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Gene: Agk (acylglycerol kinase) Rattus norvegicus

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Symbol:

Agk

Name:

acylglycerol kinase

RGD ID:

1562046

Description:

Predicted to enable acylglycerol kinase activity and lipid kinase activity. Predicted to be involved in ceramide biosynthetic process; protein insertion into mitochondrial inner membrane; and sphingosine biosynthetic process. Predicted to act upstream of or within lipid phosphorylation. Predicted to be located in mitochondrial inner membrane and mitochondrial intermembrane space. Predicted to be part of TIM22 mitochondrial import inner membrane insertion complex. Predicted to be active in membrane and mitochondrion. Human ortholog(s) of this gene implicated in Sengers syndrome and cataract 38. Orthologous to human AGK (acylglycerol kinase); PARTICIPATES IN glycerolipid metabolic pathway; INTERACTS WITH bisphenol A; flutamide; methimazole.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

acylglycerol kinase, mitochondrial; LOC502749; RGD1562046; similar to putative lipid kinase

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AGK (acylglycerol kinase)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Agk (acylglycerol kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Agk (acylglycerol kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AGK (acylglycerol kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AGK (acylglycerol kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Agk (acylglycerol kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	AGK (acylglycerol kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	AGK (acylglycerol kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Agk (acylglycerol kinase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ITFG1 (integrin alpha FG-GAP repeat containing 1)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	AGK (acylglycerol kinase)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Agk (acylglycerol kinase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	agk (acylglycerol kinase)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	F52C9.3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Drosophila melanogaster (fruit fly):	Mulk	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	agk	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	70,081,550 - 70,160,642 (+)	NCBI		GRCr8
mRatBN7.2	4	69,114,850 - 69,193,989 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	69,114,269 - 69,193,934 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	74,043,235 - 74,122,247 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	69,964,359 - 70,043,387 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	68,375,826 - 68,454,859 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	68,483,345 - 68,561,518 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	68,483,320 - 68,560,801 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	133,268,765 - 133,346,852 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	67,879,971 - 67,953,901 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	64,117,809 - 64,197,005 (+)	NCBI		Celera
Cytogenetic Map	4	q23	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Agk	Rat	cataract		ISO	AGK (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital cataract	ClinVar
Agk	Rat	cataract 38		ISO	AGK (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:17576681 more ...
Agk	Rat	genetic disease		ISO	AGK (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:22284826 more ...
Agk	Rat	RASopathy		ISO	AGK (Homo sapiens)	8554872	ClinVar Annotator: match by term: RASopathy	ClinVar	PMID:12414817 more ...
Agk	Rat	Sengers syndrome		ISO	AGK (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:15168109 more ...
Agk	Rat	trichohepatoenteric syndrome 1		ISO	AGK (Homo sapiens)	8554872	ClinVar Annotator: match by term: Trichohepatoenteric syndrome 1	ClinVar	PMID:22284826 more ...

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Agk	Rat	Sengers syndrome		ISO	AGK (Homo sapiens)	11554173	CTD Direct Evidence: marker/mechanism	CTD	PMID:23266196

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Agk	Rat	cataract 38		ISO	AGK (Homo sapiens)	7240710		OMIM
Agk	Rat	Sengers syndrome		ISO	AGK (Homo sapiens)	7240710		OMIM

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Agk	Rat	2,3,7,8-tetrachlorodibenzodioxine	multiple interactions	ISO	Agk (Mus musculus)	6480464	Tetrachlorodibenzodioxin promotes the reaction [AHR protein binds to AGK promoter]	CTD	PMID:19654925
Agk	Rat	4,4'-sulfonyldiphenol	increases expression	ISO	Agk (Mus musculus)	6480464	bisphenol S results in increased expression of AGK mRNA	CTD	PMID:31881267 and PMID:33297965
Agk	Rat	all-trans-retinoic acid	decreases expression	ISO	AGK (Homo sapiens)	6480464	Tretinoin results in decreased expression of AGK mRNA	CTD	PMID:33167477
Agk	Rat	antirheumatic drug	increases expression	ISO	AGK (Homo sapiens)	6480464	Antirheumatic Agents results in increased expression of AGK mRNA	CTD	PMID:24449571
Agk	Rat	arsane	affects methylation	ISO	AGK (Homo sapiens)	6480464	Arsenic affects the methylation of AGK gene	CTD	PMID:25304211
Agk	Rat	arsenic atom	affects methylation	ISO	AGK (Homo sapiens)	6480464	Arsenic affects the methylation of AGK gene	CTD	PMID:25304211
Agk	Rat	benzo[a]pyrene	affects methylation	ISO	AGK (Homo sapiens)	6480464	Benzo(a)pyrene affects the methylation of AGK intron and Benzo(a)pyrene affects the methylation of AGK promoter	CTD	PMID:27901495 and PMID:30157460
Agk	Rat	benzo[e]pyrene	increases methylation	ISO	AGK (Homo sapiens)	6480464	benzo(e)pyrene results in increased methylation of AGK intron	CTD	PMID:30157460
Agk	Rat	bisphenol A	affects expression	EXP		6480464	bisphenol A affects the expression of AGK mRNA	CTD	PMID:25181051
Agk	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of AGK mRNA	CTD	PMID:30816183
Agk	Rat	bortezomib	decreases expression	ISO	AGK (Homo sapiens)	6480464	Bortezomib results in decreased expression of AGK mRNA	CTD	PMID:20977926
Agk	Rat	cadmium dichloride	decreases expression	ISO	AGK (Homo sapiens)	6480464	Cadmium Chloride results in decreased expression of AGK mRNA	CTD	PMID:38568856
Agk	Rat	CGP 52608	multiple interactions	ISO	AGK (Homo sapiens)	6480464	CGP 52608 promotes the reaction [RORA protein binds to MULK gene]	CTD	PMID:28238834
Agk	Rat	chloroethene	increases expression	ISO	Agk (Mus musculus)	6480464	Vinyl Chloride results in increased expression of AGK mRNA	CTD	PMID:18579281
Agk	Rat	chlorpyrifos	decreases expression	ISO	Agk (Mus musculus)	6480464	Chlorpyrifos results in decreased expression of AGK mRNA	CTD	PMID:37019170
Agk	Rat	cobalt dichloride	decreases expression	ISO	AGK (Homo sapiens)	6480464	cobaltous chloride results in decreased expression of AGK mRNA	CTD	PMID:19376846
Agk	Rat	dibutyl phthalate	decreases expression	ISO	Agk (Mus musculus)	6480464	Dibutyl Phthalate results in decreased expression of AGK mRNA	CTD	PMID:17361019 and PMID:21266533
Agk	Rat	doxorubicin	decreases expression	ISO	AGK (Homo sapiens)	6480464	Doxorubicin results in decreased expression of AGK mRNA	CTD	PMID:29803840
Agk	Rat	ethanol	affects splicing	ISO	Agk (Mus musculus)	6480464	Ethanol affects the splicing of AGK mRNA	CTD	PMID:30319688
Agk	Rat	flutamide	increases expression	EXP		6480464	Flutamide results in increased expression of AGK mRNA	CTD	PMID:24136188
Agk	Rat	FR900359	increases phosphorylation	ISO	AGK (Homo sapiens)	6480464	FR900359 results in increased phosphorylation of AGK protein	CTD	PMID:37730182
Agk	Rat	fulvestrant	increases methylation	ISO	AGK (Homo sapiens)	6480464	Fulvestrant results in increased methylation of AGK gene	CTD	PMID:31601247
Agk	Rat	hydralazine	multiple interactions	ISO	AGK (Homo sapiens)	6480464	[Hydralazine co-treated with Valproic Acid] results in increased expression of AGK mRNA	CTD	PMID:17183730
Agk	Rat	ivermectin	decreases expression	ISO	AGK (Homo sapiens)	6480464	Ivermectin results in decreased expression of AGK protein	CTD	PMID:32959892
Agk	Rat	methapyrilene	increases methylation	ISO	AGK (Homo sapiens)	6480464	Methapyrilene results in increased methylation of AGK intron	CTD	PMID:30157460
Agk	Rat	methimazole	increases expression	EXP		6480464	Methimazole results in increased expression of AGK mRNA	CTD	PMID:38685447
Agk	Rat	paracetamol	increases expression	ISO	AGK (Homo sapiens)	6480464	Acetaminophen results in increased expression of AGK mRNA	CTD	PMID:25704631
Agk	Rat	perfluorooctanoic acid	increases expression	ISO	AGK (Homo sapiens)	6480464	perfluorooctanoic acid results in increased expression of AGK protein	CTD	PMID:26879310
Agk	Rat	phenobarbital	affects expression	ISO	Agk (Mus musculus)	6480464	Phenobarbital affects the expression of AGK mRNA	CTD	PMID:23091169
Agk	Rat	resveratrol	multiple interactions	ISO	AGK (Homo sapiens)	6480464	[Plant Extracts co-treated with Resveratrol] results in increased expression of AGK mRNA	CTD	PMID:23557933
Agk	Rat	SB 431542	multiple interactions	ISO	AGK (Homo sapiens)	6480464	[LDN 193189 co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide co-treated with FGF2 protein] results in increased expression of AGK protein	CTD	PMID:37664457
Agk	Rat	tert-butyl hydroperoxide	decreases expression	ISO	AGK (Homo sapiens)	6480464	tert-Butylhydroperoxide results in decreased expression of AGK mRNA	CTD	PMID:15336504
Agk	Rat	testosterone	decreases expression	ISO	AGK (Homo sapiens)	6480464	Testosterone results in decreased expression of AGK mRNA	CTD	PMID:33359661
Agk	Rat	thiram	decreases expression	ISO	AGK (Homo sapiens)	6480464	Thiram results in decreased expression of AGK mRNA	CTD	PMID:38568856
Agk	Rat	triphenyl phosphate	affects expression	ISO	AGK (Homo sapiens)	6480464	triphenyl phosphate affects the expression of AGK mRNA	CTD	PMID:37042841
Agk	Rat	triptonide	increases expression	ISO	Agk (Mus musculus)	6480464	triptonide results in increased expression of AGK mRNA	CTD	PMID:33045310
Agk	Rat	tungsten	increases expression	ISO	Agk (Mus musculus)	6480464	Tungsten results in increased expression of AGK mRNA	CTD	PMID:30912803
Agk	Rat	tunicamycin	decreases expression	ISO	Agk (Mus musculus)	6480464	Tunicamycin results in decreased expression of AGK mRNA	CTD	PMID:17127020
Agk	Rat	valproic acid	multiple interactions	ISO	AGK (Homo sapiens)	6480464	[Hydralazine co-treated with Valproic Acid] results in increased expression of AGK mRNA	CTD	PMID:17183730
Agk	Rat	valproic acid	affects expression	ISO	Agk (Mus musculus)	6480464	Valproic Acid affects the expression of AGK mRNA	CTD	PMID:17963808
Agk	Rat	valproic acid	decreases methylation	ISO	AGK (Homo sapiens)	6480464	Valproic Acid results in decreased methylation of AGK gene	CTD	PMID:29154799
Agk	Rat	valproic acid	decreases expression	ISO	AGK (Homo sapiens)	6480464	Valproic Acid results in decreased expression of AGK mRNA	CTD	PMID:29501571

