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Gene: Sptssb (serine palmitoyltransferase, small subunit B) Rattus norvegicus
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Symbol: Sptssb
Name: serine palmitoyltransferase, small subunit B
RGD ID: 2324614
Description: Predicted to contribute to serine C-palmitoyltransferase activity. Predicted to be involved in ceramide biosynthetic process; endoplasmic reticulum organization; and regulation of serine C-palmitoyltransferase activity. Predicted to localize to serine C-palmitoyltransferase complex. Orthologous to human SPTSSB (serine palmitoyltransferase small subunit B); INTERACTS WITH 6-propyl-2-thiouracil; cobalt dichloride; 17beta-estradiol (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: androgen down regulated in mouse prostate; LOC100362555; serine palmitoyltransferase small subunit B
Orthologs:
Homo sapiens (human) : SPTSSB (serine palmitoyltransferase small subunit B)  HGNC  Alliance
Mus musculus (house mouse) : Sptssb (serine palmitoyltransferase, small subunit B)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sptssb (serine palmitoyltransferase small subunit B)
Canis lupus familiaris (dog) : SPTSSB (serine palmitoyltransferase small subunit B)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sptssb (serine palmitoyltransferase small subunit B)
Sus scrofa (pig) : SPTSSB (serine palmitoyltransferase small subunit B)
Chlorocebus sabaeus (African green monkey) : SPTSSB (serine palmitoyltransferase small subunit B)
Heterocephalus glaber (naked mole-rat) : Sptssb (serine palmitoyltransferase small subunit B)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02166,654,036 - 166,682,325 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2166,654,043 - 166,682,325 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02186,020,417 - 186,049,284 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42159,961,911 - 159,962,141 (-)NCBIRGSC3.4rn4RGSC3.4
Celera2148,466,971 - 148,495,254 (-)NCBICelera
Cytogenetic Map2q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sptssb
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2324614
Created: 2010-05-06
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.