TNC (tenascin C) - Rat Genome Database

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Gene: TNC (tenascin C) Sus scrofa
Analyze
Symbol: TNC
Name: tenascin C
RGD ID: 14238184
Description: ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN bud outgrowth involved in lung branching (ortholog); cellular response to prostaglandin D stimulus (ortholog); cellular response to retinoic acid (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH allergic conjunctivitis (ortholog); asbestosis (ortholog); asthma (ortholog); FOUND IN basement membrane (inferred); collagen-containing extracellular matrix (inferred); extracellular region (inferred); INTERACTS WITH 4-methylumbelliferone; bis(2-chloroethyl) sulfide; deoxynivalenol
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: cytotactin; glioma-associated-extracellular matrix antigen; GMEM; GP 150-225; hexabrachion; HXB; JI; myotendinous antigen; neuronectin; P230; tenascin; TN
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1255,533,238 - 255,630,376 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11255,533,235 - 255,630,381 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21286,732,751 - 286,813,962 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap1q21.1-q21.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:1722152   PMID:7530615   PMID:7538362   PMID:9498558   PMID:14681463   PMID:15123658   PMID:17145712   PMID:21530096   PMID:22261194   PMID:22301074   PMID:23882691  


Genomics

Comparative Map Data
TNC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1255,533,238 - 255,630,376 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11255,533,235 - 255,630,381 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21286,732,751 - 286,813,962 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap1q21.1-q21.3NCBI
TNC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389115,019,575 - 115,118,157 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9115,019,575 - 115,118,207 (-)EnsemblGRCh38hg38GRCh38
GRCh379117,781,854 - 117,880,436 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369116,822,626 - 116,920,307 (-)NCBINCBI36Build 36hg18NCBI36
Build 349114,862,366 - 114,959,993NCBI
Celera988,430,273 - 88,527,747 (-)NCBICelera
Cytogenetic Map9q33.1NCBI
HuRef987,386,539 - 87,484,951 (-)NCBIHuRef
CHM1_19117,928,574 - 118,027,020 (-)NCBICHM1_1
T2T-CHM13v2.09127,212,162 - 127,310,465 (-)NCBIT2T-CHM13v2.0
Tnc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39463,878,022 - 63,965,554 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl463,878,022 - 63,965,252 (-)EnsemblGRCm39 Ensembl
GRCm38463,959,785 - 64,047,015 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl463,959,785 - 64,047,015 (-)EnsemblGRCm38mm10GRCm38
MGSCv37463,620,819 - 63,681,760 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36463,446,149 - 63,507,087 (-)NCBIMGSCv36mm8
Celera462,620,454 - 62,681,423 (-)NCBICelera
Cytogenetic Map4C1NCBI
cM Map434.06NCBI
Tnc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8582,391,340 - 82,476,197 (-)NCBIGRCr8
mRatBN7.2577,375,851 - 77,460,712 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl577,375,851 - 77,460,624 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx579,772,326 - 79,857,198 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0581,589,535 - 81,674,415 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0581,565,002 - 81,649,884 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0579,789,686 - 79,874,555 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl579,789,671 - 79,874,671 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0583,890,952 - 83,950,462 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera576,306,295 - 76,365,869 (-)NCBICelera
Cytogenetic Map5q24NCBI
Tnc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541912,569,547 - 12,662,958 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541912,569,620 - 12,662,897 (+)NCBIChiLan1.0ChiLan1.0
