.
amide biosynthetic process - Ontology Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:amide biosynthetic process
go back to main search page
Accession:GO:0043604 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
X

show annotations for term's descendants           Sort by:
amide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pm20d1 peptidase M20 domain containing 1 involved_in ISO
IEA
IBA		 (PMID:27374330)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:27374330 GO_REF:0000033 GO_REF:0000107 NCBI chr13:45,790,161...45,812,206
Ensembl chr13:43,237,971...43,259,999 		JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO
IEA		 (PMID:17371050)
GO_REF:0000107		 RGD
Ensembl		 PMID:17371050 GO_REF:0000107 NCBI chr 8:62,876,003...62,905,080
Ensembl chr 8:53,979,813...54,008,855 		JBrowse link
G Acly ATP citrate lyase involved_in NAS
ISO
IBA
IEA		 (PMID:1371749), (PMID:39881208)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000002		 RGD
GO_Central
Ensembl
InterPro		 PMID:1371749 PMID:39881208 PMID:2295639 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:631761 NCBI chr10:85,912,402...85,964,605
Ensembl chr10:85,412,049...85,463,320 		JBrowse link
G Acss1 acyl-CoA synthetase short-chain family member 1 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:16788062)
GO_REF:0000107
GO_REF:0000033
(PMID:11150295)		 RGD
Ensembl
GO_Central		 PMID:11150295 PMID:16788062 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:159,910,809...159,960,748
Ensembl chr 3:139,450,383...139,500,325 		JBrowse link
G Acss2 acyl-CoA synthetase short-chain family member 2 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:11150295)
GO_REF:0000033		 RGD
GO_Central		 PMID:11150295 GO_REF:0000033 NCBI chr 3:164,464,124...164,507,607
Ensembl chr 3:144,004,336...144,059,675 		JBrowse link
G Dip2a disco-interacting protein 2 homolog A involved_in ISO (PMID:30672040) RGD PMID:30672040 NCBI chr20:12,284,037...12,373,519
Ensembl chr20:12,284,654...12,370,217 		JBrowse link
G Mlycd malonyl-CoA decarboxylase involved_in IDA
IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
GO_REF:0000041
(PMID:10417274), (PMID:10455107), (PMID:9869665)		 Ensembl
GO_Central
UniProt
RGD		 PMID:9869665 PMID:10417274 PMID:10455107 PMID:17316539 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107, RGD:1600790 NCBI chr19:64,356,582...64,372,447
Ensembl chr19:47,447,970...47,463,793 		JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO
IEA		 (PMID:29754768)
GO_REF:0000107		 RGD
Ensembl		 PMID:29754768 GO_REF:0000107 NCBI chr 5:138,308,394...138,312,047
Ensembl chr 5:133,023,121...133,026,933 		JBrowse link
acetyl-CoA biosynthetic process from acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short-chain family member 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:159,910,809...159,960,748
Ensembl chr 3:139,450,383...139,500,325 		JBrowse link
bradykinin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO
IEA		 MGI:1856982 (PMID:12485443)
GO_REF:0000107		 RGD
Ensembl		 PMID:12485443 GO_REF:0000107 NCBI chr 3:130,269,979...130,280,109
Ensembl chr 3:109,816,366...109,828,308 		JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carns1 carnosine synthase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:20097752)
GO_REF:0000002
(PMID:20097752), (PMID:24891507)
GO_REF:0000033		 RGD
InterPro
GO_Central		 PMID:20097752 PMID:24891507 GO_REF:0000002 GO_REF:0000033 NCBI chr 1:201,459,061...201,470,019
Ensembl chr 1:201,459,076...201,469,845 		JBrowse link
ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agk acylglycerol kinase involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:15252046)		 GO_Central
Ensembl
RGD		 PMID:15252046 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:69,114,850...69,193,989
Ensembl chr 4:69,114,269...69,193,934 		JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:17403930)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17403930 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,361,898...54,373,776
Ensembl chr10:53,863,060...53,874,938 		JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22832496)
MGI:5496904 (PMID:22832496)		 UniProt
Ensembl
RGD		 PMID:22832496 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,329,224...54,353,167
Ensembl chr10:53,831,264...53,854,328 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in ISO
ISS		 (PMID:12764132), (PMID:12815059)
GO_REF:0000024		 RGD
UniProt		 PMID:12764132 PMID:12815059 GO_REF:0000024 NCBI chr16:57,669,927...57,701,349
Ensembl chr16:50,966,229...51,008,233 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in ISO
IDA		 (PMID:11278489), (PMID:17475390)
(PMID:21613224)
PMID:15123644		 RGD PMID:11278489 PMID:17475390 PMID:21613224 PMID:15123644 PMID:11278489 RGD:13838793, RGD:13838803 NCBI chr 1:229,865,662...229,973,253
Ensembl chr 1:229,865,662...229,939,162 		JBrowse link
G Casp1 caspase 1 acts_upstream_of_or_within ISO (PMID:35705808) RGD PMID:35705808 NCBI chr 8:10,746,338...10,882,295
Ensembl chr 8:2,587,831...2,597,383 		JBrowse link
G Casp7 caspase 7 acts_upstream_of_or_within ISO (PMID:35705808) RGD PMID:35705808 NCBI chr 1:265,442,647...265,481,938
Ensembl chr 1:255,437,172...255,476,729 		JBrowse link
G Cers1 ceramide synthase 1 involved_in ISO
IEA
IBA		 (PMID:12105227), (PMID:12869556), (PMID:15823095), (PMID:17548428), (PMID:18541923), (PMID:22922758), (PMID:24782409)
GO_REF:0000117
GO_REF:0000002
(PMID:16951403), (PMID:17977534), (PMID:21625621), (PMID:26620563), (PMID:30605666)
GO_REF:0000033		 RGD
UniProt
InterPro
GO_Central		 PMID:12105227 PMID:12869556 PMID:15823095 PMID:16951403 PMID:17548428 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000117 NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,104,466...19,112,519 		JBrowse link
G Cers2 ceramide synthase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:17977534), (PMID:18165233), (PMID:29632068)
GO_REF:0000002
GO_REF:0000117
GO_REF:0000107
(PMID:19801672), (PMID:26620563), (PMID:38961186)
(PMID:15823095)
GO_REF:0000033		 RGD
InterPro
UniProt
Ensembl
GO_Central		 PMID:15823095 PMID:17977534 PMID:18165233 PMID:19801672 PMID:26620563 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 2:182,890,527...182,898,805
Ensembl chr 2:182,890,493...182,933,314 		JBrowse link
G Cers3 ceramide synthase 3 involved_in ISO
IEA
IBA		 (PMID:17977534), (PMID:22038835), (PMID:23754960)
GO_REF:0000117
GO_REF:0000002
(PMID:22038835)
GO_REF:0000033		 RGD
UniProt
InterPro
