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ONTOLOGY REPORT - ANNOTATIONS


Term:ceramide biosynthetic process
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Accession:GO:0046513 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid.
Synonyms:exact_synonym: ceramide anabolism;   ceramide biosynthesis;   ceramide formation;   ceramide synthesis


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ceramide biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agk acylglycerol kinase ISO
IBA
(MGI:3054595|PMID:15252046)
PMID:21873635
RGD PMID:15252046, PMID:21873635 MGI:3054595, RGD:13792537 NCBI chr 4:68,483,345...68,561,518
Ensembl chr 4:68,483,320...68,560,801
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type IEA
ISO
ISS
GO_REF:0000107
(MGI:3789553|PMID:17403930)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17403930 GO_REF:0000024 GO_REF:0000107 MGI:3789553 NCBI chr10:55,744,646...55,756,524
Ensembl chr10:55,744,588...55,756,566
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 ISS
ISO
GO_REF:0000024
(MGI:5488571|PMID:22832496)
UniProt
RGD
PMID:22832496 GO_REF:0000024 MGI:5488571 NCBI chr10:55,711,996...55,735,915
Ensembl chr10:55,712,043...55,735,911
JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 IEA
ISO
ISS
GO_REF:0000107
(PMID:12764132), (PMID:12815059)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12764132 PMID:12815059 GO_REF:0000024 GO_REF:0000107 NCBI chr16:53,998,604...54,030,006
Ensembl chr16:53,998,560...54,040,836
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 IDA
ISO
PMID:11278489
(MGI:6274955|PMID:21613224)
(PMID:11278489), (PMID:17475390)
PMID:15123644
RGD PMID:11278489 PMID:17475390 PMID:21613224, PMID:11278489, PMID:15123644 MGI:6274955, RGD:13838803, RGD:13838793 NCBI chr 1:250,557,042...250,665,083
Ensembl chr 1:250,557,044...250,630,677
JBrowse link
G Cers1 ceramide synthase 1 ISO (PMID:12105227), (PMID:12869556), (PMID:15823095), (PMID:17548428), (PMID:18541923), (PMID:24782409)
(MGI:3696321|PMID:16951403), (MGI:3764760|PMID:17977534), (MGI:5755322|PMID:26620563)
RGD PMID:12105227 PMID:12869556 PMID:15823095 PMID:16951403 PMID:17548428 PMID:17977534 PMID:18541923 PMID:24782409 PMID:26620563 MGI:3696321 MGI:3764760 MGI:5755322 NCBI chr16:20,845,580...20,860,789
Ensembl chr16:20,845,576...20,860,789
JBrowse link
G Cers2 ceramide synthase 2 ISO
IBA
(PMID:17977534), (PMID:18165233), (PMID:29632068)
PMID:21873635
(MGI:3696894|PMID:15823095), (MGI:5755322|PMID:26620563)
RGD PMID:15823095 PMID:17977534 PMID:18165233 PMID:26620563 PMID:29632068, PMID:21873635 MGI:3696894 MGI:5755322, RGD:13792537 NCBI chr 2:196,487,656...196,495,930
Ensembl chr 2:196,487,656...196,496,986
JBrowse link
G Cers3 ceramide synthase 3 ISO
IBA
(PMID:17977534), (PMID:22038835), (PMID:23754960)
PMID:21873635
(MGI:5303015|PMID:22038835)
RGD PMID:17977534 PMID:22038835 PMID:23754960, PMID:21873635 MGI:5303015, RGD:13792537 NCBI chr 1:127,706,618...127,781,041
Ensembl chr 1:127,648,234...127,781,017
JBrowse link
G Cers4 ceramide synthase 4 ISO
IBA
(PMID:17977534), (PMID:29632068)
PMID:21873635
(MGI:2679796|PMID:12912983), (MGI:3696894|PMID:15823095)
RGD PMID:12912983 PMID:15823095 PMID:17977534 PMID:29632068, PMID:21873635 MGI:2679796 MGI:3696894, RGD:13792537 NCBI chr12:4,439,750...4,474,759
