ESR1 (estrogen receptor 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: ESR1 (estrogen receptor 1) Sus scrofa
Analyze
Symbol: ESR1
Name: estrogen receptor 1
RGD ID: 14008284
Description: ENCODES a protein that exhibits calmodulin binding (ortholog); DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); antral ovarian follicle growth (ortholog); baculum development (ortholog); PARTICIPATES IN bisphenol A response pathway; estrogen signaling pathway; follicle-stimulating hormone signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); Animal Disease Models (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); perikaryon (ortholog); INTERACTS WITH 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: ER; ER-alpha; estradiol receptor; estrogen receptor; estrogen receptor alpha; nuclear receptor subfamily 3 group A member 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl114,217,036 - 14,493,363 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1114,217,032 - 14,604,906 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2116,546,666 - 16,577,163 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
adenocarcinoma  (ISO)
Alzheimer's disease  (ISO)
Animal Disease Models  (ISO)
Animal Mammary Neoplasms  (ISO)
arteriosclerosis  (ISO)
arthrogryposis multiplex congenita-3  (ISO)
atherosclerosis  (ISO)
autosomal dominant Emery-Dreifuss muscular dystrophy 4  (ISO)
autosomal recessive spinocerebellar ataxia 8  (ISO)
bone disease  (ISO)
Bone Fractures  (ISO)
breast cancer  (ISO)
Breast Cancer, Familial  (ISO)
breast carcinoma  (ISO)
Breast Neoplasms  (ISO)
Bronchial Hyperreactivity  (ISO)
carcinoma  (ISO)
cataract 33  (ISO)
cerebellar ataxia  (ISO)
chromosome 6q24-q25 deletion syndrome  (ISO)
Chronic Periodontitis  (ISO)
coronary artery disease  (ISO)
cryptorchidism  (ISO)
Diabetic Nephropathies  (ISO)
Disease Progression  (ISO)
Emery-Dreifuss muscular dystrophy  (ISO)
Endometrial Neoplasms  (ISO)
Endometrioid Carcinomas  (ISO)
endometriosis  (ISO)
Estrogen Resistance  (ISO)
Experimental Arthritis  (ISO)
Experimental Diabetes Mellitus  (ISO)
Experimental Liver Neoplasms  (ISO)
Experimental Mammary Neoplasms  (ISO)
Female Infertility  (ISO)
Female Urogenital Diseases  (ISO)
Feminization  (ISO)
Genetic Predisposition to Disease  (ISO)
glomerulonephritis  (ISO)
Hand Osteoarthritis  (ISO)
Hemorrhagic Shock  (ISO)
hepatocellular carcinoma  (ISO)
Hyperalgesia  (ISO)
idiopathic pulmonary fibrosis  (ISO)
in situ carcinoma  (ISO)
infertility  (ISO)
Knee Osteoarthritis  (ISO)
leiomyoma  (ISO)
leukemia  (ISO)
Leydig cell tumor  (ISO)
Liver Neoplasms  (ISO)
Lung Neoplasms  (ISO)
lung non-small cell carcinoma  (ISO)
lymphangioleiomyomatosis  (ISO)
macular degeneration  (ISO)
male infertility  (ISO)
malignant astrocytoma  (ISO)
melanoma  (ISO)
Mesothelioma  (ISO)
Metabolic Bone Diseases  (ISO)
migraine  (ISO)
mitochondrial metabolism disease  (ISO)
Musculoskeletal Pain  (ISO)
myocardial infarction  (ISO)
Myocardial Reperfusion Injury  (ISO)
Neoplasm Invasiveness  (ISO)
Neoplasm Metastasis  (ISO)
Neoplasm Recurrence, Local  (ISO)
Neoplastic Cell Transformation  (ISO)
neuroblastoma  (ISO)
obesity  (ISO)
oligospermia  (ISO)
osteoarthritis  (ISO)
Osteoarthritis, Hip  (ISO)
osteoporosis  (ISO)
Osteoporotic Fractures  (ISO)
ovarian cancer  (ISO)
Parkinsonism  (ISO)
peritonitis  (ISO)
pleurisy  (ISO)
Postmenopausal Osteoporosis  (ISO)
prostate cancer  (ISO)
prostate carcinoma in situ  (ISO)
prostatic hypertrophy  (ISO)
Prostatic Neoplasms  (ISO)
pulmonary hypertension  (ISO)
Spinal Cord Injuries  (ISO)
Spinal Fractures  (ISO)
sporadic breast cancer  (ISO)
Subarachnoid Hemorrhage  (ISO)
substance-induced psychosis  (ISO)
systemic scleroderma  (ISO)
transient cerebral ischemia  (ISO)
type 2 diabetes mellitus  (ISO)
urinary bladder cancer  (ISO)
Urination Disorders  (ISO)
Varicose Ulcer  (ISO)
vitiligo  (ISO)
Vulvar Lichen Sclerosus  (ISO)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
androgen metabolic process  (IEA,ISO)
antral ovarian follicle growth  (IEA,ISO)
baculum development  (ISO)
cellular response to estradiol stimulus  (IEA,ISS)
cellular response to estrogen stimulus  (IBA,IEA,ISO)
cellular response to wortmannin  (ISO)
decidualization  (ISO)
epithelial cell development  (IEA,ISO)
epithelial cell proliferation involved in mammary gland duct elongation  (IEA,ISO)
estrogen receptor signaling pathway  (IBA,IEA)
fibroblast proliferation  (IEA,ISO)
