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varicose veins - Ontology Report - Rat Genome Database

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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:varicose veins
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Accession:DOID:799 term browser browse the term
Definition:A vein disease that is characterized by swollen, twisted veins visible just under the surface of the skin. (DO)
Synonyms:exact_synonym: varices;   varicose disease;   varicose vein;   varix;   venous ectasia;   venous varices
 xref: ICD10CM:I83.90;   MESH:D014648;   MIM:192200;   MONDO:0008638;   NCI:C35114
For additional species annotation, visit the Alliance of Genome Resources.

Please select species to view GViewer data.

show annotations for term's descendants           Sort by:
varicose veins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G N Dll4 delta like canonical Notch ligand 4 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004624804:8,179,729...8,189,001
Ensembl chrNW_004624804:8,179,731...8,191,284 		JBrowse link
G G DLL4 delta like canonical Notch ligand 4 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr26:42,056,473...42,066,283
Ensembl chr26:42,056,331...42,065,828 		JBrowse link
G P DLL4 delta like canonical Notch ligand 4 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr 1:130,376,720...130,386,411
Ensembl chr 1:130,376,721...130,386,411 		JBrowse link
G S Dll4 delta like canonical Notch ligand 4 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004936471:4,320,235...4,330,251
Ensembl chrNW_004936471:4,320,933...4,330,253 		JBrowse link
G D DLL4 delta like canonical Notch ligand 4 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr30:8,059,463...8,068,742
Ensembl chr30:8,059,512...8,067,940 		JBrowse link
G B DLL4 delta like canonical Notch ligand 4 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr15:19,871,584...19,881,817
Ensembl chr15:38,121,574...38,129,471 		JBrowse link
G C Dll4 delta like canonical Notch ligand 4 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004955416:7,807,049...7,816,346
Ensembl chrNW_004955416:7,807,049...7,817,420 		JBrowse link
G R Dll4 delta like canonical Notch ligand 4 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr 3:126,770,945...126,780,769
Ensembl chr 3:106,316,986...106,326,931 		JBrowse link
G M Dll4 delta like canonical Notch ligand 4 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr 2:119,156,286...119,166,145
Ensembl chr 2:119,156,265...119,166,443 		JBrowse link
G H DLL4 delta like canonical Notch ligand 4 IEP mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr15:40,929,340...40,939,073
Ensembl chr15:40,929,340...40,939,073 		JBrowse link
G N Dpt dermatopontin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chrNW_004624826:6,628,059...6,656,064
Ensembl chrNW_004624826:6,627,947...6,656,151 		JBrowse link
G G DPT dermatopontin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr25:60,295,900...60,329,678
Ensembl chr25:60,295,709...60,349,682 		JBrowse link
G P DPT dermatopontin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 4:82,287,657...82,319,380
Ensembl chr 4:82,287,730...82,319,366 		JBrowse link
G S Dpt dermatopontin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chrNW_004936481:17,723,108...17,747,712
Ensembl chrNW_004936481:17,722,977...17,747,718 		JBrowse link
G D DPT dermatopontin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 7:29,830,415...29,855,479
Ensembl chr 7:29,830,415...29,857,061 		JBrowse link
G B DPT dermatopontin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 1:144,182,053...144,218,632
Ensembl chr 1:147,904,337...147,938,208 		JBrowse link
G C Dpt dermatopontin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chrNW_004955462:8,451,159...8,480,085
Ensembl chrNW_004955462:8,451,112...8,480,827 		JBrowse link
G R Dpt dermatopontin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr13:79,656,341...79,684,759
Ensembl chr13:77,123,115...77,151,639 		JBrowse link
G M Dpt dermatopontin ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 1:164,624,232...164,651,843
Ensembl chr 1:164,624,213...164,651,835 		JBrowse link
G H DPT dermatopontin EXP CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 1:168,695,468...168,729,206
Ensembl chr 1:168,695,468...168,729,206 		JBrowse link
G N Efnb2 ephrin B2 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004624793:5,089,675...5,130,022
Ensembl chrNW_004624793:5,089,639...5,130,503 		JBrowse link
G G EFNB2 ephrin B2 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr 3:84,904,421...84,949,292
Ensembl chr 3:84,904,435...84,949,465 		JBrowse link
G P EFNB2 ephrin B2 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr11:74,188,337...74,232,768
Ensembl chr11:74,186,640...74,233,354 		JBrowse link
G S Efnb2 ephrin B2 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004936472:5,138,751...5,181,630
Ensembl chrNW_004936472:5,138,745...5,181,668 		JBrowse link
G D EFNB2 ephrin B2 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr22:55,567,992...55,609,210
Ensembl chr22:55,566,039...55,609,443 		JBrowse link
G B EFNB2 ephrin B2 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr13:87,629,831...87,675,652
Ensembl chr13:106,770,296...106,815,548 		JBrowse link
G C Efnb2 ephrin B2 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004955404:5,000,906...5,030,068
Ensembl chrNW_004955404:5,000,906...5,030,126 		JBrowse link
G R Efnb2 ephrin B2 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr16:87,485,215...87,529,224
Ensembl chr16:80,783,417...80,824,391 		JBrowse link
G M Efnb2 ephrin B2 ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242 		JBrowse link
G H EFNB2 ephrin B2 IEP mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr13:106,489,745...106,535,662
Ensembl chr13:106,489,745...106,535,662 		JBrowse link
G N Eln elastin ISO ClinVar Annotator: match by term: Varicose disease ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004624740:13,856,932...13,886,266 JBrowse link
G G ELN elastin ISO ClinVar Annotator: match by term: Varicose disease ClinVar PMID:25741868 PMID:28492532 NCBI chr28:8,999,164...9,048,703 JBrowse link
G P ELN elastin ISO ClinVar Annotator: match by term: Varicose disease ClinVar PMID:25741868 PMID:28492532 NCBI chr 3:11,214,194...11,245,891
Ensembl chr 3:11,214,205...11,244,897 		JBrowse link
G S Eln elastin ISO ClinVar Annotator: match by term: Varicose disease ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004936543:3,135,169...3,165,023 JBrowse link
G D ELN elastin ISO ClinVar Annotator: match by term: Varicose disease ClinVar PMID:25741868 PMID:28492532 NCBI chr 6:6,299,524...6,331,425
