Alc17 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Alc17 (Alcohol consumption QTL 17) Rattus norvegicus

Symbol: Alc17
Name: Alcohol consumption QTL 17
RGD ID: 738023
Previously known as: Consumption of Ethanol 5%; Coet5a
Trait: consumption behavior trait   (VT:0002069)    
Measurement Type: ethanol drink intake rate to body weight ratio   (CMO:0001616)    
LOD Score: 3.1
P Value: 0.003
Variance: 38.0
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.261 - 27,574,569RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.061 - 35,623,029RGD_MAPPER_PIPELINERnor6.0
Rnor_5.06580,292 - 45,580,292RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.461 - 35,786,687RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.160 - 35,786,687RGD
Cross Type: intercross
Strains Crossed: WKY HEP 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method
scale  (IDA)

Vertebrate Trait

Rat Strain
HEP  (IEA)
WKY  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetics of behaviour: phenotypic and molecular study of rats derived from high- and low-alcohol consuming lines. Terenina-Rigaldie E, etal., Pharmacogenetics 2003 Sep;13(9):543-54.
Related QTLs

Related QTL Description Reference
Sach4 interacts with RGD:731213
Sach5 interacts with RGD:731213
Alc14 interacts with RGD:731213
Alc15 interacts with RGD:731213
Alc16 interacts with RGD:731213


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1585856Ralbp1l2ralA binding protein 1 like 2638788192192Rat
41317278Txnl4al2thioredoxin-like 4A like 26111150111805Rat
7685759Naa11-ps2N(alpha)-acetyltransferase 11, NatA catalytic subunit, pseudogene 26111437112376Rat
11409802LOC108350029uncharacterized LOC1083500296118567177281Rat
1310083Cwf19l2CWF19 like cell cycle control factor 26290148356636Rat
41248162Tmem126a-ps4transmembrane protein 126A, pseudogene 46310136310857Rat
1304687Alkbh8alkB homolog 8, tRNA methyltransferase6378779449382Rat
7740587Pank3-ps2pantothenate kinase 3, pseudogene 26402201406363Rat
1304582Mtm1myotubularin 16488923506882Rat
7723359LOC102553826uncharacterized LOC1025538266507112528358Rat
1596478Rrs1-ps15ribosome biogenesis regulator 1 homolog, pseudogene 156540847548560Rat
2319303Egln1-ps6egl-9 family hypoxia-inducible factor 1, pseudogene 66556312561717Rat
1597710Car13l1carbonic anhydrase 13 like 16615673623476Rat
1564275Znhit1-ps1zinc finger, HIT-type containing 1, pseudogene 16887012887449Rat
7242712Crnkl1-ps1crooked neck pre-mRNA splicing factor 1, pseudogene 1611406151142929Rat
41289894LOC120093494small nucleolar RNA U3612524181252490Rat
1560460Ppp1cb-ps7protein phosphatase 1 catalytic subunit beta, pseudogene 7613918881394865Rat
1309234Uap1l2UDP-N-acteylglucosamine pyrophosphorylase 1-like 2617143201741396Rat
6502562Wac-ps1WW domain containing adaptor with coiled-coil, pseudogene 1620002782003353Rat
2321089LOC100360971hypothetical LOC100360971620200262110273Rat
1598336Gys1-ps1glycogen synthase 1, pseudogene 1629138882915998Rat
41244779LOC120103454uncharacterized LOC120103454631221663164292Rat
628659Nrxn1neurexin 1631777884323848Rat
41065222LOC120093189uncharacterized LOC120093189633938643427483Rat
41085448Ap2m1-ps2adaptor related protein complex 2 subunit mu 1, pseudogene 2635250493539614Rat
40944671LOC120093188uncharacterized LOC120093188637287463739049Rat
40999787LOC120093187uncharacterized LOC120093187638245533835155Rat
40972029LOC12009318660S ribosomal protein L10a-like639335853942489Rat
1598337Ptbp1-ps4polypyrimidine tract binding protein 1, pseudogene 4643711134372603Rat
41112646Envl-ps18MLV-related proviral Env polyprotein-like, pseudogene 18643856494387545Rat
11480265LOC108351174uncharacterized LOC108351174648679204897060Rat
2632Fshrfollicle stimulating hormone receptor651988255406785Rat
7695048LOC102549991uncharacterized LOC102549991654858265487213Rat
3007Lhcgrluteinizing hormone/choriogonadotropin receptor656618715728109Rat
1308625Gtf2a1lgeneral transcription factor 2A subunit 1 like657528145834797Rat
41108217LOC120103455uncharacterized LOC120103455658086065869766Rat
727878Ston1stonin 1658431865892557Rat
41304927Ube2s-ps2ubiquitin-conjugating enzyme E2S, pseudogene 2658829885884287Rat
1565310Ppp1r21protein phosphatase 1, regulatory subunit 21659015185970684Rat
7584786LOC102546644uncharacterized LOC102546644660015366012391Rat
1562291Foxn2forkhead box N2660186536065226Rat
11412449LOC108351324nuclear cap-binding protein subunit 2 pseudogene661430276146570Rat
41259853LOC120103456uncharacterized LOC120103456661830656195327Rat
1562306H2az1-ps2H2A.Z variant histone 1, pseudogene 2663629736363359Rat
41009777LOC120103457uncharacterized LOC120103457663870726392670Rat
41130543LOC120103458uncharacterized LOC120103458663936926397003Rat
727935Fbxo11F-box protein 11664867616562664Rat
41013989Ndufb1-ps3NADH:ubiquinone oxidoreductase subunit B1, pseudogene 3664996916500020Rat
2322311Msh6mutS homolog 6665626316579995Rat
68940Kcnk12potassium two pore domain channel subfamily K member 12667401476790664Rat
41092315LOC120103460uncharacterized LOC120103460667877276788596Rat
620786Msh2mutS homolog 2668137936872960Rat
621365Epcamepithelial cell adhesion molecule668801426896103Rat
41376381LOC120103461uncharacterized LOC120103461669315796939747Rat
40945724Rps15a-ps4ribosomal protein S15a, pseudogene 4669800346980728Rat
41096318LOC120103462uncharacterized LOC120103462669892077002165Rat
40978669LOC120103464uncharacterized LOC120103464670066217015159Rat
41362460LOC120103463uncharacterized LOC120103463670195397034241Rat
11443157LOC108351172uncharacterized LOC108351172670729367078802Rat
41126532LOC120093413small nucleolar RNA SNORD113/SNORD114 family670824167082482Rat
41002896LOC120093446small nucleolar RNA SNORA17670843127084445Rat
2258Calm2calmodulin 2670916247104284Rat
1591638Stpg4sperm-tail PG-rich repeat containing 4671088277158519Rat
