RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term: Barrett's esophagus
Accession: DOID:9206
browse the term
Definition: An esophageal disease characterized by a change of normal esophageal squamous epithelium to a columnar and intestinal-type epithelium. (DO)
Synonyms: exact_synonym: Barrett epithelium; Barrett esophagus; Barrett metaplasia; Barrett syndrome; Barrett's Syndrome; Barrett's esophagus with esophagitis; Barrett's oesophagus; Barrett's ulcer of esophagus; Barretts Esophagus; Barretts syndrome; MSR1-RELATED CONDITION; ulcerative esophagitis
narrow_synonym: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA; BARRETT METAPLASIA ADENOCARCINOMA OF ESOPHAGUS
broad_synonym: ASCC1-RELATED CONDITION
primary_id: MESH:D001471
alt_id: MIM:614266
xref: EFO:0000280 ; GARD:20 ; ICD10CM:K22.7 ; ICD9CM:530.85 ; NCI:C2891
Please select species to view GViewer data.
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
N
Ascc1
activating signal cointegrator 1 complex subunit 1
ISO
ClinVar Annotator: match by term: ASCC1-related condition | ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus
OMIM ClinVar
PMID:21791690 PMID:25741868 PMID:26924529 PMID:28218388 PMID:28492532 PMID:30327447 PMID:33931933 More...
NCBI chrNW_004624754:5,902,696...6,009,564
Ensembl chrNW_004624754:5,902,557...6,009,560
G
G
ASCC1
activating signal cointegrator 1 complex subunit 1
ISO
ClinVar Annotator: match by term: ASCC1-related condition | ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus
OMIM ClinVar
PMID:21791690 PMID:25741868 PMID:26924529 PMID:28218388 PMID:28492532 PMID:30327447 PMID:33931933 More...
NCBI chr 9:59,095,335...59,205,646
Ensembl chr 9:59,097,501...59,204,874
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P
ASCC1
activating signal cointegrator 1 complex subunit 1
ISO
ClinVar Annotator: match by term: ASCC1-related condition | ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus
OMIM ClinVar
PMID:21791690 PMID:25741868 PMID:26924529 PMID:28218388 PMID:28492532 PMID:30327447 PMID:33931933 More...
NCBI chr14:74,975,163...75,109,283
Ensembl chr14:74,975,165...75,083,634
G
S
Ascc1
activating signal cointegrator 1 complex subunit 1
ISO
ClinVar Annotator: match by term: ASCC1-related condition | ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus
OMIM ClinVar
PMID:21791690 PMID:25741868 PMID:26924529 PMID:28218388 PMID:28492532 PMID:30327447 PMID:33931933 More...
NCBI chrNW_004936521:6,695,366...6,791,480
Ensembl chrNW_004936521:6,696,120...6,791,873
G
D
ASCC1
activating signal cointegrator 1 complex subunit 1
ISO
ClinVar Annotator: match by term: ASCC1-related condition | ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus
OMIM ClinVar
PMID:21791690 PMID:25741868 PMID:26924529 PMID:28218388 PMID:28492532 PMID:30327447 PMID:33931933 More...
NCBI chr 4:22,779,644...22,876,434
Ensembl chr 4:22,779,781...22,874,215
G
B
ASCC1
activating signal cointegrator 1 complex subunit 1
ISO
ClinVar Annotator: match by term: ASCC1-related condition | ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus
OMIM ClinVar
PMID:21791690 PMID:25741868 PMID:26924529 PMID:28218388 PMID:28492532 PMID:30327447 PMID:33931933 More...
NCBI chr10:68,646,113...68,740,097
Ensembl chr10:71,082,355...71,207,096
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C
Ascc1
activating signal cointegrator 1 complex subunit 1
ISO
ClinVar Annotator: match by term: ASCC1-related condition | ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus
OMIM ClinVar
PMID:21791690 PMID:25741868 PMID:26924529 PMID:28218388 PMID:28492532 PMID:30327447 PMID:33931933 More...
NCBI chrNW_004955437:19,381,279...19,487,057
Ensembl chrNW_004955437:19,381,279...19,490,822
G
R
Ascc1
activating signal cointegrator 1 complex subunit 1
ISO
ClinVar Annotator: match by term: ASCC1-related condition | ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus CTD Direct Evidence: marker/mechanism
OMIM ClinVar CTD
PMID:21791690 PMID:25741868 PMID:26924529 PMID:28218388 PMID:28492532 PMID:30327447 PMID:33931933 More...
NCBI chr20:28,484,044...28,574,195
Ensembl chr20:27,941,283...28,031,272
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M
Ascc1
activating signal cointegrator 1 complex subunit 1
ISO
ClinVar Annotator: match by term: ASCC1-related condition | ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus CTD Direct Evidence: marker/mechanism
OMIM ClinVar CTD
PMID:21791690 PMID:25741868 PMID:26924529 PMID:28218388 PMID:28492532 PMID:30327447 PMID:33931933 More...
NCBI chr10:59,838,414...59,935,812
Ensembl chr10:59,838,627...59,935,810
G
H
ASCC1
activating signal cointegrator 1 complex subunit 1
IAGP EXP
ClinVar Annotator: match by term: ASCC1-related condition ClinVar Annotator: match by term: Barrett esophagus CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA
OMIM ClinVar CTD
PMID:21791690 PMID:25741868 PMID:26924529 PMID:28218388 PMID:28492532 PMID:30327447 PMID:33931933 More...
NCBI chr10:72,096,032...72,217,134
Ensembl chr10:72,096,032...72,217,134
G
N
B3gat2
beta-1,3-glucuronyltransferase 2
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chrNW_004624819:9,018,689...9,099,645
Ensembl chrNW_004624819:9,018,682...9,098,927
G
G
B3GAT2
beta-1,3-glucuronyltransferase 2
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chr17:4,080,648...4,150,371
Ensembl chr17:4,081,403...4,149,335
G
P
B3GAT2
beta-1,3-glucuronyltransferase 2
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chr 1:50,941,967...51,041,586
Ensembl chr 1:50,938,251...51,041,583
G
S
B3gat2
beta-1,3-glucuronyltransferase 2
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chrNW_004936618:2,703,445...2,773,598
Ensembl chrNW_004936618:2,703,463...2,773,607
G
D
B3GAT2
beta-1,3-glucuronyltransferase 2
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chr12:33,321,691...33,400,516
Ensembl chr12:33,321,208...33,401,171
G
B
B3GAT2
beta-1,3-glucuronyltransferase 2
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chr 6:68,691,690...68,790,992
G
C
B3gat2
beta-1,3-glucuronyltransferase 2
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chrNW_004955488:5,866,148...5,926,567
G
R
B3gat2
beta-1,3-glucuronyltransferase 2
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chr 9:26,167,174...26,250,153
Ensembl chr 9:26,167,174...26,250,153
G
M
B3gat2
beta-1,3-glucuronyltransferase 2
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chr 1:23,801,007...23,886,946
Ensembl chr 1:23,800,834...23,888,239
G
H
B3GAT2
beta-1,3-glucuronyltransferase 2
IDA
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chr 6:70,856,679...70,957,060
Ensembl chr 6:70,856,679...70,957,060
G
N
Becn1
beclin 1
disease_progression
ISO
RGD
PMID:22301112
RGD:11561943
NCBI chrNW_004624795:1,386,154...1,406,314
Ensembl chrNW_004624795:1,385,756...1,405,714
G
G
BECN1
beclin 1
disease_progression
ISO
RGD
PMID:22301112
RGD:11561943
NCBI chr16:63,469,187...63,482,627
Ensembl chr16:63,469,192...63,485,322
G
P
BECN1
beclin 1
disease_progression
ISO
RGD
PMID:22301112
RGD:11561943
NCBI chr12:20,041,914...20,054,249
Ensembl chr12:20,041,956...20,054,373
G
S
Becn1
beclin 1
disease_progression
ISO
RGD
PMID:22301112
RGD:11561943
NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151
G
D
BECN1
beclin 1
disease_progression
ISO
RGD
PMID:22301112
RGD:11561943
NCBI chr 9:20,204,203...20,215,081
Ensembl chr 9:20,204,220...20,214,236
G
B
BECN1
beclin 1
disease_progression
ISO
RGD
PMID:22301112
RGD:11561943
NCBI chr17:14,493,619...14,507,809
Ensembl chr17:14,719,781...14,733,286
G
C
Becn1
beclin 1
disease_progression
ISO
RGD
PMID:22301112
RGD:11561943
NCBI chrNW_004955451:16,616,595...16,625,731
Ensembl chrNW_004955451:16,616,595...16,625,730
G
R
Becn1
beclin 1
disease_progression
IEP ISO
RGD
PMID:22301112 PMID:22301112
RGD:11561943 , RGD:11561943
NCBI chr10:86,731,649...86,747,002
Ensembl chr10:86,231,388...86,246,742
G
M
Becn1
beclin 1, autophagy related
disease_progression
ISO
RGD
PMID:22301112 PMID:22301112
RGD:11561943 , RGD:11561943
NCBI chr11:101,179,084...101,193,112
Ensembl chr11:101,176,778...101,193,112
G
H
BECN1
beclin 1
disease_progression
ISO IEP
RGD
PMID:22301112 PMID:22301112
RGD:11561943 , RGD:11561943
NCBI chr17:42,810,132...42,824,282
Ensembl chr17:42,810,134...42,833,350
G
N
Bmp4
bone morphogenetic protein 4
ISO
protein:increased expression:esophagus:
RGD
PMID:17570215
RGD:8699511
NCBI chrNW_004624731:15,262,480...15,269,196
Ensembl chrNW_004624731:15,263,274...15,269,743
G
G
BMP4
bone morphogenetic protein 4
ISO
protein:increased expression:esophagus:
RGD
PMID:17570215
RGD:8699511
NCBI chr24:31,097,673...31,104,774
Ensembl chr24:31,097,538...31,101,225
G
P
BMP4
bone morphogenetic protein 4
ISO
protein:increased expression:esophagus:
RGD
PMID:17570215
RGD:8699511
NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,146...183,422,637
G
S
Bmp4
bone morphogenetic protein 4
ISO
protein:increased expression:esophagus:
RGD
PMID:17570215
RGD:8699511
NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
G
D
BMP4
bone morphogenetic protein 4
ISO
protein:increased expression:esophagus:
RGD
PMID:17570215
RGD:8699511
NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
G
B
BMP4
bone morphogenetic protein 4
ISO
protein:increased expression:esophagus:
RGD
PMID:17570215
RGD:8699511
NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
G
C
Bmp4
bone morphogenetic protein 4
ISO
protein:increased expression:esophagus:
RGD
PMID:17570215
RGD:8699511
NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
G
R
Bmp4
bone morphogenetic protein 4
ISO IEP
protein:increased expression:esophagus:
RGD
PMID:17570215 PMID:17570215
RGD:8699511 , RGD:8699511
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
M
Bmp4
bone morphogenetic protein 4
ISO
protein:increased expression:esophagus:
RGD
PMID:17570215 PMID:17570215
RGD:8699511 , RGD:8699511
NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126
G
H
BMP4
bone morphogenetic protein 4
IEP ISO
protein:increased expression:esophagus:
RGD
PMID:17570215 PMID:17570215
RGD:8699511 , RGD:8699511
NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
G
N
Cdh13
cadherin 13
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18729198
NCBI chrNW_004624746:3,696,608...4,759,693
Ensembl chrNW_004624746:3,698,196...4,759,442
G
G
CDH13
cadherin 13
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18729198
NCBI chr 5:68,048,655...69,213,102
Ensembl chr 5:68,451,894...69,211,534
G
P
CDH13
cadherin 13
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18729198
NCBI chr 6:4,809,752...5,832,188
Ensembl chr 6:4,808,255...5,832,415
G
S
Cdh13
cadherin 13
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18729198
NCBI chrNW_004936641:3,925,185...4,223,421
Ensembl chrNW_004936641:3,931,033...4,224,101
G
D
CDH13
cadherin 13
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18729198
NCBI chr 5:68,491,156...69,586,119
Ensembl chr 5:68,492,022...69,489,255
G
B
CDH13
cadherin 13
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18729198
NCBI chr16:63,255,482...64,418,053
Ensembl chr16:82,883,184...83,808,996
G
C
Cdh13
cadherin 13
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18729198
NCBI chrNW_004955564:407,120...1,549,880
Ensembl chrNW_004955564:408,730...1,426,841
G
R
Cdh13
cadherin 13
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18729198
NCBI chr19:63,258,251...64,296,122
Ensembl chr19:46,349,430...47,387,459
G
M
Cdh13
cadherin 13
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18729198
NCBI chr 8:119,010,150...120,051,668
Ensembl chr 8:119,010,472...120,051,660
G
H
CDH13
cadherin 13
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:18729198
NCBI chr16:82,626,969...83,800,640
Ensembl chr16:82,626,965...83,800,640
G
N
Cdkn1a
cyclin dependent kinase inhibitor 1A
ISO
protein:increased expression:nucleus of esophagus mucosa:
RGD
PMID:11753681
RGD:8662398
NCBI chrNW_004624754:21,109,074...21,115,869
Ensembl chrNW_004624754:21,108,874...21,115,885
G
G
CDKN1A
cyclin dependent kinase inhibitor 1A
ISO
protein:increased expression:nucleus of esophagus mucosa:
RGD
PMID:11753681
RGD:8662398
NCBI chr17:35,445,668...35,454,334
Ensembl chr17:35,445,223...35,454,342
G
P
CDKN1A
cyclin dependent kinase inhibitor 1A
ISO
protein:increased expression:nucleus of esophagus mucosa:
RGD
PMID:11753681
RGD:8662398
NCBI chr 7:32,354,776...32,363,771
Ensembl chr 7:32,354,672...32,363,761
G
S
Cdkn1a
cyclin dependent kinase inhibitor 1A
ISO
protein:increased expression:nucleus of esophagus mucosa:
RGD
PMID:11753681
RGD:8662398
NCBI chrNW_004936476:22,717,308...22,725,127
Ensembl chrNW_004936476:22,717,260...22,725,182
G
D
CDKN1A
cyclin dependent kinase inhibitor 1A
ISO
protein:increased expression:nucleus of esophagus mucosa:
RGD
PMID:11753681
RGD:8662398
NCBI chr12:5,746,898...5,755,103
Ensembl chr12:5,745,852...5,892,281
G
B
CDKN1A
cyclin dependent kinase inhibitor 1A
ISO
protein:increased expression:nucleus of esophagus mucosa:
RGD
PMID:11753681
RGD:8662398
NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599
G
C
Cdkn1a
cyclin dependent kinase inhibitor 1A
ISO
protein:increased expression:nucleus of esophagus mucosa:
RGD
PMID:11753681
RGD:8662398
NCBI chrNW_004955437:6,254,638...6,261,278
Ensembl chrNW_004955437:6,254,309...6,261,479
G
R
Cdkn1a
cyclin-dependent kinase inhibitor 1A
ISO
protein:increased expression:nucleus of esophagus mucosa:
RGD
PMID:11753681
RGD:8662398
NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,149,217...7,159,585
G
M
Cdkn1a
cyclin dependent kinase inhibitor 1A
ISO
protein:increased expression:nucleus of esophagus mucosa:
RGD
PMID:11753681
RGD:8662398
NCBI chr17:29,309,953...29,319,696
Ensembl chr17:29,309,950...29,319,701
G
H
CDKN1A
cyclin dependent kinase inhibitor 1A
IEP
protein:increased expression:nucleus of esophagus mucosa:
RGD
PMID:11753681
RGD:8662398
NCBI chr 6:36,676,463...36,687,332
Ensembl chr 6:36,676,460...36,687,397
G
N
Cdx2
caudal type homeobox 2
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chrNW_004624776:10,551,503...10,556,987
Ensembl chrNW_004624776:10,551,503...10,556,845
G
G
CDX2
caudal type homeobox 2
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chr 3:7,080,142...7,088,010
Ensembl chr 3:7,078,503...7,087,285
G
P
CDX2
caudal type homeobox 2
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chr11:5,339,727...5,346,081
Ensembl chr11:5,339,716...5,346,057
G
S
Cdx2
caudal type homeobox 2
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chrNW_004936472:23,137,936...23,141,205
G
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CDX2
caudal type homeobox 2
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chr25:11,701,134...11,707,883
Ensembl chr25:11,700,779...11,707,127
G
B
CDX2
caudal type homeobox 2
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chr13:9,241,856...9,250,297
Ensembl chr13:27,586,340...27,593,632
G
C
Cdx2
caudal type homeobox 2
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chrNW_004955497:7,316,372...7,321,627
G
R
Cdx2
caudal type homeo box 2
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chr12:12,762,769...12,769,246
Ensembl chr12:7,726,798...7,733,142
G
M
Cdx2
caudal type homeobox 2
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chr 5:147,237,710...147,244,059
Ensembl chr 5:147,237,615...147,244,080
G
H
CDX2
caudal type homeobox 2
disease_progression
IEP
RGD
PMID:23011828
RGD:7349348
NCBI chr13:27,960,918...27,969,315
Ensembl chr13:27,960,918...27,969,315
G
N
Cthrc1
collagen triple helix repeat containing 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA
OMIM ClinVar
PMID:21791690
NCBI chrNW_004624763:19,917,199...19,925,824
Ensembl chrNW_004624763:19,917,169...19,925,896
G
G
CTHRC1
collagen triple helix repeat containing 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA
OMIM ClinVar
PMID:21791690
NCBI chr 8:98,227,661...98,239,984
Ensembl chr 8:98,227,705...98,240,753
G
P
CTHRC1
collagen triple helix repeat containing 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA
OMIM ClinVar
PMID:21791690
NCBI chr 4:33,759,541...33,771,625
Ensembl chr 4:33,759,542...33,771,582
G
S
Cthrc1
collagen triple helix repeat containing 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA
OMIM ClinVar
PMID:21791690
NCBI chrNW_004936470:40,381,215...40,392,105
Ensembl chrNW_004936470:40,377,835...40,392,225
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CTHRC1
collagen triple helix repeat containing 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA
OMIM ClinVar
PMID:21791690
NCBI chr13:4,801,049...4,811,565
Ensembl chr13:4,805,577...4,811,282
G
B
CTHRC1
collagen triple helix repeat containing 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA
OMIM ClinVar
PMID:21791690
NCBI chr 8:100,027,417...100,038,945
Ensembl chr 8:102,182,944...102,194,445
G
C
Cthrc1
collagen triple helix repeat containing 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA
OMIM ClinVar
PMID:21791690
NCBI chrNW_004955417:27,520,420...27,525,907
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Cthrc1
collagen triple helix repeat containing 1
ISO
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA
OMIM CTD ClinVar
PMID:21791690
NCBI chr 7:72,007,372...72,017,654
Ensembl chr 7:70,122,474...70,132,756
G
M
Cthrc1
collagen triple helix repeat containing 1
ISO
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA
OMIM CTD ClinVar
PMID:21791690
NCBI chr15:38,940,327...38,950,516
Ensembl chr15:38,940,327...38,950,516
G
H
CTHRC1
collagen triple helix repeat containing 1
IAGP EXP
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA
OMIM CTD ClinVar
PMID:21791690
NCBI chr 8:103,371,538...103,382,989
Ensembl chr 8:103,371,538...103,382,989
G
M
Cxcl15
C-X-C motif chemokine ligand 15
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 5:90,942,393...90,950,926
Ensembl chr 5:90,942,393...90,950,926
G
N
Cxcl8
C-X-C motif chemokine ligand 8
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004624730:1,744,097...1,747,206
Ensembl chrNW_004624730:1,743,916...1,747,293
G
G
CXCL8
C-X-C motif chemokine ligand 8
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 7:22,202,497...22,205,730
Ensembl chr 7:22,202,527...22,204,068
G
P
CXCL8
C-X-C motif chemokine ligand 8
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 8:69,932,646...69,935,861
Ensembl chr 8:69,932,643...69,935,861
G
D
CXCL8
C-X-C motif chemokine ligand 8
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr13:62,435,035...62,438,354
Ensembl chr13:62,434,422...62,438,354
G
B
CXCL8
C-X-C motif chemokine ligand 8
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 4:50,452,857...50,456,015
Ensembl chr 4:56,286,708...56,288,083
G
C
Cxcl8
C-X-C motif chemokine ligand 8
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004955474:247,326...250,355
Ensembl chrNW_004955474:241,501...250,643
G
H
CXCL8
C-X-C motif chemokine ligand 8
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 4:73,740,569...73,743,716
Ensembl chr 4:73,740,519...73,743,716
G
P
CYP26A1
cytochrome P450 family 26 subfamily A member 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18059332
NCBI chr14:104,561,394...104,567,099
Ensembl chr14:104,563,195...104,567,095
G
D
CYP26A1
cytochrome P450 family 26 subfamily A member 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18059332
NCBI chr28:7,423,955...7,432,359
Ensembl chr28:7,428,772...7,432,370
G
B
CYP26A1
cytochrome P450 family 26 subfamily A member 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18059332
NCBI chr10:89,817,623...89,822,024
Ensembl chr10:93,330,460...93,334,105
G
R
Cyp26a1
cytochrome P450, family 26, subfamily a, polypeptide 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18059332
NCBI chr 1:244,883,822...244,887,657
Ensembl chr 1:235,471,298...235,475,204
G
M
Cyp26a1
cytochrome P450, family 26, subfamily a, polypeptide 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18059332
NCBI chr19:37,686,186...37,689,984
Ensembl chr19:37,686,246...37,689,984
G
H
CYP26A1
cytochrome P450 family 26 subfamily A member 1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:18059332
NCBI chr10:93,073,475...93,077,885
Ensembl chr10:93,073,475...93,077,885
