Eae24 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL: Eae24 (Experimental allergic encephalomyelitis QTL 24) Rattus norvegicus

Symbol: Eae24
Name: Experimental allergic encephalomyelitis QTL 24
RGD ID: 2317577
Trait: nervous system integrity trait   (VT:0010566)    
Measurement Type: experimental autoimmune encephalomyelitis duration   (CMO:0001424)    
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0465,987,814 - 73,372,824RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0465,802,990 - 138,066,698RGDRnor5.0
RGSC_v3.4465,821,936 - 71,729,738RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: DA/ZtmKini PVG.1AV1/Kini 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
69274Casp2caspase 247165235871670228Rat
69335Trpv6transient receptor potential cation channel, subfamily V, member 647091863170934291Rat
3760Ssbp1single stranded DNA binding protein 146863484468645112Rat
708437Prss3bprotease, serine, 3B46926462869268336Rat
727853Tas2r126taste receptor, type 2, member 12647183667771837603Rat
620718Arhgef5Rho guanine nucleotide exchange factor 547271077572736415Rat
2360Clcn1chloride voltage-gated channel 147167421871704318Rat
3826Tbxas1thromboxane A synthase 146662418166846745Rat
628694Zc3hav1zinc finger CCCH-type containing, antiviral 146601211166062160Rat
620698Zyxzyxin47174018871749386Rat
3418Prss2protease, serine, 247068973770694816Rat
1304680Epha1Eph receptor A147174910071763681Rat
3417Prss1serine protease 147077604670779249Rat
1303251Mkrn1makorin ring finger protein 146718516767206478Rat
620636Trpv5transient receptor potential cation channel, subfamily V, member 547094761570974004Rat
708585LOC286960preprotrypsinogen IV46920792769211671Rat
70946Pipprolactin induced protein47132085971325153Rat
1303054Prss58serine protease 5846914543569152111Rat
1302947Tryx5trypsin X546915626969164906Rat
735188Gstk1glutathione S-transferase kappa 147162177771626096Rat
620867Sval1seminal vesicle antigen-like 147137653571383953Rat
620869Sval2seminal vesicle antigen-like 247134067471344638Rat
619908BrafB-Raf proto-oncogene, serine/threonine kinase46738933167520549Rat
620122Chl1cell adhesion molecule L1-like47026941470331313Rat
1333950Olr808olfactory receptor 80847227280972273765Rat
1308628Parp12poly (ADP-ribose) polymerase family, member 1246683564766900324Rat
1333504Olr809olfactory receptor 80947238856872389503Rat
1333381Olr804olfactory receptor 80447195564071969446Rat
1359400Try10trypsin 1047065574970659252Rat
1359405Fam115efamily with sequence similarity 115, member E47201058372023952Rat
1333098Olr816olfactory receptor 81647256679072567722Rat
1333188Olr802olfactory receptor 80247188071171881652Rat
1310722Ubn2ubinuclein 246616463966254297Rat
1333772Olr814-psolfactory receptor pseudogene 81447252316772524103Rat
1310346Slc37a3solute carrier family 37, member 346711891867162821Rat
1333327Olr815-psolfactory receptor pseudogene 81547253061772530957Rat
1308368Mgammaltase-glucoamylase46901859269114027Rat
1332594Olr806olfactory receptor 80647222155072222503Rat
1333367Olr811olfactory receptor 81147242812872429063Rat
1308651Luc7l2LUC7-like 2 pre-mRNA splicing factor46629031966357970Rat
1311446Prss3serine protease 347061452470617998Rat
1332872Olr819olfactory receptor 81947263703572637976Rat
1306163Ephb6Eph receptor B647090325370918514Rat
1309217Mrps33mitochondrial ribosomal protein S3346760697167616056Rat
1333975Olr810olfactory receptor 81047240351472404446Rat
1308130Ndufb2NADH:ubiquinone oxidoreductase subunit B246737818867385267Rat
1309349Hipk2homeodomain interacting protein kinase 246643839066625183Rat
1309236Zc3hav1lzinc finger CCCH-type containing, antiviral 1 like46598882066003450Rat
1333433Olr798-psolfactory receptor pseudogene 79846837576068376701Rat
1332716Olr813olfactory receptor 81347250293572503876Rat
1306142Dennd2aDENN domain containing 2A46724225767342993Rat
1563848LOC312273Trypsin V-A46919048569196430Rat
1560283Try5trypsin 547062519670628470Rat
1561363Ttc26tetratricopeptide repeat domain 2646609017866147998Rat
1560653Fam131bfamily with sequence similarity 131, member B47170387271713268Rat
1563986Dennd11DENN domain containing 1146856930868597626Rat