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Agk	Rat	ceramide biosynthetic process	acts_upstream_of_or_within	IEA	UniProtKB:Q9ESW4 and ensembl:ENSMUSP00000031977	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	ceramide biosynthetic process	acts_upstream_of_or_within	ISO	Agk (Mus musculus)	1624291	PMID:15252046	RGD	PMID:15252046
Agk	Rat	ceramide biosynthetic process	involved_in	IBA	MGI:1917173 and PANTHER:PTN000961571	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Agk	Rat	glycerolipid metabolic process	involved_in	IEA	UniPathway:UPA00230	1600115	GO_REF:0000041	UniProt	GO_REF:0000041
Agk	Rat	lipid metabolic process	involved_in	IEA	UniProtKB-KW:KW-0443	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Agk	Rat	lipid phosphorylation	acts_upstream_of_or_within	ISO	Agk (Mus musculus)	1624291	PMID:15252046	RGD	PMID:15252046
Agk	Rat	lipid phosphorylation	acts_upstream_of_or_within	IEA	UniProtKB:Q9ESW4 and ensembl:ENSMUSP00000031977	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	protein insertion into mitochondrial inner membrane	involved_in	ISO	AGK (Homo sapiens)	1624291	PMID:28712724 more ...	RGD	PMID:28712724 more ...
Agk	Rat	protein insertion into mitochondrial inner membrane	involved_in	IEA	UniProtKB:Q53H12 and ensembl:ENSP00000497280	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	sphingosine biosynthetic process	involved_in	IBA	PANTHER:PTN000270644 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Agk	Rat	cytoplasm	is_active_in	IBA	FB:FBgn0030300 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Agk	Rat	membrane	located_in	ISO	Agk (Mus musculus)	1624291	PMID:15252046 and PMID:20080761	RGD	PMID:15252046 and PMID:20080761
Agk	Rat	membrane	is_active_in	IBA	FB:FBgn0030300 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Agk	Rat	membrane	located_in	IEA	UniProtKB:Q9ESW4 and ensembl:ENSMUSP00000031977	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	mitochondrial inner membrane	located_in	IEA	UniProtKB-SubCell:SL-0168	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Agk	Rat	mitochondrial inner membrane	located_in	IEA	UniProtKB-KW:KW-0999	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Agk	Rat	mitochondrial inner membrane	located_in	ISO	AGK (Homo sapiens)	1624291	PMID:28712724 more ...	RGD	PMID:28712724 more ...
Agk	Rat	mitochondrial inner membrane	located_in	IEA	UniProtKB:Q53H12 and ensembl:ENSP00000497280	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	mitochondrial intermembrane space	located_in	ISO	AGK (Homo sapiens)	1624291	PMID:28712724 and PMID:28712726	RGD	PMID:28712724 and PMID:28712726
Agk	Rat	mitochondrial intermembrane space	located_in	IEA	UniProtKB:Q53H12 and ensembl:ENSP00000497280	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	mitochondrial intermembrane space	located_in	IEA	UniProtKB-SubCell:SL-0169	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Agk	Rat	mitochondrial membrane	located_in	ISO	AGK (Homo sapiens)	1624291	PMID:15939762 and PMID:16269826	RGD	PMID:15939762 and PMID:16269826
Agk	Rat	mitochondrial membrane	located_in	IEA	UniProtKB:Q53H12 and ensembl:ENSP00000497280	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	mitochondrion	located_in	ISO	AGK (Homo sapiens) and UniProtKB:Q53H12-1	1624291		RGD	GO_REF:0000052
Agk	Rat	mitochondrion	located_in	IEA	UniProtKB:Q53H12 and ensembl:ENSP00000497280	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	mitochondrion	located_in	IEA	UniProtKB-KW:KW-0496	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Agk	Rat	mitochondrion	is_active_in	IBA	PANTHER:PTN000961571 and UniProtKB:Q53H12	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Agk	Rat	mitochondrion	located_in	IEA	UniProtKB:A4D1U5 and ensembl:ENSP00000497280	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	TIM22 mitochondrial import inner membrane insertion complex	part_of	ISO	AGK (Homo sapiens)	1624291	PMID:28712724 more ...	RGD	PMID:28712724 more ...
Agk	Rat	TIM22 mitochondrial import inner membrane insertion complex	part_of	IEA	UniProtKB:Q53H12 and ensembl:ENSP00000497280	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Agk	Rat	acylglycerol kinase activity	enables	ISO	Agk (Mus musculus)	1624291	PMID:15252046	RGD	PMID:15252046
Agk	Rat	acylglycerol kinase activity	enables	IEA	UniProtKB:Q9ESW4 and ensembl:ENSMUSP00000031977	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	acylglycerol kinase activity	enables	IBA	MGI:1917173 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Agk	Rat	acylglycerol kinase activity	enables	IEA	UniProtKB:Q53H12 and ensembl:ENSP00000497280	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	acylglycerol kinase activity	enables	ISO	AGK (Homo sapiens)	1624291	PMID:15939762	RGD	PMID:15939762
Agk	Rat	ATP-dependent diacylglycerol kinase activity	enables	ISO	AGK (Homo sapiens)	1624291	PMID:15939762	RGD	PMID:15939762
Agk	Rat	ATP-dependent diacylglycerol kinase activity	enables	IEA	UniProtKB:Q9ESW4 and ensembl:ENSMUSP00000031977	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	ATP-dependent diacylglycerol kinase activity	enables	ISO	Agk (Mus musculus)	1624291	PMID:15252046 and PMID:18004883	RGD	PMID:15252046 and PMID:18004883
Agk	Rat	ATP-dependent diacylglycerol kinase activity	enables	IEA	UniProtKB:Q53H12 and ensembl:ENSP00000497280	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	ATP-dependent diacylglycerol kinase activity	enables	IBA	MGI:1917173 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Agk	Rat	ceramide kinase activity	enables	ISO	Agk (Mus musculus)	1624291	PMID:15252046	RGD	PMID:15252046
Agk	Rat	ceramide kinase activity	enables	IEA	UniProtKB:Q9ESW4 and ensembl:ENSMUSP00000031977	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	ceramide kinase activity	enables	IBA	FB:FBgn0260750 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Agk	Rat	D-erythro-sphingosine kinase activity	enables	IBA	FB:FBgn0030300 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Agk	Rat	kinase activity	enables	IEA	InterPro:IPR001206	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Agk	Rat	kinase activity	enables	IEA	UniProtKB-KW:KW-0418	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Agk	Rat	lipid kinase activity	enables	ISO	Agk (Mus musculus)	1624291	PMID:15252046	RGD	PMID:15252046
Agk	Rat	lipid kinase activity	enables	IEA	ARBA:ARBA00034964	1600115	GO_REF:0000117	UniProt	GO_REF:0000117
Agk	Rat	lipid kinase activity	enables	IEA	UniProtKB:Q9ESW4 and ensembl:ENSMUSP00000031977	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Agk	Rat	phosphotransferase activity, alcohol group as acceptor	enables	IEA	ARBA:ARBA00026265	1600115	GO_REF:0000117	UniProt	GO_REF:0000117
Agk	Rat	protein binding	enables	ISO	AGK (Homo sapiens)	1624291	UniProtKB:A0A096LP01 more ...	RGD	PMID:28514442 more ...
Agk	Rat	protein binding	enables	ISO	AGK (Homo sapiens) and UniProtKB:Q53H12-2	1624291	UniProtKB:P42858 and PMID:32814053	RGD	PMID:32814053