Ensembl chr12:4,439,750...4,474,729
JBrowse link
G Cers5 ceramide synthase 5 ISO
IBA
(PMID:16951403), (PMID:29632068)
PMID:21873635
(MGI:3696624|PMID:16100120), (MGI:3722529|PMID:17609214), (MGI:3764760|PMID:17977534)
RGD PMID:16100120 PMID:16951403 PMID:17609214 PMID:17977534 PMID:29632068, PMID:21873635 MGI:3696624 MGI:3722529 MGI:3764760, RGD:13792537 NCBI chr 7:141,386,391...141,424,375
Ensembl chr 7:141,386,391...141,424,343
JBrowse link
G Cers6 ceramide synthase 6 ISO
IBA
(PMID:17609214), (PMID:17977534)
PMID:21873635
(MGI:3696894|PMID:15823095), (MGI:5513027|PMID:23760501), (MGI:5755322|PMID:26620563)
RGD PMID:15823095 PMID:17609214 PMID:17977534 PMID:23760501 PMID:26620563, PMID:21873635 MGI:3696894 MGI:5513027 MGI:5755322, RGD:13792537 NCBI chr 3:55,094,240...55,338,370
Ensembl chr 3:55,094,637...55,338,445
JBrowse link
G Cyp4f39 cytochrome P450, family 4, subfamily f, polypeptide 39 ISO
IBA
(PMID:26056268)
PMID:21873635
RGD PMID:26056268, PMID:21873635 RGD:13792537 NCBI chr 7:14,435,024...14,514,960
Ensembl chr 7:14,441,476...14,515,212
JBrowse link
G Degs1 delta(4)-desaturase, sphingolipid 1 ISO
IBA
MGI:3529540 (MGI:5466789|PMID:22984457)
PMID:21873635
RGD PMID:22984457, PMID:21873635 MGI:5466789, RGD:13792537 NCBI chr13:100,665,265...100,672,731
Ensembl chr13:100,666,075...100,672,731
JBrowse link
G Degs2 delta(4)-desaturase, sphingolipid 2 ISO
IBA
(MGI:3694278|PMID:16571104)
PMID:21873635
RGD PMID:16571104, PMID:21873635 MGI:3694278, RGD:13792537 NCBI chr 6:132,591,968...132,608,600
Ensembl chr 6:132,591,969...132,608,600
JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 ISO (MGI:5532629|PMID:23689133) RGD PMID:23689133 MGI:5532629 NCBI chr 5:137,255,868...137,260,486
Ensembl chr 5:137,255,908...137,260,483
JBrowse link
G Fa2h fatty acid 2-hydroxylase ISS
ISO
GO_REF:0000024
(MGI:6245295|PMID:22517924)
(PMID:15337768)
UniProt
RGD
PMID:15337768 PMID:22517924 GO_REF:0000024 MGI:6245295 NCBI chr19:43,545,380...43,596,788
Ensembl chr19:43,545,378...43,596,801
JBrowse link
G Gba glucosylceramidase beta ISO (PMID:19279011) RGD PMID:19279011 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601
JBrowse link
G LOC498300 similar to degenerative spermatocyte homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:99,369,102...99,374,051
Ensembl chr13:99,369,126...99,374,033
JBrowse link
G P2rx1 purinergic receptor P2X 1 ISO (MGI:3640029|PMID:16325464) RGD PMID:16325464 MGI:3640029 NCBI chr10:59,566,268...59,581,328
Ensembl chr10:59,566,223...59,581,325
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO (MGI:3640029|PMID:16325464) RGD PMID:16325464 MGI:3640029 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G RGD1564463 similar to Mdes protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:99,374,006...99,395,804
Ensembl chr13:99,387,950...99,395,842
JBrowse link
G Samd8 sterile alpha motif domain containing 8 ISO
IBA
(PMID:19506037)
PMID:21873635
MGI:5749225 (MGI:5632043|PMID:25605874), (MGI:5707904|PMID:25667419)
RGD PMID:19506037 PMID:25605874 PMID:25667419, PMID:21873635 MGI:5632043 MGI:5707904, RGD:13792537 NCBI chr15:2,685,504...2,731,062
Ensembl chr15:2,685,511...2,731,462
JBrowse link
G Sgms1 sphingomyelin synthase 1 ISO
IBA
(PMID:25605874)
PMID:21873635
(MGI:5632043|PMID:25605874)
