
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624790143,818 - 162,065 (+)NCBI

Position Markers
RH80570  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372054,947,340 - 54,947,587UniSTSGRCh37
Build 362054,380,747 - 54,380,994RGDNCBI36
Celera2051,686,687 - 51,686,934RGD
Cytogenetic Map20q13UniSTS
HuRef2051,732,157 - 51,732,404UniSTS
GeneMap99-GB4 RH Map20335.45UniSTS
RH12027  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372054,944,528 - 54,944,682UniSTSGRCh37
Build 362054,377,935 - 54,378,089RGDNCBI36
Celera2051,683,875 - 51,684,029RGD
Cytogenetic Map20q13UniSTS
HuRef2051,729,345 - 51,729,499UniSTS
GeneMap99-GB4 RH Map20335.45UniSTS
NCBI RH Map20583.1UniSTS
SHGC-53807  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371220,439,892 - 220,440,110UniSTSGRCh37
GRCh372054,945,058 - 54,945,278UniSTSGRCh37
Build 361218,506,515 - 218,506,733RGDNCBI36
Celera1193,659,101 - 193,659,319RGD
Celera2051,684,405 - 51,684,625UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map20q13UniSTS
HuRef1191,114,323 - 191,114,541UniSTS
HuRef2051,729,875 - 51,730,095UniSTS
D1S1423  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map6p22.3-p21.32UniSTS
Cytogenetic Map6q22.33UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map7q11.2UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map9q12UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map18q22.1UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map10p14-p13UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map11q23-q24UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map22cen-q12.3UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map15q11.2-q21.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map4q28UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map1q41-q42UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map12p13.1-p12.3UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map11q24.1UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map3q13UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map7p21.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map1q42.1UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map12q24.2UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map8p23-p22UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map10p12.33UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map3q26UniSTS
Cytogenetic Map9p21.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic MapXq27.2UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map4q31UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q24.3UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map11q22.1UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map20q11.21-q11.23UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map21p11.1UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map14q32.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map4q31.23UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2p22.3UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map13q33.3UniSTS
Cytogenetic Map15q22-q24UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map4p15.31UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map20q13.1UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map15q22.1-q22.31UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map4q24UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map3p21.1-p14.2UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map6q24.2UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map10pter-q25.3UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map6p22.2UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map16p13UniSTS
Cytogenetic Map15q26UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map4p15.1-p14UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map7q32.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map3q21-q24UniSTS
Cytogenetic Map4q13UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map1q31UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map8q24.12UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map6q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map20pter-p12UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map14q22.2UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map6p22-p21UniSTS
Cytogenetic Map17q21.1-q21.3UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12p13.2-p12.3UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map5q22.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map4p15.3UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map18q12.2UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map10q22.3-q23.2UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map3q12.1UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map2p13.2UniSTS
