Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:sphingomyelin biosynthetic process
go back to main search page
Accession:GO:0006686 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine.
Synonyms:exact_synonym: sphingomyelin anabolism;   sphingomyelin biosynthesis;   sphingomyelin formation;   sphingomyelin synthesis



show annotations for term's descendants           Sort by:
 
sphingomyelin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:23560799) RGD PMID:23560799 NCBI chr10:94,917,520...94,991,199
Ensembl chr10:94,917,520...94,990,988
JBrowse link
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 acts_upstream_of ISO MGI:1913862 (MGI:6393026|PMID:31880535) RGD PMID:31880535 MGI:6393026 NCBI chr 9:48,243,365...48,253,316
Ensembl chr 9:48,237,572...48,253,211
JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:2137691|MGI:2181669|MGI:6382064 (MGI:6393026|PMID:31880535)
Ensembl
RGD
PMID:31880535 GO_REF:0000107 MGI:6393026 NCBI chr10:83,590,052...83,598,620
Ensembl chr10:83,590,071...83,598,620
JBrowse link
G Osbp oxysterol binding protein involved_in ISO
IEA
(PMID:12023275)
GO_REF:0000107
RGD
Ensembl
PMID:12023275 GO_REF:0000107 NCBI chr 1:208,888,697...208,918,511
Ensembl chr 1:208,887,895...208,918,506
JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase acts_upstream_of_or_within ISO (MGI:5707904|PMID:25667419) RGD PMID:25667419 MGI:5707904 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013
JBrowse link
G Sgms1 sphingomyelin synthase 1 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:6221394|PMID:27892528)
GO_REF:0000024
(PMID:14685263), (PMID:14976195), (PMID:17982138)
RGD
HGNC-UCL
PMID:14685263 PMID:14976195 PMID:17982138 PMID:27892528 PMID:21873635 GO_REF:0000024 MGI:6221394, RGD:13792537 NCBI chr 1:229,996,673...230,259,591
Ensembl chr 1:229,998,119...230,259,603
JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(MGI:6221394|PMID:27892528)
(MGI:5707904|PMID:25667419)
PMID:21873635
(PMID:14685263), (PMID:17982138)
Ensembl
RGD
PMID:14685263 PMID:17982138 PMID:25667419 PMID:27892528 PMID:21873635 GO_REF:0000107 MGI:5707904 MGI:6221394, RGD:13792537 NCBI chr 2:219,889,809...219,967,704
Ensembl chr 2:219,893,572...219,967,546
JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 involved_in
acts_upstream_of_or_within
ISO (MGI:5749304|PMID:26301690)
MGI:3815115 (MGI:3814228|PMID:16216550)
RGD PMID:16216550 PMID:26301690 MGI:3814228 MGI:5749304 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 acts_upstream_of_or_within ISO MGI:3815117 (MGI:3814228|PMID:16216550) RGD PMID:16216550 MGI:3814228 NCBI chr 6:106,948,681...107,031,584
Ensembl chr 6:106,950,949...107,031,542
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:12023275) RGD PMID:12023275 NCBI chr 9:105,177,904...105,208,400
Ensembl chr 9:105,177,907...105,207,847
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      cellular metabolic process 10719
        cellular biosynthetic process 5932
          phospholipid biosynthetic process 235
            sphingomyelin biosynthetic process 10
Path 2
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      primary metabolic process 10535
        lipid metabolic process 1388
          cellular lipid metabolic process 1035
            membrane lipid metabolic process 193
              sphingolipid metabolic process 147
                sphingomyelin metabolic process 20
                  sphingomyelin biosynthetic process 10
paths to the root