Hmox1 (heme oxygenase 1) - Rat Genome Database

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Gene: Hmox1 (heme oxygenase 1) Ictidomys tridecemlineatus
Analyze
Symbol: Hmox1
Name: heme oxygenase 1
RGD ID: 12555898
Description: ENCODES a protein that exhibits arachidonate omega-hydroxylase activity (ortholog); enzyme binding (ortholog); heme binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to nutrient (ortholog); heme catabolic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme degradation pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute chest syndrome (ortholog); acute kidney failure (ortholog); FOUND IN caveola (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: heme oxygenase (decycling) 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494512,031,937 - 12,038,780 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364925,042,330 - 5,049,311 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364925,042,353 - 5,049,216 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 147 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hmox1Squirrelabdominal aortic aneurysm  ISOHMOX1 (Homo sapiens)9068941 RGDPMID:12182912 and REF_RGD_ID:1580455
Hmox1Squirrelacute chest syndrome  ISOHMOX1 (Homo sapiens)9068941associated with Anemia more ...RGDPMID:22966170 and REF_RGD_ID:10755560
Hmox1Squirrelacute kidney failure treatmentISOHmox1 (Rattus norvegicus)9068941associated with SepsisRGDPMID:23807243 and REF_RGD_ID:10755583
Hmox1SquirrelAcute Lung Injury treatmentISOHmox1 (Rattus norvegicus)9068941 RGDPMID:20360627 and REF_RGD_ID:4140418
Hmox1SquirrelAcute Lung Injury  ISOHmox1 (Rattus norvegicus)9068941associated with Reperfusion InjuryRGDPMID:20850789 and REF_RGD_ID:4145326
Hmox1Squirrelacute myeloid leukemia  ISOHmox1 (Rattus norvegicus)9068941mRNA:increased expression:brain and spleenRGDPMID:19268504 and REF_RGD_ID:10755700
Hmox1Squirreladenocarcinoma susceptibilityISOHMOX1 (Homo sapiens)9068941Lung Adenocarcinoma and DNA:allele:promoter:L allele of the (GT)n repeat (>30 repeats)RGDPMID:15688187 and REF_RGD_ID:1601607
Hmox1Squirreladult respiratory distress syndrome susceptibilityISOHMOX1 (Homo sapiens)9068941DNA:polymorphism:promoterRGDPMID:19526221 and REF_RGD_ID:4145346
Hmox1SquirrelAltitude Sickness  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:23537263 and REF_RGD_ID:10755714
Hmox1SquirrelAlzheimer's disease  ISOHMOX1 (Homo sapiens)9068941protein:increased expression:hippocampus and temporal cortex (human)RGDPMID:7778849 and REF_RGD_ID:1358658
Hmox1Squirrelarteriosclerosis  ISOHmox1 (Mus musculus)9068941 RGDPMID:12958201 and REF_RGD_ID:1598395
Hmox1Squirrelasthma severityISOHMOX1 (Homo sapiens)9068941mRNA more ...RGDPMID:16196283 and REF_RGD_ID:4145408
Hmox1Squirrelasthma  ISOHmox1 (Mus musculus)9068941 RGDPMID:20596599 and REF_RGD_ID:4145403
Hmox1SquirrelBehcet's disease  ISOHMOX1 (Homo sapiens)9068941mRNA:decreased expression:mononulcear cell:RGDPMID:18234118 and REF_RGD_ID:7777175
Hmox1Squirrelberylliosis  ISOHMOX1 (Homo sapiens)9068941protein:increased activity:sputumRGDPMID:19453654 and REF_RGD_ID:4145349
Hmox1SquirrelBlast Crisis  ISOHMOX1 (Homo sapiens)9068941 RGDPMID:22139798 and REF_RGD_ID:10755566
Hmox1SquirrelBrain Death treatmentISOHmox1 (Rattus norvegicus)9068941 RGDPMID:20819234 and REF_RGD_ID:10766439
Hmox1SquirrelBrain Death  ISOHmox1 (Rattus norvegicus)9068941mRNA and protein:increased expression:kidneyRGDPMID:23356498 and REF_RGD_ID:10755728
