Trim54 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 6 | 30,959,306 - 30,978,475 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 6 | 25,239,340 - 25,258,511 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 6 | 25,239,340 - 25,258,511 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 6 | 25,540,163 - 25,559,346 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 6 | 25,856,057 - 25,875,204 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 6 | 25,334,941 - 25,354,308 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 6 | 26,603,364 - 26,623,950 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 6 | 26,603,369 - 26,624,092 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 6 | 36,419,744 - 36,439,076 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 6 | 25,218,008 - 25,237,575 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 6 | 25,220,960 - 25,240,528 (-) | NCBI | | | | | Celera | 6 | 24,730,464 - 24,749,611 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | q14 | NCBI | | | | |
|
TRIM54 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 2 | 27,282,429 - 27,307,435 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 27,282,429 - 27,307,439 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 27,505,297 - 27,530,303 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 27,359,104 - 27,383,811 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 27,417,250 - 27,441,957 | NCBI | | | | | Celera | 2 | 27,351,621 - 27,377,411 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | p23.3 | NCBI | | | | | HuRef | 2 | 27,247,000 - 27,272,529 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 27,435,215 - 27,460,253 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 27,322,074 - 27,349,850 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Trim54 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 5 | 31,273,956 - 31,294,970 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 31,274,056 - 31,294,974 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 31,116,612 - 31,137,626 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 31,116,712 - 31,137,630 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 31,418,985 - 31,439,999 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 31,393,293 - 31,414,207 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 28,595,527 - 28,616,535 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | B1 | NCBI | | | | | cM Map | 5 | 17.06 | NCBI | | | | |
|
Trim54 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955469 | 9,258,946 - 9,277,275 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955469 | 9,258,946 - 9,277,275 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
TRIM54 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 12 | 99,205,024 - 99,234,825 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2A | 99,208,992 - 99,238,793 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2A | 27,281,950 - 27,309,495 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2A | 27,370,903 - 27,397,214 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 2A | 27,370,903 - 27,397,214 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
TRIM54 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 17 | 21,257,660 - 21,278,410 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 17 | 21,257,706 - 21,278,274 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 17 | 21,149,470 - 21,170,217 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 17 | 21,578,911 - 21,599,695 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 17 | 21,578,929 - 21,599,695 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 17 | 21,265,637 - 21,286,390 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 17 | 21,276,455 - 21,295,890 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 17 | 21,323,359 - 21,344,115 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Trim54 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024406292 | 65,560,242 - 65,578,438 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936493 | 5,256,282 - 5,279,022 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936493 | 5,261,127 - 5,279,040 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
TRIM54 (Sus scrofa - pig) |
|
TRIM54 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 14 | 80,305,297 - 80,330,844 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 14 | 80,305,727 - 80,330,063 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666045 | 31,821,234 - 31,847,093 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Trim54 (Heterocephalus glaber - naked mole-rat) |
|