Pank3 (pantothenate kinase 3) - Rat Genome Database

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Gene: Pank3 (pantothenate kinase 3) Rattus norvegicus
Analyze
Symbol: Pank3
Name: pantothenate kinase 3
RGD ID: 1310531
Description: Predicted to enable several functions, including heterocyclic compound binding activity; pantothenate kinase activity; and protein homodimerization activity. Predicted to be involved in coenzyme A biosynthetic process and phosphorylation. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Orthologous to human PANK3 (pantothenate kinase 3); PARTICIPATES IN pantothenic acid metabolic pathway; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; acetamide.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC360511
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81020,733,191 - 20,757,017 (+)NCBIGRCr8
mRatBN7.21020,229,129 - 20,252,955 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1020,229,129 - 20,252,955 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1024,979,846 - 25,004,093 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01024,468,370 - 24,492,618 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01019,952,903 - 19,976,746 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01020,591,432 - 20,615,258 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1020,591,432 - 20,615,258 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01020,465,068 - 20,488,894 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41020,679,354 - 20,699,173 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11020,680,400 - 20,699,788 (+)NCBI
Celera1019,848,167 - 19,871,989 (+)NCBICelera
Cytogenetic Map10q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
(S)-nicotine  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
5-azacytidine  (ISO)
acetamide  (EXP)
acrolein  (ISO)
all-trans-retinoic acid  (ISO)
alpha-pinene  (ISO)
alpha-Zearalanol  (EXP)
amitrole  (EXP)
amphetamine  (EXP)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
cadmium dichloride  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
clozapine  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
Dibutyl phosphate  (ISO)
dicrotophos  (ISO)
dioxygen  (ISO)
ethyl methanesulfonate  (ISO)
fluoxetine  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
gentamycin  (EXP)
indole-3-methanol  (EXP)
isoflavones  (ISO)
isotretinoin  (ISO)
L-methionine  (ISO)
leflunomide  (ISO)
methyl methanesulfonate  (ISO)
miconazole  (ISO)
nickel dichloride  (ISO)
nicotine  (ISO)
ozone  (ISO)
parathion  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
phenobarbital  (ISO)
pirinixic acid  (ISO)
propiconazole  (ISO)
rotenone  (ISO)
sarin  (ISO)
sodium arsenate  (ISO)
sunitinib  (ISO)
tamibarotene  (ISO)
testosterone  (ISO)
tetraphene  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
triphenyl phosphate  (EXP,ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA,ISO)
cytosol  (IBA,IEA,ISO)
nucleus  (IBA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:16040613   PMID:17631502   PMID:20797618   PMID:23152917   PMID:27555321   PMID:30927326  


