Mmp1a (matrix metallopeptidase 1a (interstitial collagenase)) - Rat Genome Database

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Gene: Mmp1a (matrix metallopeptidase 1a (interstitial collagenase)) Mus musculus
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Symbol: Mmp1a
Name: matrix metallopeptidase 1a (interstitial collagenase)
RGD ID: 1317389
MGI Page MGI
Description: Predicted to enable metalloendopeptidase activity. Predicted to be involved in collagen catabolic process and extracellular matrix organization. Is expressed in several structures, including extraembryonic component and reproductive system. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); female reproductive organ cancer (multiple); intrinsic cardiomyopathy (multiple); obstructive lung disease (multiple); and urinary system cancer (multiple). Orthologous to human MMP1 (matrix metallopeptidase 1).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: collagenase-like A; interstitial collagenase A; matrix metalloproteinase 1a (interstitial collagenase); matrix metalloproteinase-1a; Mco; Mcol-A; Mcola; MMP-1a
RGD Orthologs
Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3997,464,141 - 7,476,870 (+)NCBIGRCm39mm39
GRCm39 Ensembl97,464,141 - 7,476,857 (+)Ensembl
GRCm3897,464,141 - 7,476,869 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl97,464,141 - 7,476,869 (+)EnsemblGRCm38mm10GRCm38
MGSCv3797,464,141 - 7,476,869 (+)NCBIGRCm37mm9NCBIm37
MGSCv3697,464,141 - 7,476,856 (+)NCBImm8
Cytogenetic Map9A1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
abdominal aortic aneurysm  (ISO)
Adult Cerebral Astrocytoma  (ISO)
Airway Obstruction  (ISO)
Amaurosis Fugax  (ISO)
amyotrophic lateral sclerosis  (ISO)
aortic valve stenosis  (ISO)
arteriosclerosis  (ISO)
atherosclerosis  (ISO)
atrial fibrillation  (ISO)
autosomal dominant polycystic kidney disease  (ISO)
Barrett's esophagus  (ISO)
breast cancer  (ISO)
Breast Neoplasms  (EXP)
carotid artery disease  (ISO)
carotid stenosis  (ISO)
cervical cancer  (ISO)
cholesteatoma of middle ear  (ISO)
chronic obstructive pulmonary disease  (ISO)
Chronic Periodontitis  (ISO)
Colorectal Neoplasms  (ISO)
Congenital Nephrotic Syndrome with or without Ocular Abnormalities  (IEP)
congestive heart failure  (ISO)
coronary artery disease  (ISO)
Coronary Disease  (ISO)
COVID-19  (ISO)
degenerative disc disease  (ISO)
dermatomyositis  (IEP)
dilated cardiomyopathy  (ISO)
Dissecting Aneurysm  (ISO)
Emphysema  (ISO)
end stage renal disease  (ISO)
epidermolysis bullosa dystrophica  (ISO)
esophagus adenocarcinoma  (ISO)
exfoliation syndrome  (ISO)
Experimental Arthritis  (ISO)
Experimental Autoimmune Uveitis  (ISO)
Experimental Diabetes Mellitus  (ISO)
Fetal Hypoxia  (ISO)
glomerulosclerosis  (ISO)
Head and Neck Neoplasms  (ISO)
HIV-Associated Lipodystrophy Syndrome  (ISO)
Hyperplasia  (ISO)
hypertension  (ISO)
hypertrophic cardiomyopathy  (ISO)
idiopathic pulmonary fibrosis  (ISO)
immunoglobulin light chain amyloidosis  (ISO)
intermediate coronary syndrome  (ISO)
Kidney Neoplasms  (ISO)
Knee Osteoarthritis  (ISO)
liver cirrhosis  (ISO)
localized scleroderma  (ISO)
lung cancer  (ISO)
Lung Neoplasms  (ISO)
Mammary Neoplasms, Experimental  (ISO)
Multiple Organ Failure  (IEP)
myocardial infarction  (ISO)
Myocardial Reperfusion Injury  (ISO)
Nasal Polyps  (ISO)
nephrotic syndrome  (EXP)
obstructive lung disease  (ISO)
ocular hypertension  (ISO)
osteoarthritis  (ISO)
ovarian cancer  (ISO)
periodontitis  (ISO)
polymyositis  (IEP)
primary open angle glaucoma  (ISO)
psoriatic arthritis  (ISO)
pulmonary emphysema  (ISO)
pulmonary fibrosis  (ISO)
pulmonary hypertension  (ISO)
renal cell carcinoma  (ISO)
renal fibrosis  (ISO)
rheumatoid arthritis  (ISO)
scoliosis  (ISO)
Sepsis  (ISO)
skin melanoma  (ISO)
stomach carcinoma  (ISO)
Stroke  (ISO)
Subarachnoid Hemorrhage  (ISO)
Sudden Hearing Loss  (ISO)
systemic lupus erythematosus  (ISO)
systemic scleroderma  (ISO)
tendinitis  (ISO)
thoracic aortic aneurysm  (ISO)
thrombosis  (ISO)
type 2 diabetes mellitus  (ISO)
ulcerative colitis  (ISO)
urinary bladder cancer  (ISO)
varicose veins  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
1. Aoyama T, etal., Tissue Eng. 2003 Dec;9(6):1289-99.
2. Bostrom P, etal., BMC Cancer. 2011 Aug 11;11:348. doi: 10.1186/1471-2407-11-348.
3. Bradbury PA, etal., Carcinogenesis. 2009 May;30(5):793-8. doi: 10.1093/carcin/bgp065. Epub 2009 Mar 25.
4. Casalechi HL, etal., Lasers Med Sci. 2013 May;28(3):989-95. doi: 10.1007/s10103-012-1189-x. Epub 2012 Aug 28.
5. Cleutjens JP, etal., J Mol Cell Cardiol. 1995 Jun;27(6):1281-92.
6. Cornish TC, etal., J Histochem Cytochem. 2009 Jun 8.
7. Cozzolino M, etal., Nephrol Dial Transplant. 2009 Jul;24(7):2207-12. doi: 10.1093/ndt/gfp061. Epub 2009 Feb 16.
8. de Souza AP, etal., J Clin Periodontol. 2003 Feb;30(2):154-8.