male gonad development  (IEA,ISO)
mammary gland alveolus development  (IEA,ISO)
mammary gland branching involved in pregnancy  (IEA,ISO)
negative regulation of canonical NF-kappaB signal transduction  (IEA,ISS)
negative regulation of D-glucose import  (ISO)
negative regulation of DNA-binding transcription factor activity  (ISS)
negative regulation of gene expression  (IEA)
negative regulation of miRNA transcription  (IEA)
negative regulation of neuron apoptotic process  (ISO)
negative regulation of smooth muscle cell apoptotic process  (ISS)
negative regulation of smooth muscle cell proliferation  (ISO)
negative regulation of transcription by RNA polymerase II  (IEA)
negative regulation of triglyceride metabolic process  (ISO)
nuclear receptor-mediated steroid hormone signaling pathway  (ISO,ISS)
osteoblast development  (ISO)
phospholipase C-activating G protein-coupled receptor signaling pathway  (ISS)
positive regulation of cytosolic calcium ion concentration  (ISS)
positive regulation of DNA-binding transcription factor activity  (ISS)
positive regulation of DNA-templated transcription  (IEA,ISS)
positive regulation of epidermal growth factor receptor signaling pathway  (ISO)
positive regulation of epithelial cell proliferation  (ISO)
positive regulation of ERK1 and ERK2 cascade  (ISO)
positive regulation of fibroblast proliferation  (IEA,ISO)
positive regulation of nitric oxide biosynthetic process  (ISS)
positive regulation of nitric-oxide synthase activity  (ISS)
positive regulation of transcription by RNA polymerase II  (IEA,ISO)
prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis  (IEA,ISO)
prostate epithelial cord elongation  (IEA,ISO)
protein localization to chromatin  (IEA)
regulation of branching involved in prostate gland morphogenesis  (IEA,ISO)
regulation of DNA-templated transcription  (IEA,ISO)
regulation of epithelial cell apoptotic process  (IEA,ISO)
regulation of inflammatory response  (IEA,ISO)
regulation of toll-like receptor signaling pathway  (IEA,ISO)
regulation of transcription by RNA polymerase II  (IBA)
response to estradiol  (IEA,ISO)
response to estrogen  (IEA)
RNA polymerase II preinitiation complex assembly  (IEA)
Sertoli cell development  (ISO)
Sertoli cell proliferation  (ISO)
stem cell differentiation  (IEA)
steroid hormone receptor signaling pathway  (IEA)
transcription by RNA polymerase II  (IEA,ISO)
uterus development  (IEA,ISO)
vagina development  (IEA,ISO)

Cellular Component

References
Additional References at PubMed
PMID:7635163   PMID:7988744   PMID:8458437   PMID:15943697   PMID:16249893   PMID:16897031   PMID:17306201   PMID:17470727   PMID:17553131   PMID:18547755   PMID:19645857   PMID:20466637  
PMID:20576168   PMID:21944540   PMID:22301074   PMID:30178695   PMID:33977374   PMID:34248262  


Genomics

Comparative Map Data
ESR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl114,217,036 - 14,493,363 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1114,217,032 - 14,604,906 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2116,546,666 - 16,577,163 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ESR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386151,656,672 - 152,129,619 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6151,656,691 - 152,129,619 (+)EnsemblGRCh38hg38GRCh38
GRCh376151,977,807 - 152,450,754 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366152,170,379 - 152,466,099 (+)NCBINCBI36Build 36hg18NCBI36
Build 346152,220,799 - 152,516,520NCBI
Celera6152,745,469 - 153,158,143 (+)NCBICelera
Cytogenetic Map6q25.1-q25.2NCBI
HuRef6149,573,851 - 149,986,188 (+)NCBIHuRef
CHM1_16152,275,698 - 152,688,511 (+)NCBICHM1_1
T2T-CHM13v2.06152,857,871 - 153,330,911 (+)NCBIT2T-CHM13v2.0
Esr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39104,561,989 - 4,955,633 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl104,561,593 - 4,955,614 (+)EnsemblGRCm39 Ensembl
GRCm38104,611,989 - 5,005,633 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl104,611,593 - 5,005,614 (+)EnsemblGRCm38mm10GRCm38
MGSCv37105,342,780 - 5,734,495 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36105,342,780 - 5,734,495 (-)NCBIMGSCv36mm8
Celera104,553,702 - 4,949,051 (+)NCBICelera
Cytogenetic Map10A1NCBI
cM Map102.03NCBI
Esr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8143,511,685 - 43,904,454 (+)NCBIGRCr8