Hmox1Squirrelbrain edema  ISOHmox1 (Rattus norvegicus)9068941associated with Cerebral Hemorrhage more ...RGDPMID:23438812 and REF_RGD_ID:10766444
Hmox1SquirrelBrain Hypoxia-Ischemia treatmentISOHmox1 (Rattus norvegicus)9068941 RGDPMID:25447631 and REF_RGD_ID:10766440
1 to 20 of 147 rows
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Original Reference(s)
Hmox1Squirreladenylosuccinase lyase deficiency  ISOHMOX1 (Homo sapiens)8554872ClinVar Annotator: match by term: Adenylosuccinate lyase deficiencyClinVarPMID:28492532
Hmox1Squirrelchronic obstructive pulmonary disease  ISOHMOX1 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:21088618 more ...
Hmox1SquirrelHeme Oxygenase 1 Deficiency  ISOHMOX1 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:16199547 more ...
1 to 20 of 62 rows
Object Symbol
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Evidence
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Reference
Notes
Source
Original Reference(s)
Hmox1Squirrelacute kidney failure  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:21048024
Hmox1Squirreladrenoleukodystrophy  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:16319717
Hmox1Squirrelallergic rhinitis  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:36127783
Hmox1SquirrelAlzheimer's disease  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:11144356
Hmox1Squirrelasthma  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:18048809
Hmox1Squirrelblood coagulation disease  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:9884342
Hmox1SquirrelBreast Neoplasms  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:16298037
Hmox1SquirrelCardiomegaly  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:15226216
Hmox1Squirrelcarotid artery disease  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:17095719
Hmox1SquirrelCerebral Hemorrhage  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:12401953
Hmox1SquirrelChemical and Drug Induced Liver Injury  ISOHMOX1 (Homo sapiens)9068941CTD more ...CTDPMID:18227147 and PMID:22688006
Hmox1Squirrelcolitis  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:16365149 and PMID:21444764
Hmox1Squirrelcongestive heart failure  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:22352330
Hmox1Squirrelcontact dermatitis  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:25724174
Hmox1Squirrelcoronary artery disease  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:12136229
Hmox1Squirreldiabetic angiopathy  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:16959961
Hmox1SquirrelDrug-Related Side Effects and Adverse Reactions  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:18227147
Hmox1Squirrelend stage renal disease  ISOHMOX1 (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:22622455
Hmox1SquirrelExperimental Diabetes Mellitus  ISOHMOX1 (Homo sapiens)9068941CTD more ...CTDPMID:16123366 more ...
Hmox1SquirrelExperimental Liver Cirrhosis  ISOHMOX1 (Homo sapiens)9068941CTD more ...CTDPMID:16025519 more ...
1 to 20 of 62 rows
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Reference
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Source
Original Reference(s)
Hmox1Squirrelhemochromatosis  ISOHmox1 (Mus musculus)9068941OMIM:231100MouseDO 
Hmox1Squirrelmalaria  ISOHmox1 (Mus musculus)9068941OMIM:609148 more ...MouseDO 
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hmox1Squirrelchronic obstructive pulmonary disease  ISOHMOX1 (Homo sapiens)7240710 OMIM 
Hmox1SquirrelHeme Oxygenase 1 Deficiency  ISOHMOX1 (Homo sapiens)7240710 OMIM 