1562314Tas2r144taste receptor, type 2, member 14447158897471589933Rat
1562066RGD1562066similar to odorant receptor ORZ647107955571080499Rat
1563929NoboxNOBOX oogenesis homeobox47274923972757066Rat
1333811Olr803olfactory receptor 80347189236871893306Rat
1332737Olr799olfactory receptor 79946880466168805605Rat
1311823Prss37serine protease 3746833749868349286Rat
1560649Tas2r138taste receptor, type 2, member 13846883122168832216Rat
1334194Olr801olfactory receptor 80147186933271870273Rat
1311058Adck2aarF domain containing kinase 246735953167373390Rat
1559476Fmc1formation of mitochondrial complex V assembly factor 146627683566284868Rat
1562046Agkacylglycerol kinase46848334568561518Rat
1560602Tas2r137taste receptor, type 2, member 13746864829668654695Rat
1334415Olr812olfactory receptor 81247248054072481472Rat
1564286Moxd2monooxygenase, DBH-like 246911747769125972Rat
1561194Tas2r108taste receptor, type 2, member 10846865692868657842Rat
1334159Olr821olfactory receptor 82147267054372671505Rat
1334371Olr805-psolfactory receptor pseudogene 80547219489072195101Rat
1334209Olr818olfactory receptor 81847260324272604174Rat
1333011Olr820olfactory receptor 82047265612572657087Rat
1333677Olr807olfactory receptor 80747223994272240892Rat
1587195Olr437olfactory receptor 43747258956572590494Rat
1587495Klrg2killer cell lectin like receptor G246637067466381351Rat
1565470KelKell metallo-endopeptidase (Kell blood group)47097950470996920Rat
1565474Tcaf1TRPM8 channel-associated factor 147211934972171733Rat
1584755Clec5aC-type lectin domain containing 5A46881033068819921Rat
1587197Wee2WEE2 oocyte meiosis inhibiting kinase46860477068631341Rat
1583670LOC679818similar to Maltase-glucoamylase, intestinal46842454468458991Rat
1561078Tas2r135taste receptor, type 2, member 13547179576871796733Rat
1565263Rab19RAB19, member RAS oncogene family46716641267176141Rat
1565373Clec2lC-type lectin domain family 2, member L46640488066421656Rat
1585938Tmem178btransmembrane protein 178B46766926668059249Rat
1583604Chmp4bl1chromatin modifying protein 4B-like 146705993967060988Rat
1597830LOC683849similar to Anionic trypsin II precursor (Pretrypsinogen II)47075578070759478Rat
1591767LOC680433hypothetical protein LOC68043347208843372094117Rat
1595436Tas2r139taste receptor, type 2, member 13947151269571513654Rat
1589408Tpk1thiamin pyrophosphokinase 147279225273174179Rat
1595510Llcfc1LLLL and CFNLAS motif containing 147097747670978855Rat
1594187Tmem139transmembrane protein 13947164870571651861Rat
1591778Tcaf2cTRPM8 channel associated factor 2C47204587072074759Rat
1592650Kdm7alysine demethylase 7A46691560366957971Rat
1598148LOC679922similar to protease, serine, 347072912170732183Rat
1626026Vom2r-ps15vomeronasal 2 receptor, pseudogene 1546817031168171122Rat
2317994LOC100365995rCG28262-like47055144770563005Rat
2321500LOC100360758peroxiredoxin-1-like47164497471646078Rat
2323279LOC100359864hypothetical LOC10035986447115780971158694Rat
2323329LOC100359812hypothetical LOC10035981247101188971012279Rat
2324469LOC100362586ribosomal protein L23-like46626137366261867Rat
6487302Tcaf2TRPM8 channel-associated factor 247117797471196286Rat
6492017LOC10091159460S ribosomal protein L4-like47016374970166277Rat
6493361LOC100911317uncharacterized LOC10091131746944412669444900Rat
6495158LOC100911007T-cell receptor beta chain T17T-22-like46938408369388704Rat
6487032LOC100912449protein FAM115C-like47124137071263038Rat
6493911LOC100911271uncharacterized LOC10091127146943552169437265Rat
6494965LOC100911086T-cell receptor beta chain T17T-22-like46938322369392373Rat
6496223LOC100910843polymerase delta-interacting protein 2-like46924907069251340Rat
6503507LOC100909424uncharacterized LOC10090942446633590466337704Rat
7517929LOC102548553uncharacterized LOC10254855347270621972709048Rat
7650176LOC102549986uncharacterized LOC10254998646916949769178241Rat
7666339LOC102555403ferritin heavy chain-like46744251567443283Rat
7594577LOC102551824killer cell lectin-like receptor 4-like47001076270026493Rat
7626918LOC102554668uncharacterized LOC10255466846737687367378101Rat
7643066LOC102554568serine/arginine-rich splicing factor 3-like46735346267353906Rat
7618053LOC102554637anionic trypsin-2-like47074396570747241Rat