G
N
Fas
Fas cell surface death receptor
severity
ISO
RGD
PMID:10821489
RGD:12903968
NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848
G
P
FAS
Fas cell surface death receptor
severity
ISO
RGD
PMID:10821489
RGD:12903968
NCBI chr14:100,927,305...100,954,781
Ensembl chr14:100,927,089...100,956,716
G
S
Fas
Fas cell surface death receptor
severity
ISO
RGD
PMID:10821489
RGD:12903968
NCBI chrNW_004936735:209,369...234,582
G
D
FAS
Fas cell surface death receptor
severity
ISO
RGD
PMID:10821489
RGD:12903968
NCBI chr26:38,738,811...38,763,298
Ensembl chr26:38,737,611...38,763,321
G
B
FAS
Fas cell surface death receptor
severity
ISO
RGD
PMID:10821489
RGD:12903968
NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612
G
C
Fas
Fas cell surface death receptor
severity
ISO
RGD
PMID:10821489
RGD:12903968
NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
G
R
Fas
Fas cell surface death receptor
severity
ISO
RGD
PMID:10821489
RGD:12903968
NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591
G
M
Fas
Fas cell surface death receptor
severity
ISO
RGD
PMID:10821489
RGD:12903968
NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
G
H
FAS
Fas cell surface death receptor
severity
IEP
RGD
PMID:10821489
RGD:12903968
NCBI chr10:88,964,050...89,017,059
Ensembl chr10:88,953,813...89,029,605
G
N
Foxp1
forkhead box P1
ISO
DNA:snp:enhancer:g.70879779A>C (rs2687201) (human)
RGD
PMID:25447851
RGD:11560527
NCBI chrNW_004624773:5,543,529...6,076,522
Ensembl chrNW_004624773:5,543,536...5,883,131
G
G
FOXP1
forkhead box P1
ISO
DNA:snp:enhancer:g.70879779A>C (rs2687201) (human)
RGD
PMID:25447851
RGD:11560527
NCBI chr22:31,907,941...32,538,294
Ensembl chr22:31,912,460...32,154,502
G
P
FOXP1
forkhead box P1
ISO
DNA:snp:enhancer:g.70879779A>C (rs2687201) (human)
RGD
PMID:25447851
RGD:11560527
NCBI chr13:52,346,844...52,974,358
Ensembl chr13:52,348,234...52,876,892
G
S
Foxp1
forkhead box P1
ISO
DNA:snp:enhancer:g.70879779A>C (rs2687201) (human)
RGD
PMID:25447851
RGD:11560527
NCBI chrNW_004936603:2,631,781...3,146,104
Ensembl chrNW_004936603:2,632,274...2,830,324
G
D
FOXP1
forkhead box P1
ISO
DNA:snp:enhancer:g.70879779A>C (rs2687201) (human)
RGD
PMID:25447851
RGD:11560527
NCBI chr20:20,438,631...21,020,516
Ensembl chr20:20,788,433...21,016,397
G
B
FOXP1
forkhead box P1
ISO
DNA:snp:enhancer:g.70879779A>C (rs2687201) (human)
RGD
PMID:25447851
RGD:11560527
NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173
G
C
Foxp1
forkhead box P1
ISO
DNA:snp:enhancer:g.70879779A>C (rs2687201) (human)
RGD
PMID:25447851
RGD:11560527
NCBI chrNW_004955421:16,595,445...17,075,923
Ensembl chrNW_004955421:16,595,471...17,075,923
G
R
Foxp1
forkhead box P1
ISO
DNA:snp:enhancer:g.70879779A>C (rs2687201) (human)
RGD
PMID:25447851
RGD:11560527
NCBI chr 4:133,117,346...133,808,647
Ensembl chr 4:131,564,756...132,112,258
G
M
Foxp1
forkhead box P1
ISO
DNA:snp:enhancer:g.70879779A>C (rs2687201) (human)
RGD
PMID:25447851
RGD:11560527
NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682
G
H
FOXP1
forkhead box P1
IAGP
DNA:snp:enhancer:g.70879779A>C (rs2687201) (human)
RGD
PMID:25447851
RGD:11560527
NCBI chr 3:70,954,708...71,583,978
Ensembl chr 3:70,954,693...71,583,978
G
N
Gast
gastrin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004624795:1,976,170...1,976,819
Ensembl chrNW_004624795:1,976,380...1,976,819
G
G
GAST
gastrin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr16:64,526,548...64,532,145
Ensembl chr16:64,526,636...64,527,080
G
P
GAST
gastrin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr12:20,953,202...20,955,434
Ensembl chr12:20,953,202...20,955,434
G
S
Gast
gastrin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004936490:16,636,146...16,636,548
Ensembl chrNW_004936490:16,636,146...16,636,548
G
D
GAST
gastrin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 9:21,081,638...21,084,122
Ensembl chr 9:21,081,639...21,083,932
G
B
GAST
gastrin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr17:15,597,741...15,602,724
Ensembl chr17:15,816,656...15,820,296
G
C
Gast
gastrin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004955451:15,987,160...15,988,067
Ensembl chrNW_004955451:15,987,597...15,988,131
G
R
Gast
gastrin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr10:85,765,216...85,767,881
Ensembl chr10:85,264,832...85,267,496
G
M
Gast
gastrin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr11:100,225,233...100,227,823
Ensembl chr11:100,225,233...100,227,822
G
H
GAST
gastrin
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr17:41,712,331...41,715,969
Ensembl chr17:41,712,331...41,715,969
G
N
Gata6
GATA binding protein 6
disease_progression
ISO
protein:increased expression: esophagus squamous epithelium (human)
RGD
PMID:25445407
RGD:13208870
NCBI chrNW_004624770:9,772,818...9,799,837
Ensembl chrNW_004624770:9,772,818...9,798,259
G
G
GATA6
GATA binding protein 6
disease_progression
ISO
protein:increased expression: esophagus squamous epithelium (human)
RGD
PMID:25445407
RGD:13208870
NCBI chr18:58,312,328...58,345,472
Ensembl chr18:58,311,482...58,343,746
G
P
GATA6
GATA binding protein 6
disease_progression
ISO
protein:increased expression: esophagus squamous epithelium (human)
RGD
PMID:25445407
RGD:13208870
NCBI chr 6:107,282,709...107,314,725
Ensembl chr 6:107,282,849...107,314,626
G
S
Gata6
GATA binding protein 6
disease_progression
ISO
protein:increased expression: esophagus squamous epithelium (human)
RGD
PMID:25445407
RGD:13208870
NCBI chrNW_004936550:1,814,336...1,844,399
Ensembl chrNW_004936550:1,814,336...1,844,399
G
D
GATA6
GATA binding protein 6
disease_progression
ISO
protein:increased expression: esophagus squamous epithelium (human)
RGD
PMID:25445407
RGD:13208870
NCBI chr 7:65,932,114...65,962,574
G
B
GATA6
GATA binding protein 6
disease_progression
ISO
protein:increased expression: esophagus squamous epithelium (human)
RGD
PMID:25445407
RGD:13208870
NCBI chr18:15,411,764...15,444,402
G
R
Gata6
GATA binding protein 6
disease_progression
ISO
protein:increased expression: esophagus squamous epithelium (human)
RGD
PMID:25445407
RGD:13208870
NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532
G
M
Gata6
GATA binding protein 6
disease_progression
ISO
protein:increased expression: esophagus squamous epithelium (human)
RGD
PMID:25445407
RGD:13208870
NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635
G
H
GATA6
GATA binding protein 6
disease_progression
IEP
protein:increased expression: esophagus squamous epithelium (human)
RGD
PMID:25445407
RGD:13208870
NCBI chr18:22,169,589...22,202,528
Ensembl chr18:22,169,589...22,202,528
G
N
Gpx3
glutathione peroxidase 3
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chrNW_004624733:40,957,895...40,963,469
Ensembl chrNW_004624733:40,957,999...40,962,993
G
G
GPX3
glutathione peroxidase 3
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr23:53,576,950...53,585,321
G
P
GPX3
glutathione peroxidase 3
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr16:71,980,467...71,989,011
Ensembl chr16:71,980,475...71,989,026
G
S
Gpx3
glutathione peroxidase 3
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chrNW_004936647:3,904,787...3,914,223
Ensembl chrNW_004936647:3,906,113...3,913,498
G
D
GPX3
glutathione peroxidase 3
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr 4:58,200,671...58,209,010
Ensembl chr 4:58,200,672...58,209,010
G
B
GPX3
glutathione peroxidase 3
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr 5:146,447,939...146,456,476
G
C
Gpx3
glutathione peroxidase 3
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chrNW_004955408:2,622,162...2,629,088
Ensembl chrNW_004955408:2,622,741...2,629,032
G
R
Gpx3
glutathione peroxidase 3
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr10:39,529,335...39,537,406
Ensembl chr10:39,028,570...39,037,035
G
M
Gpx3
glutathione peroxidase 3
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr11:54,793,680...54,801,213
Ensembl chr11:54,793,279...54,801,203
G
H
GPX3
glutathione peroxidase 3
IDA
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr 5:151,020,591...151,028,988
Ensembl chr 5:151,020,591...151,028,988
G
N
Gpx7
glutathione peroxidase 7
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chrNW_004624859:618,517...624,635
Ensembl chrNW_004624859:618,517...624,610
G
G
GPX7
glutathione peroxidase 7
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr20:80,335,248...80,342,687
Ensembl chr20:80,335,033...80,342,124
G
P
GPX7
glutathione peroxidase 7
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr 6:159,590,479...159,598,768
Ensembl chr 6:159,590,482...159,599,293
G
S
Gpx7
glutathione peroxidase 7
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chrNW_004936522:8,381,678...8,388,800
Ensembl chrNW_004936522:8,381,377...8,389,357
G
D
GPX7
glutathione peroxidase 7
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr15:8,777,626...8,784,409
G
B
GPX7
glutathione peroxidase 7
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr 1:51,827,000...51,870,924
Ensembl chr 1:53,471,624...53,477,448
G
C
Gpx7
glutathione peroxidase 7
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chrNW_004955464:6,560,198...6,566,763
Ensembl chrNW_004955464:6,558,336...6,566,763
G
R
Gpx7
glutathione peroxidase 7
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr 5:128,373,881...128,381,866
Ensembl chr 5:123,144,331...123,153,004
G
M
Gpx7
glutathione peroxidase 7
ISO
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr 4:108,257,414...108,263,910
Ensembl chr 4:108,257,587...108,264,158
G
H
GPX7
glutathione peroxidase 7
IDA
DNA:hypermethylation:promoter
RGD
PMID:18664505
RGD:151665749
NCBI chr 1:52,602,371...52,609,051
Ensembl chr 1:52,602,371...52,609,051
G
N
Hgf
hepatocyte growth factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004624739:30,233,589...30,307,508
Ensembl chrNW_004624739:30,236,146...30,307,356
G
G
HGF
hepatocyte growth factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr21:67,118,785...67,193,506
Ensembl chr21:67,120,722...67,193,504
G
P
HGF