TNC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21124,252,394 - 24,349,633 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1924,254,811 - 24,351,994 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0986,125,672 - 86,222,804 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19114,486,778 - 114,584,297 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9114,486,778 - 114,584,299 (-)Ensemblpanpan1.1panPan2
TNC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11169,077,532 - 69,169,673 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1169,077,535 - 69,170,281 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1167,478,996 - 67,543,867 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01170,201,293 - 70,293,471 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1170,201,298 - 70,293,416 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11168,715,128 - 68,780,124 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01168,756,416 - 68,820,385 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01169,487,404 - 69,552,684 (-)NCBIUU_Cfam_GSD_1.0
Tnc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947184,403,727 - 184,487,858 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364874,172,886 - 4,233,126 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364874,172,263 - 4,256,780 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TNC
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11224,457,616 - 24,556,194 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1224,457,738 - 24,556,451 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603518,276,825 - 18,375,675 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tnc
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476020,044,826 - 20,137,616 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476020,044,900 - 20,137,260 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TNC
2886 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 4 2 1 4 4 1
Low 6 2 2 1 2 19 2 2 1
Below cutoff 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_214230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_021083193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK394849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU407235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU466939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01040321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X61599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSSSCT00000006041   ⟹   ENSSSCP00000005891
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,243 - 255,630,376 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000023943   ⟹   ENSSSCP00000024361
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,243 - 255,630,376 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000026819   ⟹   ENSSSCP00000027784
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,238 - 255,630,375 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000032138   ⟹   ENSSSCP00000022200
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,238 - 255,630,375 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000036896   ⟹   ENSSSCP00000044523
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,243 - 255,630,376 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000037131   ⟹   ENSSSCP00000034078
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,244 - 255,630,209 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000037550   ⟹   ENSSSCP00000043968
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,238 - 255,630,375 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000041382   ⟹   ENSSSCP00000047909
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,238 - 255,630,375 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000058254   ⟹   ENSSSCP00000059023
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,238 - 255,630,375 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000062234   ⟹   ENSSSCP00000058621
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1255,533,238 - 255,630,375 (-)Ensembl
RefSeq Acc Id: NM_214230   ⟹   NP_999395
RefSeq Status: VALIDATED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,550 - 255,630,111 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083096   ⟹   XP_020938755
