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Gene: Cdh13 (cadherin 13) Ictidomys tridecemlineatus

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Symbol:

Cdh13

Name:

cadherin 13

RGD ID:

12592015

Description:

ENCODES a protein that exhibits adiponectin binding (inferred); beta-catenin binding (inferred); cadherin binding (inferred); INVOLVED IN cellular response to toxic substance (ortholog); cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); arteriosclerosis (ortholog); Barrett's esophagus (ortholog); FOUND IN GABA-ergic synapse (ortholog); perinuclear region of cytoplasm (ortholog); synapse (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

cadherin 13, H-cadherin (heart); cadherin-13

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CDH13 (cadherin 13)	NCBI	Ortholog
Mus musculus (house mouse):	Cdh13 (cadherin 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Cdh13 (cadherin 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Cdh13 (cadherin 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CDH13 (cadherin 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CDH13 (cadherin 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CDH13 (cadherin 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CDH13 (cadherin 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Cdh13 (cadherin 13)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	28,171,641 - 28,469,935 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936641	3,931,033 - 4,224,101 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936641	3,925,185 - 4,223,421 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amphetamine abuse (ISO)

arteriosclerosis (ISO)

Barrett's esophagus (ISO)

breast cancer (ISO)

breast carcinoma (ISO)

cervical cancer (ISO)

coronary restenosis (ISO)

endometrial carcinoma (ISO)

Esophageal Neoplasms (ISO)

Experimental Mammary Neoplasms (ISO)

Germ Cell and Embryonal Neoplasms (ISO)

hepatocellular carcinoma (ISO)

Lung Neoplasms (ISO)

lung non-small cell carcinoma (ISO)

ovarian cancer (ISO)

prostate cancer (ISO)

Prostatic Neoplasms (ISO)

substance-related disorder (ISO)

urinary bladder cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adherens junction organization (IEA)

calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (IEA)

cell adhesion (IEA)

cell migration (IEA)

cell morphogenesis (IEA)

cell-cell adhesion mediated by cadherin (IEA)

cell-cell junction assembly (IEA)

cellular response to toxic substance (ISO)

cellular response to xenobiotic stimulus (ISO)

endothelial cell migration (IEA)

homophilic cell adhesion via plasma membrane adhesion molecules (IEA)

keratinocyte proliferation (IEA)

lamellipodium assembly (IEA)

localization within membrane (IEA)

low-density lipoprotein particle mediated signaling (IEA)

negative regulation of cell adhesion (IEA)

negative regulation of cell population proliferation (IEA)

positive regulation of calcium-mediated signaling (IEA)

positive regulation of cell migration (IEA)

positive regulation of cell-matrix adhesion (IEA)

positive regulation of endothelial cell proliferation (IEA)

positive regulation of positive chemotaxis (IEA)

positive regulation of smooth muscle cell proliferation (IEA)

positive regulation of transcription by RNA polymerase II (IEA)

Rac protein signal transduction (IEA)

regulation of endocytosis (IEA)

regulation of epidermal growth factor receptor signaling pathway (IEA)

Rho protein signal transduction (IEA)

sprouting angiogenesis (IEA)

Cellular Component

adherens junction (IEA)

catenin complex (IEA)

caveola (IEA)

cytoplasm (IEA)

external side of plasma membrane (IEA)

extracellular space (IEA)

GABA-ergic synapse (ISO)

membrane (IEA)

neuron projection (IEA)

perinuclear region of cytoplasm (ISO)

plasma membrane (IEA)

synapse (ISO)

Molecular Function

adiponectin binding (IEA)

beta-catenin binding (IEA)

cadherin binding (IEA)

calcium ion binding (IEA)

identical protein binding (IEA)

lipoprotein particle binding (IEA)

low-density lipoprotein particle binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Cdh13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	28,171,641 - 28,469,935 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936641	3,931,033 - 4,224,101 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936641	3,925,185 - 4,223,421 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CDH13
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	82,626,969 - 83,800,640 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	82,626,965 - 83,800,640 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	82,660,574 - 83,834,245 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	81,218,079 - 82,387,702 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	81,218,078 - 82,387,698	NCBI
Celera	16	66,958,625 - 68,131,309 (+)	NCBI		Celera
Cytogenetic Map	16	q23.3	NCBI
HuRef	16	68,413,614 - 69,581,731 (+)	NCBI		HuRef
CHM1_1	16	84,071,783 - 85,241,595 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	88,691,276 - 89,866,370 (+)	NCBI		T2T-CHM13v2.0