hepatocyte growth factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 9:98,437,771...98,513,573
Ensembl chr 9:98,438,143...98,513,564
G
S
Hgf
hepatocyte growth factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004936734:354,798...428,356
Ensembl chrNW_004936734:356,115...428,779
G
D
HGF
hepatocyte growth factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr18:21,329,688...21,410,257
Ensembl chr18:21,332,817...21,410,263
G
B
HGF
hepatocyte growth factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 7:73,667,618...73,738,960
Ensembl chr 7:87,327,798...87,397,811
G
C
Hgf
hepatocyte growth factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004955410:4,114,280...4,181,953
Ensembl chrNW_004955410:4,114,778...4,182,058
G
R
Hgf
hepatocyte growth factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 4:19,628,902...19,700,467
Ensembl chr 4:18,677,101...18,745,409
G
M
Hgf
hepatocyte growth factor
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 5:16,758,493...16,827,448
Ensembl chr 5:16,758,493...16,825,150
G
H
HGF
hepatocyte growth factor
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 7:81,699,010...81,770,047
Ensembl chr 7:81,699,010...81,770,438
G
N
Igfbp3
insulin like growth factor binding protein 3
ISO
associated with Aneuploidy; protein:increased expression:serum:
RGD
PMID:18006928
RGD:12743582
NCBI chrNW_004624740:6,878,818...6,886,512
Ensembl chrNW_004624740:6,877,348...6,886,512
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G
IGFBP3
insulin like growth factor binding protein 3
ISO
associated with Aneuploidy; protein:increased expression:serum:
RGD
PMID:18006928
RGD:12743582
NCBI chr21:12,905,309...12,914,199
Ensembl chr21:12,905,280...12,914,205
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P
IGFBP3
insulin like growth factor binding protein 3
ISO
associated with Aneuploidy; protein:increased expression:serum:
RGD
PMID:18006928
RGD:12743582
NCBI chr18:50,002,921...50,009,425
Ensembl chr18:50,003,022...50,010,690
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S
Igfbp3
insulin like growth factor binding protein 3
ISO
associated with Aneuploidy; protein:increased expression:serum:
RGD
PMID:18006928
RGD:12743582
NCBI chrNW_004936478:20,511,490...20,518,251
Ensembl chrNW_004936478:20,510,137...20,518,306
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IGFBP3
insulin like growth factor binding protein 3
ISO
associated with Aneuploidy; protein:increased expression:serum:
RGD
PMID:18006928
RGD:12743582
NCBI chr16:1,021,855...1,027,604
Ensembl chr16:1,021,972...1,026,392
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B
IGFBP3
insulin like growth factor binding protein 3
ISO
associated with Aneuploidy; protein:increased expression:serum:
RGD
PMID:18006928
RGD:12743582
NCBI chr 7:46,564,234...46,573,145
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C
Igfbp3
insulin like growth factor binding protein 3
ISO
associated with Aneuploidy; protein:increased expression:serum:
RGD
PMID:18006928
RGD:12743582
NCBI chrNW_004955456:6,795,560...6,802,147
Ensembl chrNW_004955456:6,795,604...6,800,845
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Igfbp3
insulin-like growth factor binding protein 3
ISO
associated with Aneuploidy; protein:increased expression:serum:
RGD
PMID:18006928
RGD:12743582
NCBI chr14:86,270,208...86,277,944
Ensembl chr14:82,056,347...82,064,083
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M
Igfbp3
insulin-like growth factor binding protein 3
ISO
associated with Aneuploidy; protein:increased expression:serum:
RGD
PMID:18006928
RGD:12743582
NCBI chr11:7,156,086...7,165,498
Ensembl chr11:7,156,086...7,163,923
G
H
IGFBP3
insulin like growth factor binding protein 3
IEP
associated with Aneuploidy; protein:increased expression:serum:
RGD
PMID:18006928
RGD:12743582
NCBI chr 7:45,912,245...45,921,272
Ensembl chr 7:45,912,245...45,921,874
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N
LOC101699044
cytochrome P450 26A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18059332
NCBI chrNW_004624737:4,324,964...4,329,488
Ensembl chrNW_004624737:4,325,755...4,329,758
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S
LOC101964975
interleukin-8
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004936598:1,779,471...1,781,353
Ensembl chrNW_004936598:1,779,471...1,781,353
G
S
LOC101977861
cytochrome P450 26A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18059332
NCBI chrNW_004936601:1,810,572...1,815,927
Ensembl chrNW_004936601:1,809,992...1,814,074
G
G
LOC103216270
cytochrome P450 26A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:18059332
NCBI chr 9:86,310,142...86,328,622
Ensembl chr 9:86,325,401...86,328,775
G
N
Mcl1
MCL1 apoptosis regulator, BCL2 family member
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chrNW_004624772:18,287,587...18,292,384
Ensembl chrNW_004624772:18,289,509...18,319,033
G
G
MCL1
MCL1 apoptosis regulator, BCL2 family member
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
G
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MCL1
MCL1 apoptosis regulator, BCL2 family member
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr 4:98,562,092...98,567,014
Ensembl chr 4:98,534,812...98,567,006
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S
Mcl1
MCL1 apoptosis regulator, BCL2 family member
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chrNW_004936580:803,452...806,966
Ensembl chrNW_004936580:804,903...806,796
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D
MCL1
MCL1 apoptosis regulator, BCL2 family member
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr17:59,759,605...59,763,111
Ensembl chr17:59,759,605...59,763,111
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B
MCL1
MCL1 apoptosis regulator, BCL2 family member
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr 1:125,918,760...125,923,952
Ensembl chr 1:129,566,827...129,572,086
G
C
Mcl1
MCL1 apoptosis regulator, BCL2 family member
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chrNW_004955413:238,043...243,317
G
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Mcl1
MCL1 apoptosis regulator, BCL2 family member
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr 2:185,884,840...185,912,532
Ensembl chr 2:183,219,220...183,222,303
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Mcl1
myeloid cell leukemia sequence 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr 3:95,564,017...95,583,553
Ensembl chr 3:95,566,099...95,570,487
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H
MCL1
MCL1 apoptosis regulator, BCL2 family member
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr 1:150,574,558...150,579,610
Ensembl chr 1:150,560,895...150,579,738
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P
MIR145
microRNA mir-145
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 2:150,580,126...150,580,211
Ensembl chr 2:150,580,126...150,580,211
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D
MIR145
microRNA mir-145
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 4:59,533,128...59,533,210
Ensembl chr 4:59,533,128...59,533,210
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Mir145
microRNA 145
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr18:57,369,983...57,370,070
Ensembl chr18:55,099,640...55,099,727
G
H
MIR145
microRNA 145
HEP
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 5:149,430,646...149,430,733
Ensembl chr 5:149,430,646...149,430,733
G
M
Mir145a
microRNA 145a
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr18:61,780,896...61,780,965
Ensembl chr18:61,780,896...61,780,965
G
P
MIR181A-1
microRNA mir-181a-1
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr10:21,696,653...21,696,756
Ensembl chr10:21,696,653...21,696,756
G
D
MIR181A-1
microRNA mir-181a-1
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 7:4,055,465...4,055,526
Ensembl chr 7:4,055,465...4,055,526
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M
Mir181a-1
microRNA 181a-1
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 1:137,894,193...137,894,279
Ensembl chr 1:137,894,193...137,894,279
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H
MIR181A1
microRNA 181a-1
HEP
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 1:198,859,044...198,859,153
Ensembl chr 1:198,859,044...198,859,153
G
H
MIR192
microRNA 192
HDA
DNA:hypomethylation
RGD
PMID:29906417
RGD:153344526
NCBI chr11:64,891,137...64,891,246
Ensembl chr11:64,891,137...64,891,246
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H
MIR194-2
microRNA 194-2
HDA
DNA:hypomethylation
RGD
PMID:29906417
RGD:153344526
NCBI chr11:64,891,355...64,891,439
Ensembl chr11:64,891,355...64,891,439
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P
MIR196A-2
microRNA mir-196a-2
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 5:19,204,442...19,204,548
Ensembl chr 5:19,204,442...19,204,548
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D
MIR196A-2
microRNA mir-196a-2
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr27:1,270,718...1,270,776
Ensembl chr27:1,270,691...1,270,800
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Mir196a-2
microRNA 196a-2
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr15:102,881,785...102,881,869
Ensembl chr15:102,881,785...102,881,869
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Mir196a2
microRNA 196a-2
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 7:135,988,876...135,988,985
Ensembl chr 7:134,110,400...134,110,509
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H
MIR196A2
microRNA 196a-2
HEP
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr12:53,991,738...53,991,847
Ensembl chr12:53,991,738...53,991,847
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MIR199-1
microRNA mir-199-1
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr20:50,410,924...50,410,984
Ensembl chr20:50,410,913...50,410,994
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D
MIR199-3
microRNA mir-199-3
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 9:55,262,354...55,262,412
