PTGES (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 9 | 54,071,472 - 54,082,232 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 54,071,472 - 54,082,232 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 53,267,891 - 53,278,651 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 54,966,888 - 54,977,655 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 54,966,888 - 54,977,655 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 53,745,854 - 53,756,539 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 54,065,785 - 54,076,457 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 54,159,043 - 54,169,736 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
PTGES (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 9 | 129,738,349 - 129,753,042 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 129,738,331 - 129,753,042 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 9 | 132,500,628 - 132,515,321 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 131,540,433 - 131,555,165 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 9 | 129,580,165 - 129,594,898 | NCBI | | | | | Celera | 9 | 103,151,433 - 103,166,162 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | q34.11 | NCBI | | | | | HuRef | 9 | 102,099,772 - 102,114,492 (-) | NCBI | | HuRef | | | CHM1_1 | 9 | 132,649,284 - 132,663,955 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 141,942,947 - 141,957,638 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Ptges (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 30,779,483 - 30,793,309 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 30,779,483 - 30,819,875 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 30,889,471 - 30,931,020 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 30,889,471 - 30,929,863 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 30,744,991 - 30,758,817 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 30,711,480 - 30,725,306 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 30,594,839 - 30,608,694 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | B | NCBI | | | | | cM Map | 2 | 21.75 | NCBI | | | | |
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Ptges (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 34,575,643 - 34,586,987 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 14,177,892 - 14,189,236 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | UTH_Rnor_SHR_Utx | 3 | 17,250,209 - 17,261,554 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 25,835,203 - 25,846,550 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 24,082,580 - 24,093,932 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 9,727,408 - 9,738,752 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 9,727,408 - 9,738,752 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 15,086,726 - 15,098,070 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 9,946,194 - 9,957,538 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 9,841,561 - 9,852,906 (-) | NCBI | | | | | Celera | 3 | 8,938,064 - 8,949,408 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | p12 | NCBI | | | | |
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Ptges (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955445 | 10,053,745 - 10,056,981 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PTGES (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 11 | 9,572,006 - 9,611,010 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 9,574,355 - 9,613,375 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 100,865,702 - 100,880,408 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 129,522,547 - 129,537,020 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 129,522,547 - 129,537,020 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Ptges (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 197,190,736 - 197,200,389 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936487 | 16,959,231 - 16,968,922 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936487 | 16,959,263 - 16,968,909 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PTGES (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 269,911,789 - 269,924,462 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 269,911,785 - 269,924,481 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 303,779,651 - 303,792,393 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
PTGES (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 12 | 8,393,462 - 8,408,441 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 8,393,550 - 8,408,435 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666079 | 7,033,845 - 7,048,827 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ptges (Heterocephalus glaber - naked mole-rat) |
|