Cytogenetic Map3p12.3UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map3q11.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map6p24.2UniSTS
Cytogenetic Map20q13.33UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3670
Count of miRNA genes:809
Interacting mature miRNAs:899
Transcripts:ENST00000312783, ENST00000347343, ENST00000371356, ENST00000395907, ENST00000395909, ENST00000395911, ENST00000395913, ENST00000395914, ENST00000395915, ENST00000420474, ENST00000422322, ENST00000441357, ENST00000451915, ENST00000456249
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 320 27 134 119 717 122 334 96 120 99 715 312 10 1 38 4
Low 2056 2700 1524 481 1153 323 3938 1980 3076 315 718 1284 161 1 1170 2679 2 2
Below cutoff 63 264 68 24 81 20 84 121 538 5 25 17 4 33 71

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_012133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001323303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001323304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001323305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_003600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_198433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_198434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_198435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_198436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_198437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017028034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017028035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024451974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF008551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF011467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF011468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH009111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK301769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK312776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL121914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL711075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC001280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF029182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM458030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP224535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ435059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU171303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU542363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB113289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB138172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D84212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000312783   ⟹   ENSP00000321591
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,369,390 - 56,392,295 (-)Ensembl
RefSeq Acc Id: ENST00000347343   ⟹   ENSP00000216911
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,369,390 - 56,392,205 (-)Ensembl
RefSeq Acc Id: ENST00000371356   ⟹   ENSP00000360407
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,369,390 - 56,392,196 (-)Ensembl
RefSeq Acc Id: ENST00000395907   ⟹   ENSP00000379243
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,369,665 - 56,392,215 (-)Ensembl
RefSeq Acc Id: ENST00000395911   ⟹   ENSP00000379247
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,369,390 - 56,392,215 (-)Ensembl
RefSeq Acc Id: ENST00000395913   ⟹   ENSP00000379249
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,369,390 - 56,392,337 (-)Ensembl
RefSeq Acc Id: ENST00000395914   ⟹   ENSP00000379250
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,369,389 - 56,392,295 (-)Ensembl
RefSeq Acc Id: ENST00000395915   ⟹   ENSP00000379251
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,369,390 - 56,392,296 (-)Ensembl
RefSeq Acc Id: ENST00000420474   ⟹   ENSP00000388073
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,382,985 - 56,392,267 (-)Ensembl
RefSeq Acc Id: ENST00000422322   ⟹   ENSP00000405042
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,383,111 - 56,392,131 (-)Ensembl
RefSeq Acc Id: ENST00000441357   ⟹   ENSP00000393452
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,373,448 - 56,392,215 (-)Ensembl
RefSeq Acc Id: ENST00000451915   ⟹   ENSP00000401358