GO_Central		 PMID:17977534 PMID:22038835 PMID:23754960 GO_REF:0000002 GO_REF:0000033 GO_REF:0000117 NCBI chr 1:120,316,930...120,422,926
Ensembl chr 1:120,318,212...120,422,902 		JBrowse link
G Cers4 ceramide synthase 4 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:17977534), (PMID:29632068)
GO_REF:0000002
GO_REF:0000117
(PMID:12912983), (PMID:15823095)
GO_REF:0000033		 RGD
InterPro
UniProt
GO_Central		 PMID:12912983 PMID:15823095 PMID:17977534 PMID:29632068 GO_REF:0000002 GO_REF:0000033 GO_REF:0000117 NCBI chr12:2,851,784...2,890,244
Ensembl chr12:2,851,784...2,886,828 		JBrowse link
G Cers5 ceramide synthase 5 involved_in ISO
IEA
IBA		 (PMID:16951403), (PMID:29632068)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000117
(PMID:16100120), (PMID:17609214), (PMID:17977534), (PMID:38961186)
GO_REF:0000033		 RGD
Ensembl
InterPro
UniProt
GO_Central		 PMID:16100120 PMID:16951403 PMID:17609214 PMID:17977534 PMID:29632068 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:132,738,834...132,776,920
Ensembl chr 7:130,859,990...130,897,947 		JBrowse link
G Cers6 ceramide synthase 6 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:17609214), (PMID:17977534)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000117
(PMID:23760501), (PMID:26620563)
(PMID:15823095)
GO_REF:0000033		 RGD
Ensembl
InterPro
UniProt
GO_Central		 PMID:15823095 PMID:17609214 PMID:17977534 PMID:23760501 PMID:26620563 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:74,038,520...74,287,544
Ensembl chr 3:53,630,959...53,876,848 		JBrowse link
G Cyp4f39 cytochrome P450, family 4, subfamily f, polypeptide 39 involved_in ISO
IEA
IBA		 (PMID:26056268)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:26056268 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:12,082,821...12,156,076
Ensembl chr 7:11,433,371...11,536,181 		JBrowse link
G Degs1 delta(4)-desaturase, sphingolipid 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:3529540 (PMID:22984457)		 GO_Central
Ensembl
RGD		 PMID:22984457 GO_REF:0000033 GO_REF:0000107 NCBI chr13:93,946,154...93,953,677
Ensembl chr13:93,946,157...93,953,664 		JBrowse link
G Degs1l1 delta(4)-desaturase, sphingolipid 1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:92,772,654...92,818,811
Ensembl chr13:92,772,649...92,818,574 		JBrowse link
G Degs1l2 delta(4)-desaturase, sphingolipid 1 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:95,363,287...95,371,000
Ensembl chr13:92,831,537...92,839,246 		JBrowse link
G Degs2 delta(4)-desaturase, sphingolipid 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:127,596,063...127,613,293
Ensembl chr 6:127,596,071...127,613,293 		JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in ISO (PMID:23689133) RGD PMID:23689133 NCBI chr 5:137,246,781...137,251,351
Ensembl chr 5:131,961,322...131,965,958 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISO
IEA
ISS		 (PMID:15337768)
GO_REF:0000107
(PMID:22517924)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:15337768 PMID:22517924 GO_REF:0000024 GO_REF:0000107 NCBI chr19:56,222,240...56,273,480
Ensembl chr19:39,312,906...39,364,153 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in ISO
IEA		 (PMID:19279011)
GO_REF:0000107		 RGD
Ensembl		 PMID:19279011 GO_REF:0000107 NCBI chr 2:176,902,141...176,916,015
Ensembl chr 2:174,609,403...174,618,263 		JBrowse link
G Gdf1 growth differentiation factor 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr16:19,131,271...19,146,480
Ensembl chr16:19,097,314...19,112,519 		JBrowse link
G Gsdmd gasdermin D acts_upstream_of_or_within ISO (PMID:35705808) RGD PMID:35705808 NCBI chr 7:109,423,209...109,427,771
Ensembl chr 7:107,542,083...107,547,055 		JBrowse link
G Gzmb granzyme B acts_upstream_of_or_within ISO (PMID:35705808) RGD PMID:35705808 NCBI chr15:34,459,007...34,462,469
Ensembl chr15:30,173,603...30,346,814 		JBrowse link
G Mecr mitochondrial trans-2-enoyl-CoA reductase acts_upstream_of ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:37653044)		 UniProt
Ensembl
RGD		 PMID:37653044 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:149,313,765...149,339,964
Ensembl chr 5:144,029,731...144,055,863 		JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within ISO
IEA		 (PMID:16325464)
GO_REF:0000107		 RGD
Ensembl		 PMID:16325464 GO_REF:0000107 NCBI chr10:58,117,107...58,132,167
Ensembl chr10:57,618,586...57,633,623 		JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (PMID:16325464) RGD PMID:16325464 NCBI chr12:39,550,531...39,594,984
Ensembl chr12:33,879,745...33,934,619 		JBrowse link
G Pnpla1 patatin-like phospholipase domain containing 1 involved_in ISO (PMID:27751867) RGD PMID:27751867 NCBI chr20:6,917,993...6,952,157
Ensembl chr20:6,917,931...6,952,375 		JBrowse link
G Prf1 perforin 1 acts_upstream_of_or_within ISO (PMID:35705808) RGD PMID:35705808 NCBI chr20:29,789,040...29,794,550
Ensembl chr20:29,246,202...29,251,701 		JBrowse link
G Samd8 sterile alpha motif domain containing 8 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:19506037)
GO_REF:0000107
MGI:5749225 (PMID:25605874), (PMID:25667419)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:19506037 PMID:25605874 PMID:25667419 GO_REF:0000033 GO_REF:0000107 NCBI chr15:2,512,104...2,562,368
Ensembl chr15:2,512,105...2,515,379
Ensembl chr15:2,512,105...2,515,379 		JBrowse link
G Sgms1 sphingomyelin synthase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:25605874)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:25605874 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:239,409,991...239,681,195
Ensembl chr 1:229,998,119...230,259,603 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:4818459 (PMID:25605874)		 GO_Central
Ensembl
RGD		 PMID:25605874 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:219,889,809...219,967,704
Ensembl chr 2:219,893,572...219,967,546 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in IMP
IEA
ISO
IBA		 GO_REF:0000117
GO_REF:0000107
(PMID:35705808), (PMID:8706124)
GO_REF:0000033
(PMID:17303575), (PMID:18815062), (PMID:19279011), (PMID:20807762), (PMID:33163980), (PMID:8706124)		 UniProt
Ensembl
RGD
GO_Central		 PMID:8706124 PMID:17303575 PMID:18815062 PMID:19279011 PMID:20807762 More... GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:1601344 NCBI chr 1:169,304,772...169,308,615
Ensembl chr 1:159,892,859...159,896,794 		JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12473648 GO_REF:0000033, RGD:1581395 NCBI chr20:46,568,627...46,571,741