Imported Annotations - KEGG (archival)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Agk	Rat	glycerolipid metabolic pathway		IEA		6907045		KEGG	rno:00561

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
3.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:15252046	PMID:15939762	PMID:16269826	PMID:18004883	PMID:18614015	PMID:20080761	PMID:22864860	PMID:28712724	PMID:28712726

Agk
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	70,081,550 - 70,160,642 (+)	NCBI		GRCr8
mRatBN7.2	4	69,114,850 - 69,193,989 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	69,114,269 - 69,193,934 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	74,043,235 - 74,122,247 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	69,964,359 - 70,043,387 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	68,375,826 - 68,454,859 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	68,483,345 - 68,561,518 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	68,483,320 - 68,560,801 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	133,268,765 - 133,346,852 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	67,879,971 - 67,953,901 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	64,117,809 - 64,197,005 (+)	NCBI		Celera
Cytogenetic Map	4	q23	NCBI

AGK
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	141,551,410 - 141,655,244 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	141,551,278 - 141,655,244 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	141,251,210 - 141,355,044 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	140,897,693 - 141,000,678 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	140,708,436 - 140,807,393	NCBI
Celera	7	135,972,707 - 136,075,841 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI
HuRef	7	135,547,396 - 135,651,593 (+)	NCBI		HuRef
CHM1_1	7	141,185,395 - 141,288,517 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	142,867,231 - 142,971,096 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	140,588,796 - 140,691,918 (+)	NCBI

Agk
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	40,302,010 - 40,378,723 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	40,302,106 - 40,373,696 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	40,325,076 - 40,397,570 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	40,325,172 - 40,396,762 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	40,275,477 - 40,346,761 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	40,255,102 - 40,326,369 (+)	NCBI		MGSCv36	mm8
Celera	6	40,312,815 - 40,384,101 (+)	NCBI		Celera
Cytogenetic Map	6	B1	NCBI
cM Map	6	18.82	NCBI

Agk
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955494	1,924,026 - 2,021,778 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955494	1,924,026 - 2,041,914 (-)	NCBI	ChiLan1.0	ChiLan1.0

AGK
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	178,335,028 - 178,437,621 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	30,305,896 - 30,448,003 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	133,438,436 - 133,580,423 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	145,909,004 - 146,050,512 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	145,948,154 - 146,050,512 (+)	Ensembl	panpan1.1		panPan2

AGK
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	7,561,084 - 7,637,017 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	7,561,305 - 7,637,015 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	8,399,526 - 8,481,863 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	7,477,653 - 7,558,396 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	7,480,649 - 7,558,315 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	7,430,884 - 7,511,475 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	7,273,226 - 7,353,908 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	7,341,468 - 7,422,416 (-)	NCBI		UU_Cfam_GSD_1.0