Ensembl chr 6:6,300,727...6,331,325 		JBrowse link
G B ELN elastin ISO ClinVar Annotator: match by term: Varicose disease ClinVar PMID:25741868 PMID:28492532
G C Eln elastin ISO ClinVar Annotator: match by term: Varicose disease ClinVar PMID:25741868 PMID:28492532 NCBI chrNW_004955456:13,788,992...13,818,836 JBrowse link
G R Eln elastin ISO ClinVar Annotator: match by term: Varicose disease ClinVar PMID:25741868 PMID:28492532 NCBI chr12:27,604,983...27,648,413
Ensembl chr12:21,968,544...22,011,928 		JBrowse link
G M Eln elastin ISO ClinVar Annotator: match by term: Varicose disease ClinVar PMID:25741868 PMID:28492532 NCBI chr 5:134,731,449...134,776,300
Ensembl chr 5:134,731,447...134,776,177 		JBrowse link
G H ELN elastin IAGP ClinVar Annotator: match by term: Varicose disease ClinVar PMID:25741868 PMID:28492532 NCBI chr 7:74,028,173...74,069,907
Ensembl chr 7:74,027,789...74,069,907 		JBrowse link
G N Hey2 hes related family bHLH transcription factor with YRPW motif 2 ISO mRNA,protein:increased expression:nucleus, vein: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004624753:375,163...394,402
Ensembl chrNW_004624753:375,279...384,379 		JBrowse link
G G HEY2 hes related family bHLH transcription factor with YRPW motif 2 ISO mRNA,protein:increased expression:nucleus, vein: RGD PMID:26808710 RGD:11529441 NCBI chr13:47,965,808...47,977,435
Ensembl chr13:47,964,847...47,977,346 		JBrowse link
G P HEY2 hes related family bHLH transcription factor with YRPW motif 2 ISO mRNA,protein:increased expression:nucleus, vein: RGD PMID:26808710 RGD:11529441 NCBI chr 1:37,219,887...37,231,321
Ensembl chr 1:37,219,883...37,231,385 		JBrowse link
G S Hey2 hes related family bHLH transcription factor with YRPW motif 2 ISO mRNA,protein:increased expression:nucleus, vein: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004936639:3,705,225...3,714,696
Ensembl chrNW_004936639:3,703,447...3,716,820 		JBrowse link
G D HEY2 hes related family bHLH transcription factor with YRPW motif 2 ISO mRNA,protein:increased expression:nucleus, vein: RGD PMID:26808710 RGD:11529441 NCBI chr 1:64,630,656...64,646,546 JBrowse link
G B HEY2 hes related family bHLH transcription factor with YRPW motif 2 ISO mRNA,protein:increased expression:nucleus, vein: RGD PMID:26808710 RGD:11529441 NCBI chr 6:123,527,180...123,538,794
Ensembl chr 6:127,647,547...127,659,056 		JBrowse link
G C Hey2 hes related family bHLH transcription factor with YRPW motif 2 ISO mRNA,protein:increased expression:nucleus, vein: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004955436:7,060,930...7,070,610
Ensembl chrNW_004955436:7,060,930...7,070,030 		JBrowse link
G R Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO mRNA,protein:increased expression:nucleus, vein: RGD PMID:26808710 RGD:11529441 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218 		JBrowse link
G M Hey2 hairy/enhancer-of-split related with YRPW motif 2 ISO mRNA,protein:increased expression:nucleus, vein: RGD PMID:26808710 RGD:11529441 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797 		JBrowse link
G H HEY2 hes related family bHLH transcription factor with YRPW motif 2 IEP mRNA,protein:increased expression:nucleus, vein: RGD PMID:26808710 RGD:11529441 NCBI chr 6:125,749,632...125,761,269
Ensembl chr 6:125,747,664...125,761,269 		JBrowse link
G N Lum lumican ISO RGD PMID:15871312 RGD:1582120 NCBI chrNW_004624750:15,553,400...15,560,746
Ensembl chrNW_004624750:15,553,383...15,559,408 		JBrowse link
G G LUM lumican ISO RGD PMID:15871312 RGD:1582120 NCBI chr11:86,510,824...86,519,008
Ensembl chr11:86,509,722...86,519,010 		JBrowse link
G P LUM lumican ISO RGD PMID:15871312 RGD:1582120 NCBI chr 5:91,748,871...91,756,381
Ensembl chr 5:91,748,885...91,757,598 		JBrowse link
G S Lum lumican ISO RGD PMID:15871312 RGD:1582120 NCBI chrNW_004936507:7,847,761...7,855,311
Ensembl chrNW_004936507:7,846,681...7,855,455 		JBrowse link
G D LUM lumican ISO RGD PMID:15871312 RGD:1582120 NCBI chr15:31,792,872...31,800,444
Ensembl chr15:31,793,233...31,800,912 		JBrowse link
G B LUM lumican ISO RGD PMID:15871312 RGD:1582120 NCBI chr12:88,636,825...88,644,665
Ensembl chr12:91,952,277...91,960,388 		JBrowse link
G C Lum lumican ISO RGD PMID:15871312 RGD:1582120 NCBI chrNW_004955405:28,299,966...28,307,982
Ensembl chrNW_004955405:28,298,988...28,308,054 		JBrowse link
G R Lum lumican ISO RGD PMID:15871312 RGD:1582120 NCBI chr 7:34,245,323...34,252,510
Ensembl chr 7:32,358,614...32,365,793 		JBrowse link
G M Lum lumican ISO RGD PMID:15871312 RGD:1582120 NCBI chr10:97,401,363...97,408,565
Ensembl chr10:97,400,990...97,408,565 		JBrowse link
G H LUM lumican IEP RGD PMID:15871312 RGD:1582120 NCBI chr12:91,102,629...91,111,494
Ensembl chr12:91,102,629...91,111,494 		JBrowse link
G N Mgp matrix Gla protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chrNW_004624752:23,146,025...23,149,266
Ensembl chrNW_004624752:23,146,166...23,149,048 		JBrowse link
G G MGP matrix Gla protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr11:14,776,668...14,780,796
Ensembl chr11:14,776,209...14,780,947 		JBrowse link
G P MGP matrix Gla protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 5:57,665,272...57,669,360
Ensembl chr 5:57,665,248...57,669,764 		JBrowse link
G S Mgp matrix Gla protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chrNW_004936587:2,601,419...2,605,848
Ensembl chrNW_004936587:2,601,312...2,605,870 		JBrowse link
G D MGP matrix Gla protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr27:31,735,301...31,738,673
Ensembl chr27:31,734,660...31,738,673 		JBrowse link
G B MGP matrix Gla protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr12:14,887,806...14,891,796
Ensembl chr12:15,284,883...15,288,523 		JBrowse link
G C Mgp matrix Gla protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chrNW_004955413:11,614,851...11,618,090
Ensembl chrNW_004955413:11,615,078...11,618,024 		JBrowse link
G R Mgp matrix Gla protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 4:171,497,472...171,500,888
Ensembl chr 4:169,766,279...169,769,667 		JBrowse link
G M Mgp matrix Gla protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 6:136,849,433...136,852,821
Ensembl chr 6:136,849,433...136,852,821 		JBrowse link
G H MGP matrix Gla protein EXP CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr12:14,880,864...14,885,854
Ensembl chr12:14,880,864...14,885,857 		JBrowse link
G N Mmp1 matrix metallopeptidase 1 ISO RGD PMID:12175972 RGD:1582540 NCBI chrNW_004624878:71,642...79,660
Ensembl chrNW_004624878:71,642...79,602 		JBrowse link
G G MMP1 matrix metallopeptidase 1 ISO RGD PMID:12175972 RGD:1582540 NCBI chr 1:94,167,507...94,177,357