RGD PMID:25605874, PMID:21873635 MGI:5632043, RGD:13792537 NCBI chr 1:250,692,448...250,951,685
Ensembl chr 1:250,691,370...250,951,697
JBrowse link
G Sgms2 sphingomyelin synthase 2 IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
MGI:4818459 (MGI:5632043|PMID:25605874)
Ensembl
RGD
PMID:25605874, PMID:21873635 GO_REF:0000107 MGI:5632043, RGD:13792537 NCBI chr 2:236,458,276...236,530,667
Ensembl chr 2:236,458,279...236,480,502
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 IMP
IBA
ISO
PMID:21873635
(PMID:18815062), (PMID:19279011)
RGD PMID:18815062 PMID:19279011, PMID:17261082, PMID:21873635 RGD:1601344, RGD:13792537 NCBI chr 1:170,383,682...170,387,525
Ensembl chr 1:170,383,682...170,387,524
JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12473648, PMID:21873635 RGD:1581395, RGD:13792537 NCBI chr20:46,212,070...46,215,183
Ensembl chr20:46,211,892...46,215,120
JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 IBA
ISO
PMID:21873635
(MGI:6450503|PMID:25180167)
(PMID:16517606), (PMID:25180167)
RGD PMID:16517606 PMID:25180167, PMID:21873635 MGI:6450503, RGD:13792537 NCBI chr11:87,522,971...87,546,687
Ensembl chr11:87,522,971...87,546,687
JBrowse link
G Smpd5 sphingomyelin phosphodiesterase 5 ISO (MGI:6450238|PMID:21183079) RGD PMID:21183079 MGI:6450238 NCBI chr 7:117,351,694...117,354,241
Ensembl chr 7:117,351,648...117,354,084
JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 ISO
IBA
(PMID:25691431)
PMID:21873635
MGI:3815115 (MGI:3814228|PMID:16216550)
RGD PMID:16216550 PMID:25691431, PMID:21873635 MGI:3814228, RGD:13792537 NCBI chr17:11,856,525...11,895,566
Ensembl chr17:11,856,525...11,895,566
JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 ISO
IBA
(PMID:25691431)
PMID:21873635
MGI:3815117 (MGI:3814228|PMID:16216550)
RGD PMID:16216550 PMID:25691431, PMID:21873635 MGI:3814228, RGD:13792537 NCBI chr 6:111,334,408...111,417,960
Ensembl chr 6:111,339,136...111,417,954
JBrowse link
G Sptlc3 serine palmitoyltransferase, long chain base subunit 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:132,560,437...132,689,313
Ensembl chr 3:132,560,506...132,692,737
JBrowse link
G Sptssa serine palmitoyltransferase, small subunit A ISO
IBA
(PMID:25691431)
PMID:21873635
RGD PMID:25691431, PMID:21873635 RGD:13792537 NCBI chr 6:75,540,132...75,551,545
Ensembl chr 6:75,540,174...75,551,625
JBrowse link
G Sptssb serine palmitoyltransferase, small subunit B ISO
IBA
MGI:5689843 (MGI:5689923|PMID:26438849)
PMID:21873635
RGD PMID:26438849, PMID:21873635 MGI:5689923, RGD:13792537 NCBI chr 2:166,654,036...166,682,325
Ensembl chr 2:166,654,043...166,682,325
JBrowse link
G Tlcd3b TLC domain containing 3B ISO (MGI:5490837|PMID:23275342) RGD PMID:23275342 MGI:5490837 NCBI chr 1:198,252,208...198,265,840
Ensembl chr 1:198,259,496...198,265,839
JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 Beta-1,3-galactosyltransferase 1 ISO (PMID:9582303) RGD PMID:9582303 NCBI chr 3:53,699,409...54,269,612
Ensembl chr 3:54,253,949...54,267,292
JBrowse link
G B3galt2 Beta-1,3-galactosyltransferase 2 ISO (PMID:9582303) RGD PMID:9582303 NCBI chr13:60,435,946...60,444,957
Ensembl chr13:60,435,946...60,444,957
JBrowse link
G B4galt3 beta-1,4-galactosyltransferase 3 ISO (PMID:9405390) RGD PMID:9405390 NCBI chr13:89,643,847...89,649,880
