ONTOLOGY REPORT - ANNOTATIONS
Term: dendritic spine development
Accession: GO:0060996
browse the term
Definition: The process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.
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Acsl4
acyl-CoA synthetase long-chain family member 4
IMP
RGD
PMID:19166906
RGD:2312805
NCBI chr X:105,942,794...106,006,573
Ensembl chr X:105,942,799...106,006,427
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Arf4
ADP-ribosylation factor 4
acts_upstream_of_or_within involved_in
ISO IEA
MGI:3879059 (MGI:5464048|PMID:23050017) GO_REF:0000107 (PMID:23050017)
RGD Ensembl
PMID:23050017
GO_REF:0000107 MGI:5464048
NCBI chr16:1,896,692...1,913,267
Ensembl chr16:1,896,546...1,913,261
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Arid1b
AT-rich interaction domain 1B
acts_upstream_of_or_within
ISO
(MGI:5771923|PMID:26937011)
RGD
PMID:26937011
MGI:5771923
NCBI chr 1:45,567,991...45,923,644
Ensembl chr 1:45,563,623...45,923,493
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Camk2a
calcium/calmodulin-dependent protein kinase II alpha
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:28130356)
UniProt Ensembl RGD
PMID:28130356
GO_REF:0000024 GO_REF:0000107
NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
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Cntnap2
contactin associated protein 2
involved_in
ISO
MGI:2677631 (MGI:5449476|PMID:23074245), (MGI:5796100|PMID:25951243)
RGD
PMID:23074245 PMID:25951243
MGI:5449476 MGI:5796100
NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
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Ephb1
Eph receptor B1
involved_in acts_upstream_of_or_within
ISS IGI ISO
GO_REF:0000024 PMID:17310244 (MGI:2683349|PMID:14691139)
UniProt RGD
PMID:14691139 PMID:17310244 PMID:17310244
GO_REF:0000024 MGI:2683349 , RGD:10047256 , RGD:10047256
NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
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Ephb2
Eph receptor B2
involved_in
ISO
(MGI:2683349|PMID:14691139)
RGD
PMID:14691139
MGI:2683349
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
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Ephb3
Eph receptor B3
involved_in
ISO
(MGI:2683349|PMID:14691139)
RGD
PMID:14691139
MGI:2683349
NCBI chr11:79,840,668...79,859,467
Ensembl chr11:79,840,668...79,859,370
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Fmr1
fragile X messenger ribonucleoprotein 1
acts_upstream_of_or_within
ISO
MGI:1339656|MGI:1339975|MGI:1339984|MGI:1917834 (MGI:5471853|PMID:23509247)
RGD
PMID:23509247
MGI:5471853
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
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Git1
GIT ArfGAP 1
acts_upstream_of_or_within
IGI
PMID:17310244
MGI
PMID:17310244 PMID:17310244
RGD:10047256 , RGD:10047256
NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373
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Iqsec1
IQ motif and Sec7 domain ArfGEF 1
involved_in
ISO
(MGI:6414710|PMID:31607425)
RGD
PMID:31607425
MGI:6414710
NCBI chr 4:123,168,719...123,488,300
Ensembl chr 4:123,168,719...123,488,172
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Nck2
NCK adaptor protein 2
acts_upstream_of_or_within
IGI
PMID:17310244
MGI
PMID:17310244 PMID:17310244
RGD:10047256 , RGD:10047256
NCBI chr 9:45,713,979...45,840,330
Ensembl chr 9:45,714,883...45,840,307
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Ndp
norrin cystine knot growth factor NDP
acts_upstream_of_or_within
ISO
MGI:4414794 (MGI:6378281|PMID:30936556)
RGD
PMID:30936556
MGI:6378281
NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
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Pak1
p21 (RAC1) activated kinase 1
acts_upstream_of_or_within
ISO
MGI:95564 (MGI:5471853|PMID:23509247)
RGD
PMID:23509247
MGI:5471853
NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
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Pak2
p21 (RAC1) activated kinase 2
acts_upstream_of_or_within
ISO
MGI:95564 (MGI:5471853|PMID:23509247)
RGD
PMID:23509247
MGI:5471853
NCBI chr11:68,708,070...68,766,622
Ensembl chr11:68,707,969...68,768,816
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Pak3
p21 (RAC1) activated kinase 3
acts_upstream_of_or_within
ISO
MGI:95564 (MGI:5471853|PMID:23509247)
RGD
PMID:23509247
MGI:5471853
