ONTOLOGY REPORT - ANNOTATIONS
Term: regulation of dendritic spine development
Accession: GO:0060998
browse the term
Definition: Any process that modulates the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.
G
Arf6
ADP-ribosylation factor 6
involved_in
IBA IMP ISO
PMID:21873635 PMID:16672654 (MGI:4887338|PMID:16325184)
RGD
PMID:16325184 PMID:21873635 PMID:16672654
MGI:4887338 , RGD:13792537 , RGD:8554141
NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114
G
Cpeb3
cytoplasmic polyadenylation element binding protein 3
involved_in
ISO
(MGI:5521401|PMID:24155305)
RGD
PMID:24155305
MGI:5521401
NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
G
Disc1
DISC1 scaffold protein
IMP
RGD
PMID:20139976
RGD:5509795
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
G
Fmr1
fragile X messenger ribonucleoprotein 1
involved_in
ISO ISS
(PMID:16631377) (MGI:3655188|PMID:16631377) GO_REF:0000024
RGD UniProt
PMID:16631377
GO_REF:0000024 MGI:3655188
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
G
Kif1a
kinesin family member 1A
involved_in
IMP
PMID:30021165
UniProt
PMID:30021165
RGD:14995321
NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (MGI:3804504|PMID:18599438)
Alzheimers_University_of_Toronto RGD
PMID:18599438
GO_REF:0000024 MGI:3804504
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Ppfia2
PTPRF interacting protein alpha 2
involved_in
ISO
(PMID:30021165)
RGD
PMID:30021165
NCBI chr 7:41,765,716...42,240,104
Ensembl chr 7:41,765,575...42,239,599
G
Sdk1
sidekick cell adhesion molecule 1
acts_upstream_of_or_within
ISO
(MGI:5551515|PMID:24449909)
RGD
PMID:24449909
MGI:5551515
NCBI chr12:12,378,074...13,363,934
Ensembl chr12:12,380,524...13,363,976
G
Tanc2
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
involved_in
IMP
PMID:30021165
UniProt
PMID:30021165
RGD:14995321
NCBI chr10:90,553,124...90,873,477
Ensembl chr10:90,553,002...90,868,756
G
Apoe
apolipoprotein E
acts_upstream_of_or_within
ISO
(PMID:24328732)
RGD
PMID:24328732
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
G
Asap1
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:5464048|PMID:23050017)
Ensembl RGD
PMID:23050017
GO_REF:0000107 MGI:5464048
NCBI chr 7:95,786,130...96,093,111
Ensembl chr 7:95,787,818...96,092,754
G
Fstl4
follistatin-like 4
acts_upstream_of_or_within
ISO
(MGI:5566541|PMID:24573299)
RGD
PMID:24573299
MGI:5566541
NCBI chr10:36,911,228...37,338,665
Ensembl chr10:36,911,420...37,338,588
G
Grin3a
glutamate ionotropic receptor NMDA type subunit 3A
involved_in
IDA
PMID:24297929
UniProt
PMID:24297929
RGD:42721994
NCBI chr 5:64,006,847...64,206,408
Ensembl chr 5:64,009,980...64,206,085
G
Hdac2
histone deacetylase 2
IMP
RGD
PMID:23485013
RGD:9590265
NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
G
Mecp2
methyl CpG binding protein 2
IMP
RGD
PMID:24636259
RGD:12789709
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
G
Ngfr
nerve growth factor receptor
IMP
RGD
PMID:22548193
RGD:10413901
NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
G
Plk2
polo-like kinase 2
IMP
RGD
PMID:18723513
RGD:7241135
NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947
G
Ptprs
protein tyrosine phosphatase, receptor type, S
involved_in
ISS ISO
GO_REF:0000024 (MGI:5431284|PMID:22519304)
UniProt RGD
PMID:22519304
GO_REF:0000024 MGI:5431284
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
G
Dnm3
dynamin 3
IDA
RGD
PMID:17880892
RGD:8553820
NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
G
Dtnbp1
dystrobrevin binding protein 1
IMP IDA
RGD
PMID:20531346 PMID:20531346
RGD:11251757 , RGD:11251757
NCBI chr17:19,685,218...19,776,668
Ensembl chr17:19,685,215...19,776,661
G
Efna1
ephrin A1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3696283|PMID:17143272)
UniProt RGD
PMID:17143272
GO_REF:0000024 MGI:3696283
NCBI chr 2:174,681,676...174,690,306
Ensembl chr 2:174,681,682...174,690,866
G
Ngef
neuronal guanine nucleotide exchange factor
