TNC (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 11 | 69,077,532 - 69,169,673 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 11 | 69,077,535 - 69,170,281 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 11 | 67,478,996 - 67,543,867 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 11 | 70,201,293 - 70,293,471 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 11 | 70,201,298 - 70,293,416 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 11 | 68,715,128 - 68,780,124 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 11 | 68,756,416 - 68,820,385 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 11 | 69,487,404 - 69,552,684 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
TNC (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 9 | 115,019,575 - 115,118,157 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 115,019,575 - 115,118,207 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 9 | 117,781,854 - 117,880,436 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 116,822,626 - 116,920,307 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 9 | 114,862,366 - 114,959,993 | NCBI | | | | | Celera | 9 | 88,430,273 - 88,527,747 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | q33.1 | NCBI | | | | | HuRef | 9 | 87,386,539 - 87,484,951 (-) | NCBI | | HuRef | | | CHM1_1 | 9 | 117,928,574 - 118,027,020 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 127,212,162 - 127,310,465 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Tnc (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 4 | 63,878,022 - 63,965,554 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 63,878,022 - 63,965,252 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 63,959,785 - 64,047,015 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 63,959,785 - 64,047,015 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 63,620,819 - 63,681,760 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 63,446,149 - 63,507,087 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 62,620,454 - 62,681,423 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | C1 | NCBI | | | | | cM Map | 4 | 34.06 | NCBI | | | | |
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Tnc (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 5 | 82,391,340 - 82,476,197 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 77,375,851 - 77,460,712 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 77,375,851 - 77,460,624 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 79,772,326 - 79,857,198 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 81,589,535 - 81,674,415 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 81,565,002 - 81,649,884 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 79,789,686 - 79,874,555 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 79,789,671 - 79,874,671 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 83,890,952 - 83,950,462 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 5 | 76,306,295 - 76,365,869 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q24 | NCBI | | | | |
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Tnc (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955419 | 12,569,547 - 12,662,958 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955419 | 12,569,620 - 12,662,897 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TNC (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 11 | 24,252,394 - 24,349,633 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 24,254,811 - 24,351,994 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 86,125,672 - 86,222,804 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 114,486,778 - 114,584,297 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 114,486,778 - 114,584,299 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Tnc (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 184,403,727 - 184,487,858 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936487 | 4,172,886 - 4,233,126 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936487 | 4,172,263 - 4,256,780 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TNC (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 255,533,238 - 255,630,376 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 255,533,235 - 255,630,381 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 286,732,751 - 286,813,962 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | | Pig Cytomap | 1 | q21.1-q21.3 | NCBI | | | | |
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TNC (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 12 | 24,457,616 - 24,556,194 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 24,457,738 - 24,556,451 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666035 | 18,276,825 - 18,375,675 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Tnc (Heterocephalus glaber - naked mole-rat) |
|