Ensembl chr 1:94,167,219...94,176,767 		JBrowse link
G P MMP1 matrix metallopeptidase 1 ISO RGD PMID:12175972 RGD:1582540 NCBI chr 9:33,411,738...33,420,205
Ensembl chr 9:33,411,065...33,420,076 		JBrowse link
G S Mmp1 matrix metallopeptidase 1 ISO RGD PMID:12175972 RGD:1582540 NCBI chrNW_004936551:5,167,909...5,175,149
Ensembl chrNW_004936551:5,168,044...5,174,857 		JBrowse link
G D MMP1 matrix metallopeptidase 1 ISO RGD PMID:12175972 RGD:1582540 NCBI chr 5:28,978,385...28,986,644
Ensembl chr 5:28,978,473...28,986,648 		JBrowse link
G B MMP1 matrix metallopeptidase 1 ISO RGD PMID:12175972 RGD:1582540 NCBI chr11:97,730,545...97,739,190
Ensembl chr11:101,221,393...101,230,104 		JBrowse link
G R Mmp1 matrix metallopeptidase 1 ISO RGD PMID:12175972 RGD:1582540 NCBI chr 8:12,943,453...12,963,966
Ensembl chr 8:4,658,588...4,679,097 		JBrowse link
G H MMP1 matrix metallopeptidase 1 IDA RGD PMID:12175972 RGD:1582540 NCBI chr11:102,789,919...102,798,160
Ensembl chr11:102,789,401...102,798,160 		JBrowse link
G M Mmp1a matrix metallopeptidase 1a (interstitial collagenase) ISO RGD PMID:12175972 RGD:1582540 NCBI chr 9:7,464,141...7,476,870
Ensembl chr 9:7,464,141...7,476,857 		JBrowse link
G M Mmp1b matrix metallopeptidase 1b (interstitial collagenase) ISO RGD PMID:12175972 RGD:1582540 NCBI chr 9:7,367,670...7,388,026
Ensembl chr 9:7,368,239...7,388,047 		JBrowse link
G N Mmp9 matrix metallopeptidase 9 ISO RGD PMID:16465063 RGD:1582620 NCBI chrNW_004624790:8,584,399...8,591,763
Ensembl chrNW_004624790:8,583,457...8,591,713 		JBrowse link
G G MMP9 matrix metallopeptidase 9 ISO RGD PMID:16465063 RGD:1582620 NCBI chr 2:17,867,267...17,874,757
Ensembl chr 2:17,867,177...17,874,712 		JBrowse link
G P MMP9 matrix metallopeptidase 9 ISO RGD PMID:16465063 RGD:1582620 NCBI chr17:48,179,690...48,186,782
Ensembl chr17:48,179,671...48,186,788 		JBrowse link
G S Mmp9 matrix metallopeptidase 9 ISO RGD PMID:16465063 RGD:1582620 NCBI chrNW_004936514:7,038,240...7,045,873
Ensembl chrNW_004936514:7,037,639...7,045,793 		JBrowse link
G D MMP9 matrix metallopeptidase 9 ISO RGD PMID:16465063 RGD:1582620 NCBI chr24:33,274,260...33,281,116
Ensembl chr24:33,274,268...33,281,293 		JBrowse link
G B MMP9 matrix metallopeptidase 9 ISO RGD PMID:16465063 RGD:1582620 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129 		JBrowse link
G C Mmp9 matrix metallopeptidase 9 ISO RGD PMID:16465063 RGD:1582620 NCBI chrNW_004955445:11,295,500...11,303,322
Ensembl chrNW_004955445:11,295,448...11,303,288 		JBrowse link
G R Mmp9 matrix metallopeptidase 9 ISO RGD PMID:16465063 RGD:1582620 NCBI chr 3:174,103,474...174,111,434
Ensembl chr 3:153,683,858...153,692,120 		JBrowse link
G M Mmp9 matrix metallopeptidase 9 ISO RGD PMID:16465063 RGD:1582620 NCBI chr 2:164,782,246...164,797,770
Ensembl chr 2:164,782,700...164,797,770 		JBrowse link
G H MMP9 matrix metallopeptidase 9 IDA RGD PMID:16465063 RGD:1582620 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561 		JBrowse link
G N Pecam1 platelet and endothelial cell adhesion molecule 1 ISO mRNA,protein:decreased expression:endothelium: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004624870:33,293...122,536 JBrowse link
G G PECAM1 platelet and endothelial cell adhesion molecule 1 ISO mRNA,protein:decreased expression:endothelium: RGD PMID:26808710 RGD:11529441 NCBI chr16:56,863,763...56,947,479
Ensembl chr16:56,880,934...56,950,999 		JBrowse link
G P PECAM1 platelet and endothelial cell adhesion molecule 1 ISO mRNA,protein:decreased expression:endothelium: RGD PMID:26808710 RGD:11529441 NCBI chr12:14,667,643...14,723,296
Ensembl chr12:14,649,044...14,723,293 		JBrowse link
G S Pecam1 platelet and endothelial cell adhesion molecule 1 ISO mRNA,protein:decreased expression:endothelium: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004936541:4,873,459...4,919,787
Ensembl chrNW_004936541:4,873,182...4,937,500 		JBrowse link
G D PECAM1 platelet and endothelial cell adhesion molecule 1 ISO mRNA,protein:decreased expression:endothelium: RGD PMID:26808710 RGD:11529441 NCBI chr 9:12,166,124...12,219,553
Ensembl chr 9:12,166,775...12,219,778 		JBrowse link
G B PECAM1 platelet and endothelial cell adhesion molecule 1 ISO mRNA,protein:decreased expression:endothelium: RGD PMID:26808710 RGD:11529441 NCBI chr17:58,417,134...58,526,409
Ensembl chr17:63,511,784...63,579,067 		JBrowse link
G C Pecam1 platelet and endothelial cell adhesion molecule 1 ISO mRNA,protein:decreased expression:endothelium: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004955478:7,448,584...7,531,860
Ensembl chrNW_004955478:7,478,492...7,531,188 		JBrowse link
G R Pecam1 platelet and endothelial cell adhesion molecule 1 ISO mRNA,protein:decreased expression:endothelium: RGD PMID:26808710 RGD:11529441 NCBI chr10:92,090,263...92,152,002
Ensembl chr10:91,590,521...91,652,116 		JBrowse link
G M Pecam1 platelet/endothelial cell adhesion molecule 1 ISO mRNA,protein:decreased expression:endothelium: RGD PMID:26808710 RGD:11529441 NCBI chr11:106,545,039...106,606,107
Ensembl chr11:106,545,043...106,641,454 		JBrowse link
G H PECAM1 platelet and endothelial cell adhesion molecule 1 IEP mRNA,protein:decreased expression:endothelium: RGD PMID:26808710 RGD:11529441 NCBI chr17:64,319,415...64,390,860
Ensembl chr17:64,319,415...64,413,776 		JBrowse link
G N Timp1 TIMP metallopeptidase inhibitor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chrNW_004624978:120,723...125,006
Ensembl chrNW_004624978:121,803...124,912 		JBrowse link
G G TIMP1 TIMP metallopeptidase inhibitor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059
G P TIMP1 TIMP metallopeptidase inhibitor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr  X:42,103,251...42,106,289
Ensembl chr  X:42,102,172...42,106,296 		JBrowse link
G S Timp1 TIMP metallopeptidase inhibitor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chrNW_004936502:13,345,936...13,350,170
Ensembl chrNW_004936502:13,345,832...13,350,248 		JBrowse link
G D TIMP1 TIMP metallopeptidase inhibitor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr  X:41,201,623...41,205,314
Ensembl chr  X:41,201,638...41,205,310 		JBrowse link
G B TIMP1 TIMP metallopeptidase inhibitor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr  X:40,018,190...40,022,636
Ensembl chr  X:47,914,906...47,919,419 		JBrowse link
G C Timp1 TIMP metallopeptidase inhibitor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chrNW_004955516:507,113...511,360
Ensembl chrNW_004955516:505,789...512,118 		JBrowse link
G R Timp1 TIMP metallopeptidase inhibitor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr  X:3,766,509...3,772,578