1306211Ttc7atetratricopeptide repeat domain 7A671592857261826Rat
4888601Mir3558microRNA 3558671817517181864Rat
41053189LOC120103465uncharacterized LOC120103465672145927222511Rat
628690Mcfd2multiple coagulation factor deficiency 2, ER cargo receptor complex subunit672744697285841Rat
41205604LOC120103467uncharacterized LOC120103467674140827418998Rat
1564914Socs5suppressor of cytokine signaling 5674810397512644Rat
2325125Kpna2l1karyopherin subunit alpha 2 like 1675391657541177Rat
621545CriptCXXC repeat containing interactor of PDZ3 domain675814287589384Rat
1584658Pigfphosphatidylinositol glycan anchor biosynthesis, class F675895847617719Rat
621626Rhoqras homolog family member Q676136327652047Rat
1311680Atp6v1e2ATPase H+ transporting V1 subunit E2676673597673711Rat
1588160Tmem247transmembrane protein 247676965177701464Rat
2324313LOC100362645Egam-1N-like677519447755356Rat
68404Epas1endothelial PAS domain protein 1677902367871717Rat
41305804Eif3h-ps1eukaryotic translation initiation factor 3, subunit H, pseudogene 1679393607940434Rat
61925Prkceprotein kinase C, epsilon679650488451966Rat
1562146Prkcel1protein kinase C, epsilon like 1681767638181995Rat
7702239Pgam1-ps7phosphoglycerate mutase 1, pseudogene 7683156798319172Rat
41212443LOC120093190uncharacterized LOC120093190684523228461174Rat
7502774LOC102551445uncharacterized LOC102551445684651758473251Rat
1562788Srbd1S1 RNA binding domain 1684735918664544Rat
7522754LOC102551210uncharacterized LOC102551210687060148734589Rat
41091305LOC120103470uncharacterized LOC120103470688310278850178Rat
7534844LOC102551142uncharacterized LOC102551142689733988974582Rat
1310792Six2SIX homeobox 2689748598981345Rat
620909Six3SIX homeobox 3690390179043336Rat
11423888LOC108351167uncharacterized LOC108351167690456109061487Rat
41070373LOC120103471uncharacterized LOC120103471690838699109478Rat
1583783Slc25a3-ps2solute carrier family 25 member 3, pseudogene 2691535169155654Rat
1310453Camkmtcalmodulin-lysine N-methyltransferase691989459580200Rat
41018048LOC120093505U6 spliceosomal RNA693449909345096Rat
41148650LOC120093312U6 spliceosomal RNA695747829574888Rat
1310143Preplprolyl endopeptidase-like695803679609957Rat
3709Slc3a1solute carrier family 3 member 1696081699641881Rat
3374Ppm1bprotein phosphatase, Mg2+/Mn2+ dependent, 1B696466959707471Rat
6496793LOC100910809uncharacterized LOC100910809697717479789422Rat
1306575Lrpprcleucine-rich pentatricopeptide repeat containing698598169942294Rat
11496786Rpl26-ps12ribosomal protein L26, pseudogene 12699204349921084Rat
620300Abcg8ATP binding cassette subfamily G member 8699456299964912Rat
620298Abcg5ATP binding cassette subfamily G member 5699651189990563Rat
1310286Dync2li1dynein cytoplasmic 2 light intermediate chain 16999253710025355Rat
41028128LOC120093294U6 spliceosomal RNA61002706810027172Rat
1304935Plekhh2pleckstrin homology, MyTH4 and FERM domain containing H261003283710132081Rat
1560519ThadaTHADA, armadillo repeat containing61018394210488007Rat
1308913Zfp36l2zinc finger protein 36, C3H type-like 261049003210494073Rat
11488608LOC108351166uncharacterized LOC10835116661052667810530961Rat
7609114Sypl1-ps2synaptophysin-like 1, pseudogene 261054549710548918Rat
41317467LOC120093193uncharacterized LOC12009319361061074610635328Rat
7612440LOC102548368uncharacterized LOC10254836861075002610768661Rat
7556929LOC102548459wiskott-Aldrich syndrome protein family member 1-like61082928010831419Rat
11501632Trnai-uau2transfer RNA isoleucine (anticodon UAU) 261083035410830446Rat
41013930LOC120093196uncharacterized LOC12009319661084041310846118Rat
71071Haao3-hydroxyanthranilate 3,4-dioxygenase61084523510864863Rat
1306803Mta3metastasis associated 1 family, member 361086702810987221Rat
628832Kcng3potassium voltage-gated channel modifier subfamily G member 361105131111099264Rat
41017011LOC120093197uncharacterized LOC12009319761117154911174023Rat
1306111Cox7a2lcytochrome c oxidase subunit 7A2 like61118406411198287Rat
1304690Eml4EMAP like 461121954511334824Rat
41086840Tpt1-ps10tumor protein, translationally-controlled 1 pseudogene 1061127659911281855Rat
7670283LOC102556624uncharacterized LOC10255662461137269211391056Rat
1584001H3f3a-ps3H3.3 histone A, pseudogene 361142150211422456Rat
1311939Pkdccprotein kinase domain containing, cytoplasmic61145568611465002Rat
40976299LOC120103472uncharacterized LOC12010347261150009711506294Rat
41369146LOC120103473uncharacterized LOC12010347361154293711571649Rat
6500550LOC100910081uncharacterized LOC10091008161159164611595180Rat
41061512LOC120093297U6 spliceosomal RNA61167129611671408Rat
1597030Psme3-ps3proteasome activator subunit 3, pseudogene 361171370711714533Rat
9236593LOC103692540phosphomannomutase 1 pseudogene61172600911726743Rat
7641948LOC102552412uncharacterized LOC10255241261208624212306215Rat
11472968Trnan-guu7transfer RNA asparagine (anticodon GUU) 761211289212112965Rat
41084834LOC120093453small nucleolar RNA SNORA1761259463112594762Rat
41343787LOC120103474uncharacterized LOC12010347461264155012651167Rat
6501902Set-ps7Set nuclear proto-oncogene, pseudogene 761290888912920762Rat
41135465LOC120103475uncharacterized LOC12010347561304145813055736Rat
3717Slc8a1solute carrier family 8 member A161319460913547369Rat
41176911LOC120093498U4 spliceosomal RNA61320151713201659Rat
1306878Thumpd2THUMP domain containing 261392474213976657Rat
1303057Tmem178atransmembrane protein 178A61400462914063677Rat
11506404LOC108351161uncharacterized LOC10835116161408466814150295Rat
41271659LOC120103476uncharacterized LOC12010347661411879214128563Rat
7726994LOC102551891uncharacterized LOC10255189161419089814203284Rat
621280Map4k3mitogen-activated protein kinase kinase kinase kinase 361427662314446321Rat
7610953LOC102551744eukaryotic translation initiation factor 1-like61434740114348136Rat