Genomics

Comparative Map Data
Pank3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81020,733,191 - 20,757,017 (+)NCBIGRCr8
mRatBN7.21020,229,129 - 20,252,955 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1020,229,129 - 20,252,955 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1024,979,846 - 25,004,093 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01024,468,370 - 24,492,618 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01019,952,903 - 19,976,746 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01020,591,432 - 20,615,258 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1020,591,432 - 20,615,258 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01020,465,068 - 20,488,894 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41020,679,354 - 20,699,173 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11020,680,400 - 20,699,788 (+)NCBI
Celera1019,848,167 - 19,871,989 (+)NCBICelera
Cytogenetic Map10q12NCBI
PANK3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385168,548,495 - 168,579,368 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5168,548,495 - 168,579,368 (-)EnsemblGRCh38hg38GRCh38
GRCh375167,975,500 - 168,006,373 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365167,915,208 - 167,939,166 (-)NCBINCBI36Build 36hg18NCBI36
Build 345167,915,207 - 167,939,166NCBI
Celera5164,017,978 - 164,041,945 (-)NCBICelera
Cytogenetic Map5q34NCBI
HuRef5163,081,076 - 163,105,105 (-)NCBIHuRef
CHM1_15167,415,556 - 167,439,549 (-)NCBICHM1_1
T2T-CHM13v2.05169,083,277 - 169,114,160 (-)NCBIT2T-CHM13v2.0
Pank3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391135,660,322 - 35,682,112 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1135,660,311 - 35,682,112 (+)EnsemblGRCm39 Ensembl
GRCm381135,769,495 - 35,791,285 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1135,769,484 - 35,791,285 (+)EnsemblGRCm38mm10GRCm38
MGSCv371135,582,997 - 35,604,787 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361135,612,907 - 35,629,937 (+)NCBIMGSCv36mm8
Celera1139,552,538 - 39,574,327 (+)NCBICelera
Cytogenetic Map11A4NCBI
cM Map1121.96NCBI
Pank3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540821,630,849 - 21,652,999 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540821,630,849 - 21,643,432 (-)NCBIChiLan1.0ChiLan1.0
PANK3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24163,711,302 - 163,742,205 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15161,850,847 - 161,881,956 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05163,913,842 - 163,944,939 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15170,685,413 - 170,709,211 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5170,685,413 - 170,709,211 (-)Ensemblpanpan1.1panPan2
PANK3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1443,168,407 - 43,192,451 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl443,137,709 - 43,186,022 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha443,124,952 - 43,148,972 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0443,590,196 - 43,614,178 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl443,559,492 - 43,614,148 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1443,360,020 - 43,383,978 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0443,554,528 - 43,578,544 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0444,060,307 - 44,084,283 (+)NCBIUU_Cfam_GSD_1.0
Pank3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721397,194,374 - 97,219,607 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936622809,880 - 828,849 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936622810,016 - 836,103 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PANK3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1655,313,324 - 55,340,065 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11655,313,333 - 55,340,070 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21659,896,478 - 59,917,704 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PANK3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12370,784,208 - 70,809,012 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2370,785,078 - 70,808,932 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660347,871,157 - 7,918,293 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pank3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473321,382,414 - 21,400,396 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473321,382,404 - 21,401,815 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pank3
165 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:491
Count of miRNA genes:255
Interacting mature miRNAs:327
Transcripts:ENSRNOT00000059780
Prediction methods:Microtar, Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
6893352Bw100Body weight QTL 1000.330.6body mass (VT:0001259)body weight (CMO:0000012)11590666560906665Rat
9589136Insul27Insulin level QTL 2710.460.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)101147401056474010Rat
631564Apr3Acute phase response QTL 33.9blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)101527595560275955Rat
8662860Vetf10Vascular elastic tissue fragility QTL 10artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)10615418273453136Rat
2313066Bss63Bone structure and strength QTL 631.40.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)10538701450387014Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat
2313064Bmd71Bone mineral density QTL 710.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)10538701450387014Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
1354587Kidm21Kidney mass QTL 213.3kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)101502851360430477Rat
6893350Bw99Body weight QTL 990.870.16body mass (VT:0001259)body weight (CMO:0000012)11590666560906665Rat
634329Pia15Pristane induced arthritis QTL 153.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10124158324Rat
1578761Stresp21Stress response QTL 213.3thymus mass (VT:0004954)thymus wet weight (CMO:0000855)10637574651375746Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135225947Rat
7387235Uae41Urinary albumin excretion QTL 415.260.1874urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)10129497586Rat
2298544Neuinf9Neuroinflammation QTL 94.6nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)10580199062146030Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1041834445418344Rat
2313081Bss64Bone structure and strength QTL 641.30.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)10538701450387014Rat
1554317Bmd4Bone mineral density QTL 49.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)101981604299406971Rat
1598852Anxrr19Anxiety related response QTL 195.07body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)101816784163167841Rat
2313087Bmd80Bone mineral density QTL 803.20.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)101960648364606483Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138328221Rat
2313095Bss62Bone structure and strength QTL 621.50.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)10538701450387014Rat
631532Cm50Cardiac mass QTL 506.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)101790711351786432Rat
7411611Foco17Food consumption QTL 1718.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)10142315980Rat
2301967Cm73Cardiac mass QTL 734.55heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)101448701189062041Rat
2303118Mamtr7Mammary tumor resistance QTL 70.003mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)109658275104670812Rat
631268Cia21Collagen induced arthritis QTL 213.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1014487011104060283Rat
9590268Scort13Serum corticosterone level QTL 133.260.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
2313104Bss61Bone structure and strength QTL 610.90.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)10538701450387014Rat
61427Cia16Collagen induced arthritis QTL 163.2joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10635789696121100Rat
9590310Scort19Serum corticosterone level QTL 196.30.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)101147401056474010Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014487011107057807Rat
2313055Bw96Body weight QTL 963.60.0001body mass (VT:0001259)body weight (CMO:0000012)101960648364606483Rat