Ensembl chr20:44,986,231...44,989,441 		JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 involved_in ISO
IEA
IBA		 (PMID:16517606), (PMID:25180167)
GO_REF:0000107
(PMID:25180167)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:16517606 PMID:25180167 GO_REF:0000033 GO_REF:0000107 NCBI chr11:96,866,805...96,890,520
Ensembl chr11:83,362,534...83,386,250 		JBrowse link
G Smpd5 sphingomyelin phosphodiesterase 5 involved_in ISO
IEA		 (PMID:21183079)
GO_REF:0000107		 RGD
Ensembl		 PMID:21183079 GO_REF:0000107 NCBI chr 7:109,889,532...109,892,428
Ensembl chr 7:108,009,173...108,011,763 		JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:25691431)
GO_REF:0000107
MGI:3815115 (PMID:16216550)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:16216550 PMID:25691431 GO_REF:0000033 GO_REF:0000107 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:25691431)
GO_REF:0000107
MGI:3815117 (PMID:16216550)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:16216550 PMID:25691431 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:106,950,949...107,031,542 		JBrowse link
G Sptlc3 serine palmitoyltransferase, long chain base subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:147,301,570...147,431,696
Ensembl chr 3:126,847,878...126,978,010 		JBrowse link
G Sptssa serine palmitoyltransferase, small subunit A acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:25691431)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:25691431 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:77,879,931...77,891,344
Ensembl chr 6:72,144,714...72,156,214 		JBrowse link
G Sptssb serine palmitoyltransferase, small subunit B acts_upstream_of_or_within ISO MGI:5689843 (PMID:26438849) RGD PMID:26438849 NCBI chr 2:154,133,728...154,162,127
Ensembl chr 2:154,133,733...154,163,120 		JBrowse link
G Tlcd3b TLC domain containing 3B involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:23275342)		 GO_Central
Ensembl
RGD		 PMID:23275342 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:190,851,582...190,870,278
Ensembl chr 1:181,422,830...181,439,743 		JBrowse link
coenzyme A biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO
IEA		 (PMID:17371050)
GO_REF:0000107		 RGD
Ensembl		 PMID:17371050 GO_REF:0000107 NCBI chr 8:62,876,003...62,905,080
Ensembl chr 8:53,979,813...54,008,855 		JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in ISO
IEA		 (PMID:10578051)
GO_REF:0000107		 RGD
Ensembl		 PMID:10578051 GO_REF:0000107 NCBI chr 5:167,969,284...168,062,033
Ensembl chr 5:162,684,645...162,779,309 		JBrowse link
G Coasy Coenzyme A synthase involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:11923312)
GO_REF:0000002
GO_REF:0000107
(PMID:11980892)
GO_REF:0000033		 RGD
InterPro
Ensembl
GO_Central		 PMID:11923312 PMID:11980892 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr10:86,014,566...86,018,849
Ensembl chr10:86,014,597...86,018,841 		JBrowse link
G Dcakd dephospho-CoA kinase domain containing involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr10:88,457,829...88,489,011
Ensembl chr10:87,957,740...87,980,054 		JBrowse link
G Pank1 pantothenate kinase 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000107
MGI:1921700 (PMID:10625688), (PMID:22815849)
MGI:2176050|MGI:4462018 (PMID:20559429), (PMID:22815849)		 GO_Central
InterPro
Ensembl
RGD		 PMID:10625688 PMID:20559429 PMID:22815849 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:241,737,371...241,808,126
Ensembl chr 1:232,328,430...232,396,829 		JBrowse link
G Pank2 pantothenate kinase 2 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
GO_REF:0000002
MGI:2176050|MGI:5446719 (PMID:22815849)
MGI:1922985|MGI:3514020 (PMID:22815849), (PMID:24316510)		 GO_Central
Ensembl
InterPro
RGD		 PMID:22815849 PMID:24316510 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:138,936,448...138,974,196
Ensembl chr 3:118,483,444...118,518,320 		JBrowse link
G Pank3 pantothenate kinase 3 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:20797618), (PMID:30927326)
GO_REF:0000002
GO_REF:0000107
(PMID:16040613)
GO_REF:0000033		 RGD
InterPro
Ensembl
GO_Central		 PMID:16040613 PMID:20797618 PMID:30927326 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr10:20,733,191...20,757,017
Ensembl chr10:20,229,129...20,252,955 		JBrowse link
G Pank4 pantothenate kinase 4 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000002
GO_REF:0000043
GO_REF:0000033		 UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 NCBI chr 5:170,807,744...170,824,478
Ensembl chr 5:165,525,402...165,542,135 		JBrowse link
G Ppcdc phosphopantothenoylcysteine decarboxylase involved_in ISO
IEA
IBA		 (PMID:11923312)
GO_REF:0000043
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:11923312 GO_REF:0000033 GO_REF:0000043 NCBI chr 8:57,815,195...57,842,863
Ensembl chr 8:57,815,195...58,000,570 		JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO
IEA
IBA		 (PMID:11923312), (PMID:29754768)
GO_REF:0000107
GO_REF:0000117
GO_REF:0000033		 RGD
Ensembl
UniProt
GO_Central		 PMID:11923312 PMID:29754768 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 5:138,308,394...138,312,047
Ensembl chr 5:133,023,121...133,026,933 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769 		JBrowse link
fatty acid primary amide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pam peptidylglycine alpha-amidating monooxygenase involved_in IDA PMID:10079066 UniProt PMID:10079066 RGD:14390048 NCBI chr 9:105,445,812...105,719,287
Ensembl chr 9:98,122,916...98,271,965 		JBrowse link
fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcdh glutaryl-CoA dehydrogenase involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:6895440 GO_REF:0000033, RGD:1598697 NCBI chr19:40,168,038...40,174,536
Ensembl chr19:23,263,264...23,269,681 		JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 Beta-1,3-galactosyltransferase 1 involved_in ISO (PMID:9582303) RGD PMID:9582303 NCBI chr 3:72,661,410...73,234,447
Ensembl chr 3:52,253,618...52,825,313 		JBrowse link
G B3galt2 Beta-1,3-galactosyltransferase 2 involved_in ISO
IEA		 (PMID:9582303)
GO_REF:0000107		 RGD
Ensembl		 PMID:9582303 GO_REF:0000107 NCBI chr13:57,939,724...57,948,735
Ensembl chr13:55,389,406...55,398,419 		JBrowse link
G B4galt3 beta-1,4-galactosyltransferase 3 involved_in ISO
IBA
IEA		 (PMID:9405390)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:9405390 GO_REF:0000033 GO_REF:0000107 NCBI chr13:83,691,378...83,697,448
Ensembl chr13:83,691,446...83,697,448 		JBrowse link
G Fa2h fatty acid 2-hydroxylase involved_in ISS