NCBI chr X:107,116,308...107,374,342
Ensembl chr X:107,260,898...107,368,314
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Pak4
p21 (RAC1) activated kinase 4
acts_upstream_of_or_within
ISO
MGI:95564 (MGI:5471853|PMID:23509247)
RGD
PMID:23509247
MGI:5471853
NCBI chr 1:83,849,904...83,889,188
Ensembl chr 1:83,849,904...83,859,413
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Slc12a5
solute carrier family 12 member 5
involved_in
IDA IEA ISO
PMID:22345354 GO_REF:0000107 (PMID:24668262)
Ensembl RGD
PMID:24668262 PMID:22345354
GO_REF:0000107, RGD:10449516
NCBI chr 3:153,696,522...153,735,801
Ensembl chr 3:153,696,517...153,735,765
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Slc9a6
solute carrier family 9 member A6
acts_upstream_of_or_within
ISO
MGI:3604561 (MGI:5515840|PMID:24035762)
RGD
PMID:24035762
MGI:5515840
NCBI chr X:134,430,588...134,486,747
Ensembl chr X:134,420,756...134,485,375
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Spire1
spire-type actin nucleation factor 1
acts_upstream_of_or_within
ISO
MGI:4310183 (MGI:5698045|PMID:24345451)
RGD
PMID:24345451
MGI:5698045
NCBI chr18:61,041,290...61,171,670
Ensembl chr18:61,041,290...61,171,899
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Srgap2
SLIT-ROBO Rho GTPase activating protein 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5427519|PMID:22559944) (PMID:22559944)
UniProt RGD
PMID:22559944
GO_REF:0000024 MGI:5427519
NCBI chr13:42,745,956...42,967,083
Ensembl chr13:42,745,947...42,967,058
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Uba6
ubiquitin-like modifier activating enzyme 6
acts_upstream_of_or_within
ISO
MGI:2176173|MGI:5509054 (MGI:5495570|PMID:23499007)
RGD
PMID:23499007
MGI:5495570
NCBI chr14:21,884,039...21,947,857
Ensembl chr14:21,884,039...21,947,857
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Cdc42
cell division cycle 42
involved_in
ISS ISO
GO_REF:0000024 (MGI:5825418|PMID:25851601)
UniProt RGD
PMID:25851601
GO_REF:0000024 MGI:5825418
NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
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Ctnnd2
catenin delta 2
involved_in
ISO IEA
(PMID:25807484) GO_REF:0000107
RGD Ensembl
PMID:25807484
GO_REF:0000107
NCBI chr 2:81,168,976...82,016,495
Ensembl chr 2:81,167,117...82,015,764
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Dip2a
disco-interacting protein 2 homolog A
involved_in
ISO
(MGI:6364690|PMID:31600191)
RGD
PMID:31600191
MGI:6364690
NCBI chr20:12,284,566...12,371,068
Ensembl chr20:12,284,654...12,370,217
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Dlg4
discs large MAGUK scaffold protein 4
involved_in
IMP IEA ISO
PMID:21525273 GO_REF:0000107 (MGI:5285520|PMID:20952458)
Ensembl RGD
PMID:20952458 PMID:21525273
GO_REF:0000107 MGI:5285520 , RGD:8554095
NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
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Dock10
dedicator of cytokinesis 10
involved_in
ISO
(MGI:5825418|PMID:25851601)
RGD
PMID:25851601
MGI:5825418
NCBI chr 9:81,843,599...82,101,540
Ensembl chr 9:81,843,604...82,101,525
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Dvl1
dishevelled segment polarity protein 1
involved_in
IGI
PMID:21670302
ParkinsonsUK-UCL
PMID:21670302
RGD:10449514
NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
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Epha5
EPH receptor A5
involved_in
IDA
PMID:20824214
UniProt
PMID:20824214
RGD:8554330
NCBI chr14:23,653,393...24,020,135
Ensembl chr14:23,653,393...24,017,317
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Ephb1
Eph receptor B1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (MGI:2683349|PMID:14691139) (MGI:3707923|PMID:17310244)
UniProt RGD
PMID:14691139 PMID:17310244
GO_REF:0000024 MGI:2683349 MGI:3707923
NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
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Ephb2
Eph receptor B2
acts_upstream_of_or_within involved_in
ISO
(MGI:3707923|PMID:17310244) (MGI:2683349|PMID:14691139)
RGD
PMID:14691139 PMID:17310244
MGI:2683349 MGI:3707923
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
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Ephb3
Eph receptor B3
involved_in
ISO
(MGI:2683349|PMID:14691139)
RGD
PMID:14691139
MGI:2683349
NCBI chr11:79,840,668...79,859,467