Ensembl chr 9:55,262,328...55,262,437
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Mir199a-1
microRNA 199a-1
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 9:21,407,791...21,407,860
Ensembl chr 9:21,407,791...21,407,860
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P
MIR199A-2
microRNA mir-199a-2
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 2:69,558,051...69,558,130
Ensembl chr 2:69,558,050...69,558,131
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H
MIR199A1
microRNA 199a-1
HEP
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr19:10,817,426...10,817,496
Ensembl chr19:10,817,426...10,817,496
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P
MIR199B
microRNA mir-199b
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 1:268,691,520...268,691,593
Ensembl chr 1:268,691,502...268,691,610
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Mir199b
microRNA 199b
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 2:32,208,472...32,208,581
Ensembl chr 2:32,208,472...32,208,581
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H
MIR199B
microRNA 199b
HEP
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 9:128,244,721...128,244,830
Ensembl chr 9:128,244,721...128,244,830
G
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Mir215
microRNA 215
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 1:185,045,778...185,045,889
Ensembl chr 1:185,045,778...185,045,889
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H
MIR215
microRNA 215
HEP
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 1:220,117,853...220,117,962
Ensembl chr 1:220,117,853...220,117,962
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D
MIR223
microRNA mir-223
disease_progression
ISO
RGD
PMID:23757351
RGD:21408587
NCBI chr X:50,838,131...50,838,233
Ensembl chr X:50,838,131...50,838,233
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Mir223
microRNA 223
disease_progression
ISO
RGD
PMID:23757351
RGD:21408587
NCBI chr X:65,151,383...65,151,492
Ensembl chr X:61,141,887...61,141,996
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M
Mir223
microRNA 223
disease_progression
ISO
RGD
PMID:23757351
RGD:21408587
NCBI chr X:95,286,423...95,286,532
Ensembl chr X:95,286,423...95,286,532
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H
MIR223
microRNA 223
disease_progression
IEP
RGD
PMID:23757351
RGD:21408587
NCBI chr X:66,018,870...66,018,979
Ensembl chr X:66,018,870...66,018,979
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MIR30A
microRNA mir-30a
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 1:51,412,827...51,412,933
Ensembl chr 1:51,412,827...51,412,933
G
D
MIR30A
microRNA mir-30a
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr12:33,783,894...33,783,956
Ensembl chr12:33,783,891...33,783,961
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Mir30a
microRNA 30a
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 9:33,233,941...33,234,011
Ensembl chr 9:25,737,600...25,737,670
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M
Mir30a
microRNA 30a
ISO
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 1:23,311,350...23,311,420
Ensembl chr 1:23,311,350...23,311,420
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H
MIR30A
microRNA 30a
HEP
miRNA:increased expression:esophagus (human)
RGD
PMID:29906417
RGD:153344526
NCBI chr 6:71,403,551...71,403,621
Ensembl chr 6:71,403,551...71,403,621
G
N
Mki67
marker of proliferation Ki-67
severity
ISO
RGD
PMID:22147251
RGD:6483521
NCBI chrNW_004624737:18,935,686...18,963,907
G
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MKI67
marker of proliferation Ki-67
severity
ISO
RGD
PMID:22147251
RGD:6483521
NCBI chr 9:120,697,183...120,727,039
Ensembl chr 9:120,698,834...120,726,866
G
P
MKI67
marker of proliferation Ki-67
severity
ISO
RGD
PMID:22147251
RGD:6483521
NCBI chr14:137,266,622...137,296,312
G
S
Mki67
marker of proliferation Ki-67
severity
ISO
RGD
PMID:22147251
RGD:6483521
NCBI chrNW_004936486:15,561,327...15,587,109
G
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MKI67
marker of proliferation Ki-67
severity
ISO
RGD
PMID:22147251
RGD:6483521
NCBI chr28:36,920,679...36,939,336
Ensembl chr28:36,913,023...36,939,486
G
B
MKI67
marker of proliferation Ki-67
severity
ISO
RGD
PMID:22147251
RGD:6483521
NCBI chr10:124,684,336...124,714,143
Ensembl chr10:128,936,037...128,962,555
G
C
Mki67
marker of proliferation Ki-67
severity
ISO
RGD
PMID:22147251
RGD:6483521
NCBI chrNW_004955477:5,847,288...5,875,970
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Mki67
marker of proliferation Ki-67
severity
ISO
RGD
PMID:22147251
RGD:6483521
NCBI chr 1:199,926,150...199,952,847
Ensembl chr 1:190,496,319...190,522,762
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Mki67
antigen identified by monoclonal antibody Ki 67
severity
ISO
RGD
PMID:22147251
RGD:6483521
NCBI chr 7:135,291,513...135,318,286
Ensembl chr 7:135,291,513...135,318,090
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H
MKI67
marker of proliferation Ki-67
severity
IEP
RGD
PMID:22147251
RGD:6483521
NCBI chr10:128,096,659...128,126,423
Ensembl chr10:128,096,659...128,126,423
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N
Mmp1
matrix metallopeptidase 1
ISO
DNA:insertion:promoter:g.-1607insG (rs1799750) (human)
RGD
PMID:19321798
RGD:7207058
NCBI chrNW_004624878:71,642...79,660
Ensembl chrNW_004624878:71,642...79,602
G
G
MMP1
matrix metallopeptidase 1
ISO
DNA:insertion:promoter:g.-1607insG (rs1799750) (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr 1:94,167,507...94,177,357
Ensembl chr 1:94,167,219...94,176,767
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P
MMP1
matrix metallopeptidase 1
ISO
DNA:insertion:promoter:g.-1607insG (rs1799750) (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr 9:33,411,738...33,420,205
Ensembl chr 9:33,411,065...33,420,076
G
S
Mmp1
matrix metallopeptidase 1
ISO
DNA:insertion:promoter:g.-1607insG (rs1799750) (human)
RGD
PMID:19321798
RGD:7207058
NCBI chrNW_004936551:5,167,909...5,175,149
Ensembl chrNW_004936551:5,168,044...5,174,857
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MMP1
matrix metallopeptidase 1
ISO
DNA:insertion:promoter:g.-1607insG (rs1799750) (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr 5:28,978,385...28,986,644
Ensembl chr 5:28,978,473...28,986,648
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B
MMP1
matrix metallopeptidase 1
ISO
DNA:insertion:promoter:g.-1607insG (rs1799750) (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr11:97,730,545...97,739,190
Ensembl chr11:101,221,393...101,230,104
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Mmp1
matrix metallopeptidase 1
ISO
DNA:insertion:promoter:g.-1607insG rs1799750 (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr 8:12,943,453...12,963,966
Ensembl chr 8:4,658,588...4,679,097
G
H
MMP1
matrix metallopeptidase 1
IAGP
DNA:insertion:promoter:g.-1607insG (rs1799750) (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr11:102,789,919...102,798,160
Ensembl chr11:102,789,401...102,798,160
G
N
Mmp12
matrix metallopeptidase 12
ISO
DNA:snp:promoter:g.-82A>G rs2276109 (human)
RGD
PMID:19321798
RGD:7207058
NCBI chrNW_004624878:6,017...17,368
Ensembl chrNW_004624878:6,035...17,445
G
G
MMP12
matrix metallopeptidase 12
ISO
DNA:snp:promoter:g.-82A>G rs2276109 (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr 1:94,243,061...94,261,035
Ensembl chr 1:94,243,875...94,259,591
G
P
MMP12
matrix metallopeptidase 12
ISO
DNA:snp:promoter:g.-82A>G rs2276109 (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr 9:33,473,625...33,483,630
Ensembl chr 9:33,473,093...33,483,679
G
S
Mmp12
matrix metallopeptidase 12
ISO
DNA:snp:promoter:g.-82A>G rs2276109 (human)
RGD
PMID:19321798
RGD:7207058
NCBI chrNW_004936551:5,107,567...5,117,843
Ensembl chrNW_004936551:5,106,285...5,117,843
G
D
MMP12
matrix metallopeptidase 12
ISO
DNA:snp:promoter:g.-82A>G rs2276109 (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr 5:28,918,626...28,933,404
Ensembl chr 5:28,918,594...28,933,309
G
B
MMP12
matrix metallopeptidase 12
ISO
DNA:snp:promoter:g.-82A>G rs2276109 (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr11:97,809,644...97,822,063
Ensembl chr11:101,294,475...101,306,762
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C
Mmp12
matrix metallopeptidase 12
ISO
DNA:snp:promoter:g.-82A>G rs2276109 (human)
RGD
PMID:19321798
RGD:7207058
NCBI chrNW_004955412:6,045,146...6,057,112
Ensembl chrNW_004955412:6,045,100...6,057,262
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Mmp12
matrix metallopeptidase 12
ISO
DNA:snp:promoter:g.-82A>G rs2276109 (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr 8:12,866,652...12,876,554
Ensembl chr 8:4,581,785...4,599,611
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Mmp12
matrix metallopeptidase 12
ISO
DNA:snp:promoter:g.-82A>G rs2276109 (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr 9:7,344,397...7,360,461
Ensembl chr 9:7,344,381...7,369,499
G
H
MMP12
matrix metallopeptidase 12
IAGP
DNA:snp:promoter:g.-82A>G rs2276109 (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr11:102,862,736...102,874,982
Ensembl chr11:102,862,736...102,874,982
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Mmp1a
matrix metallopeptidase 1a (interstitial collagenase)
ISO
DNA:insertion:promoter:g.-1607insG rs1799750 (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr 9:7,464,141...7,476,870
Ensembl chr 9:7,464,141...7,476,857
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Mmp1b
matrix metallopeptidase 1b (interstitial collagenase)
ISO
DNA:insertion:promoter:g.-1607insG (rs1799750) (human)
RGD
PMID:19321798
RGD:7207058
NCBI chr 9:7,367,670...7,388,026
Ensembl chr 9:7,368,239...7,388,047
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Msr1
macrophage scavenger receptor 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus | ClinVar Annotator: match by term: MSR1-related condition
OMIM ClinVar
PMID:12244320 PMID:12958598 PMID:21791690 PMID:24082139 PMID:25333069 PMID:25741868 PMID:28492532 More...