IEA
ISO
IMP		 GO_REF:0000024
GO_REF:0000107
(PMID:15658937), (PMID:18815260)
PMID:17901466
GO_REF:0000041		 UniProt
Ensembl
RGD		 PMID:15658937 PMID:18815260 PMID:17901466 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107, RGD:13825191 NCBI chr19:56,222,240...56,273,480
Ensembl chr19:39,312,906...39,364,153 		JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
(PMID:10727929)		 GO_Central
Ensembl
RGD		 PMID:10727929 GO_REF:0000033 GO_REF:0000107 NCBI chr14:83,094,265...83,109,992
Ensembl chr14:78,870,793...78,886,388 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in IDA
IBA
IEA		 PMID:8713090
GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt		 PMID:8713090 GO_REF:0000033 GO_REF:0000041, RGD:39458006 NCBI chr 2:216,938,884...217,007,167
Ensembl chr 2:214,264,483...214,332,660 		JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt4 Beta-1,3-galactosyltransferase 4 involved_in ISO (PMID:9582303) RGD PMID:9582303 NCBI chr20:4,937,974...4,939,549
Ensembl chr20:4,931,768...4,938,315 		JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO
IBA
IDA		 GO_REF:0000024
GO_REF:0000107
(PMID:8855236)
MGI:2158349|MGI:96074 (PMID:10021458)
GO_REF:0000033
PMID:3140234
(PMID:1601877), (PMID:7487055), (PMID:7890749)		 UniProt
Ensembl
RGD
GO_Central		 PMID:1601877 PMID:7487055 PMID:7890749 PMID:8855236 PMID:10021458 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:21201261 NCBI chr 7:64,873,909...64,881,512
Ensembl chr 7:62,988,930...62,996,190 		JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:244,789,627...245,304,975
Ensembl chr 2:242,129,763...242,645,133 		JBrowse link
G St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:15,872,230...15,885,250
Ensembl chr 3:15,872,532...15,885,243 		JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:244,398,604...244,571,100
Ensembl chr 2:241,742,688...241,911,208 		JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:10702226)		 GO_Central
RGD		 PMID:10702226 GO_REF:0000033 NCBI chr 3:36,283,573...36,305,217
Ensembl chr 3:15,885,968...15,907,496 		JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in ISO
IEA		 (PMID:10766765)
GO_REF:0000107		 RGD
Ensembl		 PMID:10766765 GO_REF:0000107 NCBI chr 1:127,762,573...127,838,017
Ensembl chr 1:127,762,573...127,838,091 		JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in ISO
IEA		 (PMID:10766765)
GO_REF:0000107
(PMID:7782326)		 RGD
Ensembl		 PMID:7782326 PMID:10766765 GO_REF:0000107 NCBI chr18:60,024,555...60,031,050
Ensembl chr18:57,754,347...57,760,839 		JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in ISO
IEA		 (PMID:10766765)
GO_REF:0000107		 RGD
Ensembl		 PMID:10766765 GO_REF:0000107 NCBI chr 9:103,437,479...103,532,008
Ensembl chr 9:95,993,503...96,084,653 		JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in ISO
IEA		 (PMID:11980897)
GO_REF:0000107		 RGD
Ensembl		 PMID:11980897 GO_REF:0000107 NCBI chr17:81,649,866...81,847,970
Ensembl chr17:76,745,224...76,884,299 		JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt5 beta-1,4-galactosyltransferase 5 involved_in ISO
IEA		 (PMID:30114188)
GO_REF:0000107		 RGD
Ensembl		 PMID:30114188 GO_REF:0000107 NCBI chr 3:176,437,073...176,453,001
Ensembl chr 3:156,018,053...156,070,074 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:30114188)		 UniProt
Ensembl
RGD		 PMID:30114188 GO_REF:0000024 GO_REF:0000107 NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247 		JBrowse link
G C3h20orf173 similar to human chromosome 20 open reading frame 173 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:144,514,060...144,524,979
Ensembl chr 3:144,519,930...144,524,920 		JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in ISO
IEA
IBA		 (PMID:8027041)
GO_REF:0000117
GO_REF:0000107
(PMID:8144500)
GO_REF:0000033		 RGD
UniProt
Ensembl
GO_Central		 PMID:8027041 PMID:8144500 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr 7:98,845,270...98,913,409
Ensembl chr 7:98,845,270...98,913,236 		JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IDA
IEA
ISO
IBA		 PMID:8144500
GO_REF:0000107
(PMID:22735313), (PMID:8144500)
GO_REF:0000033
GO_REF:0000117
(PMID:8920913)		 Ensembl
RGD
GO_Central
UniProt		 PMID:8144500 PMID:8920913 PMID:22735313 PMID:8144500 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:68307 NCBI chr19:55,798,112...55,849,226
Ensembl chr19:38,923,999...38,939,869 		JBrowse link
G St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:22735313)		 Ensembl
RGD		 PMID:22735313 GO_REF:0000107 NCBI chr 5:131,470,348...131,670,794
Ensembl chr 5:131,470,348...131,670,810 		JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fa2h fatty acid 2-hydroxylase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21628453)		 UniProt
Ensembl
RGD		 PMID:21628453 GO_REF:0000024 GO_REF:0000107 NCBI chr19:56,222,240...56,273,480
Ensembl chr19:39,312,906...39,364,153 		JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase involved_in ISO
IEA
IBA
ISS		 (PMID:8643456)
GO_REF:0000107
(PMID:10430909), (PMID:16109770), (PMID:22851168), (PMID:23748427)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:8643456 PMID:10430909 PMID:16109770 PMID:22851168 PMID:23748427 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:74,032,978...74,065,701
Ensembl chr 5:74,032,978...74,065,393 		JBrowse link
glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cryaa crystallin, alpha A acts_upstream_of_or_within ISO (PMID:22442691) RGD PMID:22442691 NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349 		JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit involved_in
acts_upstream_of_or_within		 IMP
IEA
ISO
IBA
ISS		 GO_REF:0000002
GO_REF:0000107
GO_REF:0000104
GO_REF:0000043
GO_REF:0000117
MGI:2387010 (PMID:10805773), (PMID:16081425)
GO_REF:0000033
GO_REF:0000041
(PMID:10395918), (PMID:12663448), (PMID:8104187), (PMID:9675072)
GO_REF:0000024		 InterPro
Ensembl
UniProt
RGD
GO_Central		 PMID:8104187 PMID:9675072 PMID:10395918 PMID:10805773 PMID:12663448 More... GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117, RGD:1582661 NCBI chr 8:87,510,251...87,548,896
Ensembl chr 8:78,630,127...78,668,544 		JBrowse link
G Gclm glutamate cysteine ligase, modifier subunit involved_in
acts_upstream_of_or_within		 IMP
IEA
ISO
IBA
ISS		 GO_REF:0000107
GO_REF:0000043
GO_REF:0000002
(PMID:16081425)
GO_REF:0000033
GO_REF:0000041
(PMID:10395918), (PMID:12081989), (PMID:9675072)
GO_REF:0000024		 Ensembl
UniProt
InterPro
RGD