1583704Cdkl4cyclin-dependent kinase-like 461444982214492568Rat
1310949Sos1SOS Ras/Rac guanine nucleotide exchange factor 161453387014613348Rat
1560224Arhgef33Rho guanine nucleotide exchange factor 3361458292214715014Rat
1597031Eif4a2-ps2eukaryotic translation initiation factor 4A2, pseudogene 261471092714712015Rat
1563988Morn2MORN repeat containing 261471879914725281Rat
1310340Dhx57DExH-box helicase 5761472530514776321Rat
1311168Gemin6gem (nuclear organelle) associated protein 661478609014790617Rat
1311615Ttc39dtetratricopeptide repeat domain 39D61480275314811516Rat
1307425Srsf7serine and arginine rich splicing factor 761481177514818968Rat
1359459Galmgalactose mutarotase61483754014889484Rat
41194476LOC120093299U6 spliceosomal RNA61491725114917354Rat
1305861Hnrnpllheterogeneous nuclear ribonucleoprotein L-like61496995315000574Rat
41266585LOC120093309U6 spliceosomal RNA61499589114995987Rat
1305125Atl2atlastin GTPase 261513907115180421Rat
11514173LOC108351158uncharacterized LOC10835115861525788415259593Rat
7638001LOC102554703uncharacterized LOC10255470361526002815283578Rat
2460Cyp1b1cytochrome P450, family 1, subfamily b, polypeptide 161534231215350886Rat
1559836Rmdn2regulator of microtubule dynamics 261537256915443000Rat
1305858Cdc42ep3CDC42 effector protein 361571089415731366Rat
41359201LOC120093233uncharacterized LOC12009323361577979215782678Rat
9259827LOC103692532uncharacterized LOC10369253261579340315800448Rat
1585899Atp5mgl3ATP synthase membrane subunit G like 361594531515945626Rat
2324081Morf4l1-ps1mortality factor 4 like 1, pseudogene 161594752715948501Rat
1562284Qpctglutaminyl-peptide cyclotransferase61596465615996730Rat
6489794Rps17-ps9ribosomal protein S17, pseudogene 961602364216027014Rat
1310236Prkd3protein kinase D361603250716108444Rat
1311578Ndufaf7NADH:ubiquinone oxidoreductase complex assembly factor 761610863016119810Rat
1304994CebpzCCAAT/enhancer binding protein zeta61611987116137600Rat
9177508CebpzosCEBPZ opposite strand61613554616140143Rat
1585984Hnrnpf-ps4heterogeneous nuclear ribonucleoprotein F, pseudogene 461614421316146357Rat
1598187Sult6b1sulfotransferase family 6B member 161616238216187116Rat
3402Eif2ak2eukaryotic translation initiation factor 2-alpha kinase 261618900016224972Rat
41131139LOC120103477uncharacterized LOC12010347761621465816215105Rat
1311424Gpatch11G patch domain containing 1161622993316243305Rat
1359216Heatr5bHEAT repeat containing 5B61624342416323444Rat
3782Strnstriatin61633526516422159Rat
1564128Vitvitrin61644596616565644Rat
619709Fez2fasciculation and elongation protein zeta 261665457216694628Rat
40956779LOC120093475U2 spliceosomal RNA61667808216678256Rat
1308710Crim1cysteine rich transmembrane BMP regulator 161669586416870264Rat
41357253LOC120103478uncharacterized LOC12010347861681892116820617Rat
2323142Nsa2-ps2NSA2 ribosome biogenesis factor, pseudogene 261688941016892523Rat
1587169H3f3a-ps1H3.3 histone A, pseudogene 161697392316974753Rat
7711568LOC102553200uncharacterized LOC10255320061759201217596460Rat
1592088Hsp90ab1-ps3heat shock protein 90 alpha family class B member 1, pseudogene 361782661217828822Rat
41384706Ndufa12-ps1NADH:ubiquinone oxidoreductase subunit A12, pseudogene 161816135018161849Rat
11495481LOC108351326peptidyl-prolyl cis-trans isomerase D pseudogene61881549218816893Rat
41222005LOC120093295U6 spliceosomal RNA61904531919045424Rat
1583780Hspd1-ps11heat shock protein family D (Hsp60) member 1, pseudogene 1161927385119276050Rat
41200534LOC120093234uncharacterized LOC12009323461959860619614675Rat
1583779St13-ps3ST13, Hsp70 interacting protein, pseudogene 361973853019740177Rat
1583702Ldha-ps13lactate dehydrogenase A, pseudogene 1361977230219773267Rat
1305486Fam98afamily with sequence similarity 98, member A61987408219888744Rat
1304612Rasgrp3RAS guanyl releasing protein 361989536119993945Rat
7676249Rpl32-ps18ribosomal protein L32, pseudogene 1861994876019958584Rat
68379Ltbp1latent transforming growth factor beta binding protein 162002962920425339Rat
41098799LOC120103479uncharacterized LOC12010347962008854420109208Rat
11470604LOC10835135640S ribosomal protein S18 pseudogene62045050520450948Rat
41211263LOC120093429small nucleolar RNA SNORA4862053064520530788Rat
1305264Ttc27tetratricopeptide repeat domain 2762055875620702126Rat
11419109LOC108351178uncharacterized LOC10835117862061936220624156Rat
41392415LOC120093282U6 spliceosomal RNA62063098220631088Rat
1307247Birc6baculoviral IAP repeat-containing 662072292220916396Rat
1310157Yipf4Yip1 domain family, member 462095077420962195Rat
1309831Nlrc4NLR family, CARD domain containing 462099178521018254Rat
1309250Slc30a6solute carrier family 30 member 662102093121050785Rat
9086644LOC103692563uncharacterized LOC10369256362105087021070583Rat
1308494Spastspastin62105534921106586Rat
1591362Rpl18a-ps5ribosomal protein L18A, pseudogene 562110843121109299Rat
41372126LOC120103480uncharacterized LOC12010348062111770921120267Rat
708575Dpy30dpy-30 histone methyltransferase complex regulatory subunit62112094721141720Rat
1309929Memo1mediator of cell motility 162114452521234363Rat
41157183Hmgb2-ps4high mobility group box 2, pseudogene 462135447221356273Rat
1586183Pym1-ps1PYM homolog 1, exon junction complex associated factor, pseudogene 162139209421394047Rat
621480Srd5a2steroid 5 alpha-reductase 262142622521465727Rat
41120104LOC120093428small nucleolar RNA SNORA4862148057021480717Rat
2323407Sf3b4-ps1splicing factor 3B subunit 4, pseudogene 162151423021515489Rat
62043Xdhxanthine dehydrogenase62153046321592172Rat
621762Ehd3EH-domain containing 362164086121665601Rat
40933028LOC120103483uncharacterized LOC12010348362167718321701385Rat
1310068Galnt14polypeptide N-acetylgalactosaminyltransferase 1462175603921977533Rat
1562682Capn13calpain 1362207184522166864Rat