9. Decock J, etal., BMC Cancer. 2008 Mar 20;8:77.
10. DeMeo DL, etal., Am J Respir Crit Care Med. 2007 Jul 1;176(1):42-8. Epub 2007 Mar 15.
11. Duan XH, etal., Zhongguo Zhong Xi Yi Jie He Za Zhi. 2010 Nov;30(11):1197-200.
12. Durkan GC, etal., Clin Cancer Res. 2001 Nov;7(11):3450-6.
13. Eckart RE, etal., J Interv Cardiol. 2004 Feb;17(1):27-31.
14. Ergul A, etal., Am J Hypertens. 2004 Sep;17(9):775-82.
15. Felkin LE, etal., J Heart Lung Transplant. 2006 Dec;25(12):1413-9.
16. Fraser DD, etal., Crit Care Explor. 2020 Jun 22;2(6):e0144. doi: 10.1097/CCE.0000000000000144. eCollection 2020 Jun.
17. Frost J, etal., Rheumatology (Oxford). 2012 Jun;51(6):1049-52. doi: 10.1093/rheumatology/ker367. Epub 2012 Jan 27.
18. Gao J, etal., J Pharm Pharmacol. 2012 Jun;64(6):811-20. doi: 10.1111/j.2042-7158.2012.01490.x. Epub 2012 Apr 5.
19. Gao Z, etal., Zhongguo Zhong Xi Yi Jie He Za Zhi. 2012 Aug;32(8):1103-6.
20. Gerometta R, etal., Invest Ophthalmol Vis Sci. 2010 Jun;51(6):3042-8. doi: 10.1167/iovs.09-4920. Epub 2010 Jan 20.
21. Ghilardi G, etal., Clin Cancer Res. 2001 Aug;7(8):2344-6.
22. Ghilardi G, etal., Clin Cancer Res. 2002 Dec;8(12):3820-3.
23. Ghilardi G, etal., Stroke. 2002 Oct;33(10):2408-12.
24. Gillespie DL, etal., J Surg Res. 2002 Aug;106(2):233-8.
25. Grivas TB, etal., Scoliosis. 2011 May 9;6(1):9. doi: 10.1186/1748-7161-6-9.
26. Herouy Y, etal., J Invest Dermatol. 1998 Nov;111(5):822-7.
27. Herpel E, etal., Histopathology. 2006 May;48(6):736-47.
28. Hirata H, etal., Int J Cancer. 2003 Sep 1;106(3):372-4.
29. Horne BD, etal., Am Heart J. 2007 Oct;154(4):751-8.
30. Hu PF, etal., Phytother Res. 2011 Jun;25(6):878-85. doi: 10.1002/ptr.3359. Epub 2010 Nov 24.
31. Huang CD, etal., J Asthma. 2009 Feb;46(1):41-6.
32. Ikonomidis JS, etal., Circulation. 2006 Jul 4;114(1 Suppl):I365-70.
33. Inoue T, etal., Am J Cardiol. 2003 Dec 15;92(12):1461-4.
34. Itagaki M, etal., J Clin Periodontol. 2004 Sep;31(9):764-9.