Ensembl chr  X:1,212,972...1,217,664 		JBrowse link
G M Timp1 tissue inhibitor of metalloproteinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr  X:20,736,524...20,740,972
Ensembl chr  X:20,736,405...20,740,974 		JBrowse link
G H TIMP1 TIMP metallopeptidase inhibitor 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr  X:47,582,436...47,586,789
Ensembl chr  X:47,582,408...47,586,789 		JBrowse link
G N Tnc tenascin C ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chrNW_004624760:20,044,900...20,137,260
Ensembl chrNW_004624760:20,044,826...20,137,616 		JBrowse link
G G TNC tenascin C ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr12:24,457,616...24,556,194
Ensembl chr12:24,457,738...24,556,451 		JBrowse link
G P TNC tenascin C ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 1:255,533,235...255,630,381
Ensembl chr 1:255,533,238...255,630,376 		JBrowse link
G S Tnc tenascin C ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chrNW_004936487:4,172,263...4,256,780
Ensembl chrNW_004936487:4,172,886...4,233,126 		JBrowse link
G D TNC tenascin C ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr11:69,077,532...69,169,673
Ensembl chr11:69,077,535...69,170,281 		JBrowse link
G B TNC tenascin C ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 9:86,125,672...86,222,804
Ensembl chr 9:114,486,778...114,584,299 		JBrowse link
G C Tnc tenascin C ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chrNW_004955419:12,569,620...12,662,897
Ensembl chrNW_004955419:12,569,547...12,662,958 		JBrowse link
G R Tnc tenascin C ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 5:82,391,340...82,476,197
Ensembl chr 5:77,375,851...77,460,624 		JBrowse link
G M Tnc tenascin C ISO CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 4:63,878,022...63,965,554
Ensembl chr 4:63,878,022...63,965,252 		JBrowse link
G H TNC tenascin C EXP CTD Direct Evidence: marker/mechanism CTD PMID:17643059 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,207 		JBrowse link
G N Vim vimentin ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004624796:10,624,672...10,632,300
Ensembl chrNW_004624796:10,623,929...10,632,600 		JBrowse link
G G VIM vimentin ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr 9:17,183,466...17,191,771
Ensembl chr 9:17,183,388...17,191,829 		JBrowse link
G P VIM vimentin ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170 		JBrowse link
G S Vim vimentin ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004936520:10,051,692...10,059,324
Ensembl chrNW_004936520:10,052,012...10,059,182 		JBrowse link
G D VIM vimentin ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr 2:19,671,316...19,679,367
Ensembl chr 2:19,671,316...19,679,466 		JBrowse link
G B VIM vimentin ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr10:17,546,389...17,554,702
Ensembl chr10:17,818,285...17,826,642 		JBrowse link
G C Vim vimentin ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chrNW_004955429:10,708,852...10,716,743
Ensembl chrNW_004955429:10,707,719...10,717,554 		JBrowse link
G R Vim vimentin ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr17:81,577,261...81,585,746
Ensembl chr17:76,668,647...76,677,187 		JBrowse link
G M Vim vimentin ISO mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr 2:13,579,122...13,587,637
Ensembl chr 2:13,578,738...13,587,637 		JBrowse link
G H VIM vimentin IEP mRNA,protein:increased expression:vein: RGD PMID:26808710 RGD:11529441 NCBI chr10:17,228,241...17,237,593
Ensembl chr10:17,228,241...17,237,593 		JBrowse link
hemorrhoid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G N Pon1 paraoxonase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19022366 NCBI chrNW_004624813:1,953,796...1,979,846
Ensembl chrNW_004624813:1,949,614...1,979,882 		JBrowse link
G G PON1 paraoxonase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19022366 NCBI chr21:53,713,434...53,739,658
Ensembl chr21:53,714,012...53,739,875 		JBrowse link
G P PON1 paraoxonase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19022366 NCBI chr 9:74,943,646...74,974,720
Ensembl chr 9:74,926,048...74,974,723 		JBrowse link
G S Pon1 paraoxonase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19022366 NCBI chrNW_004936585:4,954,871...4,979,560
Ensembl chrNW_004936585:4,954,869...4,979,591 		JBrowse link
G D PON1 paraoxonase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19022366 NCBI chr14:20,565,620...20,600,774
Ensembl chr14:20,565,641...20,642,985 		JBrowse link
G B PON1 paraoxonase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19022366 NCBI chr 7:87,253,476...87,279,650
Ensembl chr 7:100,841,286...100,867,493 		JBrowse link
G C Pon1 paraoxonase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19022366 NCBI chrNW_004955432:11,893,473...11,923,035
Ensembl chrNW_004955432:11,893,473...11,923,339 		JBrowse link
G R Pon1 paraoxonase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19022366 NCBI chr 4:34,261,312...34,292,327
Ensembl chr 4:33,294,722...33,321,360 		JBrowse link
G M Pon1 paraoxonase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19022366 NCBI chr 6:5,168,101...5,193,824
Ensembl chr 6:5,168,090...5,193,946 		JBrowse link
G H PON1 paraoxonase 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:19022366 NCBI chr 7:95,297,676...95,324,532
Ensembl chr 7:95,297,676...95,324,532 		JBrowse link
varicocele term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G M Casp3 caspase 3 ISO protein:increased expression:testis RGD PMID:19145435 RGD:2311432 NCBI chr 8:47,070,326...47,092,733
Ensembl chr 8:47,070,326...47,092,724 		JBrowse link
G H CASP3 caspase 3 ISO protein:increased expression:testis RGD PMID:19145435 RGD:2311432 NCBI chr 4:184,627,696...184,649,447
Ensembl chr 4:184,627,696...184,650,062 		JBrowse link
G N Casp9 caspase 9 ISO protein:increased expression:testis RGD PMID:19145435 RGD:2311432 NCBI chrNW_004624764:1,769,270...1,789,399
Ensembl chrNW_004624764:1,773,455...1,789,423 		JBrowse link
G G CASP9 caspase 9 ISO protein:increased expression:testis RGD PMID:19145435 RGD:2311432 NCBI chr20:116,772,819...116,798,402
Ensembl chr20:116,772,155...116,798,930 		JBrowse link
G P CASP9 caspase 9 ISO protein:increased expression:testis RGD PMID:19145435 RGD:2311432 NCBI chr 6:74,707,597...74,730,033
Ensembl chr 6:74,706,516...74,730,007 		JBrowse link
G S Casp9 caspase 9 ISO protein:increased expression:testis RGD PMID:19145435 RGD:2311432 NCBI chrNW_004936474:3,178,097...3,196,130 JBrowse link
G D CASP9 caspase 9 ISO protein:increased expression:testis RGD PMID:19145435 RGD:2311432 NCBI chr 2:82,033,759...82,076,710
Ensembl chr 2:82,031,563...82,090,484 		JBrowse link