Agk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	13,689,358 - 13,766,517 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936592	5,457,582 - 5,531,000 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936592	5,454,860 - 5,531,285 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AGK
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	8,263,896 - 8,368,972 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	8,263,761 - 8,369,060 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	8,555,273 - 8,579,653 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AGK
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	110,302,439 - 110,404,733 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	110,337,966 - 110,403,436 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666072	6,981,319 - 7,083,033 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Agk
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624765	21,572,714 - 21,668,516 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624765	21,572,797 - 21,666,424 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Agk
340 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	680
Count of miRNA genes:	271
Interacting mature miRNAs:	344
Transcripts:	ENSRNOT00000015744
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1358352	Srcrt3	Stress Responsive Cort QTL 3	2.29		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	38465774	146803430	Rat
1549843	Bw53	Body weight QTL 53		0.0001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	61697658	103194791	Rat
61445	Strs3	Sensitivity to stroke QTL 3	3		cerebrum integrity trait (VT:0010549)	post-insult time to onset of cerebrovascular lesion (CMO:0002343)	4	40433388	85433388	Rat
6893678	Bw108	Body weight QTL 108	2.6	0.006	body mass (VT:0001259)	body weight (CMO:0000012)	4	43457976	88457976	Rat
10755501	Bp390	Blood pressure QTL 390	2.5		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	4	26775591	168368347	Rat
1358363	Sradr3	Stress Responsive Adrenal Weight QTL 3	6.19		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	4	57486946	102486946	Rat
61336	Bp21	Blood pressure QTL 21	4.6		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	57114705	78881294	Rat
1549839	Bw52	Body weight QTL 52		0.0001	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	61697658	115089733	Rat
6909128	Pancm4	Pancreatic morphology QTL 4	11.35		pancreas mass (VT:0010144)	pancreas wet weight (CMO:0000626)	4	26907285	75585128	Rat
61475	Aia2	Adjuvant induced arthritis QTL 2	5.8		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	39505275	73892441	Rat
8694439	Bw168	Body weight QTL 168	9.57	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	4	40433414	85433414	Rat
8655906	Rf60	Renal function QTL 60	3.8		blood creatinine amount (VT:0005328)	creatinine clearance (CMO:0000765)	4	29494195	81006281	Rat
2317577	Eae24	Experimental allergic encephalomyelitis QTL 24			nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	4	66993185	72752834	Rat
6909122	Insul22	Insulin level QTL 22	4.63		blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	4	26907285	75585128	Rat
1354660	Salc1	Saline consumption QTL 1	11.26		drinking behavior trait (VT:0001422)	saline drink intake rate (CMO:0001627)	4	44463908	148090542	Rat
2300179	Bmd50	Bone mineral density QTL 50	5.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	4	60928534	105928534	Rat
1298082	Stresp4	Stress response QTL 4			blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	4	50119848	146803430	Rat
70192	BpQTLcluster5	Blood pressure QTL cluster 5	4.183		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	4	62933508	114921294	Rat
1300139	Hrtrt6	Heart rate QTL 6	2.85		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	4	39524264	116179656	Rat
70200	Alc18	Alcohol consumption QTL 18	9.2		drinking behavior trait (VT:0001422)	ethanol intake volume to total fluid intake volume ratio (CMO:0001591)	4	56647873	149491524	Rat
1578657	Bss12	Bone structure and strength QTL 12	8.9		femur morphology trait (VT:0000559)	femoral neck cross-sectional area (CMO:0001697)	4	60220938	105220938	Rat
1578658	Bss13	Bone structure and strength QTL 13	8		femur strength trait (VT:0010010)	femoral neck polar moment of inertia (CMO:0001670)	4	60220938	105220938	Rat
4889969	Bss96	Bone structure and strength QTL 96	4.9		tibia size trait (VT:0100001)	tibia cortical bone volume (CMO:0001725)	4	56647776	78882945	Rat
2316958	Gluco58	Glucose level QTL 58	10		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	11320076	180699135	Rat
4889972	Bss97	Bone structure and strength QTL 97	5.6		tibia size trait (VT:0100001)	tibia total bone volume (CMO:0001724)	4	56647776	78882945	Rat
6478684	Anxrr30	Anxiety related response QTL 30		0.00087	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	62753847	107753847	Rat
5685012	Bmd87	Bone mineral density QTL 87	5.1		tibia mineral mass (VT:1000283)	bone mineral content (CMO:0001554)	4	56647776	78882945	Rat
5685009	Bmd86	Bone mineral density QTL 86	3.7		tibia mineral mass (VT:1000283)	bone mineral density (CMO:0001226)	4	56647776	78882945	Rat
1331807	Rf31	Renal function QTL 31	2.988		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	4	39524264	74726312	Rat
8552782	Vie1	Viral induced encephalitis QTL 1	26.4		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	4	34430484	82490359	Rat
634311	Sach7	Saccharin preference QTL 7			taste sensitivity trait (VT:0001986)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	57114432	81266970	Rat
2306547	Iddm38	Insulin dependent diabetes mellitus QTL 38			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	4	67386669	70362197	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	0.000016	consumption behavior trait (VT:0002069)	saccharin intake volume to total fluid intake volume ratio (CMO:0001601)	4	59948935	154902892	Rat
631261	Tcas3	Tongue tumor susceptibility QTL 3	6.88		tongue integrity trait (VT:0010553)	number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)	4	10814170	91360527	Rat
2312567	Glom19	Glomerulus QTL 19	1.9	0.006	kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	4	45456990	146803430	Rat
6478772	Anxrr49	Anxiety related response QTL 49		0.15488	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	62753847	107753847	Rat
2312569	Pur19	Proteinuria QTL 19	3.4	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	4	65882107	96130297	Rat
8655961	Kidm43	Kidney mass QTL 43	18		kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	4	36303261	103194984	Rat
1354612	Foco1	Food consumption QTL 1	8.87		eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	4	44463908	148090542	Rat
2303168	Bp330	Blood pressure QTL 330	4.25	0.017	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	4	5214602	146446691	Rat
8552801	Bw143	Body weight QTL 143	7.3		body mass (VT:0001259)	change in body weight to body weight ratio (CMO:0002216)	4	34430484	82490359	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	0.00003	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	59948935	154902892	Rat
8552807	Vie4	Viral induced encephalitis QTL 4	7.3		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	4	62933508	82490359	Rat
619616	Bp79	Blood pressure QTL 79		0.0292	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	5214602	78882945	Rat
1576305	Emca6	Estrogen-induced mammary cancer QTL 6	5.8		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	4	44463720	155883716	Rat
61418	Pia5	Pristane induced arthritis QTL 5	4.5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	4	62277855	128289560	Rat
631651	Bp124	Blood pressure QTL 124	3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	62879517	107879517	Rat
8552809	Vie5	Viral induced encephalitis QTL 5	25.3		brain integrity trait (VT:0010579)	encephalitis incidence/prevalence measurement (CMO:0002361)	4	34430484	82490359	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	0.00015	consumption behavior trait (VT:0002069)	ethanol drink intake rate to body weight ratio (CMO:0001616)	4	59948935	154902892	Rat
1558651	Swd3	Spike wave discharge measurement QTL 3	4.62	0.000024	brain electrophysiology trait (VT:0010557)	brain spike-and-wave discharge frequency (CMO:0001742)	4	58432133	92991462	Rat
1641833	Alc21	Alcohol consumption QTL 21	8.6	0.0001	drinking behavior trait (VT:0001422)	ethanol drink intake rate (CMO:0001407)	4	56698790	126192555	Rat
631546	Bp86	Blood pressure QTL 86	3.2		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	4	57114432	91360801	Rat
631674	Iddm14	Insulin dependent diabetes mellitus QTL 14			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	64528739	157573521	Rat
6478743	Anxrr40	Anxiety related response QTL 40		0.83076	defecation behavior trait (VT:0010462)	defecation rate (CMO:0000998)	4	62753847	107753847	Rat
7394826	Bw126	Body weight QTL 126		0.002	body mass (VT:0001259)	body weight gain (CMO:0000420)	4	62933269	87483707	Rat
12798520	Anxrr55	Anxiety related response QTL 55	4.45	0.01	locomotor behavior trait (VT:0001392)	number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)	4	32583980	114627242	Rat
631671	Iddm11	Insulin dependent diabetes mellitus QTL 11	3.6	0.0012	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	4	58635877	78886137	Rat

RH131222

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	4	69,193,673 - 69,193,853 (+)	MAPPER	mRatBN7.2
Rnor_6.0	4	68,561,258 - 68,561,437	NCBI	Rnor6.0
Rnor_5.0	4	133,346,537 - 133,346,716	UniSTS	Rnor5.0
RGSC_v3.4	4	67,953,648 - 67,953,827	UniSTS	RGSC3.4
Celera	4	64,196,752 - 64,196,931	UniSTS
RH 3.4 Map	4	405.11	UniSTS
Cytogenetic Map	4	q22	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001127497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006236363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762821	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017592846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108239	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039108241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000015744 ⟹ ENSRNOP00000015744

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	69,114,269 - 69,193,934 (+)	Ensembl
Rnor_6.0 Ensembl	4	68,483,320 - 68,560,801 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094589 ⟹ ENSRNOP00000093172

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	4	69,114,269 - 69,193,934 (+)	Ensembl

RefSeq Acc Id:

NM_001127497 ⟹ NP_001120969

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	70,081,657 - 70,160,635 (+)	NCBI
mRatBN7.2	4	69,114,952 - 69,193,927 (+)	NCBI
Rnor_6.0	4	68,483,638 - 68,561,511 (+)	NCBI
Rnor_5.0	4	133,268,765 - 133,346,852 (+)	NCBI
RGSC_v3.4	4	67,879,971 - 67,953,901 (+)	RGD
Celera	4	64,117,809 - 64,197,005 (+)	RGD

Sequence:

show sequence

TTTTTGTGAGAGCACACAGGAAAGGCCGGACGCTGAGCGGCGGGCAGCGGAGAAGATGACCACATTCTTTAAAACACTTCGAAATCATTGGAAGAAAACTACAGCTGGCCTCTGCTTGCTGACATGGG
GAGGTCACTGGCTCTATGGAAAGCACTGTGATAACCTGCTAAGAAGAGCAGCTTGTCAAGAAGCTCAGGTGTTTGGCAACCAGCTCATTCCTCCCAATGCACAAGTGAAGAAAGCCACCGTCTTTCTC
AATCCTGCAGCTTGCAAAGGCAAAGCCAGAACTCTATTTGAAAAAAATGCTGCCCCAATTTTACACCTGTCTGGCATGGATGTGACTGTCGTCAAGACAGATTATGAGGGACAAGCCAAGAAGCTCTT
GGAGTTGATGGAAACGACCGATGTGATCATTGTTGCTGGAGGAGATGGCACCCTGCAGGAGGTTGTTACTGGAGTACTTAGAAGAACAGATGAGGCTACCTTCAGTAAGATTCCAATTGGATTTATCC
CGCTGGGACAGACCAGTAGTTTGAGTCACACCCTCTTTGCTGAAAGTGGAAACAAAGTCCAACATGTCACAGATGCCGCACTGGCCATTGTGAAAGGGGAGACTGTTCCACTTGACGTCTTGCAGATC
AAGGGTGAAAAAGAACAGCCTGTCTATGCCATGACCGGCCTCCGGTGGGGATCCTTCAGAGATGCTGGCGTCAAAGTTAGCAAGTACTGGTATCTTGGTCCTCTAAAAACCAAAGCAGCCCACTTTTT
CAGCACTCTTCAGGAGTGGCCTCAGACCCATCAGGCCTCCATCTCTTACACGGGCCCTACAGAGAGACCTCCCATTGGGCCTGAAGATGCTGCTCCCCGGCCTTCTCTGTACAGGAGAATATTACGTA
GGCTTGCCTCATTCTGGGCACAGCCACAGGATGCCTTCTCCCCAGAGGTGAGCCCTGAGGTCTGGAAAGATGTACAACTGTCCACCATTGAACTGTCCATCACAACCCGAAACACCCAACTTGACCTG
ACGAGCAAAGAGGACTTTATGAACATTTGCATTGAGCCTGACACTGTCAGCAAAGGAGATTTCATAATCATAGGCAGTAAGAAGGTGAGAGACCCTGGTCTGCGAGCAGCCGGCACCGAGTGTCTCCA
CGCCAGCCGCTGCACTCTGTCTCTTCCTGAGGGAACTGAGGGCTCCTTCAGCATCGACAGCGAGGAGTATGAAGCCATGCCTGTGGAGGTCAAACTCCTGCCCAGAAAACTTCAGTTCTTCTGTGATC
CAAGGAAGAGAGAGCAAATGCTGCAGAGCACATCCCAGTGAGCCTCAGCCTTGCGGGGGCGTTCCTAGGCTGCCCTGCGGCAGCACTGCGGGGCGTTCCCAGGCTGCTCTTCAAGCCACCAGTGGGAC
CATAAGGGAATGTGTGTGCTTCTGGCCCAGTGTCACAGGATCCCAAAGGAATTTTCATGGCAAGTACCCCCAACCCGTTTGCTTCCTAGAGCACATACCCTGTCACCCAACCTGTGGTCAGTACTCTG
TTAACCCCTGCTTTCCTTACGTTGAGGCAGTTGACCCCTCCTACACAGTGGTTGTCTCAGGCTGCTTCAAGGACATTCTTGCCCTCACTGAGTTGGAAAGGGCTGGAGTTTTGTGATTGCCCCACAGT
GGAGAGTAGAATCTGTAGACTAAGCTCCTGTTTCAGTTCTCAGACCGTCCTGGGGCCTCCGGGGAAGCAGCTGCTGTCTCTGGGTGTCTCTCCCTCTTTCTGGGCTCTCTCATGGGTGCTGCTCTTTT
GTGAGCTCTCTGCCTTGGTTGGTTGGTCTCATCTGGAAAGCAAATGTGAGGTTGTTCCCTCTTCAGCCTTGGCAAACGTATTGTAAAACGCCATTTAAAAACAAACTAGTGCTTCCTCATTGTTTGTG
TGCATGTGTACAACTGAGGCTCATGTTGAAAACTAACTGACCTGGGGCCCACCCCCCAAACTTTGTACCTCAACCTGGCAGGAGGCCAGCGTTGCTCATTTTAAAAGACTGCTTCCCAGGTGAATCAA
CCATACCGGGAGAAAGTGTTTTAAATCTACTTCATAAACTTATATGTATTATATATATATTTTTAAAAATCACGTTTGTGTTGACGTCTGTTGTTTCCATGAGAGGTTAAACACTTATCAGTGTGCTT
ACTAGTGTTGTGTAAATATTGTTTAAGAATAAAAGACTTTCATCATTCTTTT

hide sequence

RefSeq Acc Id:

XM_008762821 ⟹ XP_008761043

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	70,084,335 - 70,160,642 (+)	NCBI
mRatBN7.2	4	69,117,630 - 69,193,989 (+)	NCBI
Rnor_6.0	4	68,485,895 - 68,561,518 (+)	NCBI

Sequence:

show sequence

GAGACTTTGTGTGGTTCTTAGTTCAGGTTGCTGTAATTGGAGTGGCTTAAATAACAAAAAATTA
TTTCTCACAGCCTGCAAACTGGAAGTATGAACCCAAGATGGTTGGCACAGAGTATTGTGCACTCTTCCTAGTTTGCAAATGGCTATTTCATTGCTGTGTCTGCTGATGGAGCTGGATGCTGGTGTCTC
TTCTCAGAGGGGTGCTAATCCCATTCATGAGGACAATATCCTTCCGACCCCATTACTTTTACATCCTAATACCATTTCAGTAGGAATTAGGGCAGTCACTTTCAAGTTTTGGAAACAGTTGTTGAGGC
CATAGCATATACCTAACTCCTTTACGCTGTGACTTCTCCTAATCTGCAGGATTCTGAGAATTCCCTGACTCTCTCTGGCTCCTTCAGGTCCATCCCAGTTAGGCCCATTTTTCTGGACTCAAGGAGAA
GATGACCACATTCTTTAAAACACTTCGAAATCATTGGAAGAAAACTACAGCTGGCCTCTGCTTGCTGACATGGGGAGGTCACTGGCTCTATGGAAAGCACTGTGATAACCTGCTAAGAAGAGCAGCTT
GTCAAGAAGCTCAGGTGTTTGGCAACCAGCTCATTCCTCCCAATGCACAAGTGAAGAAAGCCACCGTCTTTCTCAATCCTGCAGCTTGCAAAGGCAAAGCCAGAACTCTATTTGAAAAAAATGCTGCC
CCAATTTTACACCTGTCTGGCATGGATGTGACTGTCGTCAAGACAGATTATGAGGGACAAGCCAAGAAGCTCTTGGAGTTGATGGAAACGACCGATGTGATCATTGTTGCTGGAGGAGATGGCACCCT
GCAGGAGGTTGTTACTGGAGTACTTAGAAGAACAGATGAGGCTACCTTCAGTAAGATTCCAATTGGATTTATCCCGCTGGGACAGACCAGTAGTTTGAGTCACACCCTCTTTGCTGAAAGTGGAAACA
AAGTCCAACATGTCACAGATGCCGCACTGGCCATTGTGAAAGGGGAGACTGTTCCACTTGACGTCTTGCAGATCAAGGGTGAAAAAGAACAGCCTGTCTATGCCATGACCGGCCTCCGGTGGGGATCC
TTCAGAGATGCTGGCGTCAAAGTTAGCAAGTACTGGTATCTTGGTCCTCTAAAAACCAAAGCAGCCCACTTTTTCAGCACTCTTCAGGAGTGGCCTCAGACCCATCAGGCCTCCATCTCTTACACGGG
CCCTACAGAGAGACCTCCCATTGGGCCTGAAGATGCTGCTCCCCGGCCTTCTCTGTACAGGAGAATATTACGTAGGCTTGCCTCATTCTGGGCACAGCCACAGGATGCCTTCTCCCCAGAGGTGAGCC
CTGAGGTCTGGAAAGATGTACAACTGTCCACCATTGAACTGTCCATCACAACCCGAAACACCCAACTTGACCTGACGAGCAAAGAGGACTTTATGAACATTTGCATTGAGCCTGACACTGTCAGCAAA
GGAGATTTCATAATCATAGGCAGTAAGAAGGTGAGAGACCCTGGTCTGCGAGCAGCCGGCACCGAGTGTCTCCACGCCAGCCGCTGCACTCTGTCTCTTCCTGAGGGAACTGAGGGCTCCTTCAGCAT
CGACAGCGAGGAGTATGAAGCCATGCCTGTGGAGGTCAAACTCCTGCCCAGAAAACTTCAGTTCTTCTGTGATCCAAGGAAGAGAGAGCAAATGCTGCAGAGCACATCCCAGTGAGCCTCAGCCTTGC
GGGGGCGTTCCTAGGCTGCCCTGCGGCAGCACTGCGGGGCGTTCCCAGGCTGCTCTTCAAGCCACCAGTGGGACCATAAGGGAATGTGTGTGCTTCTGGCCCAGTGTCACAGGATCCCAAAGGAATTT
TCATGGCAAGTACCCCCAACCCGTTTGCTTCCTAGAGCACATACCCTGTCACCCAACCTGTGGTCAGTACTCTGTTAACCCCTGCTTTCCTTACGTTGAGGCAGTTGACCCCTCCTACACAGTGGTTG
TCTCAGGCTGCTTCAAGGACATTCTTGCCCTCACTGAGTTGGAAAGGGCTGGAGTTTTGTGATTGCCCCACAGTGGAGAGTAGAATCTGTAGACTAAGCTCCTGTTTCAGTTCTCAGACCGTCCTGGG
GCCTCCGGGGAAGCAGCTGCTGTCTCTGGGTGTCTCTCCCTCTTTCTGGGCTCTCTCATGGGTGCTGCTCTTTTGTGAGCTCTCTGCCTTGGTTGGTTGGTCTCATCTGGAAAGCAAATGTGAGGTTG
TTCCCTCTTCAGCCTTGGCAAACGTATTGTAAAACGCCATTTAAAAACAAACTAGTGCTTCCTCATTGTTTGTGTGCATGTGTACAACTGAGGCTCATGTTGAAAACTAACTGACCTGGGGCCCACCC
CCCAAACTTTGTACCTCAACCTGGCAGGAGGCCAGCGTTGCTCATTTTAAAAGACTGCTTCCCAGGTGAATCAACCATACCGGGAGAAAGTGTTTTAAATCTACTTCATAAACTTATATGTATTATAT
ATATATTTTTAAAAATCACGTTTGTGTTGACGTCTGTTGTTTCCATGAGAGGTTAAACACTTATCAGTGTGCTTACTAGTGTTGTGTAAATATTGTTTAAGAATAAAAGACTTTCATCATTCTTTTAA
ACAGA

hide sequence

RefSeq Acc Id:

XM_017592845 ⟹ XP_017448334

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	70,081,713 - 70,160,642 (+)	NCBI
mRatBN7.2	4	69,115,023 - 69,193,989 (+)	NCBI
Rnor_6.0	4	68,483,703 - 68,561,518 (+)	NCBI

Sequence:

show sequence

GAGCGAGGGCCGCTGGCTGTGTGTGGTCAGGGTATGGGGCGCAGCCGTGGGTTGCTACGCTGAG
CAGGGCCGGAACCCGCCAGCGGTCCCGGGATCGGCCACGCGGTTGTTGACCGCAGCGCGGCGGGAGGAGGAAAGATTGGGCCGGGCCGGCGTGGCGCGCACGCCCGTGGTCCCTGTGAGTCAGGAGAA
GATGACCACATTCTTTAAAACACTTCGAAATCATTGGAAGAAAACTACAGCTGGCCTCTGCTTGCTGACATGGGGAGGTCACTGGCTCTATGGAAAGCACTGTGATAACCTGCTAAGAAGAGCAGCTT
GTCAAGAAGCTCAGGTGTTTGGCAACCAGCTCATTCCTCCCAATGCACAAGTGAAGAAAGCCACCGTCTTTCTCAATCCTGCAGCTTGCAAAGGCAAAGCCAGAACTCTATTTGAAAAAAATGCTGCC
CCAATTTTACACCTGTCTGGCATGGATGTGACTGTCGTCAAGACAGATTATGAGGGACAAGCCAAGAAGCTCTTGGAGTTGATGGAAACGACCGATGTGATCATTGTTGCTGGAGGAGATGGCACCCT
GCAGGAGGTTGTTACTGGAGTACTTAGAAGAACAGATGAGGCTACCTTCAGTAAGATTCCAATTGGATTTATCCCGCTGGGACAGACCAGTAGTTTGAGTCACACCCTCTTTGCTGAAAGTGGAAACA
AAGTCCAACATGTCACAGATGCCGCACTGGCCATTGTGAAAGGGGAGACTGTTCCACTTGACGTCTTGCAGATCAAGGGTGAAAAAGAACAGCCTGTCTATGCCATGACCGGCCTCCGGTGGGGATCC
TTCAGAGATGCTGGCGTCAAAGTTAGCAAGTACTGGTATCTTGGTCCTCTAAAAACCAAAGCAGCCCACTTTTTCAGCACTCTTCAGGAGTGGCCTCAGACCCATCAGGCCTCCATCTCTTACACGGG
CCCTACAGAGAGACCTCCCATTGGGCCTGAAGATGCTGCTCCCCGGCCTTCTCTGTACAGGAGAATATTACGTAGGCTTGCCTCATTCTGGGCACAGCCACAGGATGCCTTCTCCCCAGAGGTGAGCC
CTGAGGTCTGGAAAGATGTACAACTGTCCACCATTGAACTGTCCATCACAACCCGAAACACCCAACTTGACCTGACGAGCAAAGAGGACTTTATGAACATTTGCATTGAGCCTGACACTGTCAGCAAA
GGAGATTTCATAATCATAGGCAGTAAGAAGGTGAGAGACCCTGGTCTGCGAGCAGCCGGCACCGAGTGTCTCCACGCCAGCCGCTGCACTCTGTCTCTTCCTGAGGGAACTGAGGGCTCCTTCAGCAT
CGACAGCGAGGAGTATGAAGCCATGCCTGTGGAGGTCAAACTCCTGCCCAGAAAACTTCAGTTCTTCTGTGATCCAAGGAAGAGAGAGCAAATGCTGCAGAGCACATCCCAGTGAGCCTCAGCCTTGC
GGGGGCGTTCCTAGGCTGCCCTGCGGCAGCACTGCGGGGCGTTCCCAGGCTGCTCTTCAAGCCACCAGTGGGACCATAAGGGAATGTGTGTGCTTCTGGCCCAGTGTCACAGGATCCCAAAGGAATTT
TCATGGCAAGTACCCCCAACCCGTTTGCTTCCTAGAGCACATACCCTGTCACCCAACCTGTGGTCAGTACTCTGTTAACCCCTGCTTTCCTTACGTTGAGGCAGTTGACCCCTCCTACACAGTGGTTG
TCTCAGGCTGCTTCAAGGACATTCTTGCCCTCACTGAGTTGGAAAGGGCTGGAGTTTTGTGATTGCCCCACAGTGGAGAGTAGAATCTGTAGACTAAGCTCCTGTTTCAGTTCTCAGACCGTCCTGGG
GCCTCCGGGGAAGCAGCTGCTGTCTCTGGGTGTCTCTCCCTCTTTCTGGGCTCTCTCATGGGTGCTGCTCTTTTGTGAGCTCTCTGCCTTGGTTGGTTGGTCTCATCTGGAAAGCAAATGTGAGGTTG
TTCCCTCTTCAGCCTTGGCAAACGTATTGTAAAACGCCATTTAAAAACAAACTAGTGCTTCCTCATTGTTTGTGTGCATGTGTACAACTGAGGCTCATGTTGAAAACTAACTGACCTGGGGCCCACCC
CCCAAACTTTGTACCTCAACCTGGCAGGAGGCCAGCGTTGCTCATTTTAAAAGACTGCTTCCCAGGTGAATCAACCATACCGGGAGAAAGTGTTTTAAATCTACTTCATAAACTTATATGTATTATAT
ATATATTTTTAAAAATCACGTTTGTGTTGACGTCTGTTGTTTCCATGAGAGGTTAAACACTTATCAGTGTGCTTACTAGTGTTGTGTAAATATTGTTTAAGAATAAAAGACTTTCATCATTCTTTTAA
ACAGA

