Hagh (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 10 | 14,379,400 - 14,394,046 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 13,874,883 - 13,889,527 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 13,875,241 - 13,889,504 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 10 | 18,622,292 - 18,636,594 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 10 | 18,111,152 - 18,125,454 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 10 | 13,610,369 - 13,624,671 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 10 | 14,215,913 - 14,230,506 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 14,216,155 - 14,230,515 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 14,032,006 - 14,046,521 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 14,106,047 - 14,117,459 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 10 | 14,106,046 - 14,117,459 (+) | NCBI | | | | | Celera | 10 | 13,554,443 - 13,568,735 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q12 | NCBI | | | | |
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HAGH (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 16 | 1,807,629 - 1,827,194 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 16 | 1,795,620 - 1,827,157 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 16 | 1,857,630 - 1,877,195 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 16 | 1,799,105 - 1,817,196 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 16 | 1,799,105 - 1,817,163 | NCBI | | | | | Celera | 16 | 2,071,349 - 2,089,441 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | p13.3 | NCBI | | | | | HuRef | 16 | 1,781,967 - 1,800,219 (-) | NCBI | | HuRef | | | CHM1_1 | 16 | 1,859,060 - 1,877,163 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 16 | 1,823,468 - 1,843,048 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Hagh (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 17 | 25,056,863 - 25,083,424 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 17 | 25,059,117 - 25,083,424 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 17 | 24,839,781 - 24,864,450 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 17 | 24,840,143 - 24,864,450 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 17 | 24,987,435 - 25,001,395 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 17 | 24,578,147 - 24,592,050 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 17 | 25,377,454 - 25,391,223 (+) | NCBI | | Celera | | | Cytogenetic Map | 17 | A3.3 | NCBI | | | | | cM Map | 17 | 12.53 | NCBI | | | | |
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Hagh (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955442 | 15,451,910 - 15,465,211 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955442 | 15,451,910 - 15,465,211 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LOC100992459 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 18 | 2,075,668 - 2,122,827 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 16 | 5,857,103 - 5,880,906 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 16 | 431,417 - 455,211 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 16 | 1,864,372 - 1,865,276 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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HAGH (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 6 | 39,076,364 - 39,105,646 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 6 | 39,084,513 - 39,105,592 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 6 | 40,323,559 - 40,344,553 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 6 | 39,400,917 - 39,422,090 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 6 | 39,375,311 - 39,422,080 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 6 | 39,077,630 - 39,098,788 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 6 | 39,050,207 - 39,071,366 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 6 | 39,528,902 - 39,549,839 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Hagh (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024409344 | 104,510,713 - 104,528,007 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936694 | 2,181,501 - 2,194,007 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936694 | 2,181,475 - 2,200,469 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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HAGH (Sus scrofa - pig) |
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HAGH (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 5 | 1,705,436 - 1,730,896 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 5 | 1,713,542 - 1,730,797 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666068 | 29,352,945 - 29,370,176 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Hagh (Heterocephalus glaber - naked mole-rat) |
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