G B CASP9 caspase 9 ISO protein:increased expression:testis RGD PMID:19145435 RGD:2311432 NCBI chr 1:14,630,659...14,662,865
Ensembl chr 1:15,624,666...15,656,266 		JBrowse link
G C Casp9 caspase 9 ISO protein:increased expression:testis RGD PMID:19145435 RGD:2311432 NCBI chrNW_004955527:2,613,691...2,630,217
Ensembl chrNW_004955527:2,613,683...2,629,738 		JBrowse link
G R Casp9 caspase 9 IEP protein:increased expression:testis RGD PMID:19145435 RGD:2311432 Ensembl chr 5:154,109,046...154,126,626 JBrowse link
G M Casp9 caspase 9 ISO protein:increased expression:testis RGD PMID:19145435 RGD:2311432 NCBI chr 4:141,520,923...141,543,289
Ensembl chr 4:141,520,923...141,543,287 		JBrowse link
G H CASP9 caspase 9 ISO protein:increased expression:testis RGD PMID:19145435 RGD:2311432 NCBI chr 1:15,491,401...15,524,912
Ensembl chr 1:15,490,832...15,526,534 		JBrowse link
G N Fas Fas cell surface death receptor ISO protein:decreased expression:Leydig cell, spermatid RGD PMID:16616089 RGD:1600348 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848 		JBrowse link
G P FAS Fas cell surface death receptor ISO protein:decreased expression:Leydig cell, spermatid RGD PMID:16616089 RGD:1600348 NCBI chr14:100,927,305...100,954,781
Ensembl chr14:100,927,089...100,956,716 		JBrowse link
G S Fas Fas cell surface death receptor ISO protein:decreased expression:Leydig cell, spermatid RGD PMID:16616089 RGD:1600348 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G D FAS Fas cell surface death receptor ISO protein:decreased expression:Leydig cell, spermatid RGD PMID:16616089 RGD:1600348 NCBI chr26:38,738,811...38,763,298
Ensembl chr26:38,737,611...38,763,321 		JBrowse link
G B FAS Fas cell surface death receptor ISO protein:decreased expression:Leydig cell, spermatid RGD PMID:16616089 RGD:1600348 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612 		JBrowse link
G C Fas Fas cell surface death receptor ISO protein:decreased expression:Leydig cell, spermatid RGD PMID:16616089 RGD:1600348 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455 		JBrowse link
G R Fas Fas cell surface death receptor IEP protein:decreased expression:Leydig cell, spermatid RGD PMID:16616089 RGD:1600348 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G M Fas Fas cell surface death receptor ISO protein:decreased expression:Leydig cell, spermatid RGD PMID:16616089 RGD:1600348 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172 		JBrowse link
G H FAS Fas cell surface death receptor ISO protein:decreased expression:Leydig cell, spermatid RGD PMID:16616089 RGD:1600348 NCBI chr10:88,964,050...89,017,059
Ensembl chr10:88,953,813...89,029,605 		JBrowse link
G N Hif1a hypoxia inducible factor 1 subunit alpha ISO protein:increased expression:epididymus (rat) RGD PMID:25095617 RGD:9068459 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705 		JBrowse link
G G HIF1A hypoxia inducible factor 1 subunit alpha ISO protein:increased expression:epididymus (rat) RGD PMID:25095617 RGD:9068459 NCBI chr24:38,873,830...38,927,657
Ensembl chr24:38,873,861...38,928,288 		JBrowse link
G P HIF1A hypoxia inducible factor 1 subunit alpha ISO protein:increased expression:epididymus (rat) RGD PMID:25095617 RGD:9068459 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G S Hif1a hypoxia inducible factor 1 subunit alpha ISO protein:increased expression:epididymus (rat) RGD PMID:25095617 RGD:9068459 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157 		JBrowse link
G D HIF1A hypoxia inducible factor 1 subunit alpha ISO protein:increased expression:epididymus (rat) RGD PMID:25095617 RGD:9068459 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692 		JBrowse link
G B HIF1A hypoxia inducible factor 1 subunit alpha ISO protein:increased expression:epididymus (rat) RGD PMID:25095617 RGD:9068459 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885 		JBrowse link
G C Hif1a hypoxia inducible factor 1 subunit alpha ISO protein:increased expression:epididymus (rat) RGD PMID:25095617 RGD:9068459 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497 		JBrowse link
G R Hif1a hypoxia inducible factor 1 subunit alpha IEP protein:increased expression:epididymus (rat) RGD PMID:25095617 RGD:9068459 NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G M Hif1a hypoxia inducible factor 1, alpha subunit ISO protein:increased expression:epididymus (rat) RGD PMID:25095617 RGD:9068459 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304 		JBrowse link
G H HIF1A hypoxia inducible factor 1 subunit alpha ISO protein:increased expression:epididymus (rat) RGD PMID:25095617 RGD:9068459 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259 		JBrowse link
G N Hmox1 heme oxygenase 1 severity ISO RGD PMID:15878918 RGD:1598403 NCBI chrNW_004624750:341,699...346,005
Ensembl chrNW_004624750:342,146...345,887 		JBrowse link
G G HMOX1 heme oxygenase 1 severity ISO RGD PMID:15878918 RGD:1598403 NCBI chr19:18,144,466...18,157,944
Ensembl chr19:18,144,545...18,157,971 		JBrowse link
G P HMOX1 heme oxygenase 1 severity ISO RGD PMID:15878918 RGD:1598403
G S Hmox1 heme oxygenase 1 severity ISO RGD PMID:15878918 RGD:1598403 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311 		JBrowse link
G D HMOX1 heme oxygenase 1 severity ISO RGD PMID:15878918 RGD:1598403 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773 		JBrowse link
G B HMOX1 heme oxygenase 1 severity ISO RGD PMID:15878918 RGD:1598403 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063 		JBrowse link
G C Hmox1 heme oxygenase 1 severity ISO RGD PMID:15878918 RGD:1598403 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979 		JBrowse link
G R Hmox1 heme oxygenase 1 severity ISO RGD PMID:15878918 RGD:1598403 NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,467,244...13,474,079 		JBrowse link
G M Hmox1 heme oxygenase 1 severity ISO RGD PMID:15878918 RGD:1598403 NCBI chr 8:75,820,246...75,827,221
Ensembl chr 8:75,820,249...75,827,217 		JBrowse link
G H HMOX1 heme oxygenase 1 severity IEP RGD PMID:15878918 RGD:1598403 NCBI chr22:35,381,096...35,394,207
Ensembl chr22:35,380,361...35,394,214 		JBrowse link
G N Hspd1 heat shock protein family D (Hsp60) member 1 ISO mRNA:increased expression:spermatid RGD PMID:15804863 RGD:1624240 NCBI chrNW_004624889:2,736,727...2,746,333 JBrowse link
G G HSPD1 heat shock protein family D (Hsp60) member 1 ISO mRNA:increased expression:spermatid RGD PMID:15804863 RGD:1624240 NCBI chr10:83,003,266...83,017,397
Ensembl chr10:83,003,717...83,017,363 		JBrowse link
G P HSPD1 heat shock protein family D (Hsp60) member 1 ISO mRNA:increased expression:spermatid RGD PMID:15804863 RGD:1624240 NCBI chr15:101,360,355...101,373,498