Biological Process
1 to 20 of 61 rows

  
Object Symbol
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Term
Qualifier
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Reference
Notes
Source
Original Reference(s)
Hmox1Squirrelangiogenesis  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:12593860 and REF_RGD_ID:1598394
Hmox1Squirrelcellular response to arsenic-containing substance acts_upstream_of_or_withinIEAUniProtKB:P14901 and ensembl:ENSMUSP00000005548150520179 EnsemblGO_REF:0000107
Hmox1Squirrelcellular response to cadmium ion acts_upstream_of_or_withinIEAUniProtKB:P14901 and ensembl:ENSMUSP00000005548150520179 EnsemblGO_REF:0000107
Hmox1Squirrelcellular response to cisplatin acts_upstream_of_or_withinIEAUniProtKB:P14901 and ensembl:ENSMUSP00000005548150520179 EnsemblGO_REF:0000107
Hmox1Squirrelcellular response to heat involved_inIEAUniProtKB:P09601 and ensembl:ENSP00000216117150520179 EnsemblGO_REF:0000107
Hmox1Squirrelcellular response to nutrient  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:15531134 and REF_RGD_ID:1582714
Hmox1Squirrelepithelial cell apoptotic process acts_upstream_ofIEAUniProtKB:P14901 and ensembl:ENSMUSP00000005548150520179 EnsemblGO_REF:0000107
Hmox1Squirrelerythrocyte homeostasis involved_inIEAUniProtKB:P09601 and ensembl:ENSP00000216117150520179 EnsemblGO_REF:0000107
Hmox1Squirrelheme catabolic process involved_inIEAPANTHER:PTN000076422150520179 TreeGrafterGO_REF:0000118
Hmox1Squirrelheme catabolic process involved_inIEAUniProtKB:P09601 and ensembl:ENSP00000216117150520179 EnsemblGO_REF:0000107
Hmox1Squirrelheme catabolic process acts_upstream_of_or_withinIEAUniProtKB:P14901 and ensembl:ENSMUSP00000005548150520179 EnsemblGO_REF:0000107
Hmox1Squirrelheme catabolic process  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:15226268 and REF_RGD_ID:1547877
Hmox1Squirrelheme metabolic process acts_upstream_of_or_withinIEAUniProtKB:P14901 and ensembl:ENSMUSP00000005548150520179 EnsemblGO_REF:0000107
Hmox1Squirrelheme oxidation involved_inIEAPANTHER:PTN000076422150520179 TreeGrafterGO_REF:0000118
Hmox1Squirrelheme oxidation involved_inIEAInterPro:IPR002051 and InterPro:IPR016053150520179 InterProGO_REF:0000002
Hmox1Squirrelheme oxidation involved_inIEAUniProtKB:P09601 and ensembl:ENSP00000216117150520179 EnsemblGO_REF:0000107
Hmox1Squirrelintracellular iron ion homeostasis involved_inIEAUniProtKB:P09601 and ensembl:ENSP00000216117150520179 EnsemblGO_REF:0000107
Hmox1Squirrelintracellular signal transduction  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:12225959 and REF_RGD_ID:625731
Hmox1Squirrelintrinsic apoptotic signaling pathway in response to DNA damage  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:11854317 and REF_RGD_ID:625692
Hmox1Squirrelliver regeneration  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:24815159 and REF_RGD_ID:10755743
1 to 20 of 61 rows

Cellular Component
1 to 9 of 9 rows

  
Object Symbol
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Source
Original Reference(s)
Hmox1Squirrelcaveola  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:15226268 and REF_RGD_ID:1547877
Hmox1Squirrelcytosol is_active_inIEAUniProtKB:P14901 and ensembl:ENSMUSP00000005548150520179 EnsemblGO_REF:0000107
Hmox1Squirrelendoplasmic reticulum located_inIEAUniProtKB:P09601 and ensembl:ENSP00000216117150520179 EnsemblGO_REF:0000107
Hmox1Squirrelendoplasmic reticulum located_inIEAUniProtKB-KW:KW-0256150520179 UniProtGO_REF:0000043
Hmox1Squirrelendoplasmic reticulum membrane located_inIEAUniProtKB:P09601 and ensembl:ENSP00000216117150520179 EnsemblGO_REF:0000107
Hmox1Squirrelendoplasmic reticulum membrane located_inIEAUniProtKB-SubCell:SL-0097150520179 UniProtGO_REF:0000044
Hmox1Squirrelmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
Hmox1Squirrelnucleus located_inIEAUniProtKB:P14901 and ensembl:ENSMUSP00000005548150520179 EnsemblGO_REF:0000107
Hmox1Squirrelperinuclear region of cytoplasm located_inIEAUniProtKB:P09601 and ensembl:ENSP00000216117150520179 EnsemblGO_REF:0000107
1 to 9 of 9 rows