NCBI chrNW_004624839:694,149...769,322
Ensembl chrNW_004624839:694,032...770,254
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MSR1
macrophage scavenger receptor 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus | ClinVar Annotator: match by term: MSR1-related condition
OMIM ClinVar
PMID:12244320 PMID:12958598 PMID:21791690 PMID:24082139 PMID:25333069 PMID:25741868 PMID:28492532 More...
NCBI chr 8:14,221,389...14,305,059
Ensembl chr 8:14,220,529...14,304,946
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MSR1
macrophage scavenger receptor 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus | ClinVar Annotator: match by term: MSR1-related condition
OMIM ClinVar
PMID:12244320 PMID:12958598 PMID:21791690 PMID:24082139 PMID:25333069 PMID:25741868 PMID:28492532 More...
NCBI chr17:3,859,903...3,939,612
Ensembl chr17:3,859,692...3,939,726
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Msr1
macrophage scavenger receptor 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus | ClinVar Annotator: match by term: MSR1-related condition
OMIM ClinVar
PMID:12244320 PMID:12958598 PMID:21791690 PMID:24082139 PMID:25333069 PMID:25741868 PMID:28492532 More...
NCBI chrNW_004936573:5,345,282...5,391,946
Ensembl chrNW_004936573:5,328,526...5,388,901
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MSR1
macrophage scavenger receptor 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus | ClinVar Annotator: match by term: MSR1-related condition
OMIM ClinVar
PMID:12244320 PMID:12958598 PMID:21791690 PMID:24082139 PMID:25333069 PMID:25741868 PMID:28492532 More...
NCBI chr16:39,434,948...39,513,727
Ensembl chr16:39,436,753...39,527,438
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MSR1
macrophage scavenger receptor 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus | ClinVar Annotator: match by term: MSR1-related condition
OMIM ClinVar
PMID:12244320 PMID:12958598 PMID:21791690 PMID:24082139 PMID:25333069 PMID:25741868 PMID:28492532 More...
NCBI chr 8:15,335,795...15,421,472
Ensembl chr 8:12,088,873...12,175,927
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Msr1
macrophage scavenger receptor 1
ISO
ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus | ClinVar Annotator: match by term: MSR1-related condition
OMIM ClinVar
PMID:12244320 PMID:12958598 PMID:21791690 PMID:24082139 PMID:25333069 PMID:25741868 PMID:28492532 More...
NCBI chrNW_004955463:1,197,086...1,263,943
Ensembl chrNW_004955463:1,197,022...1,264,765
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Msr1
macrophage scavenger receptor 1
ISO
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus | ClinVar Annotator: match by term: MSR1-related condition
OMIM CTD ClinVar
PMID:12244320 PMID:12958598 PMID:21791690 PMID:24082139 PMID:25333069 PMID:25741868 PMID:28492532 More...
NCBI chr16:59,421,250...59,507,070
Ensembl chr16:52,717,732...52,799,676
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Msr1
macrophage scavenger receptor 1
ISO
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA | ClinVar Annotator: match by term: Barrett esophagus | ClinVar Annotator: match by term: MSR1-related condition
OMIM CTD ClinVar
PMID:12244320 PMID:12958598 PMID:21791690 PMID:24082139 PMID:25333069 PMID:25741868 PMID:28492532 More...
NCBI chr 8:39,996,284...40,095,790
Ensembl chr 8:40,034,726...40,095,714
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MSR1
macrophage scavenger receptor 1
IAGP EXP
ClinVar Annotator: match by term: MSR1-related condition ClinVar Annotator: match by term: Barrett esophagus | ClinVar Annotator: match by term: MSR1-related condition CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: BARRETT ESOPHAGUS/ESOPHAGEAL ADENOCARCINOMA
OMIM ClinVar CTD
PMID:12244320 PMID:12958598 PMID:21791690 PMID:24082139 PMID:25333069 PMID:25741868 PMID:28492532 More...
NCBI chr 8:16,107,881...16,192,651
Ensembl chr 8:16,107,878...16,567,490
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Muc2
mucin 2, oligomeric mucus/gel-forming
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chrNW_004624766:21,493,125...21,522,535
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MUC2
mucin 2, oligomeric mucus/gel-forming
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chr 1:893,554...926,854
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MUC2
mucin 2, oligomeric mucus/gel-forming
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chr 2:689,363...719,542
Ensembl chr 2:689,364...710,330
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Muc2
mucin 2, oligomeric mucus/gel-forming
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chrNW_004936816:60,499...91,628
Ensembl chrNW_004936816:60,499...91,628
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MUC2
mucin 2, oligomeric mucus/gel-forming
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chr18:45,416,347...45,438,226
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MUC2
mucin 2, oligomeric mucus/gel-forming
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chr11:1,106,716...1,144,489
Ensembl chr11:1,143,625...1,169,741
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Muc2
mucin 2, oligomeric mucus/gel-forming
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chrNW_004955476:11,108,826...11,135,697
Ensembl chrNW_004955476:11,108,826...11,135,697
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Muc2
mucin 2, oligomeric mucus/gel-forming
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chr 1:206,225,775...206,261,280
Ensembl chr 1:196,799,517...196,831,756
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Muc2
mucin 2
disease_progression
ISO
RGD
PMID:23011828
RGD:7349348
NCBI chr 7:141,276,583...141,308,428
Ensembl chr 7:141,276,583...141,308,430
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MUC2
mucin 2, oligomeric mucus/gel-forming
disease_progression
IEP
RGD
PMID:23011828
RGD:7349348
NCBI chr11:1,074,874...1,110,508
Ensembl chr11:1,074,875...1,110,511
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Nr1i2
nuclear receptor subfamily 1 group I member 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21977915
NCBI chrNW_004624731:28,371,707...28,405,327
Ensembl chrNW_004624731:28,371,707...28,381,357
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G
NR1I2
nuclear receptor subfamily 1 group I member 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21977915
NCBI chr22:61,005,404...61,043,016
Ensembl chr22:61,006,667...61,040,832
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NR1I2
nuclear receptor subfamily 1 group I member 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21977915
NCBI chr13:140,373,571...140,406,129
Ensembl chr13:140,364,075...140,406,112
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S
Nr1i2
nuclear receptor subfamily 1 group I member 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21977915
NCBI chrNW_004936536:6,691,590...6,726,421
Ensembl chrNW_004936536:6,691,590...6,726,704
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NR1I2
nuclear receptor subfamily 1 group I member 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21977915
NCBI chr33:23,444,367...23,456,405
Ensembl chr33:23,432,690...23,455,347
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NR1I2
nuclear receptor subfamily 1 group I member 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21977915
NCBI chr 3:116,901,579...116,940,366
Ensembl chr 3:123,815,135...123,853,129
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Nr1i2
nuclear receptor subfamily 1 group I member 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21977915
NCBI chrNW_004955427:19,459,936...19,487,276
Ensembl chrNW_004955427:19,459,936...19,487,276
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Nr1i2
nuclear receptor subfamily 1, group I, member 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21977915
NCBI chr11:75,965,717...76,006,733
Ensembl chr11:62,460,213...62,496,658
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M
Nr1i2
nuclear receptor subfamily 1, group I, member 2
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21977915
NCBI chr16:38,068,711...38,115,211
Ensembl chr16:38,068,685...38,115,186
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H
NR1I2
nuclear receptor subfamily 1 group I member 2
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:21977915
NCBI chr 3:119,782,101...119,818,487
Ensembl chr 3:119,780,484...119,818,487
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Pparg
peroxisome proliferator activated receptor gamma
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481
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PPARG
peroxisome proliferator activated receptor gamma
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr22:48,262,743...48,407,415
Ensembl chr22:48,275,600...48,407,418
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PPARG
peroxisome proliferator activated receptor gamma
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944
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S
Pparg
peroxisome proliferator activated receptor gamma
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
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PPARG
peroxisome proliferator activated receptor gamma
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981
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PPARG
peroxisome proliferator activated receptor gamma
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060
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C
Pparg
peroxisome proliferator activated receptor gamma
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387
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Pparg
peroxisome proliferator-activated receptor gamma
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:148,423,194...148,548,468
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M
Pparg
peroxisome proliferator activated receptor gamma
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
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H
PPARG
peroxisome proliferator activated receptor gamma
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
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Ptges
prostaglandin E synthase
ISO
mRNA:increased expression:esophagus
RGD
PMID:14684572
RGD:2300107
NCBI chrNW_004624760:5,643,549...5,653,747
Ensembl chrNW_004624760:5,643,501...5,654,475
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PTGES
prostaglandin E synthase
ISO
mRNA:increased expression:esophagus
RGD
PMID:14684572
RGD:2300107
NCBI chr12:8,393,462...8,408,441
Ensembl chr12:8,393,550...8,408,435
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PTGES
prostaglandin E synthase
ISO
mRNA:increased expression:esophagus
RGD
PMID:14684572
RGD:2300107
NCBI chr 1:269,911,785...269,924,481
Ensembl chr 1:269,911,789...269,924,462
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S
Ptges
prostaglandin E synthase
ISO
mRNA:increased expression:esophagus
RGD
PMID:14684572
RGD:2300107
NCBI chrNW_004936487:16,959,263...16,968,909
Ensembl chrNW_004936487:16,959,231...16,968,922
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PTGES
prostaglandin E synthase
ISO
mRNA:increased expression:esophagus
RGD
PMID:14684572
RGD:2300107
NCBI chr 9:54,071,472...54,082,232
Ensembl chr 9:54,071,472...54,082,232
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B
PTGES
prostaglandin E synthase
ISO
mRNA:increased expression:esophagus
RGD
PMID:14684572
RGD:2300107
NCBI chr 9:100,865,702...100,880,408
Ensembl chr 9:129,522,547...129,537,020
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C
Ptges
prostaglandin E synthase
ISO
mRNA:increased expression:esophagus
RGD
PMID:14684572
RGD:2300107
NCBI chrNW_004955445:10,053,745...10,056,981
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R
Ptges
prostaglandin E synthase
IEP
mRNA:increased expression:esophagus
RGD
PMID:14684572
RGD:2300107
NCBI chr 3:34,575,643...34,586,987
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M
Ptges
prostaglandin E synthase
ISO
mRNA:increased expression:esophagus
RGD
PMID:14684572
RGD:2300107
NCBI chr 2:30,779,483...30,793,309
Ensembl chr 2:30,779,483...30,819,875
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H
PTGES
prostaglandin E synthase
ISO
mRNA:increased expression:esophagus
RGD
PMID:14684572
RGD:2300107
NCBI chr 9:129,738,349...129,753,042
Ensembl chr 9:129,738,331...129,753,042
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Ptgs2
prostaglandin-endoperoxide synthase 2
disease_progression
ISO
mRNA: increased expression: Esophagus CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:11059772 PMID:12105834 PMID:15387324 PMID:17244951 PMID:17675820 PMID:23011828 More...