Ensembl chr15:101,360,094...101,373,526 		JBrowse link
G S Hspd1 heat shock protein family D (Hsp60) member 1 ISO mRNA:increased expression:spermatid RGD PMID:15804863 RGD:1624240 NCBI chrNW_004936506:1,678,069...1,687,632 JBrowse link
G D HSPD1 heat shock protein family D (Hsp60) member 1 ISO mRNA:increased expression:spermatid RGD PMID:15804863 RGD:1624240 NCBI chr37:7,010,421...7,025,912 JBrowse link
G B HSPD1 heat shock protein family D (Hsp60) member 1 ISO mRNA:increased expression:spermatid RGD PMID:15804863 RGD:1624240 NCBI chr2B:84,729,615...84,743,352
Ensembl chr2B:202,623,497...202,636,959 		JBrowse link
G C Hspd1 heat shock protein family D (Hsp60) member 1 ISO mRNA:increased expression:spermatid RGD PMID:15804863 RGD:1624240 NCBI chrNW_004955403:3,062,724...3,073,419
Ensembl chrNW_004955403:3,063,133...3,073,419 		JBrowse link
G R Hspd1 heat shock protein family D (Hsp60) member 1 IEP mRNA:increased expression:spermatid RGD PMID:15804863 RGD:1624240 NCBI chr 9:64,073,610...64,084,332
Ensembl chr 9:56,579,201...56,589,662 		JBrowse link
G M Hspd1 heat shock protein 1 (chaperonin) ISO mRNA:increased expression:spermatid RGD PMID:15804863 RGD:1624240 NCBI chr 1:55,116,992...55,127,402
Ensembl chr 1:55,116,994...55,127,402 		JBrowse link
G H HSPD1 heat shock protein family D (Hsp60) member 1 ISO mRNA:increased expression:spermatid RGD PMID:15804863 RGD:1624240 NCBI chr 2:197,486,584...197,500,274
Ensembl chr 2:197,486,584...197,516,737 		JBrowse link
G N Il1a interleukin 1 alpha ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chrNW_004624749:12,795,967...12,805,658
Ensembl chrNW_004624749:12,795,946...12,805,154 		JBrowse link
G G IL1A interleukin 1 alpha ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr14:15,789,710...15,801,938
Ensembl chr14:15,789,013...15,796,611 		JBrowse link
G P IL1A interleukin 1 alpha ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr 3:43,718,320...43,731,668
Ensembl chr 3:43,718,368...43,731,121 		JBrowse link
G S Il1a interleukin 1 alpha ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chrNW_004936783:1,210,715...1,218,315
Ensembl chrNW_004936783:1,210,809...1,218,315 		JBrowse link
G D IL1A interleukin 1 alpha ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr17:36,969,581...36,979,445
Ensembl chr17:36,970,573...36,979,435 		JBrowse link
G B IL1A interleukin 1 alpha ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr2A:89,273,482...89,284,421
Ensembl chr2A:113,784,854...113,795,801 		JBrowse link
G C Il1a interleukin 1 alpha ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chrNW_004955470:1,527,710...1,538,418
Ensembl chrNW_004955470:1,527,674...1,538,466 		JBrowse link
G R Il1a interleukin 1 alpha IEP protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr 3:136,979,804...136,990,236
Ensembl chr 3:116,526,604...116,536,822 		JBrowse link
G M Il1a interleukin 1 alpha ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr 2:129,141,530...129,151,892
Ensembl chr 2:129,141,530...129,151,892 		JBrowse link
G H IL1A interleukin 1 alpha ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr 2:112,773,925...112,784,493
Ensembl chr 2:112,773,925...112,784,493 		JBrowse link
G N Il1b interleukin 1 beta ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chrNW_004624749:12,852,128...12,858,478
Ensembl chrNW_004624749:12,852,021...12,858,760 		JBrowse link
G G IL1B interleukin 1 beta ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr14:15,844,628...15,852,652
Ensembl chr14:15,844,672...15,850,729 		JBrowse link
G S Il1b interleukin 1 beta ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165 		JBrowse link
G D IL1B interleukin 1 beta ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr17:37,019,329...37,033,388
Ensembl chr17:37,019,329...37,024,458 		JBrowse link
G B IL1B interleukin 1 beta ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424 		JBrowse link
G C Il1b interleukin 1 beta ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G R Il1b interleukin 1 beta IEP protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G M Il1b interleukin 1 beta ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr 2:129,206,490...129,213,059
Ensembl chr 2:129,206,490...129,213,059 		JBrowse link
G H IL1B interleukin 1 beta ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094 NCBI chr 2:112,829,751...112,836,779
Ensembl chr 2:112,829,751...112,836,816 		JBrowse link
G P LOC110258578 interleukin-1 beta-like ISO protein:increased expression:testis RGD PMID:16616101 RGD:2311094
G N Pdcd10 programmed cell death 10 ISO protein:increased expression:testis (rat) RGD PMID:19647235 RGD:401827162 NCBI chrNW_004624730:45,653,470...45,698,461
Ensembl chrNW_004624730:45,654,022...45,678,745 		JBrowse link
G G PDCD10 programmed cell death 10 ISO protein:increased expression:testis (rat) RGD PMID:19647235 RGD:401827162 NCBI chr15:21,697,366...21,748,760
Ensembl chr15:21,706,675...21,749,470 		JBrowse link
G P PDCD10 programmed cell death 10 ISO protein:increased expression:testis (rat) RGD PMID:19647235 RGD:401827162 NCBI chr13:106,517,408...106,558,959
Ensembl chr13:106,517,432...106,558,895 		JBrowse link
G S Pdcd10 programmed cell death 10 ISO protein:increased expression:testis (rat) RGD PMID:19647235 RGD:401827162 NCBI chrNW_004936593:4,650,624...4,693,387
Ensembl chrNW_004936593:4,651,114...4,692,534 		JBrowse link
G D PDCD10 programmed cell death 10 ISO protein:increased expression:testis (rat) RGD PMID:19647235 RGD:401827162 NCBI chr34:32,512,109...32,553,524
Ensembl chr34:32,512,112...32,553,445 		JBrowse link
G B PDCD10 programmed cell death 10 ISO protein:increased expression:testis (rat) RGD PMID:19647235 RGD:401827162 NCBI chr 3:164,703,909...164,755,085
Ensembl chr 3:172,760,923...172,811,430 		JBrowse link
G C Pdcd10 programmed cell death 10 ISO protein:increased expression:testis (rat) RGD PMID:19647235 RGD:401827162 NCBI chrNW_004955448:16,866,577...16,887,215
Ensembl chrNW_004955448:16,864,031...16,887,626 		JBrowse link
G R Pdcd10 programmed cell death 10 IEP protein:increased expression:testis (rat) RGD PMID:19647235 RGD:401827162 NCBI chr 2:162,602,516...162,644,690
Ensembl chr 2:160,303,449...160,346,018 		JBrowse link
G M Pdcd10 programmed cell death 10 ISO protein:increased expression:testis (rat) RGD PMID:19647235 RGD:401827162 NCBI chr 3:75,423,797...75,464,159
Ensembl chr 3:75,423,797...75,464,163 		JBrowse link
G H PDCD10 programmed cell death 10 ISO protein:increased expression:testis (rat) RGD PMID:19647235 RGD:401827162 NCBI chr 3:167,683,298...167,734,892
Ensembl chr 3:167,683,298...167,734,939 		JBrowse link