35. Jha P, etal., J Biol Chem. 2009 Nov 6;284(45):31401-11. doi: 10.1074/jbc.M109.033381. Epub 2009 Sep 15.
36. Joos L, etal., Hum Mol Genet. 2002 Mar 1;11(5):569-76.
37. Kaden JJ, etal., Cardiovasc Pathol. 2005 Mar-Apr;14(2):80-7.
38. Kanamori Y, etal., Cancer Res. 1999 Sep 1;59(17):4225-7.
39. Kato R, etal., Am J Cardiol. 2005 Jan 1;95(1):90-2.
40. Keeling J and Herrera GA, Kidney Int. 2005 Oct;68(4):1590-603.
41. Keyszer G, etal., J Rheumatol. 1999 Feb;26(2):251-8.
42. Kieseier BC, etal., Brain. 2001 Feb;124(Pt 2):341-51.
43. Klinchid J, etal., Cancer Genet Cytogenet. 2009 Dec;195(2):143-9.
44. Kong YZ, etal., Cardiovasc Res. 2005 Jan 1;65(1):272-82.
45. Koullias GJ, etal., Ann Thorac Surg. 2004 Dec;78(6):2106-10; discussion 2110-1.
46. Kouwenhoven M, etal., J Clin Immunol. 2001 Sep;21(5):365-75.
47. Kowalewski R, etal., J Vasc Res. 2006;43(1):95-100. Epub 2005 Nov 16.
48. Lemaitre V, etal., J Clin Invest. 2001 May;107(10):1227-34.
49. Li H, etal., Zhongguo Zhong Xi Yi Jie He Za Zhi. 2011 Jul;31(7):955-60.
50. Li X, etal., Diabetes Technol Ther. 2010 Jan;12(1):65-73. doi: 10.1089/dia.2009.0085.
51. Lin CC, etal., Clin J Am Soc Nephrol. 2010 Oct;5(10):1805-14. doi: 10.2215/CJN.01500210. Epub 2010 Jul 8.
52. Lin X, etal., Circ J. 2009 Dec;73(12):2315-21. Epub 2009 Oct 2.
53. Liu H, etal., Melanoma Res. 2012 Apr;22(2):169-75. doi: 10.1097/CMR.0b013e32834fc46b.
54. Liu J, etal., Zhonghua Er Bi Yan Hou Ke Za Zhi. 2002 Feb;37(1):30-3.
55. Lombardi F, etal., J Cardiovasc Med (Hagerstown). 2011 Jan;12(1):37-42. doi: 10.2459/JCM.0b013e3283403366.
56. Lombardi R, etal., Circulation. 2003 Sep 23;108(12):1455-60. Epub 2003 Sep 2.
57. Lu Z, etal., J Neurooncol. 2007 Oct;85(1):65-73. Epub 2007 May 15.
58. Luczyszyn SM, etal., Arch Oral Biol. 2012 Jul;57(7):954-63. doi: 10.1016/j.archoralbio.2012.01.013. Epub 2012 Mar 7.
59. Malinsky RR, etal., Eur Arch Otorhinolaryngol. 2013 Mar;270(4):1345-8. doi: 10.1007/s00405-012-2219-9. Epub 2012 Oct 12.