1589005Fam241b-ps1family with sequence similarity 241 member B, pseudogene 162218320122184227Rat
7531265LOC102547438uncharacterized LOC10254743862221412822219472Rat
1565906Lclat1lysocardiolipin acyltransferase 162222893322373246Rat
41195560LOC120093473small nucleolar RNA SNORA1762229186222291977Rat
6488952LOC100912066uncharacterized LOC10091206662237331622421143Rat
11440644LOC108351184uncharacterized LOC10835118462253829522551745Rat
1584525LbhLBH regulator of WNT signaling pathway62256923822593056Rat
1309657Ypel5yippee-like 562265628422671741Rat
9094701LOC103692567uncharacterized LOC10369256762278448722840562Rat
628622AlkALK receptor tyrosine kinase62287965323599636Rat
11422410LOC108351183uncharacterized LOC10835118362289723523002084Rat
1359510Sfnl1stratifin like 162296515122966436Rat
11394189LOC108351180uncharacterized LOC10835118062338229823394542Rat
1311049Clip4CAP-GLY domain containing linker protein family, member 462359772923601000Rat
1311049Clip4CAP-GLY domain containing linker protein family, member 462361628023697625Rat
1311049Clip4CAP-GLY domain containing linker protein family, member 462371858023729231Rat
1304963Pcarephotoreceptor cilium actin regulator62374970023758424Rat
1310677Togaram2TOG array regulator of axonemal microtubules 262377097923828884Rat
1565005Wdr43WD repeat domain 4362384549923884846Rat
41351625Snord53bsmall nucleolar RNA, C/D box 53B62386066023860735Rat
40956032Snord53small nucleolar RNA, C/D box 5362386137723861454Rat
41332489Snord92small nucleolar RNA, C/D box 9262387062723870715Rat
11359993Trnac-gca30transfer RNA cysteine (anticodon GCA) 3062389874323898814Rat
621730Spdyaspeedy/RINGO cell cycle regulator family member A62390557423954926Rat
3376Ppp1cbprotein phosphatase 1 catalytic subunit beta62395881323992841Rat
621565Plb1phospholipase B162408705124227167Rat
41338793LOC120103485uncharacterized LOC12010348562409263424098070Rat
1597860Pym1-ps2PYM homolog 1, exon junction complex associated factor, pseudogene 262426322324276159Rat
2628Fosl2FOS like 2, AP-1 transcription factor subunit62429789824319219Rat
735111Babam2BRISC and BRCA1 A complex member 262436902124788416Rat
1310064Rbksribokinase62474765124824290Rat
2322809Mrpl33mitochondrial ribosomal protein L3362482580024833994Rat
7699142LOC102548914uncharacterized LOC10254891462489341324897027Rat
1307080Slc4a1apsolute carrier family 4 member 1 adaptor protein62490594124933651Rat
1562206Supt7lSPT7 like, STAGA complex subunit gamma62493394124944656Rat
1589985Gpn1GPN-loop GTPase 162494735024965025Rat
1560110Ccdc121coiled-coil domain containing 12162497084524973451Rat
1561526Zfp512zinc finger protein 51262497690325007913Rat
7513610Spata31h1SPATA31 subfamily H member 162502371825040928Rat
2671Gckrglucokinase regulator62504459225075834Rat
6496095Fndc4fibronectin type III domain containing 462507715525080812Rat
620744Ift172intraflagellar transport 17262508193325121271Rat
1596516Krtcap3keratinocyte associated protein 362512093825122522Rat
1589575Nrbp1nuclear receptor binding protein 162512263525133209Rat
628676Ppm1gprotein phosphatase, Mg2+/Mn2+ dependent, 1G62515355625173763Rat
1310456Zfp513zinc finger protein 51362517418125177442Rat
1306424Snx17sorting nexin 1762517752825183001Rat
620208Eif2b4eukaryotic translation initiation factor 2B subunit delta62518317725188832Rat
1560392Gtf3c2general transcription factor IIIC subunit 262519643925221338Rat
1310512Mpv17mitochondrial inner membrane protein MPV1762522166825236241Rat
3929Ucnurocortin62523812025238950Rat
1306453Trim54tripartite motif-containing 5462523934025258511Rat
1307426Dnajc5gDnaJ heat shock protein family (Hsp40) member C5 gamma62526008725264251Rat
1359689Slc30a3solute carrier family 30 member 362526431025284720Rat
1588606Cadcarbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase62529213325315078Rat
1311605Atraidall-trans retinoic acid-induced differentiation factor62531523625319821Rat
69648Slc5a6solute carrier family 5 member 662531918725331713Rat
1586500Tcf23transcription factor 2362539788925406639Rat
2315526Prr30proline rich 3062541506925417582Rat
61929Prebprolactin regulatory element binding62541880525422594Rat
1310988Abhd1abhydrolase domain containing 162542252625427514Rat
620801Cgref1cell growth regulator with EF hand domain 162543184625443853Rat
2966Khkketohexokinase62544529825455834Rat
1311209Emilin1elastin microfibril interfacer 162545597425463713Rat
2300150Ost4oligosaccharyltransferase complex subunit 4, non-catalytic62547125425472478Rat
1598311Agbl5AGBL carboxypeptidase 562547233325492173Rat
11476312Trnay-gua3transfer RNA tyrosine (anticodon GUA) 362549153925491627Rat
1311324Tmem214transmembrane protein 21462550157525510444Rat
1359297Mapre3microtubule-associated protein, RP/EB family, member 362551380025558876Rat
11517696LOC108351190uncharacterized LOC10835119062552514825527188Rat
11363564LOC108351187uncharacterized LOC10835118762555868925575141Rat
11489826LOC10835118660S ribosomal protein L37 pseudogene62556729625572674Rat
620467Dpysl5dihydropyrimidinase-like 562557510425659422Rat
40940627LOC120103488uncharacterized LOC12010348862559277325597636Rat
41105934LOC120093431small nucleolar RNA SNORA4862569824225698386Rat
1563607Cenpacentromere protein A62570014225711767Rat
1309228Slc35f6solute carrier family 35, member F662572582225737720Rat
61997Kcnk3potassium two pore domain channel subfamily K member 362576148725799153Rat
1584147Cib4calcium and integrin binding family member 462584260525903509Rat
1559683Cimip2cciliary microtubule inner protein 2C62590529425923615Rat
620646Otofotoferlin62592801826024631Rat
1359318Drc1dynein regulatory complex subunit 162602500426059438Rat
1560938Selenoiselenoprotein I62607312726111326Rat
41352920LOC120103489uncharacterized LOC12010348962611151226117344Rat
1305868Adgrf3adhesion G protein-coupled receptor F362613317626144601Rat