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,386,337 - 56,392,202 (-)Ensembl
RefSeq Acc Id: ENST00000456249   ⟹   ENSP00000405170
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl2056,386,257 - 56,392,220 (-)Ensembl
RefSeq Acc Id: NM_001323303   ⟹   NP_001310232
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,369,390 - 56,392,215 (-)NCBI
CHM1_12054,845,539 - 54,868,486 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001323304   ⟹   NP_001310233
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,369,390 - 56,392,215 (-)NCBI
CHM1_12054,845,539 - 54,868,486 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001323305   ⟹   NP_001310234
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,369,390 - 56,392,215 (-)NCBI
CHM1_12054,845,539 - 54,868,486 (-)NCBI
Sequence:
RefSeq Acc Id: NM_003600   ⟹   NP_003591
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,369,390 - 56,392,215 (-)NCBI
GRCh372054,944,445 - 54,967,351 (-)ENTREZGENE
Build 362054,377,852 - 54,400,758 (-)NCBI Archive
HuRef2051,729,262 - 51,752,229 (-)ENTREZGENE
CHM1_12054,845,539 - 54,868,486 (-)NCBI
Sequence:
RefSeq Acc Id: NM_198433   ⟹   NP_940835
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,369,390 - 56,392,215 (-)NCBI
GRCh372054,944,445 - 54,967,351 (-)ENTREZGENE
Build 362054,377,852 - 54,400,758 (-)NCBI Archive
HuRef2051,729,262 - 51,752,229 (-)ENTREZGENE
CHM1_12054,845,539 - 54,868,486 (-)NCBI
Sequence:
RefSeq Acc Id: NM_198434   ⟹   NP_940836
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,369,390 - 56,392,215 (-)NCBI
GRCh372054,944,445 - 54,967,351 (-)ENTREZGENE
Build 362054,377,852 - 54,400,758 (-)NCBI Archive
HuRef2051,729,262 - 51,752,229 (-)ENTREZGENE
CHM1_12054,845,539 - 54,868,486 (-)NCBI
Sequence:
RefSeq Acc Id: NM_198435   ⟹   NP_940837
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,369,390 - 56,392,215 (-)NCBI
GRCh372054,944,445 - 54,967,351 (-)ENTREZGENE
Build 362054,377,852 - 54,400,758 (-)NCBI Archive
HuRef2051,729,262 - 51,752,229 (-)ENTREZGENE
CHM1_12054,845,539 - 54,868,486 (-)NCBI
Sequence:
RefSeq Acc Id: NM_198436   ⟹   NP_940838
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,369,390 - 56,392,215 (-)NCBI
GRCh372054,944,445 - 54,967,351 (-)ENTREZGENE
Build 362054,377,852 - 54,400,758 (-)NCBI Archive
HuRef2051,729,262 - 51,752,229 (-)ENTREZGENE
CHM1_12054,845,539 - 54,868,486 (-)NCBI
Sequence:
RefSeq Acc Id: NM_198437   ⟹   NP_940839
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,369,390 - 56,392,215 (-)NCBI
GRCh372054,944,445 - 54,967,351 (-)ENTREZGENE
Build 362054,377,852 - 54,400,758 (-)NCBI Archive
HuRef2051,729,262 - 51,752,229 (-)ENTREZGENE
CHM1_12054,845,539 - 54,868,486 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017028034   ⟹   XP_016883523
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,369,390 - 56,392,308 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017028035   ⟹   XP_016883524
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,369,390 - 56,391,875 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024451974   ⟹   XP_024307742
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,369,390 - 56,392,308 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001310232 (Get FASTA)   NCBI Sequence Viewer  
  NP_001310233 (Get FASTA)   NCBI Sequence Viewer  
  NP_001310234 (Get FASTA)   NCBI Sequence Viewer  
  NP_003591 (Get FASTA)   NCBI Sequence Viewer  
  NP_940835 (Get FASTA)   NCBI Sequence Viewer  
  NP_940836 (Get FASTA)   NCBI Sequence Viewer  
  NP_940837 (Get FASTA)   NCBI Sequence Viewer  
  NP_940838 (Get FASTA)   NCBI Sequence Viewer  
  NP_940839 (Get FASTA)   NCBI Sequence Viewer  
  XP_016883523 (Get FASTA)   NCBI Sequence Viewer  
  XP_016883524 (Get FASTA)   NCBI Sequence Viewer  
  XP_024307742 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC12708 (Get FASTA)   NCBI Sequence Viewer  
  AAC23448 (Get FASTA)   NCBI Sequence Viewer  
  AAC63902 (Get FASTA)   NCBI Sequence Viewer  
  AAF29508 (Get FASTA)   NCBI Sequence Viewer  
  AAH01280 (Get FASTA)   NCBI Sequence Viewer  
  AAH02499 (Get FASTA)   NCBI Sequence Viewer  
  AAH06423 (Get FASTA)   NCBI Sequence Viewer  
  AAH27464 (Get FASTA)   NCBI Sequence Viewer  
  BAA23592 (Get FASTA)   NCBI Sequence Viewer  
  BAG35640 (Get FASTA)   NCBI Sequence Viewer  
  BAG63228 (Get FASTA)   NCBI Sequence Viewer  
  EAW75550 (Get FASTA)   NCBI Sequence Viewer  
  EAW75551 (Get FASTA)   NCBI Sequence Viewer  
  EAW75552 (Get FASTA)   NCBI Sequence Viewer  
  EAW75553 (Get FASTA)   NCBI Sequence Viewer  