GO_Central		 PMID:9675072 PMID:10395918 PMID:12081989 PMID:16081425 PMID:16183645 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107, RGD:1582661 NCBI chr 2:213,032,135...213,052,192
Ensembl chr 2:210,347,482...210,367,535 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in IEA
ISO		 GO_REF:0000107
GO_REF:0000043
(PMID:12468440)		 Ensembl
UniProt
RGD		 PMID:12468440 GO_REF:0000043 GO_REF:0000107 NCBI chr20:13,074,141...13,103,551
Ensembl chr20:13,074,700...13,108,442 		JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:13,043,255...13,071,523
Ensembl chr20:13,043,257...13,071,450 		JBrowse link
G Ggt6 gamma-glutamyl transferase 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:57,051,977...57,054,900
Ensembl chr10:57,051,825...57,067,260 		JBrowse link
G Ggt7 gamma-glutamyltransferase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:143,978,073...144,004,597
Ensembl chr 3:143,978,082...144,001,492 		JBrowse link
G Gss glutathione synthetase involved_in IDA
IEA		 GO_REF:0000002
GO_REF:0000043
GO_REF:0000041		 InterPro
UniProt
RGD		 PMID:10964706 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043, RGD:1599340 NCBI chr 3:144,047,849...144,078,197
Ensembl chr 3:144,047,850...144,078,198 		JBrowse link
G Hagh hydroxyacyl glutathione hydrolase involved_in IEA
ISO		 GO_REF:0000107
(PMID:8550579)		 Ensembl
RGD		 PMID:8550579 GO_REF:0000107 NCBI chr10:14,379,400...14,394,046
Ensembl chr10:13,875,241...13,889,504 		JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in ISO
IEA		 (PMID:8703034)
GO_REF:0000107		 RGD
Ensembl		 PMID:8703034 GO_REF:0000107 NCBI chr 2:137,821,787...137,866,664
Ensembl chr 2:135,693,557...135,715,828 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO
IEA		 (PMID:12614333)
GO_REF:0000107		 RGD
Ensembl		 PMID:12614333 GO_REF:0000107 NCBI chr 1:235,963,455...236,043,572
Ensembl chr 1:226,549,842...226,630,402 		JBrowse link
G Slc1a2 solute carrier family 1 member 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:12614333)		 Ensembl
RGD		 PMID:12614333 GO_REF:0000107 NCBI chr 3:109,460,109...109,590,445
Ensembl chr 3:89,005,129...89,126,498 		JBrowse link
L-asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:36,752,061...36,769,970
Ensembl chr 4:35,785,237...35,803,423 		JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt4 beta-1,4-galactosyltransferase 4 involved_in ISO
IEA
ISS		 (PMID:9792633)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:9792633 GO_REF:0000024 GO_REF:0000107 NCBI chr11:61,995,807...62,021,751
Ensembl chr11:61,995,814...62,021,671 		JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 involved_in ISO
IEA		 (PMID:10320813)
GO_REF:0000107		 RGD
Ensembl		 PMID:10320813 GO_REF:0000107 NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247 		JBrowse link
leukotriene D4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:14754911), (PMID:21447318) RGD PMID:14754911 PMID:21447318 NCBI chr20:13,074,141...13,103,551
Ensembl chr20:13,074,700...13,108,442 		JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA
ISS		 (PMID:1676842), (PMID:21447318)
GO_REF:0000107
MGI:2182354 (PMID:12163373), (PMID:9774450)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:1676842 PMID:9774450 PMID:12163373 PMID:21447318 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:13,043,255...13,071,523
Ensembl chr20:13,043,257...13,071,450 		JBrowse link
long-chain fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl1 acyl-CoA synthetase long-chain family member 1 involved_in IGI
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:16466685 GO_REF:0000033, RGD:2312800 NCBI chr16:52,487,870...52,554,110
Ensembl chr16:45,755,254...45,821,541 		JBrowse link
G Acsl4 acyl-CoA synthetase long-chain family member 4 IGI RGD PMID:16466685 RGD:2312800 NCBI chr  X:110,739,633...110,803,416
Ensembl chr  X:105,942,799...106,006,427 		JBrowse link
G Acsl5 acyl-CoA synthetase long-chain family member 5 involved_in IGI
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:16466685 GO_REF:0000033, RGD:2312800 NCBI chr 1:264,294,851...264,341,943
Ensembl chr 1:254,292,521...254,336,607 		JBrowse link
G Acsl6 acyl-CoA synthetase long-chain family member 6 involved_in IGI
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:16466685 GO_REF:0000033, RGD:2312800 NCBI chr10:38,940,668...38,999,515
Ensembl chr10:38,440,080...38,498,757 		JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:137,246,781...137,251,351
Ensembl chr 5:131,961,322...131,965,958 		JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:254,938,731...254,942,559
Ensembl chr 1:244,997,287...245,001,115 		JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:93,582,930...93,609,479
Ensembl chr 8:84,702,362...84,729,697 		JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:78,790,846...78,857,307
Ensembl chr 8:78,790,846...78,857,284 		JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:220,738,095...220,845,528
Ensembl chr 2:218,063,804...218,171,186 		JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:41,522,695...41,592,021
Ensembl chr 2:39,789,250...39,856,845 		JBrowse link
malonyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaca acetyl-CoA carboxylase alpha involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:69,511,627...69,773,888
Ensembl chr10:69,014,170...69,276,457 		JBrowse link
G Acacb acetyl-CoA carboxylase beta involved_in IEA
ISO		 GO_REF:0000041
(PMID:18487439)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:18487439 GO_REF:0000041 GO_REF:0000107 NCBI chr12:48,026,394...48,138,214
Ensembl chr12:42,366,548...42,457,655 		JBrowse link
melatonin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aanat aralkylamine N-acetyltransferase involved_in TAS
ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:11313340)
GO_REF:0000041
GO_REF:0000033
GO_REF:0000043
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:11313340 PMID:9054387 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107, RGD:67926 NCBI chr10:101,827,072...101,831,805
Ensembl chr10:101,827,301...101,831,801 		JBrowse link
G Asmt acetylserotonin O-methyltransferase involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO
IBA		 GO_REF:0000043
(PMID:20308563), (PMID:3941912)
GO_REF:0000033
(PMID:22775292)
GO_REF:0000041		 UniProt
RGD
GO_Central		 PMID:3941912 PMID:20308563 PMID:22775292 PMID:8930356 PMID:12198599 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043, RGD:1299464, RGD:1359073 NCBI chr12:16,304,719...16,309,568
Ensembl chr12:16,304,719...16,309,568 		JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase involved_in TAS