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,341 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083107   ⟹   XP_020938766
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,370 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083117   ⟹   XP_020938776
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,338 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083120   ⟹   XP_020938779
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,336 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083130   ⟹   XP_020938789
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,371 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083140   ⟹   XP_020938799
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,331 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083143   ⟹   XP_020938802
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,334 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083146   ⟹   XP_020938805
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,376 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083154   ⟹   XP_020938813
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,334 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083159   ⟹   XP_020938818
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,331 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083166   ⟹   XP_020938825
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,329 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083169   ⟹   XP_020938828
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,328 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083172   ⟹   XP_020938831
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,329 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083176   ⟹   XP_020938835
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,328 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083179   ⟹   XP_020938838
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,326 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083182   ⟹   XP_020938841
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,329 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083188   ⟹   XP_020938847
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,318 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083193   ⟹   XP_020938852
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11255,533,235 - 255,630,381 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_999395 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938755 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938766 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938776 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938779 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938789 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938799 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938802 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938805 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938813 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938818 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938825 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938828 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938831 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938835 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938838 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938841 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938847 (Get FASTA)   NCBI Sequence Viewer  
  XP_020938852 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein CAA43796 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000005891
  ENSSSCP00000005891.5
  ENSSSCP00000022200
  ENSSSCP00000022200.4
  ENSSSCP00000024361.4
  ENSSSCP00000027784
  ENSSSCP00000027784.3
  ENSSSCP00000034078.2
  ENSSSCP00000043968
  ENSSSCP00000043968.3
  ENSSSCP00000044523
  ENSSSCP00000044523.1
  ENSSSCP00000047909
  ENSSSCP00000047909.2
  ENSSSCP00000058621.2
  ENSSSCP00000059023
  ENSSSCP00000059023.2
  ENSSSCP00015020617.1
  ENSSSCP00015020735.1
  ENSSSCP00015023447.1
  ENSSSCP00015023497.1
  ENSSSCP00015023629.1
  ENSSSCP00015023674.1
  ENSSSCP00015023953.1
  ENSSSCP00015023997.1