involved_in
ISS ISO
GO_REF:0000024 (MGI:3696283|PMID:17143272)
UniProt RGD
PMID:17143272
GO_REF:0000024 MGI:3696283
NCBI chr 9:88,146,956...88,244,454
Ensembl chr 9:88,146,956...88,244,914
G
Nlgn1
neuroligin 1
involved_in
ISO ISS
UniProtKB:Q99K10 (PMID:23143522) (MGI:5493186|PMID:23143522) GO_REF:0000024
RGD BHF-UCL
PMID:23143522
GO_REF:0000024 MGI:5493186
NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
G
Nlgn3
neuroligin 3
involved_in
ISO
(MGI:5286761|PMID:21808020)
RGD
PMID:21808020
MGI:5286761
NCBI chr X:66,427,926...66,457,378
Ensembl chr X:66,429,458...66,451,876
G
Pten
phosphatase and tensin homolog
involved_in
ISO
(MGI:3629385|PMID:16675393)
RGD
PMID:16675393
MGI:3629385
NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
G
Ube3a
ubiquitin protein ligase E3A
IMP
RGD
PMID:25867122
RGD:11079590
NCBI chr 1:110,070,260...110,161,675
Ensembl chr 1:110,070,480...110,157,250
G
Apoe
apolipoprotein E
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:24328732) GO_REF:0000107
RGD Ensembl
PMID:24328732
GO_REF:0000107
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
G
Arf1
ADP-ribosylation factor 1
IMP
RGD
PMID:23889934
RGD:8553918
NCBI chr10:43,997,983...44,014,543
Ensembl chr10:43,997,986...44,014,434
G
Camk1
calcium/calmodulin-dependent protein kinase I
involved_in
ISO ISS
(PMID:18184567) GO_REF:0000024
RGD UniProt
PMID:18184567
GO_REF:0000024
NCBI chr 4:146,481,196...146,492,039
Ensembl chr 4:146,481,196...146,492,081
G
Cdkl5
cyclin-dependent kinase-like 5
IMP
RGD
PMID:23671101
RGD:12791021
NCBI chr X:33,757,605...33,988,075
Ensembl chr X:33,821,257...33,986,582
G
Cfl1
cofilin 1
IMP
RGD
PMID:25723479
RGD:11570400
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
G
Cpeb3
cytoplasmic polyadenylation element binding protein 3
involved_in
ISO
(MGI:5300629|PMID:22153079)
RGD
PMID:22153079
MGI:5300629
NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
G
Crebbp
CREB binding protein
IMP
RGD
PMID:32206715
RGD:126848802
NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888
G
Dlg5
discs large MAGUK scaffold protein 5
involved_in
ISO
(MGI:5608921|PMID:25232112)
RGD
PMID:25232112
MGI:5608921
NCBI chr15:75,786...209,735
Ensembl chr15:75,786...187,837
G
Eif4g2
eukaryotic translation initiation factor 4, gamma 2
IMP
RGD
PMID:22514323
RGD:10755512
NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588
G
Fmr1
fragile X messenger ribonucleoprotein 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3798322|PMID:18539120)
UniProt RGD
PMID:18539120
GO_REF:0000024 MGI:3798322
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
G
Foxo6
forkhead box O6
involved_in
ISO
(MGI:5461238|PMID:23222102)
RGD
PMID:23222102
MGI:5461238
NCBI chr 5:133,856,800...133,875,922
Ensembl chr 5:133,856,072...133,876,573
G
Grn
granulin precursor
IMP
RGD
PMID:21813674
RGD:5509044
NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
G
Hnrnpk
heterogeneous nuclear ribonucleoprotein K
IMP
RGD
PMID:24990929
RGD:10002784
NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
G
Il2
interleukin 2
IDA
RGD
PMID:20225203
RGD:5147914
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
G
Itsn1
intersectin 1
IMP
RGD
PMID:19258322
RGD:13461864
NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
G
Kalrn
kalirin, RhoGEF kinase
acts_upstream_of_or_within
ISO
MGI:3831288|MGI:3831292|MGI:97845 (MGI:3821420|PMID:19020030), (MGI:5645427|PMID:25865668)
RGD
PMID:19020030 PMID:25865668
MGI:3821420 MGI:5645427
NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
G
Llph
LLP homolog, long-term synaptic facilitation factor
involved_in
ISO
(MGI:5796065|PMID:26961175)
RGD
PMID:26961175
MGI:5796065
NCBI chr 7:55,735,317...55,740,341
Ensembl chr 7:55,735,400...55,740,339
G
Lpar1
lysophosphatidic acid receptor 1
IDA
RGD
PMID:16638019
RGD:2317707
NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895
G
Mapk6
mitogen-activated protein kinase 6
acts_upstream_of_or_within