7618420LOC102554766uncharacterized LOC10255476646752162467522568Rat
7574135LOC102555151uncharacterized LOC10255515146794749767963203Rat
7552981LOC102551982prolactin-inducible protein homolog47139000071489915Rat
9140300LOC103690198taste receptor type 2 member 14347179036371793845Rat
9076846LOC103690255olfactory receptor-like protein OLF347229226172293196Rat
9152467LOC103692116uncharacterized LOC10369211647083359170839751Rat
9194012LOC103692118uncharacterized LOC10369211847099928571049422Rat
9116769LOC103692103uncharacterized LOC10369210346764925367662394Rat
9267734LOC103692117uncharacterized LOC10369211747097516670977497Rat
9307225LOC103692101uncharacterized LOC10369210146654723066551668Rat
9314430LOC103690291olfactory receptor-like protein OLF347230781872308808Rat
9320161LOC103692107small nuclear ribonucleoprotein E pseudogene46633250666334771Rat
9383372LOC103692105uncharacterized LOC10369210546944418369452280Rat
9383753LOC103692119uncharacterized LOC10369211947205207672053640Rat
9369725LOC103690059maltase-glucoamylase, intestinal-like46884901468996940Rat
9463902LOC103692113uncharacterized LOC10369211346715271967164367Rat
9472607LOC103689990protein FAM115C-like47127473971287256Rat
9395576LOC103692138olfactory receptor 6B147233248172333425Rat
9413023LOC103692102uncharacterized LOC10369210246712925067129792Rat
11372626LOC108350699uncharacterized LOC10835069947093237370940358Rat
11448653LOC108350693high mobility group protein B1 pseudogene46609091766092259Rat
11447015LOC108348337uncharacterized LOC10834833747299746672998956Rat
11370861LOC108350694insulin-induced gene 1 protein pseudogene46633500966339637Rat
11451624Trnar-ccu2transfer RNA arginine (anticodon CCU) 246627617966276251Rat
11383946LOC108350697uncharacterized LOC10835069746857843268581763Rat
11419404LOC108350809glyceraldehyde-3-phosphate dehydrogenase pseudogene47263838872639423Rat
11422917LOC10835069660S ribosomal protein L26-like46740536567406401Rat
11408653LOC108350698uncharacterized LOC10835069847012613970252711Rat
11481974LOC108350700uncharacterized LOC10835070047289768672912046Rat
11498065LOC10835080840S ribosomal protein S23 pseudogene47220713272207648Rat
11484912LOC10835080760S ribosomal protein L30-like46976375869766686Rat
11491226LOC108350695small nuclear ribonucleoprotein Sm D1 pseudogene46636578266366228Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11171D4Hri215547077350970773663Ratregion
11172D4Wox2419447077349970773683Ratregion
11173D4Arb829647077347170773766Ratregion
11174D4Mgh3238147069022770690630Ratregion
11176D4Wox2320047069389070694058Ratregion
11177D4Arb937047069106270691431Ratregion
11342D4Got4318446864502068645203Ratregion
11401D4Arb1218447082250570822688Ratregion
33682D7Mit1820046693905766939242Ratregion
36181D4Rat2616047077347570773654Ratregion
37012D4Rat2512746598781465987930Ratregion
37026D4Rat2712447319780573197921Ratregion
37026D4Rat2712447311361873113734Ratregion
34845D4Rat1913347224394272244072Ratregion
40734D4Rat16114946641117266411310Ratregion
38966D4Rat9320046766330067663504Ratregion
39266D4Rat10224646639400066394255Ratregion
42170D4Arb3416546862914368629316Ratregion
42174D4Arb3612047069388970694058Ratregion
42178D4Arb3812047077350670773683Ratregion
41124D4Rat16220546909072669090937Ratregion
41616D4Rat19315746963171469631874Ratregion
43806D4Got4714846766710467667251Ratregion
43808D4Got4925046668224766682496Ratregion
43809D4Got5212047213210272132221Ratregion
43810D4Got5120647174455871744763Ratregion
60806D4Wox714647337269473372824Ratregion
60440D4Got4517246674734766747518Ratregion
60446D4Got5824647190255771902802Ratregion
60406D4Got10114146985295269853092Ratregion
62480D4Uia217846837941268379589Ratregion
1627601D4Got20820746722316267223367Ratregion
1635138D4Got23212147012453670124656Ratregion
1635866D4Got20719147268943272689617Ratregion
1633811D4Got24622046752847467528693Ratregion
7206028Olfr44952447242830972428832Ratregion
7206028Olfr44952447233267172333194Ratregion
5038644BB2834669946805889268058990Ratregion
5038776RH12732618446715109667151279Ratregion
5039036RH12747618247167003471670215Ratregion
5036749AU04908118546656238666562570Ratregion
5033909RH14057718546650286566503049Ratregion