hide sequence

RefSeq Acc Id:

XM_017592846 ⟹ XP_017448335

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	70,081,567 - 70,160,642 (+)	NCBI
mRatBN7.2	4	69,114,869 - 69,193,989 (+)	NCBI
Rnor_6.0	4	68,483,586 - 68,561,518 (+)	NCBI

Sequence:

show sequence

CGCGTCGGAACCCGAGGGCAGCGGGAGCGGTTTCCTTTAAAAGAGAGGGAGATTTTTGTGAGAG
CACACAGGAAAGGCCGGACGCTGAGCGGCGGGCAGCGGAGAAGATGACCACATTCTTTAAAACACTTCGAAATCATTGGAAGAAAACTACAGCTGGCCTCTGCTTGCTGACATGGGGAGGTCACTGGC
TCTATGGAAAGCACTGGTGTTTGGCAACCAGCTCATTCCTCCCAATGCACAAGTGAAGAAAGCCACCGTCTTTCTCAATCCTGCAGCTTGCAAAGGCAAAGCCAGAACTCTATTTGAAAAAAATGCTG
CCCCAATTTTACACCTGTCTGGCATGGATGTGACTGTCGTCAAGACAGATTATGAGGGACAAGCCAAGAAGCTCTTGGAGTTGATGGAAACGACCGATGTGATCATTGTTGCTGGAGGAGATGGCACC
CTGCAGGAGGTTGTTACTGGAGTACTTAGAAGAACAGATGAGGCTACCTTCAGTAAGATTCCAATTGGATTTATCCCGCTGGGACAGACCAGTAGTTTGAGTCACACCCTCTTTGCTGAAAGTGGAAA
CAAAGTCCAACATGTCACAGATGCCGCACTGGCCATTGTGAAAGGGGAGACTGTTCCACTTGACGTCTTGCAGATCAAGGGTGAAAAAGAACAGCCTGTCTATGCCATGACCGGCCTCCGGTGGGGAT
CCTTCAGAGATGCTGGCGTCAAAGTTAGCAAGTACTGGTATCTTGGTCCTCTAAAAACCAAAGCAGCCCACTTTTTCAGCACTCTTCAGGAGTGGCCTCAGACCCATCAGGCCTCCATCTCTTACACG
GGCCCTACAGAGAGACCTCCCATTGGGCCTGAAGATGCTGCTCCCCGGCCTTCTCTGTACAGGAGAATATTACGTAGGCTTGCCTCATTCTGGGCACAGCCACAGGATGCCTTCTCCCCAGAGGTGAG
CCCTGAGGTCTGGAAAGATGTACAACTGTCCACCATTGAACTGTCCATCACAACCCGAAACACCCAACTTGACCTGACGAGCAAAGAGGACTTTATGAACATTTGCATTGAGCCTGACACTGTCAGCA
AAGGAGATTTCATAATCATAGGCAGTAAGAAGGTGAGAGACCCTGGTCTGCGAGCAGCCGGCACCGAGTGTCTCCACGCCAGCCGCTGCACTCTGTCTCTTCCTGAGGGAACTGAGGGCTCCTTCAGC
ATCGACAGCGAGGAGTATGAAGCCATGCCTGTGGAGGTCAAACTCCTGCCCAGAAAACTTCAGTTCTTCTGTGATCCAAGGAAGAGAGAGCAAATGCTGCAGAGCACATCCCAGTGAGCCTCAGCCTT
GCGGGGGCGTTCCTAGGCTGCCCTGCGGCAGCACTGCGGGGCGTTCCCAGGCTGCTCTTCAAGCCACCAGTGGGACCATAAGGGAATGTGTGTGCTTCTGGCCCAGTGTCACAGGATCCCAAAGGAAT
TTTCATGGCAAGTACCCCCAACCCGTTTGCTTCCTAGAGCACATACCCTGTCACCCAACCTGTGGTCAGTACTCTGTTAACCCCTGCTTTCCTTACGTTGAGGCAGTTGACCCCTCCTACACAGTGGT
TGTCTCAGGCTGCTTCAAGGACATTCTTGCCCTCACTGAGTTGGAAAGGGCTGGAGTTTTGTGATTGCCCCACAGTGGAGAGTAGAATCTGTAGACTAAGCTCCTGTTTCAGTTCTCAGACCGTCCTG
GGGCCTCCGGGGAAGCAGCTGCTGTCTCTGGGTGTCTCTCCCTCTTTCTGGGCTCTCTCATGGGTGCTGCTCTTTTGTGAGCTCTCTGCCTTGGTTGGTTGGTCTCATCTGGAAAGCAAATGTGAGGT
TGTTCCCTCTTCAGCCTTGGCAAACGTATTGTAAAACGCCATTTAAAAACAAACTAGTGCTTCCTCATTGTTTGTGTGCATGTGTACAACTGAGGCTCATGTTGAAAACTAACTGACCTGGGGCCCAC
CCCCCAAACTTTGTACCTCAACCTGGCAGGAGGCCAGCGTTGCTCATTTTAAAAGACTGCTTCCCAGGTGAATCAACCATACCGGGAGAAAGTGTTTTAAATCTACTTCATAAACTTATATGTATTAT
ATATATATTTTTAAAAATCACGTTTGTGTTGACGTCTGTTGTTTCCATGAGAGGTTAAACACTTATCAGTGTGCTTACTAGTGTTGTGTAAATATTGTTTAAGAATAAAAGACTTTCATCATTCTTTT
AAACAGA

hide sequence

RefSeq Acc Id:

XM_039108239 ⟹ XP_038964167

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	70,081,550 - 70,156,667 (+)	NCBI
mRatBN7.2	4	69,114,850 - 69,189,959 (+)	NCBI

RefSeq Acc Id:

XM_039108240 ⟹ XP_038964168

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	70,081,745 - 70,160,642 (+)	NCBI
mRatBN7.2	4	69,115,021 - 69,193,989 (+)	NCBI

RefSeq Acc Id:

XM_039108241 ⟹ XP_038964169

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	4	70,084,338 - 70,160,642 (+)	NCBI
mRatBN7.2	4	69,117,631 - 69,193,989 (+)	NCBI


Protein RefSeqs	NP_001120969	(Get FASTA)	NCBI Sequence Viewer
	XP_008761043	(Get FASTA)	NCBI Sequence Viewer
	XP_017448334	(Get FASTA)	NCBI Sequence Viewer
	XP_017448335	(Get FASTA)	NCBI Sequence Viewer
	XP_038964167	(Get FASTA)	NCBI Sequence Viewer
	XP_038964168	(Get FASTA)	NCBI Sequence Viewer
	XP_038964169	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM15403	(Get FASTA)	NCBI Sequence Viewer
	EDM15404	(Get FASTA)	NCBI Sequence Viewer
	EDM15405	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000015744.6
	ENSRNOP00000093172.1
	ENSRNOP00000107145
	ENSRNOP00000108388
	ENSRNOP00000111857

RefSeq Acc Id:

NP_001120969 ⟸ NM_001127497

- UniProtKB:

A6IEW6 (UniProtKB/TrEMBL), D3Z9L0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTTFFKTLRNHWKKTTAGLCLLTWGGHWLYGKHCDNLLRRAACQEAQVFGNQLIPPNAQVKKATVFLNPAACKGKARTLFEKNAAPILHLSGMDVTVVKTDYEGQAKKLLELMETTDVIIVAGGDGTL
QEVVTGVLRRTDEATFSKIPIGFIPLGQTSSLSHTLFAESGNKVQHVTDAALAIVKGETVPLDVLQIKGEKEQPVYAMTGLRWGSFRDAGVKVSKYWYLGPLKTKAAHFFSTLQEWPQTHQASISYTG
PTERPPIGPEDAAPRPSLYRRILRRLASFWAQPQDAFSPEVSPEVWKDVQLSTIELSITTRNTQLDLTSKEDFMNICIEPDTVSKGDFIIIGSKKVRDPGLRAAGTECLHASRCTLSLPEGTEGSFSI
DSEEYEAMPVEVKLLPRKLQFFCDPRKREQMLQSTSQ

hide sequence

RefSeq Acc Id:	XP_008761043 ⟸ XM_008762821
- Peptide Label:	isoform X1
- UniProtKB:	A6IEW6 (UniProtKB/TrEMBL), D3Z9L0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTFFKTLRNHWKKTTAGLCLLTWGGHWLYGKHCDNLLRRAACQEAQVFGNQLIPPNAQVKKAT VFLNPAACKGKARTLFEKNAAPILHLSGMDVTVVKTDYEGQAKKLLELMETTDVIIVAGGDGTLQEVVTGVLRRTDEATFSKIPIGFIPLGQTSSLSHTLFAESGNKVQHVTDAALAIVKGETVPLDV LQIKGEKEQPVYAMTGLRWGSFRDAGVKVSKYWYLGPLKTKAAHFFSTLQEWPQTHQASISYTGPTERPPIGPEDAAPRPSLYRRILRRLASFWAQPQDAFSPEVSPEVWKDVQLSTIELSITTRNTQ LDLTSKEDFMNICIEPDTVSKGDFIIIGSKKVRDPGLRAAGTECLHASRCTLSLPEGTEGSFSIDSEEYEAMPVEVKLLPRKLQFFCDPRKREQMLQSTSQ hide sequence

RefSeq Acc Id:

XP_017448335 ⟸ XM_017592846

- Peptide Label:

isoform X3

- Sequence:

show sequence

MGRSLALWKALVFGNQLIPPNAQVKKATVFLNPAACKGKARTLFEKNAAPILHLSGMDVTVVKTDYEGQAKKLLELMETTDVIIVAGGDGTLQEVVTGVLRRTDEATFSKIPIGFIPLGQTSSLSHTL
FAESGNKVQHVTDAALAIVKGETVPLDVLQIKGEKEQPVYAMTGLRWGSFRDAGVKVSKYWYLGPLKTKAAHFFSTLQEWPQTHQASISYTGPTERPPIGPEDAAPRPSLYRRILRRLASFWAQPQDA
FSPEVSPEVWKDVQLSTIELSITTRNTQLDLTSKEDFMNICIEPDTVSKGDFIIIGSKKVRDPGLRAAGTECLHASRCTLSLPEGTEGSFSIDSEEYEAMPVEVKLLPRKLQFFCDPRKREQMLQSTS
Q

hide sequence

RefSeq Acc Id:	XP_017448334 ⟸ XM_017592845
- Peptide Label:	isoform X1
- UniProtKB:	A6IEW6 (UniProtKB/TrEMBL), D3Z9L0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTFFKTLRNHWKKTTAGLCLLTWGGHWLYGKHCDNLLRRAACQEAQVFGNQLIPPNAQVKKAT VFLNPAACKGKARTLFEKNAAPILHLSGMDVTVVKTDYEGQAKKLLELMETTDVIIVAGGDGTLQEVVTGVLRRTDEATFSKIPIGFIPLGQTSSLSHTLFAESGNKVQHVTDAALAIVKGETVPLDV LQIKGEKEQPVYAMTGLRWGSFRDAGVKVSKYWYLGPLKTKAAHFFSTLQEWPQTHQASISYTGPTERPPIGPEDAAPRPSLYRRILRRLASFWAQPQDAFSPEVSPEVWKDVQLSTIELSITTRNTQ LDLTSKEDFMNICIEPDTVSKGDFIIIGSKKVRDPGLRAAGTECLHASRCTLSLPEGTEGSFSIDSEEYEAMPVEVKLLPRKLQFFCDPRKREQMLQSTSQ hide sequence

Ensembl Acc Id:

ENSRNOP00000015744 ⟸ ENSRNOT00000015744

Protein Domains

DAGKc

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3Z9L0-F1-model_v2	AlphaFold	D3Z9L0	1-490	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-45167	BioCyc
Ensembl Genes	ENSRNOG00000011509	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000015744.8	UniProtKB/TrEMBL
	ENSRNOT00000094589.1	UniProtKB/TrEMBL
	ENSRNOT00000122767	ENTREZGENE
	ENSRNOT00000134748	ENTREZGENE
	ENSRNOT00000137915	ENTREZGENE
Gene3D-CATH	Probable inorganic polyphosphate/atp-NAD kinase, domain 1	UniProtKB/TrEMBL
InterPro	AGK_C	UniProtKB/TrEMBL
	ATP-NAD_kinase_dom_1	UniProtKB/TrEMBL
	ATP-NAD_kinase_PpnK-typ	UniProtKB/TrEMBL
	Diacylglycerol_kinase_cat_dom	UniProtKB/TrEMBL
	Lipid_Phosphate_FormReg	UniProtKB/TrEMBL
KEGG Report	rno:502749	UniProtKB/TrEMBL
NCBI Gene	502749	ENTREZGENE
PANTHER	ACYLGLYCEROL KINASE, MITOCHONDRIAL	UniProtKB/TrEMBL
	SPHINGOSINE KINASE	UniProtKB/TrEMBL
Pfam	AGK_C	UniProtKB/TrEMBL
	DAGK_cat	UniProtKB/TrEMBL
PhenoGen	Agk	PhenoGen
PROSITE	DAGK	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000011509	RatGTEx
SMART	DAGKc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF111331	UniProtKB/TrEMBL
UniProt	A0A8I6AGX0_RAT	UniProtKB/TrEMBL
	A6IEW6	ENTREZGENE, UniProtKB/TrEMBL
	D3Z9L0	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-02-29	Agk	acylglycerol kinase	RGD1562046_predicted	similar to putative lipid kinase (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1562046_predicted	similar to putative lipid kinase (predicted)	LOC502749	similar to putative lipid kinase	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC502749	similar to putative lipid kinase			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)