  EAW75554 (Get FASTA)   NCBI Sequence Viewer  
  EAW75555 (Get FASTA)   NCBI Sequence Viewer  
  EAW75556 (Get FASTA)   NCBI Sequence Viewer  
  EAW75557 (Get FASTA)   NCBI Sequence Viewer  
  EAW75558 (Get FASTA)   NCBI Sequence Viewer  
  EAW75559 (Get FASTA)   NCBI Sequence Viewer  
  EAW75560 (Get FASTA)   NCBI Sequence Viewer  
  EAW75561 (Get FASTA)   NCBI Sequence Viewer  
  EAW75562 (Get FASTA)   NCBI Sequence Viewer  
  O14965 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_940839   ⟸   NM_198437
- UniProtKB: O14965 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_940838   ⟸   NM_198436
- UniProtKB: O14965 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_940837   ⟸   NM_198435
- UniProtKB: O14965 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_940836   ⟸   NM_198434
- UniProtKB: O14965 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_003591   ⟸   NM_003600
- UniProtKB: O14965 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_940835   ⟸   NM_198433
- UniProtKB: O14965 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001310233   ⟸   NM_001323304
- UniProtKB: O14965 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001310234   ⟸   NM_001323305
- UniProtKB: O14965 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001310232   ⟸   NM_001323303
- UniProtKB: O14965 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016883523   ⟸   XM_017028034
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_016883524   ⟸   XM_017028035
- Peptide Label: isoform X2
- UniProtKB: O14965 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_024307742   ⟸   XM_024451974
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSP00000360407   ⟸   ENST00000371356
RefSeq Acc Id: ENSP00000216911   ⟸   ENST00000347343
RefSeq Acc Id: ENSP00000401358   ⟸   ENST00000451915
RefSeq Acc Id: ENSP00000393452   ⟸   ENST00000441357
RefSeq Acc Id: ENSP00000405170   ⟸   ENST00000456249
RefSeq Acc Id: ENSP00000321591   ⟸   ENST00000312783
RefSeq Acc Id: ENSP00000388073   ⟸   ENST00000420474
RefSeq Acc Id: ENSP00000379243   ⟸   ENST00000395907
RefSeq Acc Id: ENSP00000379251   ⟸   ENST00000395915
RefSeq Acc Id: ENSP00000379249   ⟸   ENST00000395913
RefSeq Acc Id: ENSP00000379250   ⟸   ENST00000395914
RefSeq Acc Id: ENSP00000379247   ⟸   ENST00000395911
RefSeq Acc Id: ENSP00000405042   ⟸   ENST00000422322
Protein Domains
Protein kinase

Promoters
RGD ID:6798533
Promoter ID:HG_KWN:39898
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000395907,   ENST00000395913,   NM_001033521,   NM_001033522,   NM_003600,   NM_198433,   NM_198434,   NM_198436,   OTTHUMT00000079794,   OTTHUMT00000079795,   OTTHUMT00000079796,   OTTHUMT00000079797,   OTTHUMT00000079798,   OTTHUMT00000079805,   OTTHUMT00000079806,   OTTHUMT00000079810,   OTTHUMT00000079811,   OTTHUMT00000079812,   OTTHUMT00000259431,   OTTHUMT00000259439,   UC002XXJ.1,   UC002XXK.1,   UC002XXO.1
Position:
Human AssemblyChrPosition (strand)Source
Build 362054,399,766 - 54,401,182 (-)MPROMDB
RGD ID:13602152
Promoter ID:EPDNEW_H27260
Type:initiation region
Name:AURKA_1
Description:aurora kinase A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H27261  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,392,215 - 56,392,275EPDNEW
RGD ID:13602154
Promoter ID:EPDNEW_H27261
Type:initiation region
Name:AURKA_2
Description:aurora kinase A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H27260  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382056,392,362 - 56,392,422EPDNEW

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_198437.3(AURKA):c.91T>A (p.Phe31Ile) single nucleotide variant Colon cancer, susceptibility to [RCV000007021] Chr20:56386485 [GRCh38]
Chr20:54961541 [GRCh37]
Chr20:20q13.2
risk factor
GRCh38/hg38 20q13.12-13.33(chr20:44787704-64277321)x3 copy number gain See cases [RCV000053035] Chr20:44787704..64277321 [GRCh38]
Chr20:43416345..62908674 [GRCh37]
Chr20:42849759..62379118 [NCBI36]
Chr20:20q13.12-13.33
pathogenic
GRCh38/hg38 20p13-q13.33(chr20:99557-64277321)x3 copy number gain See cases [RCV000135859] Chr20:99557..64277321 [GRCh38]
Chr20:80198..62908674 [GRCh37]
Chr20:28198..62379118 [NCBI36]
Chr20:20p13-q13.33
pathogenic
GRCh38/hg38 20q13.2-13.33(chr20:55630597-60941207)x3 copy number gain See cases [RCV000135622] Chr20:55630597..60941207 [GRCh38]
Chr20:54220678..59516263 [GRCh37]
Chr20:53639062..58949658 [NCBI36]
Chr20:20q13.2-13.33
likely pathogenic
GRCh38/hg38 20q13.2-13.33(chr20:56198032-64277321)x3 copy number gain See cases [RCV000138035] Chr20:56198032..64277321 [GRCh38]