620513Hadhbhydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta62615357226187668Rat
620512Hadhahydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha62618796926227605Rat
1597138Garem2GRB2 associated regulator of MAPK1 subtype 262622896526255576Rat
40992611Rbbp4-ps4RB binding protein 4, chromatin remodeling factor, pseudogene 462624756526254076Rat
620879Rab10RAB10, member RAS oncogene family62626708126319739Rat
41285196LOC120103491uncharacterized LOC12010349162635020226357723Rat
621538Kif3ckinesin family member 3C62636709226406033Rat
41378379LOC120103492uncharacterized LOC12010349262640656226425702Rat
1304710Asxl2ASXL transcriptional regulator 262642501726514899Rat
9083598Rpusd4-ps1RNA pseudouridine synthase D4, pseudogene 162646679426470463Rat
1309579Dtnbdystrobrevin, beta62656641826763467Rat
41082100Btf3-ps5basic transcription factor 3, pseudogene 562661607626616536Rat
1303336Dnmt3aDNA methyltransferase 3 alpha62679151726902161Rat
41024468LOC120103494uncharacterized LOC12010349462683790626842773Rat
1565766Yipf4l1Yip1 domain family, member 4 like 162692360526924789Rat
3366Pomcproopiomelanocortin62693984426945666Rat
1310845Efr3bEFR3 homolog B62694743627021113Rat
41181501LOC120103495uncharacterized LOC12010349562697743626981215Rat
1564414Dnajc27DnaJ heat shock protein family (Hsp40) member C2762706871327098449Rat
41044806Cox7b-ps3cytochrome c oxidase subunit 7B, pseudogene 362709286427093103Rat
71009Adcy3adenylate cyclase 362710008927203686Rat
41355253LOC120103497general transcription factor IIH subunit 5-like62710920927114478Rat
1590328Cenpocentromere protein O62720364227218394Rat
1561792Ptrhd1peptidyl-tRNA hydrolase domain containing 162721841727221805Rat
1309046Ncoa1nuclear receptor coactivator 162723260927507992Rat
41192041Trnas-aga24transfer RNA serine (anticodon AGA) 2462736179227361866Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
33561D6Mit5175653450075345178Ratregion
36344D12Mit10121615766581576779Ratregion
37298D6Rat10521561872366018723879Ratregion
37410D6Rat10717961952217919522352Ratregion
37496D6Rat108150622993572299495Ratregion
37562D6Rat7714862266434522664497Ratregion
35411D6Rat5614461440416214404306Ratregion
35507D6Rat4317261995589919956076Ratregion
35541D6Rat47162638929043893050Ratregion
37000D6Rat18015561749359817493753Ratregion
37142D6Rat8024461653614016536392Ratregion
36737D6Rat4417361633650916336688Ratregion
34843D6Rat4014161653624316536392Ratregion
35134D6Rat4121062086642220866681Ratregion
35579D6Rat5415562295900922959164Ratregion
35647D6Rat5515561511882815118983Ratregion
35653D6Rat4214561998791119988050Ratregion
35683D6Rat3913862033877720338915Ratregion
35963D6Rat46144650744975074641Ratregion
39622D6Rat151149637570193757174Ratregion
39716D6Rat14915061089441510894565Ratregion
38006D6Rat6923161173566911735900Ratregion
40604D6Rat173171697117919711961Ratregion
40624D6Rat14824662089406520894315Ratregion
38562D6Rat8924262739266627392902Ratregion
38724D6Rat8622461952513319525367Ratregion
40004D6Rat15719962437076624370973Ratregion
40220D6Rat15617462694691626947057Ratregion
39124D6Rat6221761239404712394267Ratregion
39190D6Rat6827061510721615107485Ratregion
39342D6Rat7423962142019621420428Ratregion
39342D6Rat7423962142019621420428Ratregion
42771D6Rat213121661193736119470Ratregion
42772D6Rat211125682756558275790Ratregion
42775D6Rat214236693111249311366Ratregion
42776D6Rat20914962091964020919815Ratregion
42777D6Rat17246562095268420953163Ratregion
42778D6Rat17113862726160927261739Ratregion
42321D6Rat212249636511913651425Ratregion
42322D6Rat22524861077347210773714Ratregion
42323D6Rat22421361468813214688345Ratregion
41702D6Rat17924561667266516672914Ratregion
41726D6Rat17824962473073724730980Ratregion
44024D6Got715961700986017010021Ratregion
44025D6Got20418862092140320921591Ratregion
44027D6Got918561998301119983196Ratregion
44029D6Got1516362368006023680221Ratregion
44030D6Got1428362355769923557984Ratregion
44031D6Got1215362315328223153430Ratregion
44032D6Got139062379738623797474Ratregion
44035D6Got1720862587351625873721Ratregion
44038D6Got2129562737592027376215Ratregion
44039D6Got2217362730693527307104Ratregion
44040D6Got1815762747173227471889Ratregion
44040D6Got1815762747173227471889Ratregion
44041D6Got1915562598850625988661Ratregion
60525D6Got2025962618228926182548Ratregion
60530D6Got2515462712070527120860Ratregion
60537D6Got4294698927009892994Ratregion
60499D6Got1300690147189015016Ratregion
60516D6Got1613762671126926711406Ratregion
60811D6Wox16310679338907934206Ratregion
60813D6Wox9166699574839957643Ratregion
60521D6Got19426761095840010958664Ratregion
60522D6Got19512261382152013821642Ratregion
62493D6Uia216362674166526741829Ratregion
67772D5Uwm3141670179677018606Ratregion
1357998D6Rat150172698433129843484Ratregion
1630712D6Wox2921861325274413252962Ratregion
1631647D6Got5159662191856219344Ratregion
1631998D6Wox3022362640509226405315Ratregion
1632009D6Got322110670884517088561Ratregion
1632361D6Uia728761255442912554720Ratregion
1627594D6Got30217962635170026351879Ratregion
1627875D6Got31710762012853020128637Ratregion
1628301D6Got323161691113209111481Ratregion
1629518DXGot1422996319548319585Ratregion
1629641D6Got30011062025811520258220Ratregion
1640865D6Cebr3243674037467403989Ratregion
1640899D6Got329263652459515246214Ratregion
1641053D6Got30110162466795424668055Ratregion
1641537D6Wox3311862576342425763544Ratregion
1633593D6Wox32166668801906880356Ratregion
1632506D6Wox2361620233016202464Ratregion
7206054Kcmf146362436873124369194Ratregion
7206784G45646065775257959Ratregion
8693209rs6525683761125090411250904Ratregion
8693210rs65621565696634059663405Ratregion
8693211rs107435003659941905994190Ratregion
8693213rs106844876646224514622451Ratregion
7206276Six3257690399119040168Ratregion
7206276Six3257690399119041283Ratregion