  ENSSSCP00015024082.1
  ENSSSCP00030033456.1
  ENSSSCP00030033499.1
  ENSSSCP00030033573.1
  ENSSSCP00030033617.1
  ENSSSCP00030033670.1
  ENSSSCP00030033700.1
  ENSSSCP00030033727.1
  ENSSSCP00030033763.1
  ENSSSCP00030033806.1
  ENSSSCP00030033829.1
  ENSSSCP00035021473.1
  ENSSSCP00035021476.1
  ENSSSCP00035021506.1
  ENSSSCP00035021510.1
  ENSSSCP00035021515.1
  ENSSSCP00035021520.1
  ENSSSCP00035021536.1
  ENSSSCP00035021543.1
  ENSSSCP00035021555.1
  ENSSSCP00035021566.1
  ENSSSCP00040046451.1
  ENSSSCP00040046627.1
  ENSSSCP00040046755.1
  ENSSSCP00040046781.1
  ENSSSCP00040046809.1
  ENSSSCP00040046960.1
  ENSSSCP00040046986.1
  ENSSSCP00040047024.1
  ENSSSCP00040047067.1
  ENSSSCP00040047101.1
  ENSSSCP00045039264.1
  ENSSSCP00045039662.1
  ENSSSCP00045039831.1
  ENSSSCP00045040012.1
  ENSSSCP00045040207.1
  ENSSSCP00050013609.1
  ENSSSCP00055031692.1
  ENSSSCP00055031920.1
  ENSSSCP00055033993.1
  ENSSSCP00055034197.1
  ENSSSCP00055034532.1
  ENSSSCP00055034716.1
  ENSSSCP00055035159.1
  ENSSSCP00055035338.1
  ENSSSCP00055035678.1
  ENSSSCP00070034052.1
  ENSSSCP00070034057.1
  ENSSSCP00070034081.1
  ENSSSCP00070034090.1
  ENSSSCP00070034094.1
  ENSSSCP00070034100.1
  ENSSSCP00070034137.1
  ENSSSCP00070034151.1
  ENSSSCP00070034167.1
  ENSSSCP00070034191.1
GenBank Protein Q29116 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_020938852   ⟸   XM_021083193
- Peptide Label: isoform X18
- UniProtKB: A0A8D1J3Q8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938805   ⟸   XM_021083146
- Peptide Label: isoform X8
- UniProtKB: A0A8D0ZSZ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938789   ⟸   XM_021083130
- Peptide Label: isoform X5
- UniProtKB: A0A287AKU7 (UniProtKB/TrEMBL),   A0A8D0ZT49 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938766   ⟸   XM_021083107
- Peptide Label: isoform X2
- UniProtKB: A0A8D0ZYS3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938755   ⟸   XM_021083096
- Peptide Label: isoform X1
- UniProtKB: A0A8D0ZYS3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938776   ⟸   XM_021083117
- Peptide Label: isoform X3
- UniProtKB: A0A8D1LTU4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938779   ⟸   XM_021083120
- Peptide Label: isoform X4
- UniProtKB: A0A8D0ZT49 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938813   ⟸   XM_021083154
- Peptide Label: isoform X9
- UniProtKB: A0A8D0ZT49 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938802   ⟸   XM_021083143
- Peptide Label: isoform X7
- UniProtKB: A0A8D0ZT49 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938818   ⟸   XM_021083159
- Peptide Label: isoform X10
- UniProtKB: A0A8D1IVJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938799   ⟸   XM_021083140
- Peptide Label: isoform X6
- UniProtKB: A0A8D0ZSZ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938831   ⟸   XM_021083172
- Peptide Label: isoform X13
- UniProtKB: A0A8D1L6G9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938841   ⟸   XM_021083182
- Peptide Label: isoform X16
- UniProtKB: A0A287AVF2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938825   ⟸   XM_021083166
- Peptide Label: isoform X11
- UniProtKB: A0A8D1L6G9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938835   ⟸   XM_021083176
- Peptide Label: isoform X14
- UniProtKB: A0A8D1J5G6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938828   ⟸   XM_021083169
- Peptide Label: isoform X12
- UniProtKB: A0A8D1J5G6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938838   ⟸   XM_021083179
- Peptide Label: isoform X15
- UniProtKB: A0A8D1ITS2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020938847   ⟸   XM_021083188
- Peptide Label: isoform X17
- UniProtKB: A0A8D1J3Q8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_999395   ⟸   NM_214230
- Peptide Label: precursor
- UniProtKB: Q29116 (UniProtKB/Swiss-Prot),   P98142 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSSSCP00000059023   ⟸   ENSSSCT00000058254
RefSeq Acc Id: ENSSSCP00000047909   ⟸   ENSSSCT00000041382
RefSeq Acc Id: ENSSSCP00000027784   ⟸   ENSSSCT00000026819
RefSeq Acc Id: ENSSSCP00000005891   ⟸   ENSSSCT00000006041
RefSeq Acc Id: ENSSSCP00000034078   ⟸   ENSSSCT00000037131
RefSeq Acc Id: ENSSSCP00000058621   ⟸   ENSSSCT00000062234
RefSeq Acc Id: ENSSSCP00000043968   ⟸   ENSSSCT00000037550
RefSeq Acc Id: ENSSSCP00000044523   ⟸   ENSSSCT00000036896
RefSeq Acc Id: ENSSSCP00000022200   ⟸   ENSSSCT00000032138
RefSeq Acc Id: ENSSSCP00000024361   ⟸   ENSSSCT00000023943

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000005494 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015032706 UniProtKB/TrEMBL
  ENSSSCG00030052527 UniProtKB/TrEMBL
  ENSSSCG00035040219 UniProtKB/TrEMBL
  ENSSSCG00040072704 UniProtKB/TrEMBL
  ENSSSCG00045020810 UniProtKB/TrEMBL
  ENSSSCG00050023519 UniProtKB/TrEMBL
  ENSSSCG00055019346 UniProtKB/TrEMBL
  ENSSSCG00070020327 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000006041 ENTREZGENE
  ENSSSCT00000006041.5 UniProtKB/TrEMBL
  ENSSSCT00000023943.4 UniProtKB/TrEMBL
  ENSSSCT00000026819 ENTREZGENE
  ENSSSCT00000026819.4 UniProtKB/TrEMBL
  ENSSSCT00000032138 ENTREZGENE
  ENSSSCT00000032138.4 UniProtKB/TrEMBL
  ENSSSCT00000036896 ENTREZGENE
  ENSSSCT00000036896.3 UniProtKB/TrEMBL
  ENSSSCT00000037131.3 UniProtKB/TrEMBL
  ENSSSCT00000037550 ENTREZGENE
  ENSSSCT00000037550.3 UniProtKB/TrEMBL
  ENSSSCT00000041382 ENTREZGENE
  ENSSSCT00000041382.3 UniProtKB/TrEMBL
  ENSSSCT00000058254 ENTREZGENE
  ENSSSCT00000058254.3 UniProtKB/TrEMBL
  ENSSSCT00000062234.3 UniProtKB/TrEMBL
  ENSSSCT00015051707.1 UniProtKB/TrEMBL
  ENSSSCT00015051967.1 UniProtKB/TrEMBL
  ENSSSCT00015058480.1 UniProtKB/TrEMBL
  ENSSSCT00015058596.1 UniProtKB/TrEMBL
  ENSSSCT00015058854.1 UniProtKB/TrEMBL
  ENSSSCT00015058930.1 UniProtKB/TrEMBL
  ENSSSCT00015059569.1 UniProtKB/TrEMBL
  ENSSSCT00015059656.1 UniProtKB/TrEMBL
  ENSSSCT00015059826.1 UniProtKB/TrEMBL
  ENSSSCT00030073226.1 UniProtKB/TrEMBL
  ENSSSCT00030073301.1 UniProtKB/TrEMBL
  ENSSSCT00030073414.1 UniProtKB/TrEMBL
  ENSSSCT00030073489.1 UniProtKB/TrEMBL
  ENSSSCT00030073579.1 UniProtKB/TrEMBL
  ENSSSCT00030073634.1 UniProtKB/TrEMBL
  ENSSSCT00030073684.1 UniProtKB/TrEMBL
  ENSSSCT00030073749.1 UniProtKB/TrEMBL
  ENSSSCT00030073826.1 UniProtKB/TrEMBL
  ENSSSCT00030073881.1 UniProtKB/TrEMBL
  ENSSSCT00035053406.1 UniProtKB/TrEMBL
  ENSSSCT00035053414.1 UniProtKB/TrEMBL
  ENSSSCT00035053467.1 UniProtKB/TrEMBL
  ENSSSCT00035053474.1 UniProtKB/TrEMBL
  ENSSSCT00035053483.1 UniProtKB/TrEMBL
  ENSSSCT00035053493.1 UniProtKB/TrEMBL
  ENSSSCT00035053527.1 UniProtKB/TrEMBL
  ENSSSCT00035053538.1 UniProtKB/TrEMBL
  ENSSSCT00035053554.1 UniProtKB/TrEMBL
  ENSSSCT00035053581.1 UniProtKB/TrEMBL
  ENSSSCT00040102714.1 UniProtKB/TrEMBL
  ENSSSCT00040103049.1 UniProtKB/TrEMBL
  ENSSSCT00040103265.1 UniProtKB/TrEMBL
  ENSSSCT00040103304.1 UniProtKB/TrEMBL
  ENSSSCT00040103342.1 UniProtKB/TrEMBL
  ENSSSCT00040103546.1 UniProtKB/TrEMBL
  ENSSSCT00040103574.1 UniProtKB/TrEMBL
  ENSSSCT00040103622.1 UniProtKB/TrEMBL
  ENSSSCT00040103672.1 UniProtKB/TrEMBL
  ENSSSCT00040103714.1 UniProtKB/TrEMBL
  ENSSSCT00045056281.1 UniProtKB/TrEMBL
  ENSSSCT00045056777.1 UniProtKB/TrEMBL
  ENSSSCT00045057003.1 UniProtKB/TrEMBL
  ENSSSCT00045057240.1 UniProtKB/TrEMBL
  ENSSSCT00045057491.1 UniProtKB/TrEMBL
  ENSSSCT00050032635.1 UniProtKB/TrEMBL
  ENSSSCT00055039857.1 UniProtKB/TrEMBL
  ENSSSCT00055040119.1 UniProtKB/TrEMBL
  ENSSSCT00055042719.1 UniProtKB/TrEMBL
  ENSSSCT00055042984.1 UniProtKB/TrEMBL
  ENSSSCT00055043396.1 UniProtKB/TrEMBL
  ENSSSCT00055043607.1 UniProtKB/TrEMBL
  ENSSSCT00055044146.1 UniProtKB/TrEMBL
  ENSSSCT00055044348.1 UniProtKB/TrEMBL
  ENSSSCT00055044776.1 UniProtKB/TrEMBL
  ENSSSCT00070040584.1 UniProtKB/TrEMBL
  ENSSSCT00070040590.1 UniProtKB/TrEMBL
  ENSSSCT00070040620.1 UniProtKB/TrEMBL
  ENSSSCT00070040630.1 UniProtKB/TrEMBL
  ENSSSCT00070040634.1 UniProtKB/TrEMBL
  ENSSSCT00070040640.1 UniProtKB/TrEMBL
  ENSSSCT00070040679.1 UniProtKB/TrEMBL
  ENSSSCT00070040697.1 UniProtKB/TrEMBL
  ENSSSCT00070040717.1 UniProtKB/TrEMBL
  ENSSSCT00070040746.1 UniProtKB/TrEMBL