Ensembl chr11:79,840,668...79,859,370
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Hdac6
histone deacetylase 6
acts_upstream_of_or_within
ISO
(MGI:5547631|PMID:24113571)
RGD
PMID:24113571
MGI:5547631
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
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Myo5b
myosin Vb
IMP
RGD
PMID:18984164
RGD:11533643
NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
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Pak3
p21 (RAC1) activated kinase 3
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5825418|PMID:25851601)
UniProt Ensembl RGD
PMID:25851601
GO_REF:0000024 GO_REF:0000107 MGI:5825418
NCBI chr X:107,116,308...107,374,342
Ensembl chr X:107,260,898...107,368,314
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Prmt3
protein arginine methyltransferase 3
IMP
RGD
PMID:20647003
RGD:9491824
NCBI chr 1:99,492,712...99,581,774
Ensembl chr 1:99,492,724...99,579,435
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Pten
phosphatase and tensin homolog
involved_in
ISO
(MGI:3772418|PMID:18082964), (MGI:5320272|PMID:21411674)
RGD
PMID:18082964 PMID:21411674
MGI:3772418 MGI:5320272
NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
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Septin7
septin 7
acts_upstream_of_or_within
ISO
(MGI:5547631|PMID:24113571)
RGD
PMID:24113571
MGI:5547631
NCBI chr 8:23,719,448...23,783,247
Ensembl chr 8:23,716,030...23,783,243
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Shank1
SH3 and multiple ankyrin repeat domains 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3775591|PMID:18272690)
BHF-UCL RGD
PMID:18272690
GO_REF:0000024 MGI:3775591
NCBI chr 1:94,807,879...94,857,356
Ensembl chr 1:94,808,276...94,855,824
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Shank3
SH3 and multiple ankyrin repeat domains 3
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:5056336 (MGI:5013997|PMID:21558424) (MGI:4948759|PMID:21423165), (MGI:5285139|PMID:21167025) GO_REF:0000107
BHF-UCL RGD Ensembl
PMID:21167025 PMID:21423165 PMID:21558424
GO_REF:0000024 GO_REF:0000107 MGI:4948759 MGI:5013997 MGI:5285139
NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
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Wasl
WASP like actin nucleation promoting factor
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5825418|PMID:25851601) GO_REF:0000024
Ensembl RGD UniProt
PMID:25851601
GO_REF:0000024 GO_REF:0000107 MGI:5825418
NCBI chr 4:53,083,536...53,132,061
Ensembl chr 4:53,083,536...53,132,022
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Wnt7a
Wnt family member 7A
involved_in
ISO
(PMID:21670302) UniProtKB:Q9WVB9 (MGI:5014434|PMID:21670302)
RGD
PMID:21670302
MGI:5014434
NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
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Zfp365
zinc finger protein 365
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5908530|PMID:25983680)
UniProt Ensembl RGD
PMID:25983680
GO_REF:0000024 GO_REF:0000107 MGI:5908530
NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238
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Apoe
apolipoprotein E
acts_upstream_of_or_within
ISO
(PMID:24328732)
RGD
PMID:24328732
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
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Asap1
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:5464048|PMID:23050017)
Ensembl RGD
PMID:23050017
GO_REF:0000107 MGI:5464048
NCBI chr 7:95,786,130...96,093,111
Ensembl chr 7:95,787,818...96,092,754
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Fstl4
follistatin-like 4
acts_upstream_of_or_within
ISO
(MGI:5566541|PMID:24573299)
RGD
PMID:24573299
MGI:5566541
NCBI chr10:36,911,228...37,338,665
Ensembl chr10:36,911,420...37,338,588
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Grin3a
glutamate ionotropic receptor NMDA type subunit 3A
involved_in
IDA
PMID:24297929
UniProt
PMID:24297929
RGD:42721994
NCBI chr 5:64,006,847...64,206,408
Ensembl chr 5:64,009,980...64,206,085
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Hdac2
histone deacetylase 2
IMP
RGD
PMID:23485013
RGD:9590265
NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
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Mecp2
methyl CpG binding protein 2