Varicose Ulcer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G N Esr1 estrogen receptor 1 no_association ISO DNA:polymorphism:(TA) dinucleotide repeat RGD PMID:16153823 RGD:1626508 NCBI chrNW_004624785:6,164,507...6,601,302
Ensembl chrNW_004624785:6,164,379...6,601,326 		JBrowse link
G G ESR1 estrogen receptor 1 no_association ISO DNA:polymorphism:(TA) dinucleotide repeat RGD PMID:16153823 RGD:1626508 NCBI chr13:79,153,418...79,554,552
Ensembl chr13:79,270,265...79,554,549 		JBrowse link
G P ESR1 estrogen receptor 1 no_association ISO DNA:polymorphism:(TA) dinucleotide repeat RGD PMID:16153823 RGD:1626508 NCBI chr 1:14,217,032...14,604,906
Ensembl chr 1:14,217,036...14,493,363 		JBrowse link
G S Esr1 estrogen receptor 1 no_association ISO DNA:polymorphism:(TA) dinucleotide repeat RGD PMID:16153823 RGD:1626508 NCBI chrNW_004936489:4,616,839...4,887,179
Ensembl chrNW_004936489:4,614,754...4,887,171 		JBrowse link
G D ESR1 estrogen receptor 1 no_association ISO DNA:polymorphism:(TA) dinucleotide repeat RGD PMID:16153823 RGD:1626508 NCBI chr 1:42,081,952...42,368,544
Ensembl chr 1:42,081,969...42,368,544 		JBrowse link
G B ESR1 estrogen receptor 1 no_association ISO DNA:polymorphism:(TA) dinucleotide repeat RGD PMID:16153823 RGD:1626508 NCBI chr 6:149,507,599...149,918,523
Ensembl chr 6:154,317,002...154,631,551 		JBrowse link
G C Esr1 estrogen receptor 1 no_association ISO DNA:polymorphism:(TA) dinucleotide repeat RGD PMID:16153823 RGD:1626508 NCBI chrNW_004955439:9,588,631...9,953,606
Ensembl chrNW_004955439:9,588,201...9,963,353 		JBrowse link
G R Esr1 estrogen receptor 1 no_association ISO RGD PMID:16153823 RGD:1626508 NCBI chr 1:43,511,685...43,904,454
Ensembl chr 1:41,210,475...41,495,002 		JBrowse link
G M Esr1 estrogen receptor 1 (alpha) no_association ISO RGD PMID:16153823 RGD:1626508 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614 		JBrowse link
G H ESR1 estrogen receptor 1 no_association IAGP DNA:polymorphism:(TA) dinucleotide repeat RGD PMID:16153823 RGD:1626508 NCBI chr 6:151,656,672...152,129,619
Ensembl chr 6:151,656,691...152,129,619 		JBrowse link
G N Esr2 estrogen receptor 2 ISO DNA:SNPs:promoter, exon
DNA:polymorphism:intron:(CA) dinucleotide repeat (human)		 RGD PMID:16153823 PMID:18070128 RGD:1626508 RGD:8553061 NCBI chrNW_004624734:36,742,913...36,862,993
Ensembl chrNW_004624734:36,759,104...36,825,295 		JBrowse link
G G ESR2 estrogen receptor 2 ISO DNA:polymorphism:intron:(CA) dinucleotide repeat (human)
DNA:SNPs:promoter, exon		 RGD PMID:16153823 PMID:18070128 RGD:1626508 RGD:8553061 NCBI chr24:41,426,333...41,513,802
Ensembl chr24:41,447,224...41,512,486 		JBrowse link
G P ESR2 estrogen receptor 2 ISO DNA:polymorphism:intron:(CA) dinucleotide repeat (human)
DNA:SNPs:promoter, exon		 RGD PMID:16153823 PMID:18070128 RGD:1626508 RGD:8553061 NCBI chr 1:193,823,666...193,907,330
Ensembl chr 1:193,829,560...193,906,565 		JBrowse link
G S Esr2 estrogen receptor 2 ISO DNA:SNPs:promoter, exon
DNA:polymorphism:intron:(CA) dinucleotide repeat (human)		 RGD PMID:16153823 PMID:18070128 RGD:1626508 RGD:8553061 NCBI chrNW_004936495:7,956,168...8,018,356
Ensembl chrNW_004936495:7,956,766...8,004,357 		JBrowse link
G D ESR2 estrogen receptor 2 ISO DNA:polymorphism:intron:(CA) dinucleotide repeat (human)
DNA:SNPs:promoter, exon		 RGD PMID:16153823 PMID:18070128 RGD:1626508 RGD:8553061 NCBI chr 8:38,645,917...38,715,347
Ensembl chr 8:38,645,430...38,702,691 		JBrowse link
G B ESR2 estrogen receptor 2 ISO DNA:polymorphism:intron:(CA) dinucleotide repeat (human)
DNA:SNPs:promoter, exon		 RGD PMID:16153823 PMID:18070128 RGD:1626508 RGD:8553061 NCBI chr14:44,807,875...44,919,780
Ensembl chr14:63,064,402...63,131,303 		JBrowse link
G C Esr2 estrogen receptor 2 ISO DNA:SNPs:promoter, exon
DNA:polymorphism:intron:(CA) dinucleotide repeat (human)		 RGD PMID:16153823 PMID:18070128 RGD:1626508 RGD:8553061 NCBI chrNW_004955466:5,587,003...5,644,765
Ensembl chrNW_004955466:5,575,088...5,638,946 		JBrowse link
G R Esr2 estrogen receptor 2 ISO DNA:polymorphism:intron:(CA) dinucleotide repeat (human)
DNA:SNPs:promoter, exon		 RGD PMID:16153823 PMID:18070128 RGD:1626508, RGD:8553061 NCBI chr 6:100,589,553...100,645,240
Ensembl chr 6:94,809,547...94,908,919 		JBrowse link
G M Esr2 estrogen receptor 2 (beta) ISO DNA:polymorphism:intron:(CA) dinucleotide repeat (human)
DNA:SNPs:promoter, exon		 RGD PMID:16153823 PMID:18070128 RGD:1626508, RGD:8553061 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033 		JBrowse link
G H ESR2 estrogen receptor 2 IAGP DNA:polymorphism:intron:(CA) dinucleotide repeat (human)
DNA:SNPs:promoter, exon		 RGD PMID:16153823 PMID:18070128 RGD:1626508, RGD:8553061 NCBI chr14:64,226,707...64,338,613
Ensembl chr14:64,084,232...64,338,112 		JBrowse link
G N Hfe homeostatic iron regulator susceptibility
onset		 ISO associated with Chronic Venous Disease;DNA:missense mutation:cds:p.C282Y (human)
associated with Chronic Venous Disease;DNA:missense mutation:cds:p.H63D (human)		 RGD PMID:16102632 PMID:16678024 RGD:1582685 RGD:8694379 NCBI chrNW_004624756:821,738...831,482
Ensembl chrNW_004624756:823,947...831,376 		JBrowse link
G G HFE homeostatic iron regulator onset
susceptibility		 ISO associated with Chronic Venous Disease;DNA:missense mutation:cds:p.H63D (human)
associated with Chronic Venous Disease;DNA:missense mutation:cds:p.C282Y (human)		 RGD PMID:16102632 PMID:16678024 RGD:1582685 RGD:8694379 NCBI chr17:46,159,770...46,168,831
Ensembl chr17:46,156,685...46,164,649 		JBrowse link
G P HFE homeostatic iron regulator susceptibility
onset		 ISO associated with Chronic Venous Disease;DNA:missense mutation:cds:p.C282Y (human)
associated with Chronic Venous Disease;DNA:missense mutation:cds:p.H63D (human)		 RGD PMID:16102632 PMID:16678024 RGD:1582685 RGD:8694379 NCBI chr 7:20,758,604...20,767,004
Ensembl chr 7:20,758,741...20,767,000 		JBrowse link
G S Hfe homeostatic iron regulator onset
susceptibility		 ISO associated with Chronic Venous Disease;DNA:missense mutation:cds:p.H63D (human)
associated with Chronic Venous Disease;DNA:missense mutation:cds:p.C282Y (human)		 RGD PMID:16102632 PMID:16678024 RGD:1582685 RGD:8694379 NCBI chrNW_004936671:1,940,079...1,947,574
Ensembl chrNW_004936671:1,940,101...1,947,580 		JBrowse link
G D HFE homeostatic iron regulator susceptibility
onset		 ISO associated with Chronic Venous Disease;DNA:missense mutation:cds:p.C282Y (human)
associated with Chronic Venous Disease;DNA:missense mutation:cds:p.H63D (human)		 RGD PMID:16102632 PMID:16678024 RGD:1582685 RGD:8694379 NCBI chr35:24,031,479...24,038,922
Ensembl chr35:24,031,387...24,042,413 		JBrowse link
G B HFE homeostatic iron regulator susceptibility
onset		 ISO associated with Chronic Venous Disease;DNA:missense mutation:cds:p.C282Y (human)