mRatBN7.2141,106,335 - 41,499,104 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl141,210,475 - 41,495,002 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx141,764,020 - 42,022,224 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0147,751,203 - 48,009,419 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0141,839,517 - 42,097,729 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0141,192,029 - 41,594,799 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl141,192,824 - 41,594,796 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0142,534,049 - 42,935,434 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4135,523,680 - 35,759,891 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1135,526,624 - 35,762,826NCBI
Celera136,921,417 - 37,175,762 (+)NCBICelera
Cytogenetic Map1q11NCBI
Esr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554399,588,201 - 9,963,353 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554399,588,631 - 9,953,606 (-)NCBIChiLan1.0ChiLan1.0
ESR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25171,714,055 - 172,130,308 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16169,722,942 - 170,016,810 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06149,507,599 - 149,918,523 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16154,200,521 - 154,635,806 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6154,317,002 - 154,631,551 (+)Ensemblpanpan1.1panPan2
ESR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1142,081,952 - 42,368,544 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl142,081,969 - 42,368,544 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha142,923,315 - 43,207,109 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0142,267,417 - 42,551,842 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl142,267,396 - 42,570,184 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1142,140,418 - 42,417,150 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0141,990,600 - 42,280,338 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0142,491,321 - 42,775,607 (+)NCBIUU_Cfam_GSD_1.0
Esr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946137,259,082 - 137,635,196 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364894,614,754 - 4,887,171 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364894,616,839 - 4,887,179 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ESR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11379,153,418 - 79,554,552 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1379,270,265 - 79,554,549 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604051,453,078 - 51,888,098 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Esr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247856,164,379 - 6,601,326 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247856,164,507 - 6,601,302 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ESR1
11583 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_214220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF035775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ849540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ849541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ849542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ849543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU694923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ307204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF195769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01071660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LT594966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X98008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z37167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSSCT00000004517   ⟹   ENSSSCP00000004415
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl114,416,335 - 14,491,382 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000024477   ⟹   ENSSSCP00000026750
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl114,219,716 - 14,493,363 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000035147   ⟹   ENSSSCP00000030835
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl114,217,036 - 14,491,628 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000063430   ⟹   ENSSSCP00000039928
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl114,217,036 - 14,491,628 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000079800   ⟹   ENSSSCP00000074152
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl114,217,036 - 14,491,165 (-)Ensembl