IMP
RGD
PMID:24636259
RGD:12789709
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
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Ngfr
nerve growth factor receptor
IMP
RGD
PMID:22548193
RGD:10413901
NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
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Plk2
polo-like kinase 2
IMP
RGD
PMID:18723513
RGD:7241135
NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947
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Ptprs
protein tyrosine phosphatase, receptor type, S
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5431284|PMID:22519304)
UniProt Ensembl RGD
PMID:22519304
GO_REF:0000024 GO_REF:0000107 MGI:5431284
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
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Dnm3
dynamin 3
IDA
RGD
PMID:17880892
RGD:8553820
NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
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Dtnbp1
dystrobrevin binding protein 1
IMP IDA
RGD
PMID:20531346 PMID:20531346
RGD:11251757 , RGD:11251757
NCBI chr17:19,685,218...19,776,668
Ensembl chr17:19,685,215...19,776,661
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Efna1
ephrin A1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3696283|PMID:17143272)
UniProt RGD
PMID:17143272
GO_REF:0000024 MGI:3696283
NCBI chr 2:174,681,676...174,690,306
Ensembl chr 2:174,681,682...174,690,866
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Ngef
neuronal guanine nucleotide exchange factor
involved_in
ISS ISO
GO_REF:0000024 (MGI:3696283|PMID:17143272)
UniProt RGD
PMID:17143272
GO_REF:0000024 MGI:3696283
NCBI chr 9:88,146,956...88,244,454
Ensembl chr 9:88,146,956...88,244,914
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Nlgn1
neuroligin 1
involved_in
ISO IEA ISS
UniProtKB:Q99K10 (PMID:23143522) GO_REF:0000107 (MGI:5493186|PMID:23143522) GO_REF:0000024
RGD Ensembl BHF-UCL
PMID:23143522
GO_REF:0000024 GO_REF:0000107 MGI:5493186
NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
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Nlgn3
neuroligin 3
involved_in
ISO
(MGI:5286761|PMID:21808020)
RGD
PMID:21808020
MGI:5286761
NCBI chr X:66,427,926...66,457,378
Ensembl chr X:66,429,458...66,451,876
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Pten
phosphatase and tensin homolog
involved_in
ISO
(MGI:3629385|PMID:16675393)
RGD
PMID:16675393
MGI:3629385
NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
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Ube3a
ubiquitin protein ligase E3A
IMP
RGD
PMID:25867122
RGD:11079590
NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250
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Apoe
apolipoprotein E
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:24328732) GO_REF:0000107
RGD Ensembl
PMID:24328732
GO_REF:0000107
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
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Arf1
ADP-ribosylation factor 1
IMP
RGD
PMID:23889934
RGD:8553918
NCBI chr10:43,997,983...44,014,543
Ensembl chr10:43,997,986...44,014,434
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Camk1
calcium/calmodulin-dependent protein kinase I
involved_in
ISO IEA ISS
(PMID:18184567) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:18184567
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:146,481,196...146,492,039
Ensembl chr 4:146,481,196...146,492,081
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Cdkl5
cyclin-dependent kinase-like 5
IMP
RGD
PMID:23671101
RGD:12791021
NCBI chr X:33,757,605...33,988,075
Ensembl chr X:33,821,257...33,986,582
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Cfl1
cofilin 1
IMP
RGD
PMID:25723479
RGD:11570400
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
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Cpeb3
cytoplasmic polyadenylation element binding protein 3
involved_in
ISO
(MGI:5300629|PMID:22153079)
RGD
PMID:22153079
MGI:5300629
NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
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Crebbp
CREB binding protein
IMP
RGD
PMID:32206715
RGD:126848802
NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888
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Dlg5
discs large MAGUK scaffold protein 5
involved_in
ISO