60. McAloon CJ, etal., Ther Adv Respir Dis. 2009 Feb;3(1):23-30.
61. MGD data from the GO Consortium
62. Micheal S, etal., Mol Vis. 2013;19:441-7. Epub 2013 Feb 20.
63. Montes AH, etal., AIDS. 2010 Oct 23;24(16):2499-506. doi: 10.1097/QAD.0b013e32833e922c.
64. Morgan AR, etal., Stroke. 2004 Jun;35(6):1310-5. Epub 2004 Apr 8.
65. Mossbock G, etal., Mol Vis. 2010 Aug 28;16:1764-70.
66. Nakamura T, etal., Am J Nephrol. 2000 Jan-Feb;20(1):32-6.
67. Nam SI, etal., Laryngoscope. 2011 Jan;121(1):171-5. doi: 10.1002/lary.21334.
68. Niebroj-Dobosz I, etal., Eur J Neurol. 2010 Feb;17(2):226-31. doi: 10.1111/j.1468-1331.2009.02775.x. Epub 2009 Oct 1.
69. Nishioka Y, etal., Cancer Lett. 2003 Oct 8;200(1):49-55.
70. OMIM Disease Annotation Pipeline
71. Pearce E, etal., Circ Res. 2005 Nov 11;97(10):1070-6. Epub 2005 Oct 6.
72. Peng B, etal., Mutagenesis. 2010 Jan;25(1):41-8. doi: 10.1093/mutage/gep041. Epub 2009 Oct 20.
73. Piccoli MF, etal., Int Braz J Urol. 2007 Sep-Oct;33(5):622-9.
74. Pipeline to import KEGG annotations from KEGG into RGD
75. Pipeline to import Pathway Interaction Database annotations from NCI into RGD
76. Podesser BK, etal., Am J Physiol Heart Circ Physiol. 2001 Mar;280(3):H984-91.
77. RGD automated import pipeline
78. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
79. RGD automated import pipeline for gene-chemical interactions
80. Rosas IO, etal., PLoS Med. 2008 Apr 29;5(4):e93.
81. Ryu HS, etal., Anticancer Res. 2010 Sep;30(9):3479-86.
82. Schabath MB, etal., Am J Epidemiol. 2005 Mar 1;161(5):412-22.
83. Schwartzkopff B, etal., Eur J Heart Fail. 2002 Aug;4(4):439-4.
84. Silva SM, etal., J Surg Res. 2013 Aug;183(2):777-82. doi: 10.1016/j.jss.2013.02.012. Epub 2013 Mar 4.
85. So JS, etal., Life Sci. 2011 Feb 14;88(7-8):358-66. doi: 10.1016/j.lfs.2010.12.013. Epub 2010 Dec 16.
86. Soell M, etal., J Dent Res. 2002 Mar;81(3):174-8.
87. Solini A, etal., J Hypertens. 2005 Feb;23(2):367-74.
88. Sun DX, etal., PLoS One. 2012;7(7):e41857. doi: 10.1371/journal.pone.0041857. Epub 2012 Jul 30.
89. Tasci AI, etal., BJU Int. 2008 Feb;101(4):503-7. Epub 2007 Nov 6.
90. Titeux M, etal., Hum Mutat. 2008 Feb;29(2):267-76.
91. Tong W, etal., Am J Physiol Heart Circ Physiol. 2011 Nov;301(5):H2113-21. doi: 10.1152/ajpheart.00356.2011. Epub 2011 Aug 19.