RefSeq Acc Id: NM_214220   ⟹   NP_999385
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,221,334 - 14,491,165 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083002   ⟹   XP_020938661
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,219,484 - 14,494,055 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083009   ⟹   XP_020938668
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,219,484 - 14,491,700 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083012   ⟹   XP_020938671
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,219,484 - 14,495,040 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083018   ⟹   XP_020938677
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,219,484 - 14,604,906 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083026   ⟹   XP_020938685
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,219,484 - 14,568,142 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083031   ⟹   XP_020938690
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,219,484 - 14,493,235 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083034   ⟹   XP_020938693
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,219,484 - 14,604,906 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083041   ⟹   XP_020938700
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,219,484 - 14,491,700 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083045   ⟹   XP_020938704
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,219,484 - 14,491,551 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083050   ⟹   XP_020938709
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,219,484 - 14,604,906 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083057   ⟹   XP_020938716
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,217,032 - 14,491,165 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083061   ⟹   XP_020938720
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,219,484 - 14,494,053 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083070   ⟹   XP_020938729
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,217,042 - 14,491,741 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083075   ⟹   XP_020938734
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1114,219,484 - 14,491,897 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_999385 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938661 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938668 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938671 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938677 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938685 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938690 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938693 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938700 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938704 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938709 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938716 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938720 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938729 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938734 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAB88509 (Get FASTA)   NCBI Sequence Viewer  
  ABC60028 (Get FASTA)   NCBI Sequence Viewer  
  ABM88718 (Get FASTA)   NCBI Sequence Viewer  
  CAA85524 (Get FASTA)   NCBI Sequence Viewer  
  CAH61066 (Get FASTA)   NCBI Sequence Viewer  
  CAH61067 (Get FASTA)   NCBI Sequence Viewer  
  CAH61068 (Get FASTA)   NCBI Sequence Viewer  
  CAH61069 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000004415.5
  ENSSSCP00000026750
  ENSSSCP00000026750.3
  ENSSSCP00000030835
  ENSSSCP00000030835.2
  ENSSSCP00000039928
  ENSSSCP00000039928.2
  ENSSSCP00000074152.1
  ENSSSCP00005022972.1
  ENSSSCP00015013732.1
  ENSSSCP00025025914.1
  ENSSSCP00025025975.1
  ENSSSCP00025026015.1
  ENSSSCP00025026062.1
  ENSSSCP00030041735.1
  ENSSSCP00030041745.1
  ENSSSCP00030041758.1
  ENSSSCP00030041786.1
  ENSSSCP00030041829.1
  ENSSSCP00035003640.1
  ENSSSCP00035003643.1
  ENSSSCP00035003658.1
  ENSSSCP00035003661.1
  ENSSSCP00040038757.1
  ENSSSCP00040038877.1
  ENSSSCP00040039053.1
  ENSSSCP00040039156.1
  ENSSSCP00045043938.1
  ENSSSCP00045043993.1
  ENSSSCP00045044042.1
  ENSSSCP00045044072.1
  ENSSSCP00045044101.1
  ENSSSCP00045044124.1
  ENSSSCP00045044162.1
  ENSSSCP00045044196.1
  ENSSSCP00045044227.1