(MGI:5608921|PMID:25232112)
RGD
PMID:25232112
MGI:5608921
NCBI chr15:75,786...209,735
Ensembl chr15:75,786...187,837
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Eif4g2
eukaryotic translation initiation factor 4, gamma 2
IMP
RGD
PMID:22514323
RGD:10755512
NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588
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Fmr1
fragile X messenger ribonucleoprotein 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3798322|PMID:18539120)
UniProt RGD
PMID:18539120
GO_REF:0000024 MGI:3798322
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
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Foxo6
forkhead box O6
involved_in
ISO
(MGI:5461238|PMID:23222102)
RGD
PMID:23222102
MGI:5461238
NCBI chr 5:133,856,800...133,875,922
Ensembl chr 5:133,856,072...133,876,573
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Grn
granulin precursor
IMP
RGD
PMID:21813674
RGD:5509044
NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
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Hnrnpk
heterogeneous nuclear ribonucleoprotein K
IMP
RGD
PMID:24990929
RGD:10002784
NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
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Il2
interleukin 2
IDA
RGD
PMID:20225203
RGD:5147914
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
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Itsn1
intersectin 1
IMP
RGD
PMID:19258322
RGD:13461864
NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
G
Kalrn
kalirin, RhoGEF kinase
acts_upstream_of_or_within
ISO
MGI:3831288|MGI:3831292|MGI:97845 (MGI:3821420|PMID:19020030), (MGI:5645427|PMID:25865668)
RGD
PMID:19020030 PMID:25865668
MGI:3821420 MGI:5645427
NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
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Llph
LLP homolog, long-term synaptic facilitation factor
involved_in
ISO
(MGI:5796065|PMID:26961175)
RGD
PMID:26961175
MGI:5796065
NCBI chr 7:55,735,317...55,740,341
Ensembl chr 7:55,735,400...55,740,339
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Lpar1
lysophosphatidic acid receptor 1
IDA
RGD
PMID:16638019
RGD:2317707
NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895
G
Mapk6
mitogen-activated protein kinase 6
acts_upstream_of_or_within
ISO
MGI:1333110 (MGI:5430253|PMID:22508986)
RGD
PMID:22508986
MGI:5430253
NCBI chr 8:76,146,650...76,169,767
Ensembl chr 8:76,146,690...76,169,720
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Mapkapk5
MAPK activated protein kinase 5
acts_upstream_of_or_within
ISO
MGI:1354946|MGI:2680287 (MGI:5430253|PMID:22508986)
RGD
PMID:22508986
MGI:5430253
NCBI chr12:34,993,520...35,013,059
Ensembl chr12:34,994,092...35,013,052
G
Mecp2
methyl CpG binding protein 2
IMP
RGD
PMID:24188180
RGD:12789443
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
G
Mtor
mechanistic target of rapamycin kinase
IMP
RGD
PMID:21683721
RGD:10040994
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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Neurl1
neuralized E3 ubiquitin protein ligase 1
involved_in
ISO
(MGI:5300629|PMID:22153079)
RGD
PMID:22153079
MGI:5300629
NCBI chr 1:246,066,642...246,152,890
Ensembl chr 1:246,067,100...246,152,903
G
Nlgn1
neuroligin 1
involved_in
IMP IEA ISO IDA
GO_REF:0000107 (MGI:5493186|PMID:23143522) PMID:17582332 UniProtKB:Q99K10 (PMID:23143522)
Ensembl RGD
PMID:23143522 PMID:15681343 PMID:17582332
GO_REF:0000107 MGI:5493186 , RGD:8553420 , RGD:8553502
NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
G
Nlgn2
neuroligin 2
IMP
RGD
PMID:15681343
RGD:8553420
NCBI chr10:54,544,588...54,557,854
Ensembl chr10:54,544,588...54,558,434
G
Nlgn3
neuroligin 3
IMP
RGD
PMID:15681343
RGD:8553420
NCBI chr X:66,427,926...66,457,378
Ensembl chr X:66,429,458...66,451,876
G
Nr3c1
nuclear receptor subfamily 3, group C, member 1
IMP
RGD
PMID:22509272
RGD:7174739
NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
G
Nrg1
neuregulin 1
acts_upstream_of_or_within
ISO
MGI:1928831 (MGI:3803029|PMID:18596162)
RGD
PMID:18596162
MGI:3803029
NCBI chr16:59,250,658...60,303,024
Ensembl chr16:59,250,854...60,296,884
G
Palm
paralemmin
involved_in
ISO
(MGI:5009384|PMID:18287537)
RGD
PMID:18287537
MGI:5009384
NCBI chr 7:9,886,634...9,912,389
Ensembl chr 7:9,886,643...9,912,555
G
Pbrm1
polybromo 1