associated with Chronic Venous Disease;DNA:missense mutation:cds:p.H63D (human)		 RGD PMID:16102632 PMID:16678024 RGD:1582685 RGD:8694379 NCBI chr 6:25,921,663...25,930,852
Ensembl chr 6:26,580,358...26,588,591 		JBrowse link
G C Hfe homeostatic iron regulator susceptibility
onset		 ISO associated with Chronic Venous Disease;DNA:missense mutation:cds:p.C282Y (human)
associated with Chronic Venous Disease;DNA:missense mutation:cds:p.H63D (human)		 RGD PMID:16102632 PMID:16678024 RGD:1582685 RGD:8694379 NCBI chrNW_004955483:933,269...941,070
Ensembl chrNW_004955483:932,352...941,143 		JBrowse link
G R Hfe homeostatic iron regulator susceptibility
onset		 ISO associated with Chronic Venous Disease;DNA:missense mutation:cds:p.C282Y (human)
associated with Chronic Venous Disease;DNA:missense mutation:cds:p.H63D (human)		 RGD PMID:16102632 PMID:16678024 RGD:1582685, RGD:8694379 NCBI chr17:41,841,302...41,849,359
Ensembl chr17:41,413,451...41,421,502 		JBrowse link
G M Hfe homeostatic iron regulator susceptibility
onset		 ISO associated with Chronic Venous Disease;DNA:missense mutation:cds:p.C282Y (human)
associated with Chronic Venous Disease;DNA:missense mutation:cds:p.H63D (human)		 RGD PMID:16102632 PMID:16678024 RGD:1582685, RGD:8694379 NCBI chr13:23,886,017...23,894,837
Ensembl chr13:23,886,017...23,894,837 		JBrowse link
G H HFE homeostatic iron regulator susceptibility
onset		 IAGP associated with Chronic Venous Disease;DNA:missense mutation:cds:p.C282Y (human)
associated with Chronic Venous Disease;DNA:missense mutation:cds:p.H63D (human)		 RGD PMID:16102632 PMID:16678024 RGD:1582685, RGD:8694379 NCBI chr 6:26,087,429...26,098,343
Ensembl chr 6:26,087,226...26,098,343 		JBrowse link
G N Lepr leptin receptor ISO mRNA:decreased expression:skin RGD PMID:22773832 RGD:10412021 NCBI chrNW_004624742:29,221,742...29,313,273
Ensembl chrNW_004624742:29,223,392...29,337,049 		JBrowse link
G G LEPR leptin receptor ISO mRNA:decreased expression:skin RGD PMID:22773832 RGD:10412021 NCBI chr20:67,454,205...67,567,524
Ensembl chr20:67,454,334...67,524,229 		JBrowse link
G P LEPR leptin receptor ISO mRNA:decreased expression:skin RGD PMID:22773832 RGD:10412021 NCBI chr 6:146,802,297...146,896,152
Ensembl chr 6:146,801,954...146,895,995 		JBrowse link
G S Lepr leptin receptor ISO mRNA:decreased expression:skin RGD PMID:22773832 RGD:10412021 NCBI chrNW_004936591:5,771,371...5,846,177
Ensembl chrNW_004936591:5,774,326...5,836,444 		JBrowse link
G D LEPR leptin receptor ISO mRNA:decreased expression:skin RGD PMID:22773832 RGD:10412021 NCBI chr 5:44,684,118...44,775,626
Ensembl chr 5:44,688,109...44,775,636 		JBrowse link
G B LEPR leptin receptor ISO mRNA:decreased expression:skin RGD PMID:22773832 RGD:10412021 NCBI chr 1:64,772,612...64,881,886
Ensembl chr 1:66,693,926...66,764,768 		JBrowse link
G C Lepr leptin receptor ISO mRNA:decreased expression:skin RGD PMID:22773832 RGD:10412021 NCBI chrNW_004955423:25,108,897...25,185,315
Ensembl chrNW_004955423:25,111,266...25,185,407 		JBrowse link
G R Lepr leptin receptor ISO mRNA:decreased expression:skin RGD PMID:22773832 RGD:10412021 NCBI chr 5:121,409,735...121,593,201
Ensembl chr 5:116,289,823...116,475,908 		JBrowse link
G M Lepr leptin receptor ISO mRNA:decreased expression:skin RGD PMID:22773832 RGD:10412021 NCBI chr 4:101,574,393...101,676,375
Ensembl chr 4:101,574,601...101,672,549 		JBrowse link
G H LEPR leptin receptor IEP mRNA:decreased expression:skin RGD PMID:22773832 RGD:10412021 NCBI chr 1:65,420,652...65,641,559
Ensembl chr 1:65,420,652...65,641,559 		JBrowse link
G D MBL1 mannose binding lectin 1 ISO protein:decreased expression:serum: RGD PMID:19997692 RGD:8694068 NCBI chr 4:29,419,886...29,424,377 JBrowse link
G N Mbl2 mannose binding lectin 2 ISO protein:decreased expression:serum: RGD PMID:19997692 RGD:8694068 NCBI chrNW_004624791:10,881,319...10,886,294
Ensembl chrNW_004624791:10,881,268...10,886,297 		JBrowse link
G G MBL2 mannose binding lectin 2 ISO protein:decreased expression:serum: RGD PMID:19997692 RGD:8694068 NCBI chr 9:78,389,534...78,394,753
Ensembl chr 9:78,389,947...78,396,079 		JBrowse link
G P MBL2 mannose binding lectin 2 ISO protein:decreased expression:serum: RGD PMID:19997692 RGD:8694068 NCBI chr14:97,103,926...97,107,635
Ensembl chr14:97,102,823...97,108,083 		JBrowse link
G B MBL2 mannose binding lectin 2 ISO protein:decreased expression:serum: RGD PMID:19997692 RGD:8694068 NCBI chr10:49,401,364...49,409,328
Ensembl chr10:51,527,758...51,543,432 		JBrowse link
G C Mbl2 mannose binding lectin 2 ISO protein:decreased expression:serum: RGD PMID:19997692 RGD:8694068 NCBI chrNW_004955425:7,704,371...7,708,951
Ensembl chrNW_004955425:7,702,137...7,709,006 		JBrowse link
G R Mbl2 mannose binding lectin 2 ISO protein:decreased expression:serum: RGD PMID:19997692 RGD:8694068 NCBI chr 1:237,429,873...237,465,567 JBrowse link
G M Mbl2 mannose-binding lectin (protein C) 2 ISO protein:decreased expression:serum: RGD PMID:19997692 RGD:8694068 NCBI chr19:30,210,306...30,217,087
Ensembl chr19:30,210,342...30,217,087 		JBrowse link
G H MBL2 mannose binding lectin 2 IEP protein:decreased expression:serum: RGD PMID:19997692 RGD:8694068 NCBI chr10:52,765,380...52,772,784
Ensembl chr10:52,765,380...52,772,784 		JBrowse link
G P MIR21 microRNA mir-21 ISO miRNA:increased expression:skin: RGD PMID:22773832 RGD:10412021 NCBI chr12:36,065,267...36,065,358
Ensembl chr12:36,065,267...36,065,358 		JBrowse link
G D MIR21 microRNA mir-21 ISO miRNA:increased expression:skin: RGD PMID:22773832 RGD:10412021 NCBI chr 9:34,340,550...34,340,609
Ensembl chr 9:34,340,533...34,340,624 		JBrowse link
G R Mir21 microRNA 21 ISO miRNA:increased expression:skin: RGD PMID:22773832 RGD:10412021 NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348 		JBrowse link
G H MIR21 microRNA 21 IEP miRNA:increased expression:skin: RGD PMID:22773832 RGD:10412021 NCBI chr17:59,841,266...59,841,337
Ensembl chr17:59,841,266...59,841,337 		JBrowse link
G M Mir21a microRNA 21a ISO miRNA:increased expression:skin: RGD PMID:22773832 RGD:10412021 NCBI chr11:86,474,893...86,474,984
Ensembl chr11:86,474,893...86,474,984 		JBrowse link
Term paths to the root
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Term Annotations click to browse term
  disease 288179
    disease of anatomical entity 271815
      cardiovascular system disease 60635
        vascular disease 42874
          vein disease 1406
            varicose veins 382
              Colonic Varices without Portal Hypertension 0
              Varicose Ulcer 54
              pelvic varices + 198
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