  ENSSSCP00045044268.1
  ENSSSCP00050044052.1
  ENSSSCP00050044055.1
  ENSSSCP00050044056.1
  ENSSSCP00050044057.1
  ENSSSCP00055026013.1
  ENSSSCP00055026060.1
  ENSSSCP00055026114.1
  ENSSSCP00055026163.1
  ENSSSCP00055026202.1
  ENSSSCP00055026257.1
  ENSSSCP00055026310.1
  ENSSSCP00060025643.1
  ENSSSCP00060025649.1
  ENSSSCP00060025652.1
  ENSSSCP00060025653.1
  ENSSSCP00065026015.1
  ENSSSCP00065026019.1
  ENSSSCP00065026039.1
  ENSSSCP00065026047.1
  ENSSSCP00070044411.1
  ENSSSCP00070044420.1
  ENSSSCP00070044421.1
  ENSSSCP00070044422.1
  ENSSSCP00070044423.1
  ENSSSCP00070044424.1
  ENSSSCP00070044425.1
GenBank Protein Q29040 (Get FASTA)   NCBI Sequence Viewer  
  SBU12236 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_020938716   ⟸   XM_021083057
- Peptide Label: isoform X1
- UniProtKB: A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938729   ⟸   XM_021083070
- Peptide Label: isoform X2
- UniProtKB: Q29040 (UniProtKB/Swiss-Prot),   A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938709   ⟸   XM_021083050
- Peptide Label: isoform X1
- UniProtKB: A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938693   ⟸   XM_021083034
- Peptide Label: isoform X1
- UniProtKB: A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938677   ⟸   XM_021083018
- Peptide Label: isoform X1
- UniProtKB: A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938685   ⟸   XM_021083026
- Peptide Label: isoform X1
- UniProtKB: A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938671   ⟸   XM_021083012
- Peptide Label: isoform X1
- UniProtKB: A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938661   ⟸   XM_021083002
- Peptide Label: isoform X1
- UniProtKB: A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938720   ⟸   XM_021083061
- Peptide Label: isoform X2
- UniProtKB: Q29040 (UniProtKB/Swiss-Prot),   A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938690   ⟸   XM_021083031
- Peptide Label: isoform X1
- UniProtKB: A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938734   ⟸   XM_021083075
- Peptide Label: isoform X2
- UniProtKB: Q29040 (UniProtKB/Swiss-Prot),   A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938668   ⟸   XM_021083009
- Peptide Label: isoform X1
- UniProtKB: A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938700   ⟸   XM_021083041
- Peptide Label: isoform X1
- UniProtKB: A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938704   ⟸   XM_021083045
- Peptide Label: isoform X1
- UniProtKB: A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_999385   ⟸   NM_214220
- UniProtKB: Q29040 (UniProtKB/Swiss-Prot),   A2TEV4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000026750   ⟸   ENSSSCT00000024477
Ensembl Acc Id: ENSSSCP00000074152   ⟸   ENSSSCT00000079800
Ensembl Acc Id: ENSSSCP00000030835   ⟸   ENSSSCT00000035147
Ensembl Acc Id: ENSSSCP00000004415   ⟸   ENSSSCT00000004517
Ensembl Acc Id: ENSSSCP00000039928   ⟸   ENSSSCT00000063430
Protein Domains
Estrogen receptor N-terminal   NR LBD   Nuclear receptor   Oestrogen-type nuclear receptor final C-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000025777 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00005023723 UniProtKB/TrEMBL
  ENSSSCG00015025934 UniProtKB/TrEMBL
  ENSSSCG00025044932 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00030064727 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00035008571 UniProtKB/TrEMBL
  ENSSSCG00040064377 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00045036259 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00050074040 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00055016487 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00060044136 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00065043873 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00070026197 UniProtKB/TrEMBL
  ENSSSCG00070026203 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000004517.6 UniProtKB/TrEMBL
  ENSSSCT00000024477 ENTREZGENE
  ENSSSCT00000024477.3 UniProtKB/TrEMBL
  ENSSSCT00000035147 ENTREZGENE
  ENSSSCT00000035147.2 UniProtKB/Swiss-Prot
  ENSSSCT00000063430 ENTREZGENE
  ENSSSCT00000063430.2 UniProtKB/TrEMBL
  ENSSSCT00000079800.1 UniProtKB/TrEMBL
  ENSSSCT00005037527.1 UniProtKB/TrEMBL
  ENSSSCT00015034668.1 UniProtKB/TrEMBL
  ENSSSCT00025061031.1 UniProtKB/Swiss-Prot
  ENSSSCT00025061170.1 UniProtKB/TrEMBL
  ENSSSCT00025061257.1 UniProtKB/TrEMBL
  ENSSSCT00025061377.1 UniProtKB/TrEMBL