IMP
RGD
PMID:31723243
RGD:150340632
NCBI chr16:6,213,507...6,312,895
Ensembl chr16:6,213,300...6,311,780
G
Ppp1r9a
protein phosphatase 1, regulatory subunit 9A
IMP
RGD
PMID:12052877
RGD:1299363
NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
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Psen1
presenilin 1
involved_in
ISO
(PMID:21951279)
RGD
PMID:21951279
NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
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Rac1
Rac family small GTPase 1
acts_upstream_of_or_within
ISO
MGI:2685385 (MGI:5645427|PMID:25865668)
RGD
PMID:25865668
MGI:5645427
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
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RGD1563888
similar to DNA segment, Chr 16, ERATO Doi 472, expressed
involved_in
ISO
(MGI:5908509|PMID:27404227)
RGD
PMID:27404227
MGI:5908509
NCBI chr11:17,229,129...17,262,307
Ensembl chr11:17,229,138...17,262,483
G
Shank1
SH3 and multiple ankyrin repeat domains 1
involved_in
IDA
PMID:18287537
UniProt
PMID:18287537
RGD:8553517
NCBI chr 1:94,807,879...94,857,356
Ensembl chr 1:94,808,276...94,855,824
G
Shank3
SH3 and multiple ankyrin repeat domains 3
involved_in
ISS ISO IEA
PMID:21795692 (MGI:5320264|PMID:21795692) GO_REF:0000107
RGD Ensembl
PMID:21795692 PMID:21795692
GO_REF:0000107 MGI:5320264 , RGD:7349315
NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
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Tsc2
TSC complex subunit 2
IMP
RGD
PMID:16595860
RGD:11568665
NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
G
Zmynd8
zinc finger, MYND-type containing 8
IMP
RGD
PMID:24117785
RGD:8554267
NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463
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Actr2
actin related protein 2
IMP
RGD
PMID:23441206
RGD:11530033
NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524
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Actr3
actin related protein 3
IMP
RGD
PMID:23441206
RGD:11530033
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
G
Afdn
afadin, adherens junction formation factor
IMP
RGD
PMID:22948147
RGD:13838731
NCBI chr 1:53,884,711...54,034,216
Ensembl chr 1:53,905,373...54,034,216
G
Baiap2
BAR/IMD domain containing adaptor protein 2
IMP
RGD
PMID:15673667
RGD:9684988
NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
G
Camk2b
calcium/calmodulin-dependent protein kinase II beta
involved_in
IMP
PMID:12873385
UniProt
PMID:12873385
RGD:8553829
NCBI chr14:80,845,206...80,934,172
Ensembl chr14:80,845,238...80,933,994
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Caprin1
cell cycle associated protein 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:4888105|PMID:20516077) GO_REF:0000107
UniProt RGD Ensembl
PMID:20516077
GO_REF:0000024 GO_REF:0000107 MGI:4888105
NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502
G
Caprin2
caprin family member 2
involved_in
ISO
(MGI:4888105|PMID:20516077)
RGD
PMID:20516077
MGI:4888105
NCBI chr 4:181,806,105...181,860,754
Ensembl chr 4:181,806,575...181,860,830
G
Cask
calcium/calmodulin dependent serine protein kinase
IMP
RGD
PMID:18606847
RGD:11576294
NCBI chr X:8,899,500...9,243,014
Ensembl chr X:8,899,833...9,238,694
G
Cux2
cut-like homeobox 2
involved_in
ISO
(MGI:4836115|PMID:20510857)
RGD
PMID:20510857
MGI:4836115
NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
G
Dbn1
drebrin 1
involved_in
IMP IEA IBA ISS ISO
GO_REF:0000107 PMID:21873635 GO_REF:0000024 (MGI:5688247|PMID:25865831)
Ensembl UniProt RGD
PMID:25865831 PMID:19174472 PMID:21873635
GO_REF:0000024 GO_REF:0000107 MGI:5688247 , RGD:10398809 , RGD:13792537
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
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Dbnl
drebrin-like
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
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Dhx36
DEAH-box helicase 36
involved_in
IMP
PMID:23651854
UniProt
PMID:23651854
RGD:13792545
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
G
Dnm1l
dynamin 1-like
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
G
Eef2k
eukaryotic elongation factor-2 kinase
IMP
RGD
PMID:20427644
RGD:10401235
NCBI chr 1:175,393,119...175,454,452
Ensembl chr 1:175,393,154...175,455,164
G
Ephb2
Eph receptor B2
IMP
RGD
PMID:21364901
RGD:127285794