Gene3D-CATH 2.20.25.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.90.215.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Laminin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro EGF-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EGF_extracell UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EGF_Tenascin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fibrinogen-like_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fibrinogen_a/b/g_C_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fibrinogen_a/b/g_C_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:397460 UniProtKB/Swiss-Prot
NCBI Gene TNC ENTREZGENE
PANTHER PTHR46708:SF1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TENASCIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam EGF_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EGF_Tenascin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fibrinogen_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  fn3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE EGF_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EGF_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EGF_3 UniProtKB/Swiss-Prot
  FIBRINOGEN_C_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART EGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FBG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF49265 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF56496 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A286ZR70_PIG UniProtKB/TrEMBL
  A0A287AIY5_PIG UniProtKB/TrEMBL
  A0A287AKU7 ENTREZGENE, UniProtKB/TrEMBL
  A0A287AVF2 ENTREZGENE, UniProtKB/TrEMBL
  A0A287BQB6_PIG UniProtKB/TrEMBL
  A0A287BR78_PIG UniProtKB/TrEMBL
  A0A4X1UVE5_PIG UniProtKB/TrEMBL
  A0A4X1UVK6_PIG UniProtKB/TrEMBL
  A0A4X1UVN8_PIG UniProtKB/TrEMBL
  A0A4X1UXI8_PIG UniProtKB/TrEMBL
  A0A4X1UYY8_PIG UniProtKB/TrEMBL
  A0A4X1UYZ2_PIG UniProtKB/TrEMBL
  A0A4X1UZ46_PIG UniProtKB/TrEMBL
  A0A4X1UZF5_PIG UniProtKB/TrEMBL
  A0A4X1V065_PIG UniProtKB/TrEMBL
  A0A4X1V071_PIG UniProtKB/TrEMBL
  A0A8D0NLJ0_PIG UniProtKB/TrEMBL
  A0A8D0NRF0_PIG UniProtKB/TrEMBL
  A0A8D0NSM1_PIG UniProtKB/TrEMBL
  A0A8D0NSR5_PIG UniProtKB/TrEMBL
  A0A8D0NU90_PIG UniProtKB/TrEMBL
  A0A8D0NUE2_PIG UniProtKB/TrEMBL
  A0A8D0NVD2_PIG UniProtKB/TrEMBL
  A0A8D0NYP4_PIG UniProtKB/TrEMBL
  A0A8D0P147_PIG UniProtKB/TrEMBL
  A0A8D0X7T8_PIG UniProtKB/TrEMBL
  A0A8D0X7X2_PIG UniProtKB/TrEMBL
  A0A8D0XB76_PIG UniProtKB/TrEMBL
  A0A8D0XC15_PIG UniProtKB/TrEMBL
  A0A8D0XC92_PIG UniProtKB/TrEMBL
  A0A8D0XCN3_PIG UniProtKB/TrEMBL
  A0A8D0XE04_PIG UniProtKB/TrEMBL
  A0A8D0XEA8_PIG UniProtKB/TrEMBL
  A0A8D0XEX0_PIG UniProtKB/TrEMBL
  A0A8D0ZP57_PIG UniProtKB/TrEMBL
  A0A8D0ZPK1_PIG UniProtKB/TrEMBL
  A0A8D0ZPU4_PIG UniProtKB/TrEMBL
  A0A8D0ZSZ7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0ZT49 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0ZXP0_PIG UniProtKB/TrEMBL
  A0A8D0ZYR7_PIG UniProtKB/TrEMBL
  A0A8D0ZYS3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0ZYX2_PIG UniProtKB/TrEMBL
  A0A8D1CC02_PIG UniProtKB/TrEMBL
  A0A8D1CUK7_PIG UniProtKB/TrEMBL
  A0A8D1G1B6_PIG UniProtKB/TrEMBL
  A0A8D1G2D3_PIG UniProtKB/TrEMBL
  A0A8D1G2P5_PIG UniProtKB/TrEMBL
  A0A8D1G3U3_PIG UniProtKB/TrEMBL
  A0A8D1G3Y6_PIG UniProtKB/TrEMBL
  A0A8D1G5W3_PIG UniProtKB/TrEMBL
  A0A8D1G832_PIG UniProtKB/TrEMBL
  A0A8D1G8S6_PIG UniProtKB/TrEMBL
  A0A8D1ITS2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1IVJ0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1J3Q8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1J5G6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1KMM8_PIG UniProtKB/TrEMBL
  A0A8D1KMR8_PIG UniProtKB/TrEMBL
  A0A8D1L6G9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1LTU4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1R899_PIG UniProtKB/TrEMBL
  A0A8D1R9Y3_PIG UniProtKB/TrEMBL
  A0A8D1RA61_PIG UniProtKB/TrEMBL
  A0A8D1REF1_PIG UniProtKB/TrEMBL
  A0A8D1RIT5_PIG UniProtKB/TrEMBL
  A0A8D1RJL6_PIG UniProtKB/TrEMBL
  A0A8D1RK77_PIG UniProtKB/TrEMBL
  A0A8D1RKS0_PIG UniProtKB/TrEMBL
  A0A8D1RLG5_PIG UniProtKB/TrEMBL
  F1SMI5_PIG UniProtKB/TrEMBL
  I3LDR6_PIG UniProtKB/TrEMBL
  I3LJU9_PIG UniProtKB/TrEMBL
  I3LUI4_PIG UniProtKB/TrEMBL
  P98142 ENTREZGENE
  Q29116 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary P98142 UniProtKB/Swiss-Prot
VGNC ID VGNC:103192 ENTREZGENE