  ENSSSCT00030090594.1 UniProtKB/Swiss-Prot
  ENSSSCT00030090626.1 UniProtKB/TrEMBL
  ENSSSCT00030090665.1 UniProtKB/TrEMBL
  ENSSSCT00030090738.1 UniProtKB/TrEMBL
  ENSSSCT00030090854.1 UniProtKB/TrEMBL
  ENSSSCT00035010709.1 UniProtKB/TrEMBL
  ENSSSCT00035010716.1 UniProtKB/TrEMBL
  ENSSSCT00035010741.1 UniProtKB/TrEMBL
  ENSSSCT00035010745.1 UniProtKB/TrEMBL
  ENSSSCT00040088178.1 UniProtKB/Swiss-Prot
  ENSSSCT00040088457.1 UniProtKB/TrEMBL
  ENSSSCT00040088856.1 UniProtKB/TrEMBL
  ENSSSCT00040089085.1 UniProtKB/TrEMBL
  ENSSSCT00045062399.1 UniProtKB/Swiss-Prot
  ENSSSCT00045062461.1 UniProtKB/TrEMBL
  ENSSSCT00045062520.1 UniProtKB/TrEMBL
  ENSSSCT00045062557.1 UniProtKB/TrEMBL
  ENSSSCT00045062590.1 UniProtKB/TrEMBL
  ENSSSCT00045062618.1 UniProtKB/TrEMBL
  ENSSSCT00045062673.1 UniProtKB/TrEMBL
  ENSSSCT00045062728.1 UniProtKB/TrEMBL
  ENSSSCT00045062767.1 UniProtKB/TrEMBL
  ENSSSCT00045062822.1 UniProtKB/TrEMBL
  ENSSSCT00050101312.1 UniProtKB/TrEMBL
  ENSSSCT00050101315.1 UniProtKB/Swiss-Prot
  ENSSSCT00050101317.1 UniProtKB/TrEMBL
  ENSSSCT00050101318.1 UniProtKB/TrEMBL
  ENSSSCT00055032656.1 UniProtKB/Swiss-Prot
  ENSSSCT00055032714.1 UniProtKB/TrEMBL
  ENSSSCT00055032784.1 UniProtKB/TrEMBL
  ENSSSCT00055032843.1 UniProtKB/TrEMBL
  ENSSSCT00055032892.1 UniProtKB/TrEMBL
  ENSSSCT00055032965.1 UniProtKB/TrEMBL
  ENSSSCT00055033038.1 UniProtKB/TrEMBL
  ENSSSCT00060059851.1 UniProtKB/TrEMBL
  ENSSSCT00060059864.1 UniProtKB/Swiss-Prot
  ENSSSCT00060059872.1 UniProtKB/TrEMBL
  ENSSSCT00060059880.1 UniProtKB/TrEMBL
  ENSSSCT00065060008.1 UniProtKB/TrEMBL
  ENSSSCT00065060029.1 UniProtKB/Swiss-Prot
  ENSSSCT00065060057.1 UniProtKB/TrEMBL
  ENSSSCT00065060068.1 UniProtKB/TrEMBL
  ENSSSCT00070052468.1 UniProtKB/TrEMBL
  ENSSSCT00070052480.1 UniProtKB/Swiss-Prot
  ENSSSCT00070052481.1 UniProtKB/Swiss-Prot
  ENSSSCT00070052482.1 UniProtKB/Swiss-Prot
  ENSSSCT00070052483.1 UniProtKB/Swiss-Prot
  ENSSSCT00070052484.1 UniProtKB/TrEMBL
  ENSSSCT00070052485.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.565.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.50.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CCDC170-like UniProtKB/TrEMBL
  Estr_rcpt_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NHR-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_hormone_rcpt_NR3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Oest_rcpt/oest-rel_rcp UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Oestr_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Oestrogen-typ_rcpt_final_C_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_NHR/GATA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:397435 UniProtKB/Swiss-Prot
NCBI Gene ESR1 ENTREZGENE
PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 170 UniProtKB/TrEMBL
  ESTROGEN RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KNIRPS-RELATED PROTEIN-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR18863 UniProtKB/TrEMBL
Pfam ESR1_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Hormone_recep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Oest_recep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PIRSF ER-a UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ER-like_NR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS OESTROGENR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STRDHORMONER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STROIDFINGER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HOLI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48508 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1A9C8I5_PIG UniProtKB/TrEMBL
  A0A288CG40_PIG UniProtKB/TrEMBL
  A0A4X1VLL4_PIG UniProtKB/TrEMBL
  A0A4X1VLM6_PIG UniProtKB/TrEMBL
  A0A4X1VQR4_PIG UniProtKB/TrEMBL
  A0A5G2RAX2_PIG UniProtKB/TrEMBL
  A0A5S6HFY3_PIG UniProtKB/TrEMBL
  A0A5S8LAU6_PIG UniProtKB/TrEMBL
  A0A8D0J7E3_PIG UniProtKB/TrEMBL
  A0A8D0N9Y7_PIG UniProtKB/TrEMBL
  A0A8D0XTE4_PIG UniProtKB/TrEMBL
  A0A8D0YKN0_PIG UniProtKB/TrEMBL
  A0A8D0YL32_PIG UniProtKB/TrEMBL
  A0A8D1J487_PIG UniProtKB/TrEMBL
  A0A8D1J7C2_PIG UniProtKB/TrEMBL
  A0A8D1L9E3_PIG UniProtKB/TrEMBL
  A0A8D1QTT6_PIG UniProtKB/TrEMBL
  A0A8D1QU94_PIG UniProtKB/TrEMBL
  A0A8D1VM21_PIG UniProtKB/TrEMBL
  A2TEV4 ENTREZGENE, UniProtKB/TrEMBL
  D9UC10_PIG UniProtKB/TrEMBL
  ESR1_PIG UniProtKB/Swiss-Prot, ENTREZGENE
  Q5ZES1_PIG UniProtKB/TrEMBL
UniProt Secondary F6Q158 UniProtKB/TrEMBL
VGNC ID VGNC:103089 ENTREZGENE