7206276Six3257690401229040168Ratregion
5038808RH12734421462265636622656580Ratregion
7206626Six2893689779598978854Ratregion
5036302Ppm1g13362517358225173715Ratregion
5039224RH12758321761400471314004930Ratregion
5039018RH12746518262517701625177198Ratregion
5039150RH12754120461003051210030716Ratregion
5036845AU04939424961966319419663443Ratregion
5037201RH9203413262512054125120804Ratregion
5037207z381513461015032510150459Ratregion
5026038RH130666214697770769777290Ratregion
5028597MHAa84f4.seq17262255033222550504Ratregion
5028599AI44902330761461299614613303Ratregion
7205792RH4709611161142173211421843Ratregion
5031408PMC16288P112462576438825764512Ratregion
5031418AU04838817562092139420921569Ratregion
5034117RH141427215675815547581769Ratregion
5031572AU04788014562261203222612177Ratregion
5034263RH14197920461354752813547732Ratregion
5026362RH13191318062545609325456273Ratregion
5026402RH132068209698905279890736Ratregion
5028921RH14282721362483912624839339Ratregion
5034388D2S284024662521979825220044Ratregion
5034452BE11844419562681926626819461Ratregion
5026528RH13255920162396028623960488Ratregion
5029123RH14360812661481876214818888Ratregion
5034530BE119146186679639317964117Ratregion
5034640BI28155222062523593725236157Ratregion
5034808AI23317720562479272424792929Ratregion
5035104D2S270914761049391710494064Ratregion
5035156AI17610416962681923126819400Ratregion
5026978RH13425918362572585225726035Ratregion
5029667BI27777717462709813627098310Ratregion
5029715AW52393515662640610926406265Ratregion
5034882AA85055615162548027325480424Ratregion
5027593AW99038614162517710925177250Ratregion
5032893RH13687219862159219421592392Ratregion
5024970AU022874206611422391142445Ratregion
5025072RH126872185647329514733150Ratregion
5025152RH126790216665624266562642Ratregion
5030421BI288433179677917237791902Ratregion
5030465BF39782720562494504624945251Ratregion
8663474rs105186122061411238714112387Ratregion
8663483rs10686052261239373812393738Ratregion
8693417rs6488695762130198221301982Ratregion
5033501RH139060136686378578637993Ratregion
5025554RH12877015261613559716135749Ratregion
5025690RH129283182677902957790477Ratregion
5025760RH12955518062114141621141596Ratregion
5028318D10S1559125620026592002784Ratregion
5028318D10S1559125620026592002784Ratregion
5030891BI30212422062642161726421837Ratregion
5033737RH13993418761463479514634982Ratregion
5033843RH14032412161156328111563402Ratregion
5025900RH13013119862218390622184110Ratregion
5031123BF40656413062548369125483821Ratregion
5031199RH10300214461518016315180307Ratregion
5051995RH9477910662504512725045233Ratregion
5055041RH14357122461105167011051894Ratregion
5051154RH13447020161669440716694608Ratregion
5051589AI64401910161121974211219843Ratregion
5051591AW550279114665632116563325Ratregion
5054199RH14308711762508413325084250Ratregion
5057372AA80024517762523945925240021Ratregion
5059502BE09710720062480080524801005Ratregion
5055603RH143896126690422099042335Ratregion
5055787RH14400210761496781314967920Ratregion
5055129RH143622287611423761142663Ratregion
5058784BF39367210962368714723687256Ratregion
5058784BF39367210962371866723718776Ratregion
5056127RH14419810261689541916895521Ratregion
5056581RH14446126562378171423781980Ratregion
5056477RH14440126762084540020845667Ratregion
5057005UniSTS:23920864761327125413271901Ratregion
5055333RH14374117462112603421126208Ratregion
5059032BF39395416762628538626285553Ratregion
5059794BE09788916361455972714559890Ratregion
5055681RH14394110062690052726900627Ratregion
505218318.MMHAP91FRF9.seq18561453304714533232Ratregion
5059124BE10288716162622904126229202Ratregion
5050148RH13388918261989565119895833Ratregion
5053259RH14254510162240607722406178Ratregion
5059358BG37763524062690183726902077Ratregion
5057644BI28335620562626720026267405Ratregion
5053819RH142869117686378778637994Ratregion
5053849RH14288621362495056024950773Ratregion
5050074RH13384721562360850623608721Ratregion
5050256RH13395119962429862224298821Ratregion
5050388RH13402821861669592816696147Ratregion
5051148RH134467206658433265843532Ratregion
5054589RH14331110662570467125704777Ratregion
5054621RH14332913861579520915795347Ratregion
5054645RH14334311662619880926199470Ratregion
5054673RH143359149641894404189589Ratregion
5041604RH12895218361353511313535296Ratregion
5044020RH13036420161048767910487880Ratregion
5043308RH12995119861408159714081795Ratregion
5043418RH13001419461086704410867238Ratregion
5043474RH13004618262490596124906143Ratregion
5044708RH13075820762694532726945534Ratregion
5044870RH13085119162413317124133362Ratregion
5043828RH13025120762533145025331657Ratregion
5044936RH13088918461394726413947448Ratregion
5045054RH13095618062171190821712088Ratregion
5045440RH13117918462522029525220479Ratregion
5041606RH1289541856488957489142Ratregion
5043858RH13026820062436912424369324Ratregion
5041760RH12904320762384554423845751Ratregion
5044862RH13084620261159177711591979Ratregion
5046476RH13177519061515555715155747Ratregion
5046552RH131819187670057727005959Ratregion
5046556RH13182119661440350814403704Ratregion
5046566RH13182719862512097025121255Ratregion
5045156RH131016210672326587232868Ratregion
5048882RH133160215690395609039784Ratregion
5045604RH13127318061610864516108825Ratregion
5047752RH13250820862489670524896913Ratregion
5046694RH13190121662359289023593106Ratregion
5049132RH13330418161570916815709349Ratregion
5048176RH132752206696083289608534Ratregion
5049452RH13348918362507995925080142Ratregion
5049466RH13349718262392169023921872Ratregion
5047076RH13212015061397641213976562Ratregion
5049806RH13369221462375806423758278Ratregion
5039344RH12765218061444572314445903Ratregion
5039520RH127753208665632046563911Ratregion
5039556RH127773217671594097159626Ratregion
5041952RH12915321461171217411712388Ratregion
5042102RH12924119462482582824826022Ratregion
5048532RH132957187682320998232286Ratregion