7206214Insig118646633608766336251Ratregion
5034037RH14111919147174892571749115Ratregion
5034271RH14200818247170390371704084Ratregion
5034293RH14209621346623235066232562Ratregion
5026830RH13369521146601223466012444Ratregion
5029563BE09550915146630452366304675Ratregion
5035350BQ20563415046602923966029388Ratregion
5033007RH13726018246738949967389680Ratregion
5025014AU02331911146863052068630630Ratregion
5030429BF39757421346635154066351752Ratregion
5033231RH13806719646856479968564994Ratregion
5028454AI4474699946738979067389888Ratregion
5054895RH14348629946601326766013565Ratregion
5051763RH9464410947170269171702799Ratregion
5053793RH14285413346738683767386969Ratregion
5055345RH14374814947033059670330744Ratregion
5055921RH14407910746783793367838040Ratregion
5058840BF38714218346805722368057405Ratregion
5058356AI13694218846718818967188376Ratregion
5057834BF38624017346644242066442592Ratregion
5040756RH12846520847097956470979771Ratregion
5043780RH13022321546601223266012446Ratregion
5045516RH13122218046856125868561437Ratregion
5041352RH12880816246625410966254270Ratregion
5041506RH12889621546635406466354275Ratregion
5045160RH13101818146684607766846680Ratregion
5047662RH13245620246606233166062533Ratregion
5046656RH13187918146737318767373367Ratregion
5048120RH13272019446635882066359013Ratregion
5049772RH13367320147132454271325033Ratregion
5047294RH13224518046859843768598616Ratregion
5042594RH12952919746715173467151930Ratregion
5039804RH12791619347145552071455712Ratregion
5040044RH12805719646633454766334742Ratregion
5042746RH12962120247091830270918503Ratregion
5041582RH12894015847162592771626084Ratregion
5076450RH13918222346642143166421653Ratregion
5080626RH14168821646606676466066979Ratregion
5076108RH13898414846718565967185806Ratregion
5079392RH14096920447165143971651642Ratregion
5078958RH14065019147212985572130045Ratregion
5078962RH14065321947098843970988657Ratregion
5074020RH13777313146734112967341258Ratregion
5071230RH13496320046926465169264850Ratregion
5073290RH13735119046623898566239174Ratregion
5073638RH13755222247211951572119736Ratregion
5072372RH13681112746724249367242619Ratregion
5068676AU04700114247279751272797653Ratregion
5070358AI8417968446856490968564992Ratregion
5070360AV27746613647170415271704287Ratregion
5060404BI29217515046910975369109902Ratregion
5062484BF39797912046768046267680581Ratregion
5082471BF41606213046698157366981830Ratregion
5086475BE10708016046864994768650106Ratregion
5083017BF39066420146648411366484313Ratregion
5084730AI17794412046918984669189966Ratregion
5084344AI23371918246899658368996766Ratregion
5085343BE10205216146856725468567414Ratregion
5086419AI41235716447092056270920725Ratregion
5085888AW52926320346750457167504773Ratregion
5085988AW53595220246717892867179127Ratregion
5503088Zyx7547174187671741950Ratregion
5504078px-71c1025347133114371331395Ratregion
5504296D7S2119E10546805896368059067Ratregion
5505247Olfr455-ps140347195818971958591Ratregion
5505588UniSTS:48508494146837576068376700Ratregion
5505640UniSTS:48784996647179576871796733Ratregion
5505560GDB:45854138046648928166489360Ratregion
5505666UniSTS:48866996647179576871796733Ratregion
5505837UniSTS:49587962747175446571755091Ratregion
5505584UniSTS:48506293347248054072481472Ratregion
5505722UniSTS:49063588547179070171791585Ratregion
5501449Tcrb-C12547082924370830009Ratregion
5501874MARC_16655-16656:1017778016:121547165500971655476Ratregion
5505841UniSTS:49589182447091141970912242Ratregion
5502381RH12466932546737204267372366Ratregion
5502519RH12517711647174092571741040Ratregion
5506827G4626430246779542067795721Ratregion
Position Markers

Flank 1: (D4Rat25)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0465,987,814 - 65,987,930NCBI
Rnor_5.0465,802,990 - 65,803,106UniSTS
RGSC_v3.4465,822,169 - 65,822,285UniSTS
RGSC_v3.4465,821,936 - 65,822,382RGD
RGSC_v3.1466,098,299 - 66,098,415RGD
Celera462,013,933 - 62,014,059UniSTS
RH 3.4 Map4419.41RGD
RH 3.4 Map4419.41UniSTS
SHRSP x BN Map434.06UniSTS
SHRSP x BN Map434.06RGD
Peak: (D4Rat26)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0470,773,475 - 70,773,654NCBI
Rnor_5.04135,563,452 - 135,563,631UniSTS
RGSC_v3.4469,183,305 - 69,183,485RGD