92. Toubi E, etal., Clin Exp Rheumatol. 2002 Mar-Apr;20(2):221-4.
93. Uchio K, etal., Nephron. 2000 Oct;86(2):145-51.
94. Ueshima K, etal., Magnes Res. 2003 Jun;16(2):120-6.
95. Volman TJ, etal., J Pathol. 2004 Aug;203(4):968-75.
96. Wang LE, etal., Eur J Cancer. 2011 Jan;47(1):107-15. doi: 10.1016/j.ejca.2010.06.129. Epub 2010 Jul 23.
97. Wang XX, etal., Zhen Ci Yan Jiu. 2009 Aug;34(4):248-51.
98. Wang YD and Wang W, World J Gastroenterol. 2008 Oct 7;14(37):5683-8.
99. Wang YX, etal., J Surg Res. 2014 Jan;186(1):234-9. doi: 10.1016/j.jss.2013.07.047. Epub 2013 Aug 20.
100. Wojciechowski R, etal., Invest Ophthalmol Vis Sci. 2010 Oct;51(10):4989-95. doi: 10.1167/iovs.10-5474. Epub 2010 May 19.
101. Won HY, etal., J Neurosurg Spine. 2009 Dec;11(6):741-8. doi: 10.3171/2009.6.SPINE09198.
102. Wu LM, etal., Zhongguo Wei Zhong Bing Ji Jiu Yi Xue. 2007 Nov;19(11):679-82.
103. Xu JX, etal., Zhong Xi Yi Jie He Xue Bao. 2011 Feb;9(2):186-93.
104. Yang E, etal., Cancer Res. 2009 Aug 1;69(15):6223-31. doi: 10.1158/0008-5472.CAN-09-0187. Epub 2009 Jul 21.
105. Yang Q, etal., World J Gastroenterol. 2005 Aug 28;11(32):4953-6.
106. Yao J, etal., Eur J Cardiothorac Surg. 2012 Nov;42(5):e121-7. doi: 10.1093/ejcts/ezs445.
107. Ye S, etal., Eur Heart J. 2003 Sep;24(18):1668-71.
108. Zhang B, etal., Stroke. 2001 Sep;32(9):2198-202.
109. Zhang BB, etal., World J Gastroenterol. 2003 Nov;9(11):2490-6.
110. Zhang C, etal., Antioxid Redox Signal. 2010 Oct 1;13(7):975-86. doi: 10.1089/ars.2010.3091.
111. Zhao Y, etal., Zhong Nan Da Xue Xue Bao Yi Xue Ban. 2009 Aug;34(8):790-5.
112. Zhu Y, etal., Cancer Res. 2001 Nov 1;61(21):7825-9.
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11113146   PMID:11217851   PMID:12466305   PMID:12466851   PMID:12477932   PMID:12815621   PMID:16141072   PMID:16141073   PMID:17307908  
PMID:18267097   PMID:19853894   PMID:19913533   PMID:21267068   PMID:21873635   PMID:22171010   PMID:22987638   PMID:23085232   PMID:23421805   PMID:23548910   PMID:23565059   PMID:23708660  
PMID:23934123   PMID:24737602   PMID:25352026   PMID:25664857   PMID:33761760  


Genomics

Comparative Map Data
Mmp1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3997,464,141 - 7,476,870 (+)NCBIGRCm39mm39
GRCm39 Ensembl97,464,141 - 7,476,857 (+)Ensembl
GRCm3897,464,141 - 7,476,869 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl97,464,141 - 7,476,869 (+)EnsemblGRCm38mm10GRCm38
MGSCv3797,464,141 - 7,476,869 (+)NCBIGRCm37mm9NCBIm37
MGSCv3697,464,141 - 7,476,856 (+)NCBImm8
Cytogenetic Map9A1NCBI
Mmp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.284,658,588 - 4,679,099 (+)NCBI
Rnor_6.0 Ensembl85,703,206 - 5,723,591 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.085,703,206 - 5,723,593 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.085,706,054 - 5,726,441 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.484,333,773 - 4,354,284 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.184,333,814 - 4,353,725 (+)NCBI
Celera86,218,410 - 6,238,921 (+)NCBICelera
Cytogenetic Map8q11NCBI

Position Markers
Mmp1a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9A1-A2UniSTS
cM Map9 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142326Tgq19_mtriglyceride QTL 19 (mouse)Not determined121060750Mouse