Molecular Function
1 to 20 of 23 rows

  
Object Symbol
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Evidence
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Reference
Notes
Source
Original Reference(s)
Hmox1Squirrelarachidonate omega-hydroxylase activity  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:19889059 and REF_RGD_ID:401794453
Hmox1Squirrelenzyme binding enablesISOUniProtKB:P003889068941PMID:15516695BHF-UCLPMID:15516695 and REF_RGD_ID:8554849
Hmox1Squirrelheme binding  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:12044160 and REF_RGD_ID:730276
Hmox1Squirrelheme binding enablesIEAUniProtKB:P09601 and ensembl:ENSP00000216117150520179 EnsemblGO_REF:0000107
Hmox1Squirrelheme binding enablesIEAPANTHER:PTN000076422150520179 TreeGrafterGO_REF:0000118
Hmox1Squirrelheme oxygenase (decyclizing) activity enablesIEAPANTHER:PTN000076422150520179 TreeGrafterGO_REF:0000118
Hmox1Squirrelheme oxygenase (decyclizing) activity enablesIEAEC:1.14.14.18150520179 UniProtGO_REF:0000003
Hmox1Squirrelheme oxygenase (decyclizing) activity enablesIEAInterPro:IPR002051 more ...150520179 InterProGO_REF:0000002
Hmox1Squirrelheme oxygenase (decyclizing) activity enablesIEAUniProtKB:P09601 and ensembl:ENSP00000216117150520179 EnsemblGO_REF:0000107
Hmox1Squirrelheme oxygenase (decyclizing) activity  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:11854317 and REF_RGD_ID:625692
Hmox1Squirrelidentical protein binding enablesIEAUniProtKB:P09601 and ensembl:ENSP00000216117150520179 EnsemblGO_REF:0000107
Hmox1Squirrelmetal ion binding enablesIEAUniProtKB-KW:KW-0479150520179 UniProtGO_REF:0000043
Hmox1Squirreloxidoreductase activity enablesIEAUniProtKB-KW:KW-0560150520179 UniProtGO_REF:0000043
Hmox1Squirrelphospholipase D activity  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:12511545 and REF_RGD_ID:628519
Hmox1Squirrelprotein binding  ISOCav1 (Rattus norvegicus)9068941 RGDPMID:15226268 and REF_RGD_ID:1547877
Hmox1Squirrelprotein binding enablesISOUniProtKB:Q91X859068941 PMID:32973183UniProtPMID:32973183
Hmox1Squirrelprotein binding enablesISOUniProtKB:P0DTC39068941 PMID:32353859 more ...IntActPMID:32353859 more ...
Hmox1Squirrelprotein binding enablesISOUniProtKB:Q8N6L09068941 PMID:25416956IntActPMID:25416956
Hmox1Squirrelprotein binding enablesISOUniProtKB:O60669 more ...9068941 PMID:32296183IntActPMID:32296183
Hmox1Squirrelprotein binding enablesISOUniProtKB:P29692-29068941 PMID:21597468UniProtPMID:21597468
1 to 20 of 23 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hmox1Squirrelheme degradation pathway  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:15226268 and REF_RGD_ID:1547877
Hmox1Squirrelhypertension pathway  ISOHmox1 (Rattus norvegicus)9068941 RGDPMID:16830363 and REF_RGD_ID:1582701
Hmox1Squirreloxidative stress response pathway  ISOHmox1 (Rattus norvegicus)9068941blood protein analysis (MMO:0000166), western blot assay (MMO:0000669)RGDPMID:29091898 and REF_RGD_ID:15090820

Imported Annotations - SMPDB

Imported Annotations - PID (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Hmox1Squirrelhypoxia inducible factor pathway   ISOHMOX1 (Homo sapiens)9068941 PIDPID:200202
PMID:22301074   PMID:30032202  