RGD:13207438 RGD:1642603 RGD:7349348
NCBI chrNW_004624814:6,897,818...6,904,890
Ensembl chrNW_004624814:6,897,857...6,903,728
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PTGS2
prostaglandin-endoperoxide synthase 2
disease_progression
ISO
mRNA: increased expression: Esophagus CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:11059772 PMID:12105834 PMID:15387324 PMID:17244951 PMID:17675820 PMID:23011828 More...
RGD:13207438 RGD:1642603 RGD:7349348
NCBI chr25:42,733,535...42,742,463
Ensembl chr25:42,734,771...42,742,429
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PTGS2
prostaglandin-endoperoxide synthase 2
disease_progression
ISO
mRNA: increased expression: Esophagus CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:11059772 PMID:12105834 PMID:15387324 PMID:17244951 PMID:17675820 PMID:23011828 More...
RGD:13207438 RGD:1642603 RGD:7349348
NCBI chr 9:127,850,164...127,858,866
Ensembl chr 9:127,850,015...127,858,884
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S
Ptgs2
prostaglandin-endoperoxide synthase 2
disease_progression
ISO
mRNA: increased expression: Esophagus CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:11059772 PMID:12105834 PMID:15387324 PMID:17244951 PMID:17675820 PMID:23011828 More...
RGD:13207438 RGD:1642603 RGD:7349348
NCBI chrNW_004936481:3,821,564...3,828,086
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D
PTGS2
prostaglandin-endoperoxide synthase 2
disease_progression
ISO
mRNA: increased expression: Esophagus CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:11059772 PMID:12105834 PMID:15387324 PMID:17244951 PMID:17675820 PMID:23011828 More...
RGD:13207438 RGD:1642603 RGD:7349348
NCBI chr 7:19,668,079...19,674,903
Ensembl chr 7:19,668,082...19,674,903
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B
PTGS2
prostaglandin-endoperoxide synthase 2
disease_progression
ISO
CTD Direct Evidence: marker/mechanism mRNA: increased expression: Esophagus
RGD CTD
PMID:11059772 PMID:12105834 PMID:15387324 PMID:17244951 PMID:17675820 PMID:23011828 More...
RGD:13207438 RGD:1642603 RGD:7349348
NCBI chr 1:162,205,534...162,214,130
Ensembl chr 1:166,355,845...166,364,519
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C
Ptgs2
prostaglandin-endoperoxide synthase 2
disease_progression
ISO
mRNA: increased expression: Esophagus CTD Direct Evidence: marker/mechanism
RGD CTD
PMID:11059772 PMID:12105834 PMID:15387324 PMID:17244951 PMID:17675820 PMID:23011828 More...
RGD:13207438 RGD:1642603 RGD:7349348
NCBI chrNW_004955406:25,077,988...25,086,259
Ensembl chrNW_004955406:25,079,945...25,086,171
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Ptgs2
prostaglandin-endoperoxide synthase 2
disease_progression
IMP ISO
mRNA: increased expression: Esophagus CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:11059772 PMID:15387324 PMID:17244951 PMID:17675820 PMID:12105834 PMID:23011828 More...
RGD:1642603 , RGD:13207438 , RGD:7349348
NCBI chr13:64,714,063...64,722,320
Ensembl chr13:62,163,932...62,172,188
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M
Ptgs2
prostaglandin-endoperoxide synthase 2
disease_progression
ISO
mRNA: increased expression: Esophagus CTD Direct Evidence: marker/mechanism
CTD RGD
PMID:11059772 PMID:15387324 PMID:17244951 PMID:17675820 PMID:12105834 PMID:23011828 More...
RGD:1642603 , RGD:13207438 , RGD:7349348
NCBI chr 1:149,975,851...149,983,978
Ensembl chr 1:149,975,782...149,983,978
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H
PTGS2
prostaglandin-endoperoxide synthase 2
disease_progression
ISO EXP IEP
CTD Direct Evidence: marker/mechanism mRNA: increased expression: Esophagus
CTD RGD
PMID:11059772 PMID:15387324 PMID:17244951 PMID:17675820 PMID:12105834 PMID:23011828 More...
RGD:1642603 , RGD:13207438 , RGD:7349348
NCBI chr 1:186,671,791...186,680,423
Ensembl chr 1:186,671,791...186,680,922
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Rela
RELA proto-oncogene, NF-kB subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004624767:20,732,813...20,742,016
Ensembl chrNW_004624767:20,732,938...20,741,272
G
G
RELA
RELA proto-oncogene, NF-kB subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 1:8,576,059...8,585,561
Ensembl chr 1:8,576,542...8,586,516
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P
RELA
RELA proto-oncogene, NF-kB subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 2:6,594,869...6,602,684
Ensembl chr 2:6,593,969...6,603,469
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S
Rela
RELA proto-oncogene, NF-kB subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813
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D
RELA
RELA proto-oncogene, NF-kB subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr18:51,550,003...51,558,861
Ensembl chr18:51,550,040...51,558,875
G
B
RELA
RELA proto-oncogene, NF-kB subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr11:61,012,839...61,022,225
Ensembl chr11:64,347,859...64,356,868
G
C
Rela
RELA proto-oncogene, NF-kB subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516
G
R
Rela
RELA proto-oncogene, NF-kB subunit
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:202,924,945...202,935,484
G
M
Rela
v-rel reticuloendotheliosis viral oncogene homolog A (avian)
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr19:5,686,993...5,698,162
Ensembl chr19:5,687,511...5,698,158
G
H
RELA
RELA proto-oncogene, NF-kB subunit
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:15387324
NCBI chr11:65,653,601...65,663,857
Ensembl chr11:65,653,599...65,663,090
G
N
Rprm
reprimo, TP53 dependent G2 arrest mediator homolog
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17121882
NCBI chrNW_004624732:12,540,265...12,541,118
Ensembl chrNW_004624732:12,540,610...12,540,939
G
G
RPRM
reprimo, TP53 dependent G2 arrest mediator homolog
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17121882
NCBI chr10:38,863,940...38,865,912
Ensembl chr10:38,864,844...38,865,170
G
P
RPRM
reprimo, TP53 dependent G2 arrest mediator homolog
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17121882
NCBI chr15:61,140,687...61,143,397
Ensembl chr15:61,140,688...61,142,607
G
S
Rprm
reprimo, TP53 dependent G2 arrest mediator homolog
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17121882
NCBI chrNW_004936469:24,313,850...24,315,318
Ensembl chrNW_004936469:24,314,105...24,314,434
G
D
RPRM
reprimo, TP53 dependent G2 arrest mediator homolog
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17121882
G
B
RPRM
reprimo, TP53 dependent G2 arrest mediator homolog
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17121882
NCBI chr2B:40,772,338...40,773,805
Ensembl chr2B:158,009,772...158,010,101
G
R
Rprm
reprimo, TP53 dependent G2 arrest mediator homolog
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17121882
NCBI chr 3:58,948,618...58,950,035
Ensembl chr 3:38,539,581...38,540,998
G
M
Rprm
reprimo, TP53 dependent G2 arrest mediator candidate
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17121882
NCBI chr 2:53,974,105...53,975,564
Ensembl chr 2:53,974,105...53,975,564
G
H
RPRM
reprimo, TP53 dependent G2 arrest mediator homolog
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:17121882
NCBI chr 2:153,477,338...153,478,762
Ensembl chr 2:153,477,338...153,478,762
G
N
Slc9a1
solute carrier family 9 member A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chrNW_004624764:11,041,118...11,095,892
Ensembl chrNW_004624764:11,039,051...11,095,885
G
G
SLC9A1
solute carrier family 9 member A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr20:105,613,289...105,670,868
Ensembl chr20:105,613,338...105,674,208
G
P
SLC9A1
solute carrier family 9 member A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr 6:84,373,921...84,426,447
Ensembl chr 6:84,372,649...84,426,997
G
S
Slc9a1
solute carrier family 9 member A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chrNW_004936474:11,460,266...11,517,420
Ensembl chrNW_004936474:11,459,929...11,517,478
G
D
SLC9A1
solute carrier family 9 member A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr 2:73,054,742...73,103,364
Ensembl chr 2:73,054,742...73,103,364
G
B
SLC9A1
solute carrier family 9 member A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr 1:26,359,818...26,418,910
Ensembl chr 1:27,414,937...27,475,089
G
C
Slc9a1
solute carrier family 9 member A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chrNW_004955452:6,409,833...6,467,841
Ensembl chrNW_004955452:6,409,833...6,467,841
G
R
Slc9a1
solute carrier family 9 member A1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr 5:150,859,412...150,913,525
Ensembl chr 5:145,576,334...145,629,624
G
M
Slc9a1
solute carrier family 9 (sodium/hydrogen exchanger), member 1
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr 4:133,097,022...133,151,013
Ensembl chr 4:133,097,017...133,151,013
G
H
SLC9A1
solute carrier family 9 member A1
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:21127259
NCBI chr 1:27,098,809...27,155,125
Ensembl chr 1:27,098,809...27,166,981
G
N
Smo
smoothened, frizzled class receptor
treatment
ISO
RGD
