MGP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 27 | 31,735,301 - 31,738,673 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 27 | 31,734,660 - 31,738,673 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 14,710,348 - 14,713,720 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 32,041,879 - 32,045,251 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 32,041,914 - 32,045,250 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 31,931,196 - 31,934,568 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 31,889,700 - 31,893,072 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 14,442,533 - 14,445,905 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
MGP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 12 | 14,880,864 - 14,885,854 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 14,880,864 - 14,885,857 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 15,033,798 - 15,038,788 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 14,926,094 - 14,930,095 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 14,926,093 - 14,930,095 | NCBI | | | | | Celera | 12 | 20,179,103 - 20,183,841 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | p12.3 | NCBI | | | | | HuRef | 12 | 14,803,571 - 14,808,309 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 15,000,196 - 15,004,934 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 14,758,207 - 14,763,197 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Mgp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 6 | 136,849,433 - 136,852,821 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 136,849,433 - 136,852,821 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 136,872,435 - 136,875,823 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 136,872,435 - 136,875,823 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 136,820,956 - 136,824,326 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 136,836,632 - 136,840,001 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 139,906,448 - 139,909,847 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | G1 | NCBI | | | | | cM Map | 6 | 66.72 | NCBI | | | | |
|
Mgp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 4 | 171,497,472 - 171,500,888 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 169,766,290 - 169,769,612 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 169,766,279 - 169,769,667 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 176,061,104 - 176,064,425 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 171,842,750 - 171,846,072 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 170,466,773 - 170,470,094 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 170,856,783 - 170,860,105 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 170,856,751 - 170,860,225 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 235,113,783 - 235,117,184 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 173,910,595 - 173,913,917 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 174,155,718 - 174,159,041 (-) | NCBI | | | | | Celera | 4 | 158,349,108 - 158,352,430 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q43 | NCBI | | | | |
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Mgp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955413 | 11,615,078 - 11,618,024 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955413 | 11,614,851 - 11,618,090 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MGP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 10 | 20,333,390 - 20,337,473 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 20,330,153 - 20,334,140 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 14,887,806 - 14,891,796 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 15,284,635 - 15,288,794 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 15,284,883 - 15,288,523 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Mgp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404945 | 92,873,783 - 92,878,213 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936587 | 2,601,312 - 2,605,870 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936587 | 2,601,419 - 2,605,848 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
MGP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 5 | 57,665,248 - 57,669,764 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 57,665,272 - 57,669,360 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 61,054,230 - 61,058,317 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
MGP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 11 | 14,776,668 - 14,780,796 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 14,776,209 - 14,780,947 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666069 | 20,529,753 - 20,533,788 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mgp (Heterocephalus glaber - naked mole-rat) |
|