Cdh13
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	119,010,150 - 120,051,668 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	119,010,472 - 120,051,660 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	118,140,017 - 119,324,929 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	118,283,733 - 119,324,921 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	120,807,655 - 121,847,348 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	121,169,722 - 122,209,431 (+)	NCBI		MGSCv36	mm8
Celera	8	122,501,087 - 123,539,200 (+)	NCBI		Celera
Cytogenetic Map	8	E1	NCBI
cM Map	8	65.97	NCBI

Cdh13
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	63,258,251 - 64,296,122 (+)	NCBI		GRCr8
mRatBN7.2	19	46,349,562 - 47,387,462 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	46,349,430 - 47,387,459 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	53,154,689 - 54,181,827 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	53,822,337 - 54,862,256 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	56,050,181 - 57,076,905 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	50,848,793 - 51,971,618 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	50,848,736 - 51,972,103 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	62,345,236 - 62,720,155 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	19	61,621,434 - 62,245,798 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	48,507,173 - 49,575,123 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	48,512,053 - 49,580,001 (+)	NCBI
Celera	19	45,613,369 - 46,646,704 (+)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI

Cdh13
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955564	408,730 - 1,426,841 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955564	407,120 - 1,549,880 (-)	NCBI	ChiLan1.0	ChiLan1.0

CDH13
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	92,377,952 - 93,541,587 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	98,297,600 - 99,460,039 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	63,255,482 - 64,418,053 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	82,651,203 - 83,810,566 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	82,883,184 - 83,808,996 (+)	Ensembl	panpan1.1		panPan2

CDH13
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	68,491,156 - 69,586,119 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	68,492,022 - 69,489,255 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	68,504,431 - 69,504,811 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	68,788,965 - 69,796,268 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	68,788,965 - 69,795,981 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	68,736,496 - 69,737,712 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	68,572,996 - 69,574,406 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	68,989,116 - 69,991,896 (-)	NCBI		UU_Cfam_GSD_1.0

CDH13
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	4,808,255 - 5,832,415 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	4,809,752 - 5,832,188 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	5,214,298 - 5,364,555 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CDH13
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	68,048,655 - 69,213,102 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	68,451,894 - 69,211,534 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	6,608,086 - 7,783,994 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cdh13
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624746	3,698,196 - 4,759,442 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624746	3,696,608 - 4,759,693 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005335462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010004409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000024863 ⟹ ENSSTOP00000020491

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936641	3,931,033 - 4,224,101 (-)	Ensembl

RefSeq Acc Id:

XM_005335462 ⟹ XP_005335519

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024409349	28,171,641 - 28,469,935 (-)	NCBI
SpeTri2.0	NW_004936641	3,925,185 - 4,223,421 (-)	NCBI

Sequence:

show sequence

TGTTCGTGGAGACGACGGATGTCAACGGCAAAACCCTGGAAGGGCCCGTGCCCCTGGAAATCAT
CGTGATCGATCAGAATGACAACAGGCCAACCTTCCGGGAAGGCCCCTACATCGGCCACGTCATG
GAGGGCTCGCCCACAGGGACCACGGTGATGCGGATGACAGCCTTCGACGCAGACGACCCGGCCA
CTGACAACGCCCTCCTGCGGTACAACATCCGTCAGCAGACGCCTGACAAGCCGTCTCCCAACAT
GTTCTACATCGATCCCGAGAAAGGAGACATTGTCACCGTGGTGTCACCCGCGCTGCTGGACCGG
GAGACTCTGGAAAACCCCAAGTACGAGTTGATCATCGAGGCTCAAGACATGGCCGGGCTGGACG
TCGGGTTAACAGGCACGGCCACAGCCACGATCGTGATCGATGACAAAAACGACCACTCGCCAAA
GTTCACCCAGAAAGAGTTTCAAGCCACAGTGGAGGAAGGAGCTGTGGGGGTCATCGTCAATCTG
ACGGTGGAAGACAAGGACGACCCCGCCACGGGCGCGTGGAGGGCTGCCTACACCATCATCAACG
GAAACCCAGGGCAGAGCTTCGAGATCCACACCAACCCCCAGACCAACGAGGGCATGCTCTCCGT
CGTCAAACCCCTGGACTACGAGATCTCCGCCTTCCACACCCTGCTCATCAAAGTGGAGAACGAG
GACCCGCTGGTGCCCGACGTCTCCTATGGCCCCAGCTCCACGGCCACCGTCCACATCACCGTCC
GGGATGTCAACGAGGGTCCAGTCTTCTCCCCGGATCCCATGATGGTGACCAGGCGGGAGAACAT
CTCCGTGGGCAGCGTGCTGCTCACGGCCAACGCCACCGACCCCGACTCCCTGCAGCATCAGACC
ATCAGGTACTCTGTCTACAAGGACCCCGCAGGCTGGCTGAACATCAACCCCATCAATGGCACCG
TGGACACCACAGCCGTGCTGGACCGCGAGTCCCCGTTTGTCCACAACAGCGTGTACACTGCCCT
CTTCCTGGCCATCGACAGTGGCAACCCCCCGGCCACCGGCACCGGGACCCTGCTGATAACCCTG
GAAGACGTGAACGACAACGCTCCCTTCATCTACCCCACGGTGGCCGAGGTCTGTGACGATGCCA
AAAACCTCAGTGTGGTCATTTTGGGAGCCACAGACAAGGACCTTCACCCAAACACAGATCCTTT
CAAGTTTGAGATCCACAAGCCAACCGTCCCTGACCGAGTCTGGAAGATCTCCAAGATCAACAAC
ACCCACGCCCTGGTCAGCCTGCTTCAGAATCTCAACAAGGCCAACTACAACCTGCCCATCATGG
TGACAGATTCAGGGAAGCCGCCCATGACGAACGTCACAGATCTCAGGGTACAAGTGTGTTCCTG
TAAGAATTCCAAAGTGGACTGCAACGCGGCGGGGGCCCTGCGCTGGAGCCTCAGCCCCGTCCTG
CTCCTCTGGCTCTTCAGTCTAGCTTGTCTGTGAGAACTCCTGACATCTGAAGCTTGACTCCCAA
GTTTCCATAGCAACAGGAAAAAGAAAAAAAAAAAAAACCTATCCAAATCTGAAGATTGCCGTTT
ACAGCTATTGAACTTCACAACTAGGCCTCAATTGTTCCAGGTTTCCATTTTCTTTGCGATTTCA
CTTAGTCTGTACTTCACTATTTTGACAGCATCTTCCTTCCTCCTTTAATTAATGGATCCTCTGA
ATTTTTCCTGAGTGTTTATAGATCATGACATAGAACTTGACCTTTGGGAGCAGGAACAATGACT
ACTTTTTCTGATGTGTTGACACGTTGCTAGCCCCTGCTCCTCACATCCAGCTGTGTCTGTGGGT
GCGTATCTGTATATGTATGCGTATCTGTCTGTGTATATACATGGTATTTATAGAGAGAGACTAT
ACAGGAGAAGCCTAGTTTTGATATGCCATTCTTCTTGAAAGGTGAAACAGAGGGGGCAGAAGCT
GAGACAGCTAAACCTCCAAGGCCTCAGTAAAAACCTTGGCACAAGTACAGGCCGCCGAGCAGTC
ACCTCTGTCCTGCAGCCACGTCCCCAGCAGCCCACTCGGTTTGAAGGCTGAATGCTGAATGACC
AGCGGGCAGGTCCCTAGAGAGGCAGGGCAGAGAAGGAAGTCCTTTCTCATTAGTGTGAGGACCG
CCACCAACTCCCACTGCCACCAAATGCCGTGATCCTGAGCCAAGGTGGTGAGGGCAGAGCAGGA
AACCGTGCCATCCAGTGCCAAGGAGGGGCTGCCACACTCCTTCATGGACACCAATGTGCATCGG
TGTGCAGCCTGAACCCAGCGGGACGCTGGCTCTTGTGGCGACTAGGATCGTGGTGGAGAACCTC
CCTTCTGTGCTATGTGCACGACTGCAAATGCCATCAGAGAGGTGAGACGTGCATACCAAGAGGC
CAACAGGTACCATCTTGTATACACATATATGCCCACATGTATAGACATGTATGCACATAAACAC
CGTTTGTTTCATGTATACAGGCATAAAATAGAGTAAATACAGGTAGTTTTAAAAGTACCCTTTT
GTGTGAATTGACTACCGTTGTTTGCGAACCTGAAAATAAAAGACGTTCATTATGTATGAGAAGT
AATTGATTTTTATTCTGTGAGCATGTAAAAGTAAGAGGAAAGTTAGTTCTTGTACTAAGATTAT
CTTCTTGTTGATAAACTGTAAACGAACCATCTGAGCTCACACCAAATTTTTCTATCAAATAAAA
CTAGTGACAGCCTGTGGCTTTTTATTAGAGCTTGCCACGAGCTAGGGTAAGGTAAGTGTCTTAG
CATATTTTAATTCGGTTGCTTACTAAAGGTTTTAACCACACACACACATGCACACCCACGGTTT
CTTATGCAATCTATGTTTGCCCTGTGCTTTTCAGTTAGCCTTTTGTAGGAAGTAGAAGTCACCT
GTTGTCTTTGTTGTAGTGAAATTATGCAGATAGAGTTCCATATATTGTATTTGTTTCAATAGTA
AATCTTTTTGGAACATATAGAATGCAGAGATTTTTTTTCCATTAAAATAAATGGGTATTGGTGG
TTAAAACTG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005335519	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000020491.2
GenBank Protein	KAG3256774	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005335519 ⟸ XM_005335462