IEA
ISO
IC		 GO_REF:0000107
MGI:2182685|MGI:3713799 (PMID:11929971), (PMID:17549255)
(PMID:14707127), (PMID:31121216)
PMID:9305887		 Ensembl
RGD		 PMID:11929971 PMID:14707127 PMID:17549255 PMID:31121216 PMID:15330759 More... GO_REF:0000107, RGD:1358725, RGD:401901241 NCBI chr 5:58,267,189...58,307,396
Ensembl chr 5:58,267,210...58,307,499 		JBrowse link
G Nanp N-acetylneuraminic acid phosphatase involved_in ISO
IBA
IDA		 (PMID:16237198)
GO_REF:0000033		 RGD
GO_Central		 PMID:16237198 PMID:16237198 GO_REF:0000033, RGD:8554804 NCBI chr 3:139,826,549...139,841,655
Ensembl chr 3:139,826,549...139,841,648 		JBrowse link
G Nans N-acetylneuraminate synthase involved_in ISO
IEA		 (PMID:31121216)
GO_REF:0000107		 RGD
Ensembl		 PMID:31121216 GO_REF:0000107 NCBI chr 5:60,780,441...60,797,583
Ensembl chr 5:60,780,392...60,814,950 		JBrowse link
negative regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgk1 phosphoglycerate kinase 1 involved_in ISO
IEA		 (PMID:26942675)
GO_REF:0000107		 RGD
Ensembl		 PMID:26942675 GO_REF:0000107 NCBI chr  X:75,336,988...75,352,962
Ensembl chr  X:71,271,440...71,287,418 		JBrowse link
G Pgk1l1 phosphoglycerate kinase 1 like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:44,487,980...44,489,330
Ensembl chr 2:42,754,639...42,755,856 		JBrowse link
negative regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of_or_within ISO (PMID:25691431) RGD PMID:25691431 NCBI chr 9:48,243,365...48,253,316
Ensembl chr 9:48,237,572...48,253,211 		JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 acts_upstream_of_or_within ISO
IEA		 (PMID:25691431)
GO_REF:0000107		 RGD
Ensembl		 PMID:25691431 GO_REF:0000107 NCBI chr 7:1,247,869...1,250,999
Ensembl chr 7:1,246,479...1,250,907 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of_or_within ISO (PMID:25691431) RGD PMID:25691431 NCBI chr10:83,590,052...83,596,035
Ensembl chr10:83,590,071...83,598,620 		JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:16118219)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:16118219 GO_REF:0000024 GO_REF:0000107 NCBI chr10:102,257,413...102,263,086
Ensembl chr10:101,758,711...101,764,240 		JBrowse link
omega-hydroxyceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpla1 patatin-like phospholipase domain containing 1 involved_in ISO (PMID:28248318)
(PMID:28248300)		 RGD PMID:28248300 PMID:28248318 NCBI chr20:6,917,993...6,952,157
Ensembl chr20:6,917,931...6,952,375 		JBrowse link
positive regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO (PMID:19364818) RGD PMID:19364818 NCBI chr 2:237,222,730...237,225,689
Ensembl chr 2:234,562,408...234,565,484 		JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21177474)		 UniProt
RGD		 PMID:21177474 GO_REF:0000024 NCBI chr10:104,740,763...104,745,760
Ensembl chr10:104,242,223...104,246,589 		JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:18936091 GO_REF:0000033, RGD:6482750 NCBI chr 7:112,731,803...112,771,978
Ensembl chr 7:110,851,378...110,891,114 		JBrowse link
G Prkcd protein kinase C, delta involved_in ISO
IEA		 (PMID:19279011)
GO_REF:0000107		 RGD
Ensembl		 PMID:19279011 GO_REF:0000107 NCBI chr16:5,775,681...5,806,122
Ensembl chr16:5,769,215...5,799,352 		JBrowse link
G Sirt3 sirtuin 3 involved_in ISO (PMID:26620563) RGD PMID:26620563 NCBI chr 1:205,371,703...205,394,145
Ensembl chr 1:195,942,073...195,964,808 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 IMP RGD PMID:20096352 RGD:10041064 NCBI chr19:51,072,209...51,155,639
Ensembl chr19:34,162,341...34,245,749 		JBrowse link
G Sphk2 sphingosine kinase 2 involved_in ISO
IEA		 (PMID:16118219)
GO_REF:0000107		 RGD
Ensembl		 PMID:16118219 GO_REF:0000107 NCBI chr 1:105,317,332...105,324,985
Ensembl chr 1:96,180,887...96,188,391 		JBrowse link
G Znf750 zinc finger protein 750 acts_upstream_of_or_within ISO
IEA		 MGI:7470773 (PMID:37115925)
GO_REF:0000107		 RGD
Ensembl		 PMID:37115925 GO_REF:0000107 NCBI chr10:107,270,926...107,279,904
Ensembl chr10:106,772,669...106,781,200 		JBrowse link
positive regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (PMID:14978030) RGD PMID:14978030 NCBI chr 4:104,363,838...104,425,271
Ensembl chr 4:102,805,510...102,866,911 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO
IEA		 (PMID:14978030)
GO_REF:0000107		 RGD
Ensembl		 PMID:14978030 GO_REF:0000107 NCBI chr 3:81,001,529...81,031,165
Ensembl chr 3:60,594,242...60,621,737 		JBrowse link
propionyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO
IEA		 (PMID:17371050)
GO_REF:0000107		 RGD
Ensembl		 PMID:17371050 GO_REF:0000107 NCBI chr 8:62,876,003...62,905,080
Ensembl chr 8:53,979,813...54,008,855 		JBrowse link
pyruvate decarboxylation to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase involved_in IDA
IEA
ISO
IBA		 GO_REF:0000107
GO_REF:0000002
GO_REF:0000117
MGI:2386703 (PMID:17314311), (PMID:27621431)
GO_REF:0000033
(PMID:24534072)		 Ensembl
InterPro
UniProt
RGD
GO_Central		 PMID:17314311 PMID:24534072 PMID:27621431 PMID:7487891 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:1599112 NCBI chr 8:50,979,151...51,004,435
Ensembl chr 8:50,978,051...51,004,479
Ensembl chr 1:50,978,051...51,004,479 		JBrowse link
G Dld dihydrolipoamide dehydrogenase involved_in IDA
IEA
ISO		 GO_REF:0000107
MGI:2386703 (PMID:17314311), (PMID:27621431)
(PMID:24534072)		 Ensembl
RGD		 PMID:17314311 PMID:24534072 PMID:27621431 PMID:7487891 GO_REF:0000107, RGD:1599112 NCBI chr 6:53,631,686...53,655,059
Ensembl chr 6:47,903,914...47,924,795 		JBrowse link
G Mpc1 mitochondrial pyruvate carrier 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:22628558) RGD PMID:22628558 NCBI chr 1:54,985,305...54,996,979
Ensembl chr 1:52,437,741...52,449,400 		JBrowse link
G Mpc2 mitochondrial pyruvate carrier 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:22628558)
GO_REF:0000107
MGI:5635078 (PMID:22628558), (PMID:24910426)		 RGD
Ensembl		 PMID:22628558 PMID:24910426 GO_REF:0000107 NCBI chr13:80,261,143...80,280,668
Ensembl chr13:77,728,250...77,747,664 		JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO
IBA		 GO_REF:0000002
GO_REF:0000117
MGI:2182095|MGI:2386703 (PMID:18586888)
GO_REF:0000033
GO_REF:0000114
(PMID:19081061), (PMID:24534072)		 InterPro
UniProt
RGD
GO_Central
ComplexPortal		 PMID:18586888 PMID:19081061 PMID:24534072 PMID:7487891 GO_REF:0000002 GO_REF:0000033 GO_REF:0000114 GO_REF:0000117, RGD:1599112 NCBI chr  X:38,509,158...38,522,986
Ensembl chr  X:34,700,409...34,714,311 		JBrowse link