1300899Chol6_mcholesterol 6 (mouse)Not determined9129902908Mouse
13434920Dcollq1_mdifferential colonization level QTL 1 (mouse)9130430544Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:151
Count of miRNA genes:124
Interacting mature miRNAs:141
Transcripts:ENSMUST00000034492
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000034492   ⟹   ENSMUSP00000034492
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl97,464,141 - 7,476,869 (+)Ensembl
RefSeq Acc Id: ENSMUST00000217651   ⟹   ENSMUSP00000151193
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl97,464,141 - 7,476,856 (+)Ensembl
RefSeq Acc Id: NM_032006   ⟹   NP_114395
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3997,464,141 - 7,476,870 (+)NCBI
GRCm3897,464,141 - 7,476,869 (+)ENTREZGENE
MGSCv3797,464,141 - 7,476,869 (+)RGD
cM Map9 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_114395 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI17757 (Get FASTA)   NCBI Sequence Viewer  
  BAC33807 (Get FASTA)   NCBI Sequence Viewer  
  CAC18880 (Get FASTA)   NCBI Sequence Viewer  
  EDL00990 (Get FASTA)   NCBI Sequence Viewer  
  Q9EPL5 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_114395   ⟸   NM_032006
- Peptide Label: preproprotein
- UniProtKB: Q9EPL5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000151193   ⟸   ENSMUST00000217651
RefSeq Acc Id: ENSMUSP00000034492   ⟸   ENSMUST00000034492

Promoters
RGD ID:8668750
Promoter ID:EPDNEW_M12406
Type:single initiation site
Name:Mmp1a_1
Description:Mus musculus matrix metallopeptidase 1a , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3897,464,141 - 7,464,201EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1933846 AgrOrtholog
Ensembl Genes ENSMUSG00000043089 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000151193 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000217651 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 2.110.10.10 UniProtKB/Swiss-Prot
  3.40.390.10 UniProtKB/Swiss-Prot
InterPro Hemopexin-like_dom UniProtKB/Swiss-Prot
  Hemopexin-like_dom_sf UniProtKB/Swiss-Prot
  Hemopexin-like_repeat UniProtKB/Swiss-Prot
  Hemopexin_CS UniProtKB/Swiss-Prot
  M10A_MMP UniProtKB/Swiss-Prot
  MetalloPept_cat_dom_sf UniProtKB/Swiss-Prot
  Pept_M10_metallopeptidase UniProtKB/Swiss-Prot
  Pept_M10A UniProtKB/Swiss-Prot
  Pept_M10A_Zn_BS UniProtKB/Swiss-Prot
  Peptidase_Metallo UniProtKB/Swiss-Prot
  Peptidoglycan-bd-like UniProtKB/Swiss-Prot
  PGBD-like_sf UniProtKB/Swiss-Prot
KEGG Report mmu:83995 UniProtKB/Swiss-Prot
MGD MGI:1933846 ENTREZGENE
NCBI Gene 83995 ENTREZGENE
Pfam Hemopexin UniProtKB/Swiss-Prot
  Peptidase_M10 UniProtKB/Swiss-Prot
  PG_binding_1 UniProtKB/Swiss-Prot
PhenoGen Mmp1a PhenoGen
PIRSF Peptidase_M10A_matrix UniProtKB/Swiss-Prot
PRINTS MATRIXIN UniProtKB/Swiss-Prot
PROSITE CYSTEINE_SWITCH UniProtKB/Swiss-Prot
  HEMOPEXIN UniProtKB/Swiss-Prot
  HEMOPEXIN_2 UniProtKB/Swiss-Prot
  ZINC_PROTEASE UniProtKB/Swiss-Prot
SMART SM00120 UniProtKB/Swiss-Prot
  ZnMc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47090 UniProtKB/Swiss-Prot
  SSF50923 UniProtKB/Swiss-Prot
UniProt MMP1A_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q149J4 UniProtKB/Swiss-Prot