Hmox1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494512,031,937 - 12,038,780 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364925,042,330 - 5,049,311 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364925,042,353 - 5,049,216 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HMOX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382235,381,096 - 35,394,207 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2235,380,361 - 35,394,214 (+)EnsemblGRCh38hg38GRCh38
GRCh372235,777,089 - 35,790,200 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362234,107,087 - 34,120,194 (+)NCBINCBI36Build 36hg18NCBI36
Build 342234,101,640 - 34,114,748NCBI
Celera2219,579,740 - 19,592,881 (+)NCBICelera
Cytogenetic Map22q12.3NCBI
HuRef2218,737,577 - 18,750,716 (+)NCBIHuRef
CHM1_12235,735,791 - 35,748,937 (+)NCBICHM1_1
T2T-CHM13v2.02235,839,114 - 35,852,226 (+)NCBIT2T-CHM13v2.0
Hmox1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39875,820,246 - 75,827,221 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl875,820,249 - 75,827,217 (+)EnsemblGRCm39 Ensembl
GRCm38875,093,618 - 75,100,593 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl875,093,621 - 75,100,589 (+)EnsemblGRCm38mm10GRCm38
MGSCv37877,617,517 - 77,624,492 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36877,989,694 - 77,996,657 (+)NCBIMGSCv36mm8
Celera879,400,848 - 79,407,824 (+)NCBICelera
Cytogenetic Map8C1NCBI
cM Map835.59NCBI
Hmox1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81913,452,365 - 13,479,823 (+)NCBIGRCr8
mRatBN7.21913,466,287 - 13,474,082 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1913,467,244 - 13,474,079 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1913,440,832 - 13,447,675 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01914,206,098 - 14,212,941 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01913,487,026 - 13,493,858 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01914,508,634 - 14,515,455 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1914,508,616 - 14,515,456 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01925,622,556 - 25,629,377 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41913,963,139 - 13,969,960 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11913,967,964 - 13,974,784 (+)NCBI
Celera1913,334,259 - 13,341,080 (+)NCBICelera
Cytogenetic Map19p11NCBI
Hmox1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540543,124,510 - 43,130,979 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540543,124,447 - 43,128,873 (+)NCBIChiLan1.0ChiLan1.0
HMOX1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22345,322,157 - 45,335,267 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12248,018,985 - 48,034,597 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02216,388,368 - 16,401,289 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12234,230,825 - 34,244,063 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2234,230,825 - 34,244,063 (+)Ensemblpanpan1.1panPan2
HMOX1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11028,744,404 - 28,751,544 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1028,743,795 - 28,751,773 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1028,683,213 - 28,689,972 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01029,531,402 - 29,538,230 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1029,530,793 - 29,539,227 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11029,255,139 - 29,261,959 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01029,565,774 - 29,572,612 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01029,745,379 - 29,752,300 (-)NCBIUU_Cfam_GSD_1.0
HMOX1
(Sus scrofa - pig)		 No map positions available.
HMOX1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11918,144,466 - 18,157,944 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1918,144,545 - 18,157,971 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045107,791,541 - 107,805,610 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Hmox1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624750342,146 - 345,887 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624750341,699 - 346,005 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.
RefSeq Transcripts XM_005322307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSSTOT00000008917   ⟹   ENSSTOP00000007990
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049364925,042,814 - 5,048,148 (-)Ensembl
Ensembl Acc Id: ENSSTOT00000040235   ⟹   ENSSTOP00000026514
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049364925,042,330 - 5,049,311 (-)Ensembl
RefSeq Acc Id: XM_005322307   ⟹   XP_005322364
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494512,031,937 - 12,038,780 (-)NCBI
SpeTri2.0NW_0049364925,042,353 - 5,049,216 (-)NCBI
Sequence:
Protein RefSeqs XP_005322364 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000007990.3
  ENSSTOP00000026514.1
GenBank Protein KAG3291055 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005322364   ⟸   XM_005322307
- UniProtKB: A0A287CZ33 (UniProtKB/TrEMBL),   I3MCJ9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSTOP00000007990   ⟸   ENSSTOT00000008917
Ensembl Acc Id: ENSSTOP00000026514   ⟸   ENSSTOT00000040235



1 to 17 of 17 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSSTOG00000008923 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000008917.3 UniProtKB/TrEMBL
  ENSSTOT00000040235.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.910.10 UniProtKB/TrEMBL
InterPro Haem_Oase UniProtKB/TrEMBL
  Haem_Oase-like UniProtKB/TrEMBL
  Haem_Oase-like_multi-hlx UniProtKB/TrEMBL
  Haem_oxygenase_CS UniProtKB/TrEMBL
NCBI Gene Hmox1 ENTREZGENE
PANTHER HEME OXYGENASE 1 UniProtKB/TrEMBL
  PTHR10720 UniProtKB/TrEMBL
Pfam Heme_oxygenase UniProtKB/TrEMBL
PRINTS HAEMOXYGNASE UniProtKB/TrEMBL
PROSITE HEME_OXYGENASE UniProtKB/TrEMBL
Superfamily-SCOP SSF48613 UniProtKB/TrEMBL
UniProt A0A287CZ33 ENTREZGENE, UniProtKB/TrEMBL
  I3MCJ9 ENTREZGENE, UniProtKB/TrEMBL
1 to 17 of 17 rows