G Pdha1l1 pyruvate dehydrogenase (lipoamide) alpha 1-like 1 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000117
GO_REF:0000002		 GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000117 NCBI chr16:82,511,483...82,514,378
Ensembl chr16:82,511,511...82,514,372 		JBrowse link
G Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 involved_in IDA
IEA
IBA		 GO_REF:0000117
GO_REF:0000002
GO_REF:0000033		 UniProt
InterPro
GO_Central
RGD		 PMID:7487891 GO_REF:0000002 GO_REF:0000033 GO_REF:0000117, RGD:1599112 NCBI chr 2:232,545,550...232,547,098 JBrowse link
G Pdhb pyruvate dehydrogenase E1 subunit beta involved_in IDA
IBA
ISO
IEA		 GO_REF:0000033
GO_REF:0000114
GO_REF:0000002
(PMID:19081061), (PMID:24534072)
GO_REF:0000107		 GO_Central
ComplexPortal
InterPro
RGD
Ensembl		 PMID:19081061 PMID:24534072 PMID:7487891 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000114, RGD:1599112 NCBI chr15:16,752,561...16,758,503
Ensembl chr15:16,750,980...16,758,500 		JBrowse link
G Pdhx pyruvate dehydrogenase complex, component X involved_in ISO
IEA		 (PMID:24534072)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000117
MGI:2386703 (PMID:17314311), (PMID:27621431)		 RGD
Ensembl
InterPro
UniProt		 PMID:17314311 PMID:24534072 PMID:27621431 GO_REF:0000002 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:89,372,248...89,431,779
Ensembl chr 3:89,371,497...89,431,773 		JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 TAS RGD PMID:12435272 RGD:729541 NCBI chr 4:34,558,327...34,568,329
Ensembl chr 4:33,589,799...33,601,850 		JBrowse link
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bckdk branched chain ketoacid dehydrogenase kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:191,945,809...191,950,480
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:22195962)		 Ensembl
GO_Central
RGD		 PMID:22195962 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:77,113,464...77,144,145
Ensembl chr 3:56,705,871...56,733,038 		JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:22360721)		 UniProt
GO_Central
RGD		 PMID:22360721 GO_REF:0000024 GO_REF:0000033 NCBI chr10:80,469,388...80,483,988
Ensembl chr10:79,972,556...79,987,085 		JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:22865452) RGD PMID:22865452 NCBI chr  X:62,480,535...62,547,371
Ensembl chr  X:58,486,554...58,553,557 		JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISO
IBA
IEA
ISS		 (PMID:21852536)
GO_REF:0000033
(PMID:16606348)
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:16606348 PMID:21852536 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:34,558,327...34,568,329
Ensembl chr 4:33,589,799...33,601,850 		JBrowse link
G Tpk1 thiamin pyrophosphokinase 1 involved_in ISO
IEA		 (PMID:38547260)
GO_REF:0000107		 RGD
Ensembl		 PMID:38547260 GO_REF:0000107 NCBI chr 4:73,170,125...73,557,683
Ensembl chr 4:72,170,134...72,557,694 		JBrowse link
regulation of acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snca synuclein alpha acts_upstream_of_or_within ISO
IEA		 MGI:2389489 (PMID:16636270), (PMID:16734431)
GO_REF:0000107		 RGD
Ensembl		 PMID:16636270 PMID:16734431 GO_REF:0000107 NCBI chr 4:91,026,474...91,127,444
Ensembl chr 4:89,696,420...89,796,262 		JBrowse link
regulation of ceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000068509 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 Ensembl chr17:11,942,344...11,942,538 JBrowse link
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of
involved_in		 ISO
IEA		 MGI:1913862 (PMID:31880535)
GO_REF:0000117		 RGD
UniProt		 PMID:31880535 GO_REF:0000117 NCBI chr 9:48,243,365...48,253,316
Ensembl chr 9:48,237,572...48,253,211 		JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 involved_in IEA GO_REF:0000117
GO_REF:0000104		 UniProt GO_REF:0000104 GO_REF:0000117 NCBI chr 7:1,247,869...1,250,999
Ensembl chr 7:1,246,479...1,250,907 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of
involved_in		 ISO
IEA		 MGI:2137691|MGI:2181669|MGI:6382064 (PMID:31880535)
GO_REF:0000104
GO_REF:0000117		 RGD
UniProt		 PMID:31880535 GO_REF:0000104 GO_REF:0000117 NCBI chr10:83,590,052...83,596,035
Ensembl chr10:83,590,071...83,598,620 		JBrowse link
G Paqr4 progestin and adipoQ receptor family member 4 involved_in ISO
IEA		 (PMID:32291319), (PMID:38961186)
GO_REF:0000107		 RGD
Ensembl		 PMID:32291319 PMID:38961186 GO_REF:0000107 NCBI chr10:13,263,559...13,267,237
Ensembl chr10:12,758,972...12,762,584 		JBrowse link
G Prkcd protein kinase C, delta involved_in ISO
IEA
ISS		 (PMID:17303575)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17303575 GO_REF:0000024 GO_REF:0000107 NCBI chr16:5,775,681...5,806,122
Ensembl chr16:5,769,215...5,799,352 		JBrowse link
G Samd8 sterile alpha motif domain containing 8 involved_in ISO
IEA		 (PMID:19506037)
GO_REF:0000107		 RGD
Ensembl		 PMID:19506037 GO_REF:0000107 NCBI chr15:2,512,104...2,562,368
Ensembl chr15:2,512,105...2,515,379
Ensembl chr15:2,512,105...2,515,379 		JBrowse link
regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:1857061 (PMID:16037214) RGD PMID:16037214 NCBI chr 2:136,532,912...136,668,560
Ensembl chr 2:133,963,107...134,517,536 		JBrowse link
sphingomyelin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:23560799) RGD PMID:23560799 NCBI chr10:95,416,984...95,490,647
Ensembl chr10:94,917,520...94,990,988 		JBrowse link
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of ISO MGI:1913862 (PMID:31880535) RGD PMID:31880535 NCBI chr 9:48,243,365...48,253,316
Ensembl chr 9:48,237,572...48,253,211 		JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 acts_upstream_of ISO MGI:2137691|MGI:2181669|MGI:6382064 (PMID:31880535) RGD PMID:31880535 NCBI chr10:83,590,052...83,596,035
Ensembl chr10:83,590,071...83,598,620 		JBrowse link
G Osbp oxysterol binding protein involved_in ISO
IEA		 (PMID:12023275)
GO_REF:0000107		 RGD
Ensembl		 PMID:12023275 GO_REF:0000107 NCBI chr 1:218,313,455...218,343,263
Ensembl chr 1:208,887,895...208,918,506 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase acts_upstream_of_or_within ISO (PMID:25667419) RGD PMID:25667419 NCBI chr10:45,275,434...45,349,651
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in ISO
IEA
IBA
ISS		 (PMID:14685263), (PMID:14976195), (PMID:17982138)
GO_REF:0000107
(PMID:27892528)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
HGNC-UCL		 PMID:14685263 PMID:14976195 PMID:17982138 PMID:27892528 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:239,409,991...239,681,195