5048586RH13298919862105493621055134Ratregion
5048600RH132997181675866027586783Ratregion
5049506RH133520200679648917965091Ratregion
5040098RH12808821661596496715965183Ratregion
5039546RH12776720362123962321239826Ratregion
5042132RH12925818562482582824826013Ratregion
5043132RH12985020061483776714837966Ratregion
5042398RH12941118062606869626068876Ratregion
5042434RH12943218262504512725045309Ratregion
5040814RH12849818462622750826227692Ratregion
5040112RH12809618161082961910829800Ratregion
5041034RH12862521661500019615000412Ratregion
5041038RH128627208672855517285759Ratregion
5041038RH128627208672855517285759Ratregion
5041124RH12867618162722127027221451Ratregion
5043852RH13026519062055879120558981Ratregion
5043120RH12984318061610808016108260Ratregion
5072656RH13697615162542240325422554Ratregion
5075206RH138460249657249135725162Ratregion
5071984RH13539818462492106124921245Ratregion
5073930RH13772124962735538827355637Ratregion
5074006RH137765150671069347107084Ratregion
5075566RH138667146675822277582373Ratregion
5074256RH13791116261612715116127313Ratregion
5076452RH13918416062607262626072786Ratregion
5072570RH136925166691990289199194Ratregion
5075248RH13848417362547493825475111Ratregion
5076712RH13933521261572188215722094Ratregion
5076820RH1393979362105565321055746Ratregion
5076980RH13949018961156337611563565Ratregion
5075542RH13865419362497794224978135Ratregion
5075886RH13885315861018532510185483Ratregion
5074750RH13819714362319809523198238Ratregion
5080678RH14171820262494757524947777Ratregion
5077232RH13963819262399156923991761Ratregion
5076054RH138952166690533119053477Ratregion
5075174RH13844122961122051111220740Ratregion
5077644RH13987518561461268714612872Ratregion
5077672RH13989119861535023415350432Ratregion
5079514RH14104218762395942123959608Ratregion
5076738RH13935018062395883023959010Ratregion
5076276RH139082183696096769609859Ratregion
5079576RH14108021961573099915731218Ratregion
5077972RH14006715061126948911269639Ratregion
5077642RH13987420362549982325500026Ratregion
5078398RH14031913561492651214926647Ratregion
5079758RH14118618161544107215441253Ratregion
5079808RH141215205696537489653953Ratregion
5077710RH13991320661537928115379487Ratregion
5078718RH140511180665622266562406Ratregion
5079904RH14127019262164051021640702Ratregion
5079990RH14131918262163951321639695Ratregion
5080042RH14134918462002985420030038Ratregion
5080188RH14143615062570488025705030Ratregion
5080214RH14145018561049260710492792Ratregion
5079120RH14074714662642607626426222Ratregion
5070604RH13459719562720376927203964Ratregion
5070662RH13463218562615371226153897Ratregion
5070682RH13464321562512027125120763Ratregion
5070860RH13474721262518859425188806Ratregion
5072944RH13714418462528452125284705Ratregion
5073112RH13724519761632297016323167Ratregion
5079268RH140883197681817638181960Ratregion
5070956RH13480318261460984814610030Ratregion
5080428RH141573180695353889535568Ratregion
5078710RH1405059162399166123991752Ratregion
5071548RH13514619962527047825270677Ratregion
5071612RH13518321062689611826896328Ratregion
5073920RH13771512761471088414711011Ratregion
5070866RH13475018362488069024880873Ratregion
5074178RH13786612061457863014578750Ratregion
5072222RH13672413362359741323597546Ratregion
5072292RH1367646462240610822406172Ratregion
5072454RH13685918462522058025220764Ratregion
5074830RH13824313462391028623910420Ratregion
5071704RH13523619562430747024307665Ratregion
5063330BF40410717761010410110104278Ratregion
5065066BF40560810062669681226696912Ratregion
5066716AU04819315062313782023137970Ratregion
5067012AU048017231697470839747314Ratregion
5067118AU04795229261437191514372207Ratregion
8693335rs10743921461753252117532521Ratregion
8693336rs10759243562401195224011952Ratregion
8693337rs13452788679641677964167Ratregion
5067700AU04758815961272519912725358Ratregion
5067848AU04749923361932995619330189Ratregion
5068346AU04720213162202377222023903Ratregion
5068434AU04714715261810055618100708Ratregion
5069460AU04648220361137897611379174Ratregion
5070141RH9449616262693938926939551Ratregion
5069568AU04640917462726159727261766Ratregion
5069576AU046405235651976955197930Ratregion
5069642AU04636523361441773514417963Ratregion
5070356AW04520113462544346225443596Ratregion
5069268AU04660824861018346510183541Ratregion
5069268AU04660824862232259422322670Ratregion
5069344AU04655814961583532115835465Ratregion
5063516BF40430610262122176221221864Ratregion
5063678BE10795916762700765727007824Ratregion
5063742BF4049579862700839627008494Ratregion
5065302AI5351369262619149526191587Ratregion
5065728BE10972915362521956625219719Ratregion
5062734AW53413617062390006123900231Ratregion
5062738AW534145181676521167652296Ratregion
5065832AI04525214962570459725704746Ratregion
5065950AA92506415762123407121234228Ratregion
5061956BI29444418062534875825348938Ratregion
5062030BE112607160697063729706532Ratregion
5062048BE11269316962570341525703584Ratregion
5063536BF40432319062642574526425935Ratregion
5063812AW535278154696108139610967Ratregion
5060576BE11042320662522400125224207Ratregion
5064106BE12061618462145645121456635Ratregion
5060708BE10434315662681283826812994Ratregion
5064358BI30208617162449305824493229Ratregion
5064428BI30219017961815036618150545Ratregion
5061052BG37903713562548471625484851Ratregion
5066112BE11686722562694769826947923Ratregion
5066156BF41366019462517626625176460Ratregion
5061292BE11148315962570022025700379Ratregion
5063048BE11364116162687059826870759Ratregion
5064666BF39953816962642559926425768Ratregion
5066354PMC16288P236962576414325764512Ratregion
5061438BE11176115162222899422229145Ratregion
5063304BF39871716962688090926881078Ratregion
5066576AU0482751966241287241464Ratregion
5061574BF39672319162690129126901482Ratregion
5087480PMC20271P163761327135513271992Ratregion
5082395BE11930315762609273826092895Ratregion