Chr20:54773088..62908674 [GRCh37]
Chr20:54206495..62379118 [NCBI36]
Chr20:20q13.2-13.33
pathogenic
GRCh38/hg38 20q13.2-13.32(chr20:54594888-58190583)x1 copy number loss See cases [RCV000141033] Chr20:54594888..58190583 [GRCh38]
Chr20:53211427..56765639 [GRCh37]
Chr20:52644834..56199045 [NCBI36]
Chr20:20q13.2-13.32
pathogenic
GRCh38/hg38 20q13.2-13.33(chr20:53236165-64284202)x3 copy number gain See cases [RCV000143584] Chr20:53236165..64284202 [GRCh38]
Chr20:51852704..62915555 [GRCh37]
Chr20:51286111..62385999 [NCBI36]
Chr20:20q13.2-13.33
likely pathogenic
GRCh37/hg19 20q13.2-13.33(chr20:51542616-62915555)x3 copy number gain See cases [RCV000511980] Chr20:51542616..62915555 [GRCh37]
Chr20:20q13.2-13.33
likely pathogenic
GRCh37/hg19 20p13-q13.33(chr20:61569-62915555)x3 copy number gain See cases [RCV000510832] Chr20:61569..62915555 [GRCh37]
Chr20:20p13-q13.33
pathogenic
GRCh37/hg19 20q13.2-13.31(chr20:54541125-55162415)x3 copy number gain See cases [RCV000511263] Chr20:54541125..55162415 [GRCh37]
Chr20:20q13.2-13.31
uncertain significance
GRCh37/hg19 20p13-q13.33(chr20:61569-62915555) copy number gain See cases [RCV000512450] Chr20:61569..62915555 [GRCh37]
Chr20:20p13-q13.33
pathogenic
GRCh37/hg19 20p13-q13.33(chr20:63244-62961294)x3 copy number gain not provided [RCV000741059] Chr20:63244..62961294 [GRCh37]
Chr20:20p13-q13.33
pathogenic
GRCh37/hg19 20p13-q13.33(chr20:63244-62912463)x3 copy number gain not provided [RCV000741057] Chr20:63244..62912463 [GRCh37]
Chr20:20p13-q13.33
pathogenic
GRCh37/hg19 20p13-q13.33(chr20:63244-62948788)x3 copy number gain not provided [RCV000741058] Chr20:63244..62948788 [GRCh37]
Chr20:20p13-q13.33
pathogenic
NM_198437.3(AURKA):c.1038C>A (p.Phe346Leu) single nucleotide variant Multiple myeloma [RCV000984118] Chr20:56370332 [GRCh38]
Chr20:54945388 [GRCh37]
Chr20:20q13.2
likely pathogenic
GRCh37/hg19 20q13.2-13.33(chr20:54143747-62194881) copy number gain not provided [RCV000767669] Chr20:54143747..62194881 [GRCh37]
Chr20:20q13.2-13.33
pathogenic
NM_198437.3(AURKA):c.21C>T (p.Asn7=) single nucleotide variant not provided [RCV000907876] Chr20:56388177 [GRCh38]
Chr20:54963233 [GRCh37]
Chr20:20q13.2
benign

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:11393 AgrOrtholog
COSMIC AURKA COSMIC
Ensembl Genes ENSG00000087586 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000216911 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000321591 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000360407 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000379243 UniProtKB/TrEMBL
  ENSP00000379247 UniProtKB/Swiss-Prot
  ENSP00000379249 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000379250 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000379251 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000388073 UniProtKB/TrEMBL
  ENSP00000393452 UniProtKB/TrEMBL
  ENSP00000401358 UniProtKB/TrEMBL
  ENSP00000405042 UniProtKB/TrEMBL
  ENSP00000405170 UniProtKB/TrEMBL
Ensembl Transcript ENST00000312783 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000347343 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000371356 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000395907 UniProtKB/TrEMBL
  ENST00000395911 UniProtKB/Swiss-Prot
  ENST00000395913 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000395914 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000395915 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000420474 UniProtKB/TrEMBL
  ENST00000422322 UniProtKB/TrEMBL
  ENST00000441357 UniProtKB/TrEMBL
  ENST00000451915 UniProtKB/TrEMBL
  ENST00000456249 UniProtKB/TrEMBL
GTEx ENSG00000087586 GTEx
HGNC ID HGNC:11393 ENTREZGENE
Human Proteome Map AURKA Human Proteome Map
InterPro Aur UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AURKA UniProtKB/Swiss-Prot
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:6790 UniProtKB/Swiss-Prot
NCBI Gene 6790 ENTREZGENE
OMIM 114500 OMIM
  603072 OMIM
PANTHER PTHR24350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA36201 PharmGKB
PROSITE PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A3KFJ0_HUMAN UniProtKB/TrEMBL
  A3KFJ1_HUMAN UniProtKB/TrEMBL
  A3KFJ2_HUMAN UniProtKB/TrEMBL
  AURKA_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q5QPD1_HUMAN UniProtKB/TrEMBL
  Q5QPD2_HUMAN UniProtKB/TrEMBL
  Q5QPD4_HUMAN UniProtKB/TrEMBL
UniProt Secondary E1P5F9 UniProtKB/Swiss-Prot
  O60445 UniProtKB/Swiss-Prot
  O75873 UniProtKB/Swiss-Prot
  Q9BQD6 UniProtKB/Swiss-Prot
  Q9UPG5 UniProtKB/Swiss-Prot