RGSC_v3.4469,183,306 - 69,183,485UniSTS
RGSC_v3.1469,459,436 - 69,459,615RGD
Celera465,327,193 - 65,327,372UniSTS
RH 3.4 Map4419.41UniSTS
RH 3.4 Map4419.41RGD
RH 2.0 Map4437.5RGD
FHH x ACI Map444.7199RGD
Flank 2: (D4Wox7)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0473,372,694 - 73,372,824NCBI
Rnor_5.04138,066,568 - 138,066,698UniSTS
RGSC_v3.4471,729,607 - 71,729,738RGD
RGSC_v3.4471,729,608 - 71,729,738UniSTS
RGSC_v3.1472,005,738 - 72,005,868RGD
Celera467,679,337 - 67,679,467UniSTS
RH 3.4 Map4437.3UniSTS
RH 3.4 Map4437.3RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
619616Bp79Blood pressure QTL 790.0292arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4304323179575658Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)43043231145254791Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)4734240492484039Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)47850904182171018Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)423850384169318094Rat
6909122Insul22Insulin level QTL 224.63blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)42399172176238799Rat
6909128Pancm4Pancreatic morphology QTL 411.35pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)42399172176238799Rat
1578655Bmd11Bone mineral density QTL 1111femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)42463187469631874Rat
8655906Rf60Renal function QTL 603.8blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)42665474981874227Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)429549895112807890Rat
8552782Vie1Viral induced encephalitis QTL 126.4brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43182556083531021Rat
8552801Bw143Body weight QTL 1437.3body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)43182556083531021Rat
8552809Vie5Viral induced encephalitis QTL 525.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43182556083531021Rat
8655961Kidm43Kidney mass QTL 4318kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)43427793299067150Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)436615599145611886Rat
61475Aia2Adjuvant induced arthritis QTL 25.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)43768517573066691Rat
1331807Rf31Renal function QTL 312.988urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)43770327275345433Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)437703272115372927Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)43920822284208222Rat
8694439Bw168Body weight QTL 1689.570.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)43920824784208247Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44241577787415777Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)443414605155469929Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)443414792146942075Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)443414792146942075Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)446898276145611886Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)449906054145611886Rat
4889969Bss96Bone structure and strength QTL 964.9tibia size trait (VT:0100001)tibia cortical bone volume (CMO:0001725)45532485779575658Rat
4889972Bss97Bone structure and strength QTL 975.6tibia size trait (VT:0100001)tibia total bone volume (CMO:0001724)45532485779575658Rat
5685009Bmd86Bone mineral density QTL 863.7tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)45532485779575658Rat
5685012Bmd87Bone mineral density QTL 875.1tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)45532485779575658Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)455324953148360954Rat
1641833Alc21Alcohol consumption QTL 218.60.0001drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)455375865125671711Rat
634311Sach7Saccharin preference QTL 7taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)45579156482134846Rat
631546Bp86Blood pressure QTL 863.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45579156492484312Rat
61336Bp21Blood pressure QTL 214.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45579183479557856Rat
1578657Bss12Bone structure and strength QTL 128.9femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)456092756101092756Rat
