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ONTOLOGY REPORT - ANNOTATIONS


Term:liver regeneration
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Accession:GO:0097421 term browser browse the term
Definition:The regrowth of lost or destroyed liver.


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liver regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 IEP RGD PMID:8855951 RGD:8548508 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Afp alpha-fetoprotein IEP RGD PMID:2460696 RGD:126848734 NCBI chr14:17,573,412...17,591,476
Ensembl chr14:17,573,412...17,591,480
JBrowse link
G Alas2 5'-aminolevulinate synthase 2 IEP RGD PMID:6895999 RGD:11035238 NCBI chr  X:19,463,146...19,486,526
Ensembl chr  X:19,463,171...19,486,519
JBrowse link
G Angpt1 angiopoietin 1 IEP RGD PMID:11549276 RGD:704403 NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067
JBrowse link
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 IEP RGD PMID:11032760 RGD:13782137 NCBI chr10:57,581,742...57,612,758
Ensembl chr10:57,582,128...57,612,748
JBrowse link
G Aurka aurora kinase A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19435814)
GO_REF:0000107
RGD
Ensembl
PMID:19435814 GO_REF:0000107 NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEP RGD PMID:21503946 RGD:11531107 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Ccnd1 cyclin D1 acts_upstream_of_or_within ISO (MGI:5515698|PMID:23740243) RGD PMID:23740243 MGI:5515698 NCBI chr 1:200,089,002...200,098,524
Ensembl chr 1:200,089,002...200,098,602
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta involved_in ISS
ISO
GO_REF:0000024
(MGI:1277818|PMID:9727068)
UniProt
RGD
PMID:9727068 GO_REF:0000024 MGI:1277818 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Cftr CF transmembrane conductance regulator IEP RGD PMID:1378998 RGD:11567227 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:15826721 RGD:11344894 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Cpb2 carboxypeptidase B2 IEP RGD PMID:19386599 RGD:7243112 NCBI chr15:50,557,722...50,606,569
Ensembl chr15:50,557,717...50,606,556
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IEP RGD PMID:31953200 RGD:25823179 NCBI chr 1:200,564,634...200,627,059
Ensembl chr 1:200,565,613...200,627,055
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 IEP RGD PMID:8573159 RGD:11565141 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 IEP RGD PMID:8573159 RGD:11565141 NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080
JBrowse link
G Csnk2b casein kinase 2 beta IEP RGD PMID:8573159 RGD:11565141 NCBI chr20:3,700,363...3,705,331
Ensembl chr20:3,698,733...3,707,133
JBrowse link
G Egfr epidermal growth factor receptor IEP
IMP
RGD PMID:2401457 PMID:20395437 RGD:10395295, RGD:38599218 NCBI chr14:91,176,931...91,349,722
Ensembl chr14:91,177,067...91,344,382
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:107940 (MGI:5637451|PMID:25477280) RGD PMID:25477280 MGI:5637451 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:1097695 (MGI:5637451|PMID:25477280) RGD PMID:25477280 MGI:5637451 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:10632538 RGD:8662889 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Fga fibrinogen alpha chain IEP RGD PMID:3817019 RGD:728788 NCBI chr 2:168,365,364...168,381,533
Ensembl chr 2:168,374,120...168,381,528
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 IEP RGD PMID:16162160 RGD:10402121 NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
JBrowse link
G Gfer growth factor, augmenter of liver regeneration IMP RGD PMID:24880092 RGD:9685725 NCBI chr10:13,718,489...13,721,782
Ensembl chr10:13,718,489...13,720,869
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEP RGD PMID:10934156 RGD:14701049 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442
JBrowse link
G Gli1 GLI family zinc finger 1 acts_upstream_of_or_within IEP
ISO
MGI:1857797 (MGI:5515698|PMID:23740243) RGD PMID:23740243 PMID:22790641 PMID:22024090 MGI:5515698, RGD:12832760, RGD:12911223 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
JBrowse link
G Gli3 GLI family zinc finger 3 IEP RGD PMID:22024090 RGD:12911223 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:22364558 RGD:8694419 NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
JBrowse link
G Hfe homeostatic iron regulator IEP RGD PMID:22364558 RGD:8694419 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link
G Hmox1 heme oxygenase 1 IMP RGD PMID:24815159 RGD:10755743 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 IEP RGD PMID:16081591 RGD:1599972 NCBI chr 1:182,411,836...182,415,447
Ensembl chr 1:182,412,151...182,415,442
JBrowse link
G Ihh Indian hedgehog signaling molecule IEP RGD PMID:22024090 RGD:12911223 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
JBrowse link
G Il10 interleukin 10 IEP RGD PMID:11813605 RGD:11049526 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:24412291 RGD:14696652 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Il6 interleukin 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:84432|PMID:8910279)
UniProt
RGD
PMID:8910279 GO_REF:0000024 MGI:84432 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Insr insulin receptor IEP RGD PMID:23633480 RGD:9685423 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 IMP RGD PMID:24814243 RGD:13793384 NCBI chr 4:141,187,377...141,554,240
Ensembl chr 4:141,187,418...141,510,491
JBrowse link
G Klkb1 kallikrein B1 IEP RGD PMID:9869390 RGD:7297052 NCBI chr16:46,958,634...46,982,054
Ensembl chr16:46,958,707...46,982,053
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:3335218 RGD:10059623 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Ncl nucleolin IEP RGD PMID:7490256 RGD:9686389 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Nfkbia NFKB inhibitor alpha IEP RGD PMID:24512945 RGD:10413865 NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941