Ensembl chr 1:229,998,119...230,259,603 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:14685263), (PMID:17982138)
GO_REF:0000107
(PMID:27892528)
(PMID:25667419)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:14685263 PMID:17982138 PMID:25667419 PMID:27892528 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:219,889,809...219,967,704
Ensembl chr 2:219,893,572...219,967,546 		JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3815115 (PMID:16216550)
GO_REF:0000107
(PMID:26301690)		 RGD
Ensembl		 PMID:16216550 PMID:26301690 GO_REF:0000107 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 acts_upstream_of_or_within ISO
IEA		 MGI:3815117 (PMID:16216550)
GO_REF:0000107		 RGD
Ensembl		 PMID:16216550 GO_REF:0000107 NCBI chr 6:112,679,623...112,762,470
Ensembl chr 6:106,950,949...107,031,542 		JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:12023275) RGD PMID:12023275 NCBI chr 9:105,177,904...105,208,400
Ensembl chr 9:105,177,907...105,207,847 		JBrowse link
succinyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmaa metabolism of cobalamin associated A acts_upstream_of_or_within ISO (PMID:7904153) RGD PMID:7904153 NCBI chr19:28,619,060...28,649,319
Ensembl chr19:28,619,087...28,649,319 		JBrowse link
G Mmut methylmalonyl-CoA mutase involved_in ISO
IEA		 (PMID:7904153)
GO_REF:0000107		 RGD
Ensembl		 PMID:7904153 GO_REF:0000107 NCBI chr 9:27,425,935...27,454,202
Ensembl chr 9:19,928,727...19,957,046 		JBrowse link
urea cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agmat agmatinase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:159,326,680...159,357,300
Ensembl chr 5:154,060,151...154,074,276 		JBrowse link
G Arg1 arginase 1 involved_in IDA
IEA		 GO_REF:0000043
GO_REF:0000041		 UniProt
RGD		 PMID:4062872 GO_REF:0000041 GO_REF:0000043, RGD:2300098 NCBI chr 1:22,295,093...22,307,720
Ensembl chr 1:20,475,968...20,488,422 		JBrowse link
G Arg2 arginase 2 involved_in IEA GO_REF:0000041
GO_REF:0000043		 UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 6:103,669,001...103,694,375
Ensembl chr 6:97,936,002...97,961,378 		JBrowse link
G Asl argininosuccinate lyase involved_in NAS
IEA
IDA		 GO_REF:0000043
GO_REF:0000041		 UniProt
RGD		 PMID:2789519 PMID:4062872 GO_REF:0000041 GO_REF:0000043, RGD:632221, RGD:2300098 NCBI chr12:32,295,779...32,313,257
Ensembl chr12:26,659,565...26,679,662 		JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in IDA
IEA
IBA
IMP
ISO		 GO_REF:0000107
GO_REF:0000043
GO_REF:0000033
PMID:19491403
GO_REF:0000041
(PMID:18473344), (PMID:27287393), (PMID:7977368), (PMID:8792870)		 Ensembl
UniProt
GO_Central
RGD		 PMID:7977368 PMID:8792870 PMID:18473344 PMID:27287393 PMID:4062872 More... GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107, RGD:2300098, RGD:12859071 NCBI chr 3:35,144,765...35,194,632
Ensembl chr 3:14,747,368...14,796,903 		JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha acts_upstream_of_or_within ISO
IEA		 (PMID:17213233)
GO_REF:0000107		 RGD
Ensembl		 PMID:17213233 GO_REF:0000107 NCBI chr 1:96,896,584...96,899,256
Ensembl chr 1:87,759,433...87,762,412 		JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 involved_in IDA
IEA		 GO_REF:0000043 UniProt
RGD		 PMID:3680220 PMID:4062872 GO_REF:0000043, RGD:1582379, RGD:2300098 NCBI chr 9:76,063,863...76,186,739
Ensembl chr 9:68,614,153...68,737,033 		JBrowse link
G Fh fumarate hydratase acts_upstream_of
involved_in		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23643539)		 UniProt
Ensembl
RGD		 PMID:23643539 GO_REF:0000024 GO_REF:0000107 NCBI chr13:87,524,331...87,550,215
Ensembl chr13:87,524,337...87,550,266 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2177757 (PMID:17213233) RGD PMID:17213233 NCBI chr14:80,070,456...80,219,668
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Otc ornithine transcarbamylase involved_in IDA
IEA
ISO		 GO_REF:0000107
GO_REF:0000043
GO_REF:0000041
(PMID:2556444)		 Ensembl
UniProt
RGD		 PMID:2556444 PMID:3680220 PMID:4062872 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107, RGD:1582379, RGD:2300098 NCBI chr  X:15,126,358...15,202,473
Ensembl chr  X:12,453,834...12,566,918 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      metabolic process 12206
        amide metabolic process 495
          amide biosynthetic process 166
            L-asparagine biosynthetic process 1
            N-acetylneuraminate biosynthetic process 3
            achromobactin biosynthetic process 0
            acyl-CoA biosynthetic process + 40
            allantoin biosynthetic process 0
            bacitracin A biosynthetic process 0
            biotin biosynthetic process 0
            bradykinin biosynthetic process 1
            brevianamide F biosynthetic process 0
            carnosine biosynthetic process 1
            ceramide biosynthetic process + 79
            chrysobactin biosynthetic process 0
            coenzyme A biosynthetic process + 11
            depsipeptide biosynthetic process + 0
            dethiobiotin biosynthetic process 0
            fatty acid primary amide biosynthetic process 1
            ferrichrome biosynthetic process + 0
            folic acid biosynthetic process 0
            formamide biosynthetic process 0
            gliotoxin biosynthetic process + 0
            glutathione biosynthetic process + 15
            gramicidin S biosynthetic process 0
            indoleacetic acid amide conjugate biosynthetic process 0
            lactam biosynthetic process + 0
            leukotriene D4 biosynthetic process 2
            lincomycin biosynthetic process 0
            melatonin biosynthetic process 2
            novobiocin biosynthetic process 0
            ochratoxin A biosynthetic process 0
            pantothenate biosynthetic process 0
            peptide antibiotic biosynthetic process + 0
            phytochelatin biosynthetic process 0
            piperine biosynthetic process 0
            pyoverdine biosynthetic process 0
            pyrrolysine biosynthetic process 0
            rhizobactin 1021 biosynthetic process 0
            spermidine hydroxycinnamate conjugate biosynthetic process 0
            sphingomyelin biosynthetic process 10
            tensidol A biosynthetic process + 0
            tensidol B biosynthetic process + 0
            tryprostatin A biosynthetic process 0
            urea cycle 10
            ureide biosynthetic process 0
            vibriobactin biosynthetic process 0
            viridicatumtoxin biosynthetic process 0
paths to the root