Markers in Region
RH128690  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21020,252,735 - 20,252,948 (+)MAPPERmRatBN7.2
mRatBN7.21650,650,027 - 50,650,240 (+)MAPPERmRatBN7.2
Rnor_6.01653,724,294 - 53,724,506NCBIRnor6.0
Rnor_6.01020,615,039 - 20,615,251NCBIRnor6.0
Rnor_5.01653,441,043 - 53,441,255UniSTSRnor5.0
Rnor_5.01020,488,675 - 20,488,887UniSTSRnor5.0
RGSC_v3.41020,703,351 - 20,703,563UniSTSRGSC3.4
RGSC_v3.41653,988,588 - 53,988,800UniSTSRGSC3.4
Celera1648,590,817 - 48,591,029UniSTS
Celera1019,871,770 - 19,871,982UniSTS
Cytogenetic Map10q12UniSTS
BE107638  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21020,247,232 - 20,247,383 (+)MAPPERmRatBN7.2
Rnor_6.01020,609,536 - 20,609,686NCBIRnor6.0
Rnor_5.01020,483,172 - 20,483,322UniSTSRnor5.0
RGSC_v3.41020,697,848 - 20,697,998UniSTSRGSC3.4
Celera1019,866,271 - 19,866,421UniSTS
RH 3.4 Map10215.42UniSTS
Cytogenetic Map10q12UniSTS
RH141660  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21020,251,077 - 20,251,285 (+)MAPPERmRatBN7.2
Rnor_6.01020,613,381 - 20,613,588NCBIRnor6.0
Rnor_5.01020,487,017 - 20,487,224UniSTSRnor5.0
RGSC_v3.41020,701,693 - 20,701,900UniSTSRGSC3.4
Celera1019,870,112 - 19,870,319UniSTS
RH 3.4 Map10216.22UniSTS
Cytogenetic Map10q12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000059780   ⟹   ENSRNOP00000056531
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1020,229,129 - 20,252,955 (+)Ensembl
Rnor_6.0 Ensembl1020,591,432 - 20,615,258 (+)Ensembl
RefSeq Acc Id: NM_001108272   ⟹   NP_001101742
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81020,733,191 - 20,757,017 (+)NCBI
mRatBN7.21020,229,129 - 20,252,955 (+)NCBI
Rnor_6.01020,591,432 - 20,615,258 (+)NCBI
Rnor_5.01020,465,068 - 20,488,894 (+)NCBI
RGSC_v3.41020,679,354 - 20,699,173 (+)RGD
Celera1019,848,167 - 19,871,989 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001101742 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDM04092 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000056531
  ENSRNOP00000056531.2
RefSeq Acc Id: NP_001101742   ⟸   NM_001108272
- UniProtKB: D3ZUQ7 (UniProtKB/TrEMBL),   A6HDI7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000056531   ⟸   ENSRNOT00000059780

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZUQ7-F1-model_v2 AlphaFold D3ZUQ7 1-370 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13697102
Promoter ID:EPDNEW_R7627
Type:initiation region
Name:Pank3_1
Description:pantothenate kinase 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01020,591,430 - 20,591,490EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310531 AgrOrtholog
BioCyc Gene G2FUF-25542 BioCyc
BioCyc Pathway COA-PWY-1 [superpathway of coenzyme A biosynthesis III (mammals)] BioCyc
BioCyc Pathway Image COA-PWY-1 BioCyc
Ensembl Genes ENSRNOG00000007419 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000059780 ENTREZGENE
  ENSRNOT00000059780.4 UniProtKB/TrEMBL
Gene3D-CATH 3.30.420.40 UniProtKB/TrEMBL
  3.30.420.510 UniProtKB/TrEMBL
InterPro ATPase_NBD UniProtKB/TrEMBL
  PanK_eukar UniProtKB/TrEMBL
KEGG Report rno:360511 UniProtKB/TrEMBL
NCBI Gene 360511 ENTREZGENE
PANTHER PANTOTHENATE KINASE 3 UniProtKB/TrEMBL
  PTHR12280 UniProtKB/TrEMBL
Pfam Fumble UniProtKB/TrEMBL
PhenoGen Pank3 PhenoGen
RatGTEx ENSRNOG00000007419 RatGTEx
Superfamily-SCOP SSF53067 UniProtKB/TrEMBL
UniProt A6HDI7 ENTREZGENE, UniProtKB/TrEMBL
  D3ZUQ7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Pank3  pantothenate kinase 3   Pank3_predicted  pantothenate kinase 3 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Pank3_predicted  pantothenate kinase 3 (predicted)      Symbol and Name status set to approved 70820 APPROVED