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Gprasp3
G protein-coupled receptor associated sorting protein family member 3
involved_in
ISO
(MGI:5545985|PMID:21199326)
RGD
PMID:21199326
MGI:5545985
NCBI chr X:98,820,289...98,854,949
Ensembl chr X:98,817,593...98,854,545
G
Itpka
inositol-trisphosphate 3-kinase A
acts_upstream_of_or_within
IMP
PMID:19890013
MGI
PMID:19890013
RGD:8553536
NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600
G
Kalrn
kalirin, RhoGEF kinase
acts_upstream_of_or_within involved_in
ISO IEA
MGI:4358076 (MGI:4355773|PMID:19625617) GO_REF:0000107
RGD Ensembl
PMID:19625617
GO_REF:0000107 MGI:4355773
NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
G
Lrp8
LDL receptor related protein 8
involved_in
ISO
(MGI:5426130|PMID:21852430)
RGD
PMID:21852430
MGI:5426130
NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
G
Marcks
myristoylated alanine rich protein kinase C substrate
IMP
RGD
PMID:16202710
RGD:9685333
NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012
G
Mfn1
mitofusin 1
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr 2:115,313,380...115,359,651
Ensembl chr 2:115,313,401...115,359,640
G
Mfn2
mitofusin 2
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
G
Opa1
OPA1, mitochondrial dynamin like GTPase
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
G
Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
involved_in
ISO
(MGI:5619436|PMID:23483716)
RGD
PMID:23483716
MGI:5619436
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
G
Pak3
p21 (RAC1) activated kinase 3
IMP
RGD
PMID:18481281
RGD:7775053
NCBI chr X:107,116,308...107,374,342
Ensembl chr X:107,260,898...107,368,314
G
Reln
reelin
involved_in
IEA ISO
GO_REF:0000107 (MGI:5286805|PMID:21664258), (MGI:5426130|PMID:21852430)
Ensembl RGD
PMID:21664258 PMID:21852430
GO_REF:0000107 MGI:5286805 MGI:5426130
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
G
Stau2
staufen double-stranded RNA binding protein 2
IMP
RGD
PMID:16418534
RGD:10043163
NCBI chr 5:2,840,801...3,084,451
Ensembl chr 5:2,840,765...3,084,929
G
Tiam1
TIAM Rac1 associated GEF 1
IMP
RGD
PMID:16474385
RGD:10043325
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
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Arf6
ADP-ribosylation factor 6
involved_in
ISO IBA IMP
(MGI:4887338|PMID:16325184) PMID:21873635 PMID:16672654
RGD
PMID:16325184 PMID:21873635 PMID:16672654
MGI:4887338 , RGD:13792537 , RGD:8554141
NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114
G
Cpeb3
cytoplasmic polyadenylation element binding protein 3
involved_in
ISO
(MGI:5521401|PMID:24155305)
RGD
PMID:24155305
MGI:5521401
NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
G
Disc1
DISC1 scaffold protein
IMP
RGD
PMID:20139976
RGD:5509795
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
G
Fmr1
fragile X messenger ribonucleoprotein 1
involved_in
ISO ISS
(PMID:16631377) (MGI:3655188|PMID:16631377) GO_REF:0000024
RGD UniProt
PMID:16631377
GO_REF:0000024 MGI:3655188
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
G
Kif1a
kinesin family member 1A
involved_in
IMP
PMID:30021165
UniProt
PMID:30021165
RGD:14995321
NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (MGI:3804504|PMID:18599438)
UniProt RGD
PMID:18599438
GO_REF:0000024 MGI:3804504
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Ppfia2
PTPRF interacting protein alpha 2
involved_in
ISO
(PMID:30021165)
RGD
PMID:30021165
NCBI chr 7:41,765,716...42,240,104
Ensembl chr 7:41,765,575...42,239,599
G
Sdk1
sidekick cell adhesion molecule 1
acts_upstream_of_or_within
ISO
(MGI:5551515|PMID:24449909)
RGD
PMID:24449909
MGI:5551515
NCBI chr12:12,378,074...13,363,934
Ensembl chr12:12,380,524...13,363,976
G
Tanc2
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
involved_in
IMP
PMID:30021165
UniProt
PMID:30021165
RGD:14995321
NCBI chr10:90,553,124...90,873,477
Ensembl chr10:90,553,002...90,868,756
G
Abi2
abl-interactor 2
involved_in
ISO
(MGI:3525751|PMID:15572692)
RGD
PMID:15572692
MGI:3525751
NCBI chr 9:61,856,379...61,904,029
Ensembl chr 9:61,827,139...61,905,699
G
Abi3bp
ABI family member 3 binding protein
involved_in
IMP
PMID:22485184
ARUK-UCL
PMID:22485184
RGD:42721990
NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
G
Adam10
ADAM metallopeptidase domain 10
IMP
RGD
PMID:22328515