PMID:23108119
RGD:150340553
NCBI chrNW_004624783:7,012,385...7,039,302
Ensembl chrNW_004624783:7,011,899...7,039,921
G
G
SMO
smoothened, frizzled class receptor
treatment
ISO
RGD
PMID:23108119
RGD:150340553
NCBI chr21:97,788,955...97,814,549
Ensembl chr21:97,788,624...97,814,709
G
P
SMO
smoothened, frizzled class receptor
treatment
ISO
RGD
PMID:23108119
RGD:150340553
NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898
G
S
Smo
smoothened, frizzled class receptor
treatment
ISO
RGD
PMID:23108119
RGD:150340553
NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281
G
D
SMO
smoothened, frizzled class receptor
treatment
ISO
RGD
PMID:23108119
RGD:150340553
NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
G
B
SMO
smoothened, frizzled class receptor
treatment
ISO
RGD
PMID:23108119
RGD:150340553
NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048
G
C
Smo
smoothened, frizzled class receptor
treatment
ISO
RGD
PMID:23108119
RGD:150340553
NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
G
R
Smo
smoothened, frizzled class receptor
treatment
IMP
RGD
PMID:23108119
RGD:150340553
NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829
G
M
Smo
smoothened, frizzled class receptor
treatment
ISO
RGD
PMID:23108119
RGD:150340553
NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364
G
H
SMO
smoothened, frizzled class receptor
treatment
ISO
RGD
PMID:23108119
RGD:150340553
NCBI chr 7:129,188,633...129,213,545
Ensembl chr 7:129,188,633...129,213,545
G
N
Sst
somatostatin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17999418
NCBI chrNW_004624730:69,213,917...69,215,296
Ensembl chrNW_004624730:69,213,781...69,215,477
G
G
SST
somatostatin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17999418
NCBI chr15:81,946,287...81,947,775
Ensembl chr15:81,946,206...81,947,790
G
P
SST
somatostatin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17999418
NCBI chr13:125,337,560...125,338,742
Ensembl chr13:125,337,418...125,338,850
G
S
Sst
somatostatin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17999418
NCBI chrNW_004936578:2,464,310...2,465,673
Ensembl chrNW_004936578:2,464,212...2,465,701
G
D
SST
somatostatin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17999418
NCBI chr34:20,063,091...20,064,520
Ensembl chr34:20,063,090...20,064,557
G
B
SST
somatostatin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17999418
NCBI chr 3:184,695,561...184,697,091
Ensembl chr 3:193,155,363...193,158,337
G
R
Sst
somatostatin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17999418
NCBI chr11:90,461,546...90,462,823
Ensembl chr11:76,956,896...76,958,173
G
M
Sst
somatostatin
ISO
CTD Direct Evidence: marker/mechanism
CTD
PMID:17999418
NCBI chr16:23,708,327...23,710,041
Ensembl chr16:23,708,323...23,709,708
G
H
SST
somatostatin
EXP
CTD Direct Evidence: marker/mechanism
CTD
PMID:17999418
NCBI chr 3:187,668,912...187,670,394
Ensembl chr 3:187,668,912...187,670,394
G
N
Vdr
vitamin D receptor
susceptibility
ISO
DNA:SNPs,haplotype:exon:rs1989969,rs2238135 (human)
RGD
PMID:25910066
RGD:11055189
NCBI chrNW_004624816:4,314,146...4,423,946
Ensembl chrNW_004624816:4,365,961...4,424,514
G
G
VDR
vitamin D receptor
susceptibility
ISO
DNA:SNPs,haplotype:exon:rs1989969,rs2238135 (human)
RGD
PMID:25910066
RGD:11055189
NCBI chr11:44,062,198...44,126,295
Ensembl chr11:44,065,457...44,166,684
G
P
VDR
vitamin D receptor
susceptibility
ISO
DNA:SNPs,haplotype:exon:rs1989969,rs2238135 (human)
RGD
PMID:25910066
RGD:11055189
NCBI chr 5:78,205,807...78,266,505
Ensembl chr 5:78,205,810...78,266,475
G
S
Vdr
vitamin D receptor
susceptibility
ISO
DNA:SNPs,haplotype:exon:rs1989969,rs2238135 (human)
RGD
PMID:25910066
RGD:11055189
NCBI chrNW_004936512:5,741,836...5,800,999
Ensembl chrNW_004936512:5,740,748...5,801,109
G
D
VDR
vitamin D receptor
susceptibility
ISO
DNA:SNPs,haplotype:exon:rs1989969,rs2238135 (human)
RGD
PMID:25910066
RGD:11055189
NCBI chr27:6,852,915...6,909,466
Ensembl chr27:6,852,723...6,909,470
G
B
VDR
vitamin D receptor
susceptibility
ISO
DNA:SNPs,haplotype:exon:rs1989969,rs2238135 (human)
RGD
PMID:25910066
RGD:11055189
NCBI chr12:40,828,413...40,891,700
Ensembl chr12:41,702,742...41,766,192
G
C
Vdr
vitamin D receptor
susceptibility
ISO
DNA:SNPs,haplotype:exon:rs1989969,rs2238135 (human)
RGD
PMID:25910066
RGD:11055189
NCBI chrNW_004955500:6,745,725...6,798,052
Ensembl chrNW_004955500:6,745,678...6,798,048
G
R
Vdr
vitamin D receptor
susceptibility
ISO
DNA:SNPs,haplotype:exon:rs1989969,rs2238135 (human)
RGD
PMID:25910066
RGD:11055189
NCBI chr 7:130,864,764...130,916,757
Ensembl chr 7:128,987,981...129,037,677
G
M
Vdr
vitamin D (1,25-dihydroxyvitamin D3) receptor
susceptibility
ISO
DNA:SNPs,haplotype:exon:rs1989969,rs2238135 (human)
RGD
PMID:25910066
RGD:11055189
NCBI chr15:97,752,308...97,806,177
Ensembl chr15:97,752,306...97,808,511
G
H
VDR
vitamin D receptor
susceptibility
IAGP
DNA:SNPs,haplotype:exon:rs1989969,rs2238135 (human)
RGD
PMID:25910066
RGD:11055189
NCBI chr12:47,841,537...47,904,994
Ensembl chr12:47,841,537...47,943,048
G
R
Zfy1
zinc finger protein 1, Y-linked
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
G
M
Zfy1
zinc finger protein 1, Y-linked
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chr Y:725,207...797,409
Ensembl chr Y:725,128...797,409
G
N
Znf793
zinc finger protein 793
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chrNW_004624794:10,923,874...10,958,479
Ensembl chrNW_004624794:10,927,225...10,935,717
G
G
ZNF793
zinc finger protein 793
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chr 6:32,165,455...32,224,056
Ensembl chr 6:32,217,307...32,222,748
G
S
Znf793
zinc finger protein 793
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chrNW_004936801:36,647...93,158
Ensembl chrNW_004936801:70,390...86,130
G
D
ZNF793
zinc finger protein 793
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chr 1:115,830,999...115,866,294
Ensembl chr 1:115,844,904...115,854,520
G
B
ZNF793
zinc finger protein 793
ISO
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chr19:34,447,879...34,480,226
Ensembl chr19:42,282,849...42,325,557
G
H
ZNF793
zinc finger protein 793
IDA
DNA:hypermethylation:esophageal squamous epithelium
RGD
PMID:26545406
RGD:11552890
NCBI chr19:37,506,428...37,543,333
Ensembl chr19:37,506,939...37,548,762
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
N
Rad21
RAD21 cohesin complex component
ISO
ClinVar Annotator: match by term: Mungan syndrome
OMIM ClinVar
PMID:14638363 PMID:18414213 PMID:25575569 PMID:25741868 PMID:28492532
NCBI chrNW_004624763:15,131,106...15,157,512
Ensembl chrNW_004624763:15,131,005...15,158,155
G
G
RAD21
RAD21 cohesin complex component
ISO
ClinVar Annotator: match by term: Mungan syndrome
OMIM ClinVar
PMID:14638363 PMID:18414213 PMID:25575569 PMID:25741868 PMID:28492532
NCBI chr 8:111,486,356...111,515,641
Ensembl chr 8:111,486,048...111,507,729
G
P
RAD21
RAD21 cohesin complex component
ISO
ClinVar Annotator: match by term: Mungan syndrome
OMIM ClinVar
PMID:14638363 PMID:18414213 PMID:25575569 PMID:25741868 PMID:28492532
NCBI chr 4:21,772,821...21,802,453
Ensembl chr 4:21,772,855...21,802,715
G
S
Rad21
RAD21 cohesin complex component
ISO
ClinVar Annotator: match by term: Mungan syndrome
OMIM ClinVar
PMID:14638363 PMID:18414213 PMID:25575569 PMID:25741868 PMID:28492532
NCBI chrNW_004936470:29,377,793...29,403,422
Ensembl chrNW_004936470:29,377,734...29,407,312
G
D
RAD21
RAD21 cohesin complex component
ISO
ClinVar Annotator: match by term: Mungan syndrome
OMIM ClinVar
PMID:14638363 PMID:18414213 PMID:25575569 PMID:25741868 PMID:28492532
NCBI chr13:16,337,563...16,368,041
Ensembl chr13:16,338,972...16,368,035
G
B
RAD21
RAD21 cohesin complex component
ISO
ClinVar Annotator: match by term: Mungan syndrome
OMIM ClinVar
PMID:14638363 PMID:18414213 PMID:25575569 PMID:25741868 PMID:28492532
NCBI chr 8:113,520,456...113,549,339
Ensembl chr 8:116,063,503...116,092,421
G
C
Rad21
RAD21 cohesin complex component
ISO
ClinVar Annotator: match by term: Mungan syndrome
OMIM ClinVar
PMID:14638363 PMID:18414213 PMID:25575569 PMID:25741868 PMID:28492532
NCBI chrNW_004955417:22,941,549...22,966,395
Ensembl chrNW_004955417:22,941,479...22,966,837
G
R
Rad21
RAD21 cohesin complex component
ISO
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: Mungan syndrome
OMIM CTD ClinVar
PMID:14638363 PMID:18414213 PMID:25575569 PMID:25741868 PMID:28492532
NCBI chr 7:85,177,715...85,204,657
Ensembl chr 7:83,287,870...83,314,817
G
M
Rad21
RAD21 cohesin complex component
ISO
CTD Direct Evidence: marker/mechanism ClinVar Annotator: match by term: Mungan syndrome
OMIM CTD ClinVar
PMID:14638363 PMID:18414213 PMID:25575569 PMID:25741868 PMID:28492532
NCBI chr15:51,826,000...51,856,934
Ensembl chr15:51,825,636...51,855,143
G
H
RAD21
RAD21 cohesin complex component
IAGP EXP
ClinVar Annotator: match by term: Mungan syndrome CTD Direct Evidence: marker/mechanism
OMIM ClinVar CTD
PMID:14638363 PMID:18414213 PMID:25575569 PMID:25741868 PMID:28492532
NCBI chr 8:116,845,934...116,874,776
Ensembl chr 8:116,845,934...116,874,776
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all