Ensembl chr13:89,643,881...89,649,906
JBrowse link
G Fa2h fatty acid 2-hydroxylase ISS
ISO
IEA
IMP
GO_REF:0000024
(MGI:3696647|PMID:15658937), (MGI:3826747|PMID:18815260)
GO_REF:0000041
PMID:17901466
UniProt
RGD
PMID:15658937 PMID:18815260, PMID:17901466 GO_REF:0000024 GO_REF:0000041 MGI:3696647 MGI:3826747, RGD:13825191 NCBI chr19:43,545,380...43,596,788
Ensembl chr19:43,545,378...43,596,801
JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 ISO
IBA
(MGI:1355015|PMID:10727929)
PMID:21873635
RGD PMID:10727929, PMID:21873635 MGI:1355015, RGD:13792537 NCBI chr14:84,231,473...84,247,371
Ensembl chr14:84,231,639...84,247,369
JBrowse link
G Ugt8 UDP glycosyltransferase 8 IEA
IDA
GO_REF:0000041
PMID:8713090
UniProt PMID:8713090 GO_REF:0000041, RGD:39458006 NCBI chr 2:229,644,373...229,718,678
Ensembl chr 2:229,644,382...229,718,659
JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07013843.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:259,149,018...259,150,479 JBrowse link
G B3galt4 Beta-1,3-galactosyltransferase 4 IEA
ISO
GO_REF:0000107
(PMID:9582303)
Ensembl
RGD
PMID:9582303 GO_REF:0000107 NCBI chr20:5,446,104...5,447,679
Ensembl chr20:5,446,104...5,447,673
JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 ISS
IBA
ISO
IDA
GO_REF:0000024
PMID:21873635
MGI:2158349|MGI:96074 (MGI:1331265|PMID:10021458), (MGI:83232|PMID:8855236)
(PMID:1601877), (PMID:7487055), (PMID:7890749)
PMID:3140234
UniProt
RGD
PMID:1601877 PMID:7487055 PMID:7890749 PMID:8855236 PMID:10021458, PMID:21873635, PMID:3140234 GO_REF:0000024 MGI:1331265 MGI:83232, RGD:13792537, RGD:21201261 NCBI chr 7:70,439,273...70,459,556
Ensembl chr 7:70,452,579...70,459,880
JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:259,379,653...259,918,813
Ensembl chr 2:259,379,509...259,898,525
JBrowse link
G St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:11,607,103...11,619,595
Ensembl chr 3:11,607,225...11,619,593
JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:258,025,177...259,150,709
Ensembl chr 2:258,025,177...258,052,835
JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 ISO
IBA
(MGI:1354410|PMID:10702226)
PMID:21873635
RGD PMID:10702226, PMID:21873635 MGI:1354410, RGD:13792537 NCBI chr 3:11,620,050...11,641,460
Ensembl chr 3:11,629,556...11,641,466
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 ISO (PMID:10766765) RGD PMID:10766765 NCBI chr 1:135,336,374...135,406,699
Ensembl chr 1:135,336,374...135,406,700
JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 ISO (PMID:10766765) RGD PMID:10766765 NCBI chr18:59,748,766...59,755,257
Ensembl chr18:59,748,444...59,755,226
JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 ISO (PMID:10766765) RGD PMID:10766765 NCBI chr 9:103,117,705...103,207,154
Ensembl chr 9:103,117,506...103,207,190
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 ISO (MGI:2182536|PMID:11980897) RGD PMID:11980897 MGI:2182536 NCBI chr17:80,960,785...81,002,830
Ensembl chr17:80,960,785...81,002,838
JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt5 beta-1,4-galactosyltransferase 5 ISO (MGI:6196231|PMID:30114188) RGD PMID:30114188 MGI:6196231 NCBI chr 3:164,039,731...164,055,561
Ensembl chr 3:164,039,731...164,095,878
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 ISS