5087386BM38968015062498268124982831Ratregion
5087400FSHR304654059975406301Ratregion
5087854AA437972136617147601714896Ratregion
5088979AU0488822126939324939536Ratregion
5083135BF39083721061620410116204311Ratregion
5083185BF39094819862640851026408708Ratregion
5083477AI5473939162541941325419504Ratregion
5083493BE10025521462618726826187482Ratregion
5083593BE10078211162002978220029893Ratregion
5083635BE10094315162438919524389346Ratregion
5088615AU04867520062631399026314190Ratregion
5081713BF40848723362416210124162334Ratregion
5080838RH14181220261142135511421686Ratregion
5080838RH14181220261142148311421686Ratregion
5080954RH14187915062640746826407618Ratregion
5081160RH14199919861354703213547230Ratregion
5085756BQ19873120362542596425426167Ratregion
5089995AU049487117698062139806359Ratregion
5082563BE11971015062494387324944023Ratregion
5086040Cgr1119262544348025443672Ratregion
5082789BF39011520262359939823599600Ratregion
5082985BF39057416962700469127004860Ratregion
5086351AA850129185620035552003740Ratregion
5081162RH142000190632054903205680Ratregion
5081214RH14203019762408926124089458Ratregion
5081218RH142033218679622607962478Ratregion
5086671AI41257815962436339324363552Ratregion
5086703BE11529515362755683127556984Ratregion
5086805AA89266618861483801914838207Ratregion
5507543G4034825661015020110150457Ratregion
5502965LHCGR493657229565723449Ratregion
5503274UniSTS:23769822561988832719888552Ratregion
5503494Cyp1b184861534314515343993Ratregion
5503835PPM1G_785753362517319725173730Ratregion
5504242AL0336301293679727927974085Ratregion
5504266G4353714261518019215180334Ratregion
5504280D2S1690E124961458809414589343Ratregion
5504312D12S1229E12362622417626224299Ratregion
5504823ha21804261212300512123047Ratregion
5505261Hnrnpf32561614537516145698Ratregion
5505492PCU64649100661791096217911968Ratregion
5505905UniSTS:49603872162718620427186925Ratregion
5505907UniSTS:4960359162517209725172188Ratregion
5506336MARC_49992-49993:1124119588:2062542128425421642Ratregion
5506389UniSTS:479086539611422171142756Ratregion
5506344UniSTS:47890414262566010825660250Ratregion
5506519ADCY3_103481962720279627203615Ratregion
5506229Epas195678178407817935Ratregion
5506431Sfrs784161481306614814241Ratregion
5506835G4642623761479903214799269Ratregion
5506927G5411416462517343825173602Ratregion
5506569RAB10_104588262626683826267720Ratregion
5507225G65690218690391739039391Ratregion
5507249AI6395808362709809327098176Ratregion
5500583RH13607319561499973114999926Ratregion
5500202G6700149461262923912629733Ratregion
5500505RH12659020162128221821282416Ratregion
5500695RH8059223162723462727234858Ratregion
5500459MARC4015-4016062529339225293827Ratregion
5500509RH12691424962114139521141644Ratregion
5503278UniSTS:23771323261453283514533067Ratregion
5503284UniSTS:237721230691989769199206Ratregion
5503376Slc8a160561327159013272195Ratregion
5501237PMC16375P146861429792814298396Ratregion
5501558D11S41871378657484875749863Ratregion
5501564emaa29561362228513622580Ratregion
5501736MARC_10279-10280:998924900:1100462675511826756122Ratregion
5501878MARC_16687-16688:1017861800:124862523163725232402Ratregion
5502002MARC_23457-23458:1027109061:146862547283525473303Ratregion
5502026MARC_24055-24056:1030023107:114762512425125124609Ratregion
5502694Emilin1131262546011125461423Ratregion
Position Markers

Peak: (D6Rat46)
Rat AssemblyChrPosition (strand)Source
mRatBN7.265,074,497 - 5,074,641 (-)MAPPER
Rnor_6.0613,122,958 - 13,123,101NCBI
Rnor_5.0623,080,221 - 23,080,364UniSTS
RGSC_v3.4613,286,615 - 13,286,759RGD
RGSC_v3.4613,286,616 - 13,286,759UniSTS
RGSC_v3.1613,286,615 - 13,286,759RGD
Celera64,866,677 - 4,866,820UniSTS
SHRSP x BN Map61.1499UniSTS
SHRSP x BN Map61.1499RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
8693699Alc37Alcohol consumption QTL 372.60.224drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)6796416721301982Rat
8693645Alc31Alcohol consumption QTL 313.70.038drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)61753252124011952Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
2293706Bmd20Bone mineral density QTL 204.30.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)6507449719988050Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
2292616Ept15Estrogen-induced pituitary tumorigenesis QTL 154.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6984331220338915Rat
738023Alc17Alcohol consumption QTL 173.10.003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)6127574569Rat
1354616Despr12Despair related QTL 120.0012locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)6127574569Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
2300176Bmd51Bone mineral density QTL 5111.70.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)6127574569Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449734434305Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62033877762613667Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
1358190Ept1Estrogen-induced pituitary tumorigenesis QTL 14.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6984331220338915Rat
1359023Bp272Blood pressure QTL 2722.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)61653614027261739Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)61653614071636405Rat
2300190Bmd52Bone mineral density QTL 5211.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)6127574569Rat
8693690Alc35Alcohol consumption QTL 352.20.606drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)6796416721301982Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Alc17

RGD Curation Notes
Note Type Note Reference
qtl_cross_pair WKYxHEP  
qtl_cross_type intercross  
qtl_general no apparent influence of sex or sex-genotype interaction 731213
qtl_map same locus also maps a suggestive QTL for consumption of 7.5 mM saccharine (Sach5, LOD = 3.9) 731213