1578658Bss13Bone structure and strength QTL 138femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)456092756101092756Rat
1558651Swd3Spike wave discharge measurement QTL 34.620.000024brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)45710107792990863Rat
631671Iddm11Insulin dependent diabetes mellitus QTL 113.60.0012blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)45730707579578854Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)458166424103166424Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)458640017154427984Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)458640017154427984Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)458640017154427984Rat
1549843Bw53Body weight QTL 530.0001body mass (VT:0001259)body weight gain (CMO:0000420)46043912799066957Rat
1549839Bw52Body weight QTL 520.0001body mass (VT:0001259)body weight gain (CMO:0000420)460439127113416139Rat
61418Pia5Pristane induced arthritis QTL 54.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)461038901127777403Rat
7394826Bw126Body weight QTL 1260.002body mass (VT:0001259)body weight gain (CMO:0000420)46170810388565113Rat
8552807Vie4Viral induced encephalitis QTL 47.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)46170834183531021Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)461708341113100992Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)461708341113100992Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)461708341113100992Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)percent change in mean arterial blood pressure (CMO:0002035)461708341113100992Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)percent change in systolic blood pressure (CMO:0000747)461708341113100992Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in pulse pressure (CMO:0001882)461708341113100992Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)461708341113100992Rat
2300179Bmd50Bone mineral density QTL 505.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)461975371106975371Rat
1641919Alc22Alcohol consumption QTL 220.0005drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)462947687125671711Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)463537179157286626Rat
6478684Anxrr30Anxiety related response QTL 300.00087defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)463812687108812687Rat
6478743Anxrr40Anxiety related response QTL 400.83076defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)463812687108812687Rat
6478772Anxrr49Anxiety related response QTL 490.15488defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)463812687108812687Rat
631651Bp124Blood pressure QTL 1243arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)463938412108938412Rat
2317577Eae24Experimental allergic encephalomyelitis QTL 24nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)46598781473372824Rat
2317577Eae24Experimental allergic encephalomyelitis QTL 24nervous system integrity trait (VT:0010566)percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)46598781473372824Rat
2317577Eae24Experimental allergic encephalomyelitis QTL 24nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)46598781473372824Rat
2312569Pur19Proteinuria QTL 193.40.001total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)46598924397759057Rat
2306547Iddm38Insulin dependent diabetes mellitus QTL 38blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)46639400070773654Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470773471132455556Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)471476518116476518Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)471476518116476518Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general inducing agent: myelin oligodendrocyte glycoprotein aa1-125 2317591
qtl_general this region is responsible for the severity and susceptibility of the disease 2317591
qtl_general measurement method: animals were killed 28-40 days after immunization and Eae scored on the scale of 0-4; when the disease was severe the rats were killed 2317591
qtl_general number of animals used:794 G10 generation rats from the advanced intercross line 2317591
qtl_general software used: R/QTL 2317591