ISO
IEA
GO_REF:0000024
(MGI:6196231|PMID:30114188)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:30114188 GO_REF:0000024 GO_REF:0000107 MGI:6196231 NCBI chr18:15,462,913...15,525,584
Ensembl chr18:15,462,913...15,525,579
JBrowse link
G St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ISO (PMID:8027041)
(MGI:65558|PMID:8144500)
RGD PMID:8027041 PMID:8144500 MGI:65558 NCBI chr 7:107,895,045...107,963,158
Ensembl chr 7:107,895,045...107,963,142
JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 ISO
IDA
(PMID:8920913)
(MGI:6467685|PMID:22735313), (MGI:65558|PMID:8144500)
RGD PMID:8144500 PMID:8920913 PMID:22735313, PMID:8144500 MGI:6467685 MGI:65558, RGD:68307 NCBI chr19:43,273,251...43,324,265
Ensembl chr19:43,274,493...43,290,363
JBrowse link
G St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 ISO (MGI:6467685|PMID:22735313) RGD PMID:22735313 MGI:6467685 NCBI chr 5:136,765,309...136,965,642
Ensembl chr 5:136,766,208...136,965,191
JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fa2h fatty acid 2-hydroxylase ISS
ISO
GO_REF:0000024
(MGI:5285470|PMID:21628453)
UniProt
RGD
PMID:21628453 GO_REF:0000024 MGI:5285470 NCBI chr19:43,545,380...43,596,788
Ensembl chr19:43,545,378...43,596,801
JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase ISO
IBA
ISS
(PMID:8643456)
(MGI:2180222|PMID:10430909), (MGI:3603060|PMID:16109770), (MGI:5448789|PMID:22851168), (MGI:5510915|PMID:23748427)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:8643456 PMID:10430909 PMID:16109770 PMID:22851168 PMID:23748427, PMID:21873635 GO_REF:0000024 MGI:2180222 MGI:3603060 MGI:5448789 MGI:5510915, RGD:13792537 NCBI chr 5:76,376,722...76,419,564
Ensembl chr 5:76,386,836...76,419,560
JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt6 beta-1,4-galactosyltransferase 6 IEA
ISO
GO_REF:0000107
(PMID:10320813)
Ensembl
RGD
PMID:10320813 GO_REF:0000107 NCBI chr18:15,462,913...15,525,584
Ensembl chr18:15,462,913...15,525,579
JBrowse link
negative regulation of ceramide biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 ISO
IBA
(PMID:25691431)
PMID:21873635
RGD PMID:25691431, PMID:21873635 RGD:13792537 NCBI chr 9:53,110,628...53,120,454
Ensembl chr 9:53,111,371...53,118,613
JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 ISO
IBA
(PMID:25691431)
PMID:21873635
RGD PMID:25691431, PMID:21873635 RGD:13792537 NCBI chr 7:3,242,991...3,246,085
Ensembl chr 7:3,242,991...3,246,071
JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 ISO
IBA
IEA
(PMID:25691431)
PMID:21873635
(MGI:5638294|PMID:25691431)
GO_REF:0000107
RGD
Ensembl
PMID:25691431, PMID:21873635 GO_REF:0000107 MGI:5638294, RGD:13792537 NCBI chr10:86,545,910...86,554,478
Ensembl chr10:86,547,339...86,554,478
JBrowse link
G Sphk1 sphingosine kinase 1 ISS
ISO
IEA
GO_REF:0000024
(MGI:6294167|PMID:16118219)
GO_REF:0000107
(PMID:16118219)
UniProt
RGD
Ensembl
PMID:16118219 GO_REF:0000024 GO_REF:0000107 MGI:6294167 NCBI chr10:105,498,728...105,504,401
Ensembl chr10:105,498,728...105,504,393
JBrowse link
positive regulation of ceramide biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn1 cellular communication network factor 1 IEA
ISO
GO_REF:0000107
(MGI:3849354|PMID:19364818)
Ensembl
RGD
PMID:19364818 GO_REF:0000107 MGI:3849354 NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 ISS