RGD:13703034
NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889
G
Arc
activity-regulated cytoskeleton-associated protein
involved_in
IGI
PMID:15537891
ARUK-UCL
PMID:15537891
RGD:13210528
NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378
G
Arhgap33
Rho GTPase activating protein 33
IMP
RGD
PMID:24003235
RGD:13508596
NCBI chr 1:85,776,112...85,789,767
Ensembl chr 1:85,776,108...85,789,678
G
Arhgap44
Rho GTPase activating protein 44
involved_in
IBA ISO
PMID:21873635 (MGI:5582709|PMID:24352656)
RGD
PMID:24352656 PMID:21873635
MGI:5582709 , RGD:13792537
NCBI chr10:49,655,583...49,822,876
Ensembl chr10:49,655,584...49,824,297
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Cdk5
cyclin-dependent kinase 5
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3696283|PMID:17143272)
UniProt Ensembl RGD
PMID:17143272
GO_REF:0000024 GO_REF:0000107 MGI:3696283
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
G
Cdk5r1
cyclin-dependent kinase 5 regulatory subunit 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3696283|PMID:17143272)
UniProt RGD
PMID:17143272
GO_REF:0000024 MGI:3696283
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
G
Cfl1
cofilin 1
involved_in
ISO ISS
(PMID:24464040) GO_REF:0000024
RGD ParkinsonsUK-UCL
PMID:24464040
GO_REF:0000024
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
G
Dnm3
dynamin 3
IMP
RGD
PMID:15741233
RGD:8554738
NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
G
Epha4
Eph receptor A4
involved_in
ISS ISO
GO_REF:0000024 (MGI:3696283|PMID:17143272)
UniProt RGD
PMID:17143272
GO_REF:0000024 MGI:3696283
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Kif1a
kinesin family member 1A
involved_in
IMP
PMID:30021165
UniProt
PMID:30021165
RGD:14995321
NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480
G
Lrrk2
leucine-rich repeat kinase 2
involved_in
ISO ISS
(PMID:21168496) UniProtKB:P23528 (MGI:5553024|PMID:24464040) GO_REF:0000024
RGD ParkinsonsUK-UCL
PMID:21168496 PMID:24464040
GO_REF:0000024 MGI:5553024
NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
G
Lzts3
leucine zipper tumor suppressor family member 3
involved_in
IMP IBA
PMID:27252646 PMID:21873635
UniProt GO_Central
PMID:27252646 PMID:21873635
RGD:13210540 , RGD:13792537
NCBI chr 3:117,850,286...117,861,132
Ensembl chr 3:117,851,702...117,860,081
G
Nlgn3
neuroligin 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:5286761|PMID:21808020)
BHF-UCL RGD
PMID:21808020 PMID:21808020
GO_REF:0000024 MGI:5286761 , RGD:8553412
NCBI chr X:66,427,926...66,457,378
Ensembl chr X:66,429,458...66,451,876
G
Pdlim5
PDZ and LIM domain 5
involved_in
IDA
PMID:19900557
UniProt
PMID:19900557
RGD:8554803
NCBI chr 2:230,952,251...231,120,329
Ensembl chr 2:230,952,248...231,120,275
G
Ppfia2
PTPRF interacting protein alpha 2
involved_in
ISO
(PMID:30021165)
RGD
PMID:30021165
NCBI chr 7:41,765,716...42,240,104
Ensembl chr 7:41,765,575...42,239,599
G
Ppp1r9a
protein phosphatase 1, regulatory subunit 9A
IMP
RGD
PMID:15473970
RGD:10043779
NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
G
Shank3
SH3 and multiple ankyrin repeat domains 3
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5320264|PMID:21795692)
Ensembl RGD
PMID:21795692 PMID:21795692
GO_REF:0000107 MGI:5320264 , RGD:7349315
NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
G
Sipa1l1
signal-induced proliferation-associated 1 like 1
involved_in
IDA
PMID:11502259
UniProt
PMID:11502259
RGD:8554032
NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950
G
Srcin1
SRC kinase signaling inhibitor 1
involved_in
IBA IEA ISS ISO
PMID:21873635 GO_REF:0000107 GO_REF:0000024 (PMID:19146815)
Ensembl UniProt RGD
PMID:19146815 PMID:21873635
GO_REF:0000024 GO_REF:0000107, RGD:13792537
NCBI chr10:82,511,101...82,568,706
Ensembl chr10:82,504,393...82,571,040
G
Tanc2
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
involved_in
IMP IBA
PMID:30021165 PMID:21873635
UniProt GO_Central
PMID:30021165 PMID:21873635
RGD:14995321 , RGD:13792537
NCBI chr10:90,553,124...90,873,477
Ensembl chr10:90,553,002...90,868,756
G
Zdhhc15
zinc finger DHHC-type palmitoyltransferase 15
involved_in
IMP
PMID:31189538
UniProt
PMID:31189538
RGD:25671406
NCBI chr X:69,568,086...69,701,756
Ensembl chr X:69,574,124...69,701,756
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all