JBrowse link
G Npm1 nucleophosmin 1 IEP RGD PMID:14635188 RGD:11534994 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 IEP RGD PMID:29138817 RGD:15042871 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Pcna proliferating cell nuclear antigen IEP RGD PMID:7906221 RGD:10448980 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 IEP RGD PMID:191106 RGD:11554175 NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
JBrowse link
G Pou2f1 POU class 2 homeobox 1 IEP RGD PMID:1841628 RGD:9743904 NCBI chr13:78,120,617...78,263,306
Ensembl chr13:78,130,685...78,263,363
JBrowse link
G Prmt1 protein arginine methyltransferase 1 IEP RGD PMID:15837430 RGD:2299961 NCBI chr 1:95,458,853...95,468,176
Ensembl chr 1:95,458,850...95,468,345
JBrowse link
G Prmt5 protein arginine methyltransferase 5 IEP RGD PMID:15837430 RGD:2299961 NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296
JBrowse link
G Ptch1 patched 1 IEP RGD PMID:22024090 RGD:12911223 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
JBrowse link
G Ptpn3 protein tyrosine phosphatase, non-receptor type 3 IEP RGD PMID:7591957 RGD:1599982 NCBI chr 5:71,908,520...72,027,323
Ensembl chr 5:71,911,135...72,065,443
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family IEP RGD PMID:9015365 RGD:10003155 NCBI chr 2:193,208,631...193,286,513
Ensembl chr 2:193,208,635...193,286,501
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IEP RGD PMID:22227930 RGD:9850085 NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521
JBrowse link
G Reg1a regenerating family member 1 alpha IEP RGD PMID:19284990 RGD:10044030 NCBI chr 4:110,892,451...110,895,115
Ensembl chr 4:110,892,453...110,895,570
JBrowse link
G Rgn regucalcin IEP RGD PMID:7759556 RGD:9590197 NCBI chr  X:1,619,030...1,634,456
Ensembl chr  X:1,619,032...1,634,450
JBrowse link
G Rpl10 ribosomal protein L10 IEP RGD PMID:6121318 RGD:11038709 NCBI chr  X:152,054,547...152,056,757
Ensembl chr  X:152,054,452...152,056,761
JBrowse link
G Rpl13 ribosomal protein L13 IEP RGD PMID:6121318 RGD:11038709 NCBI chr19:51,153,990...51,156,541
Ensembl chr19:51,153,924...51,163,014
JBrowse link
G Rpl18 ribosomal protein L18 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 1:96,188,811...96,191,452
Ensembl chr 1:96,188,112...96,191,452
JBrowse link
G Rpl19 ribosomal protein L19 IEP RGD PMID:6121318 RGD:11038709 NCBI chr10:83,022,503...83,026,030
Ensembl chr10:83,019,257...83,052,112
JBrowse link
G Rpl30 ribosomal protein L30 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 7:65,648,470...65,651,363
Ensembl chr 7:65,645,991...65,651,363
JBrowse link
G Rpl32 ribosomal protein L32 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 4:148,864,048...148,867,612
Ensembl chr 4:148,864,044...148,867,612
JBrowse link
G Rpl7 ribosomal protein L7 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 5:3,217,184...3,220,192 JBrowse link
G Rps15 ribosomal protein S15 IEP RGD PMID:2829897 RGD:11040696 NCBI chr 7:9,416,003...9,417,442
Ensembl chr 7:9,416,004...9,417,450
JBrowse link
G Rps16 ribosomal protein S16 IEP RGD PMID:6121318 RGD:11038709 NCBI chr 1:83,643,066...83,646,056
Ensembl chr 1:83,643,130...83,646,206
JBrowse link
G Rps24 ribosomal protein S24 IEP RGD PMID:7612009 RGD:11041663 NCBI chr16:89,538...94,267
Ensembl chr16:89,604...94,279
JBrowse link
G Serpina10 serpin family A member 10 IEP RGD PMID:8670294 RGD:729731 NCBI chr 6:122,756,106...122,764,544
Ensembl chr 6:122,756,108...122,764,544
JBrowse link
G Shh sonic hedgehog signaling molecule IEP RGD PMID:22790641 RGD:12832760 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 IEP RGD PMID:23633480 RGD:9685423 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IEP RGD PMID:7686911 RGD:729792 NCBI chr 6:100,605,165...100,610,192
Ensembl chr 6:100,605,456...100,610,177
JBrowse link
G Sulf2 sulfatase 2 acts_upstream_of_or_within ISO MGI:3587954 (MGI:5515698|PMID:23740243) RGD PMID:23740243 MGI:5515698 NCBI chr 3:154,822,079...154,904,566
Ensembl chr 3:154,822,085...154,904,415
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:25862490 RGD:11073669 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:9178702 RGD:14995465 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tyms thymidylate synthetase IEP RGD PMID:2707640 RGD:2317422 NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536
JBrowse link
G Ucp2 uncoupling protein 2 IEP RGD PMID:19104935 RGD:7204431 NCBI chr 1:154,839,242...154,845,612
Ensembl chr 1:154,839,209...154,845,611
JBrowse link
G Vtn vitronectin IDA RGD PMID:10988248 RGD:10003090 NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810
JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:12217600 RGD:727737 NCBI chr 4:158,360,152...158,491,539
Ensembl chr 4:158,360,152...158,491,539
JBrowse link
G Wdr35 WD repeat domain 35 IEP RGD PMID:18472094 RGD:11553927 NCBI chr 6:31,771,315...31,831,450
Ensembl chr 6:31,771,360...31,831,029
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    developmental process 6770
      anatomical structure development 6196
        regeneration 325
          animal organ regeneration 161
            liver regeneration 75
Path 2
Term Annotations click to browse term
  biological_process 19492
    developmental process 6770
      anatomical structure development 6196
        multicellular organism development 5633
          system development 5301
            animal organ development 4061
              gland development 665
                liver development 263
                  liver regeneration 75
paths to the root