ISO
GO_REF:0000024
(MGI:4947032|PMID:21177474)
UniProt
RGD
PMID:21177474 GO_REF:0000024 MGI:4947032 NCBI chr10:108,095,131...108,099,483
Ensembl chr10:108,095,131...108,099,483
JBrowse link
G Pla2g6 phospholipase A2 group VI IDA RGD PMID:18936091 RGD:6482750 NCBI chr 7:120,519,479...120,559,716
Ensembl chr 7:120,519,467...120,559,347
JBrowse link
G Prkcd protein kinase C, delta ISO
IEA
(PMID:19279011)
GO_REF:0000107
RGD
Ensembl
PMID:19279011 GO_REF:0000107 NCBI chr16:6,655,131...6,675,746
Ensembl chr16:6,655,120...6,675,746
JBrowse link
G Sirt3 sirtuin 3 ISO (MGI:5755322|PMID:26620563) RGD PMID:26620563 MGI:5755322 NCBI chr 1:213,613,502...213,636,061
Ensembl chr 1:213,613,513...213,635,546
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 IMP RGD PMID:20096352 RGD:10041064 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
G Sphk2 sphingosine kinase 2 ISO (PMID:16118219)
(MGI:6294167|PMID:16118219)
RGD PMID:16118219 MGI:6294167 NCBI chr 1:101,692,972...101,700,604
Ensembl chr 1:101,692,973...101,697,277
JBrowse link
regulation of ceramide biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 ISO MGI:1913862 (MGI:6393026|PMID:31880535) RGD PMID:31880535 MGI:6393026 NCBI chr 9:53,110,628...53,120,454
Ensembl chr 9:53,111,371...53,118,613
JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 ISO MGI:2137691|MGI:2181669|MGI:6382064 (MGI:6393026|PMID:31880535) RGD PMID:31880535 MGI:6393026 NCBI chr10:86,545,910...86,554,478
Ensembl chr10:86,547,339...86,554,478
JBrowse link
G Samd8 sterile alpha motif domain containing 8 ISO (PMID:19506037) RGD PMID:19506037 NCBI chr15:2,685,504...2,731,062
Ensembl chr15:2,685,511...2,731,462
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      cellular metabolic process 10964
        cellular nitrogen compound metabolic process 6678
          cellular amide metabolic process 1514
            amide biosynthetic process 1235
              ceramide biosynthetic process 67
                ganglioside biosynthetic process + 16
                glycosylceramide biosynthetic process + 7
                lactosylceramide biosynthetic process 1
                negative regulation of ceramide biosynthetic process + 4
                omega-hydroxyceramide biosynthetic process 0
                positive regulation of ceramide biosynthetic process + 7
                regulation of ceramide biosynthetic process + 12
Path 2
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      primary metabolic process 10778
        lipid metabolic process 1372
          cellular lipid metabolic process 1021
            membrane lipid metabolic process 191
              sphingolipid metabolic process 142
                sphingolipid biosynthetic process 89
                  ceramide biosynthetic process 67
                    ganglioside biosynthetic process + 16
                    glycosylceramide biosynthetic process + 7
                    lactosylceramide biosynthetic process 1
                    negative regulation of ceramide biosynthetic process + 4
                    omega-hydroxyceramide biosynthetic process 0
                    positive regulation of ceramide biosynthetic process + 7
                    regulation of ceramide biosynthetic process + 12
paths to the root