ISO
MGI:1333110 (MGI:5430253|PMID:22508986)
RGD
PMID:22508986
MGI:5430253
NCBI chr 8:76,146,650...76,169,767
Ensembl chr 8:76,146,690...76,169,720
G
Mapkapk5
MAPK activated protein kinase 5
acts_upstream_of_or_within
ISO
MGI:1354946|MGI:2680287 (MGI:5430253|PMID:22508986)
RGD
PMID:22508986
MGI:5430253
NCBI chr12:34,993,520...35,013,059
Ensembl chr12:34,994,092...35,013,052
G
Mecp2
methyl CpG binding protein 2
IMP
RGD
PMID:24188180
RGD:12789443
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
G
Mtor
mechanistic target of rapamycin kinase
IMP
RGD
PMID:21683721
RGD:10040994
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Neurl1
neuralized E3 ubiquitin protein ligase 1
involved_in
ISO
(MGI:5300629|PMID:22153079)
RGD
PMID:22153079
MGI:5300629
NCBI chr 1:246,066,642...246,152,890
Ensembl chr 1:246,067,100...246,152,903
G
Nlgn1
neuroligin 1
involved_in
IMP ISO IDA
(MGI:5493186|PMID:23143522) PMID:17582332 UniProtKB:Q99K10 (PMID:23143522)
RGD
PMID:23143522 PMID:15681343 PMID:17582332
MGI:5493186 , RGD:8553420 , RGD:8553502
NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
G
Nlgn2
neuroligin 2
IMP
RGD
PMID:15681343
RGD:8553420
NCBI chr10:54,544,588...54,557,854
Ensembl chr10:54,544,588...54,558,434
G
Nlgn3
neuroligin 3
IMP
RGD
PMID:15681343
RGD:8553420
NCBI chr X:66,427,926...66,457,378
Ensembl chr X:66,429,458...66,451,876
G
Nr3c1
nuclear receptor subfamily 3, group C, member 1
IMP
RGD
PMID:22509272
RGD:7174739
NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
G
Nrg1
neuregulin 1
acts_upstream_of_or_within
ISO
MGI:1928831 (MGI:3803029|PMID:18596162), (MGI:4461331|PMID:20610754)
RGD
PMID:18596162 PMID:20610754
MGI:3803029 MGI:4461331
NCBI chr16:59,250,658...60,303,024
Ensembl chr16:59,250,854...60,296,884
G
Palm
paralemmin
involved_in
ISO
(MGI:5009384|PMID:18287537)
RGD
PMID:18287537
MGI:5009384
NCBI chr 7:9,886,634...9,912,389
Ensembl chr 7:9,886,643...9,912,555
G
Pbrm1
polybromo 1
IMP
RGD
PMID:31723243
RGD:150340632
NCBI chr16:6,213,507...6,312,895
Ensembl chr16:6,213,300...6,311,780
G
Ppp1r9a
protein phosphatase 1, regulatory subunit 9A
IMP
RGD
PMID:12052877
RGD:1299363
NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
G
Psen1
presenilin 1
involved_in
ISO
(PMID:21951279)
RGD
PMID:21951279
NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
G
Rac1
Rac family small GTPase 1
acts_upstream_of_or_within
ISO
MGI:2685385 (MGI:5645427|PMID:25865668)
RGD
PMID:25865668
MGI:5645427
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
G
RGD1563888
similar to DNA segment, Chr 16, ERATO Doi 472, expressed
involved_in
ISO
(MGI:5908509|PMID:27404227)
RGD
PMID:27404227
MGI:5908509
NCBI chr11:17,229,129...17,262,307
Ensembl chr11:17,229,138...17,262,483
G
Shank1
SH3 and multiple ankyrin repeat domains 1
involved_in
IDA
PMID:18287537
UniProt
PMID:18287537
RGD:8553517
NCBI chr 1:94,807,879...94,857,356
Ensembl chr 1:94,808,276...94,855,824
G
Shank3
SH3 and multiple ankyrin repeat domains 3
involved_in
ISS ISO IEA
PMID:21795692 (MGI:5320264|PMID:21795692) GO_REF:0000107
RGD Ensembl
PMID:21795692 PMID:21795692
GO_REF:0000107 MGI:5320264 , RGD:7349315
NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
G
Tsc2
TSC complex subunit 2
IMP
RGD
PMID:16595860
RGD:11568665
NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
G
Zmynd8
zinc finger, MYND-type containing 8
IMP
RGD
PMID:24117785
RGD:8554267
NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463
G
Actr2
actin related protein 2
IMP
RGD
PMID:23441206
RGD:11530033
NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524
G
Actr3
actin related protein 3
IMP
RGD
PMID:23441206
RGD:11530033
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
G
Afdn
afadin, adherens junction formation factor
IMP
RGD
PMID:22948147
RGD:13838731
NCBI chr 1:53,884,711...54,034,216
Ensembl chr 1:53,905,373...54,034,216
G
Baiap2
BAR/IMD domain containing adaptor protein 2
IMP
RGD
PMID:15673667
RGD:9684988
NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
G
Bhlhb9
basic helix-loop-helix family member B9
involved_in
ISO
(MGI:5545985|PMID:21199326)
RGD
PMID:21199326
MGI:5545985
NCBI chr X:98,820,289...98,854,949
Ensembl chr X:98,817,593...98,854,545
G
Camk2b
calcium/calmodulin-dependent protein kinase II beta
involved_in
IMP
PMID:12873385
UniProt
PMID:12873385
RGD:8553829
NCBI chr14:80,845,206...80,934,172
Ensembl chr14:80,845,238...80,933,994
G
Caprin1
cell cycle associated protein 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:4888105|PMID:20516077)
UniProt RGD
PMID:20516077
GO_REF:0000024 MGI:4888105
NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502
G
Caprin2
caprin family member 2
involved_in
ISO
(MGI:4888105|PMID:20516077)
RGD
PMID:20516077
MGI:4888105
NCBI chr 4:181,806,105...181,860,754
Ensembl chr 4:181,806,575...181,860,830
G
Cask
calcium/calmodulin dependent serine protein kinase
IMP
RGD
PMID:18606847
RGD:11576294
NCBI chr X:8,899,500...9,243,014
Ensembl chr X:8,899,833...9,238,694
G
Cux2
cut-like homeobox 2
involved_in
ISO
(MGI:4836115|PMID:20510857)
RGD
PMID:20510857
MGI:4836115
NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
G
Dbn1
drebrin 1
involved_in
IMP ISO ISS IBA IEA
(MGI:5688247|PMID:25865831) GO_REF:0000024 PMID:21873635 GO_REF:0000107
RGD UniProt Ensembl
PMID:25865831 PMID:19174472 PMID:21873635
GO_REF:0000024 GO_REF:0000107 MGI:5688247 , RGD:10398809 , RGD:13792537
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
G
Dbnl
drebrin-like
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
G
Dhx36
DEAH-box helicase 36
involved_in
IMP
PMID:23651854
UniProt
PMID:23651854
RGD:13792545
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
G
Dnm1l
dynamin 1-like
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
G
Eef2k
eukaryotic elongation factor-2 kinase
IMP
RGD
PMID:20427644
RGD:10401235
NCBI chr 1:175,393,119...175,454,452
Ensembl chr 1:175,393,154...175,455,164
G
Ephb2
Eph receptor B2
IMP
RGD
PMID:21364901
RGD:127285794
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Itpka
inositol-trisphosphate 3-kinase A
acts_upstream_of_or_within
IMP
PMID:19890013
MGI
PMID:19890013
RGD:8553536
NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600
G
Kalrn
kalirin, RhoGEF kinase
acts_upstream_of_or_within
ISO
MGI:4358076 (MGI:4355773|PMID:19625617)
RGD
PMID:19625617
MGI:4355773
NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
G
Lrp8
LDL receptor related protein 8
involved_in
ISO
(MGI:5426130|PMID:21852430)
RGD
PMID:21852430
MGI:5426130
NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
G
Marcks
myristoylated alanine rich protein kinase C substrate
IMP
RGD
PMID:16202710
RGD:9685333
NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012
G
Mfn1
mitofusin 1
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr 2:115,313,380...115,359,651
Ensembl chr 2:115,313,401...115,359,640
G
Mfn2
mitofusin 2
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
G
Opa1
OPA1, mitochondrial dynamin like GTPase
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
G
Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
involved_in
ISO
(MGI:5619436|PMID:23483716)
RGD
PMID:23483716
MGI:5619436
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
G
Pak3
p21 (RAC1) activated kinase 3
IMP
RGD
PMID:18481281
RGD:7775053
NCBI chr X:107,116,308...107,374,342
Ensembl chr X:107,260,898...107,368,314
G
Reln
reelin
involved_in
IEA ISO
GO_REF:0000107 (MGI:5286805|PMID:21664258), (MGI:5426130|PMID:21852430)
Ensembl RGD
PMID:21664258 PMID:21852430
GO_REF:0000107 MGI:5286805 MGI:5426130
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
G
Stau2
staufen double-stranded RNA binding protein 2
IMP
RGD
PMID:16418534
RGD:10043163
NCBI chr 5:2,840,801...3,084,451
Ensembl chr 5:2,840,765...3,084,929
G
Tiam1
TIAM Rac1 associated GEF 1
IMP
RGD
PMID:16474385
RGD:10043325
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all