- Sequence:

show sequence

MEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLD
RETLENPKYELIIEAQDMAGLDVGLTGTATATIVIDDKNDHSPKFTQKEFQATVEEGAVGVIVN
LTVEDKDDPATGAWRAAYTIINGNPGQSFEIHTNPQTNEGMLSVVKPLDYEISAFHTLLIKVEN
EDPLVPDVSYGPSSTATVHITVRDVNEGPVFSPDPMMVTRRENISVGSVLLTANATDPDSLQHQ
TIRYSVYKDPAGWLNINPINGTVDTTAVLDRESPFVHNSVYTALFLAIDSGNPPATGTGTLLIT
LEDVNDNAPFIYPTVAEVCDDAKNLSVVILGATDKDLHPNTDPFKFEIHKPTVPDRVWKISKIN
NTHALVSLLQNLNKANYNLPIMVTDSGKPPMTNVTDLRVQVCSCKNSKVDCNAAGALRWSLSPV
LLLWLFSLACL

hide sequence

Ensembl Acc Id:

ENSSTOP00000020491 ⟸ ENSSTOT00000024863

Protein Domains

Cadherin

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000028955	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000024863.2	UniProtKB/TrEMBL
Gene3D-CATH	Cadherins	UniProtKB/TrEMBL
InterPro	Cadherin	UniProtKB/TrEMBL
	Cadherin-like_dom	UniProtKB/TrEMBL
	Cadherin-like_sf	UniProtKB/TrEMBL
	Cadherin_CS	UniProtKB/TrEMBL
NCBI Gene	Cdh13	ENTREZGENE
PANTHER	PTHR24027	UniProtKB/TrEMBL
	PTHR24027:SF80	UniProtKB/TrEMBL
Pfam	Cadherin	UniProtKB/TrEMBL
PRINTS	CADHERIN	UniProtKB/TrEMBL
PROSITE	CADHERIN_1	UniProtKB/TrEMBL
	CADHERIN_2	UniProtKB/TrEMBL
SMART	SM00112	UniProtKB/TrEMBL
Superfamily-SCOP	SSF49313	UniProtKB/TrEMBL
UniProt	I3N7Z5_ICTTR	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD