Cox7a2l (cytochrome c oxidase subunit 7A2 like) - Rat Genome Database

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Gene: Cox7a2l (cytochrome c oxidase subunit 7A2 like) Rattus norvegicus
Analyze
Symbol: Cox7a2l
Name: cytochrome c oxidase subunit 7A2 like
RGD ID: 1306111
Description: Predicted to be involved in mitochondrial respirasome assembly and regulation of oxidative phosphorylation. Predicted to be located in mitochondrion and nucleolus. Predicted to be part of mitochondrial respirasome. Orthologous to human COX7A2L (cytochrome c oxidase subunit 7A2 like); PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: cytochrome c oxidase subunit VIIa polypeptide 2 like; LOC298762
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8616,936,574 - 16,950,797 (+)NCBIGRCr8
mRatBN7.2611,184,064 - 11,198,287 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl611,184,285 - 11,198,273 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx611,478,130 - 11,492,350 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0611,787,460 - 11,801,680 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0611,300,814 - 11,315,039 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.066,695,807 - 6,709,790 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl66,695,827 - 6,709,783 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.066,650,352 - 6,664,329 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.466,834,523 - 6,861,652 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.166,835,178 - 6,861,594 (-)NCBI
Celera610,889,441 - 10,903,386 (+)NCBICelera
Cytogenetic Map6q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:14651853   PMID:18614015   PMID:23812712   PMID:23857330  


Genomics

Comparative Map Data
Cox7a2l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8616,936,574 - 16,950,797 (+)NCBIGRCr8
mRatBN7.2611,184,064 - 11,198,287 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl611,184,285 - 11,198,273 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx611,478,130 - 11,492,350 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0611,787,460 - 11,801,680 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0611,300,814 - 11,315,039 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.066,695,807 - 6,709,790 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl66,695,827 - 6,709,783 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.066,650,352 - 6,664,329 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.466,834,523 - 6,861,652 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.166,835,178 - 6,861,594 (-)NCBI
Celera610,889,441 - 10,903,386 (+)NCBICelera
Cytogenetic Map6q12NCBI
COX7A2L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38242,335,559 - 42,368,957 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl242,333,546 - 42,425,088 (-)EnsemblGRCh38hg38GRCh38
GRCh37242,562,699 - 42,596,097 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36242,431,146 - 42,441,860 (-)NCBINCBI36Build 36hg18NCBI36
Build 34242,489,297 - 42,500,007NCBI
Celera242,417,924 - 42,428,640 (-)NCBICelera
Cytogenetic Map2p21NCBI
HuRef242,312,008 - 42,322,727 (-)NCBIHuRef
CHM1_1242,507,075 - 42,517,803 (-)NCBICHM1_1
T2T-CHM13v2.0242,340,963 - 42,374,398 (-)NCBIT2T-CHM13v2.0
Cox7a2l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391783,809,346 - 83,821,762 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1783,809,347 - 83,824,759 (-)EnsemblGRCm39 Ensembl
GRCm381783,501,917 - 83,514,333 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1783,501,918 - 83,517,330 (-)EnsemblGRCm38mm10GRCm38
MGSCv371783,901,257 - 83,913,673 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361783,410,257 - 83,422,627 (-)NCBIMGSCv36mm8
Celera1787,843,482 - 87,856,037 (-)NCBICelera
Cytogenetic Map17E4NCBI
cM Map1753.02NCBI
LOC102015775
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554419,733,894 - 9,743,354 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554419,732,168 - 9,743,052 (-)NCBIChiLan1.0ChiLan1.0
LOC100968761
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21284,046,260 - 84,059,874 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A84,050,233 - 84,063,841 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A42,447,387 - 42,461,792 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A43,299,759 - 43,319,617 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A43,299,759 - 43,319,617 (-)Ensemblpanpan1.1panPan2
COX7A2L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11733,954,882 - 33,976,749 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1733,955,118 - 33,976,699 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1733,724,532 - 33,746,618 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01734,722,422 - 34,744,550 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1734,722,441 - 34,744,511 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11733,847,446 - 33,869,523 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01733,909,770 - 33,931,814 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01734,127,318 - 34,149,512 (-)NCBIUU_Cfam_GSD_1.0
LOC101958099
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629237,851,353 - 37,858,670 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365089,279,974 - 9,287,279 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COX7A2L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl397,951,114 - 97,983,309 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1397,951,115 - 97,983,309 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23104,086,468 - 104,118,648 (+)NCBISscrofa10.2Sscrofa10.2susScr3
COX7A2L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11464,895,317 - 64,909,162 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604546,995,153 - 47,008,572 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
LOC101716432
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473823,975,788 - 24,066,011 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473824,058,426 - 24,065,764 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cox7a2l
114 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:103
Count of miRNA genes:86
Interacting mature miRNAs:96
Transcripts:ENSRNOT00000065464
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738023Alc17Alcohol consumption QTL 173.10.003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)6127574569Rat
1354616Despr12Despair related QTL 120.0012locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)6127574569Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
2300176Bmd51Bone mineral density QTL 5111.70.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)6127574569Rat
2300190Bmd52Bone mineral density QTL 5211.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)6127574569Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
2293706Bmd20Bone mineral density QTL 204.30.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)6507449719988050Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449734434305Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
1358190Ept1Estrogen-induced pituitary tumorigenesis QTL 14.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6984331220338915Rat
2292616Ept15Estrogen-induced pituitary tumorigenesis QTL 154.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6984331220338915Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 35 41 11 8
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001106704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001399341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_174177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_174178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_174179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_174180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_174181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC112092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC166896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ213890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ220707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000065464   ⟹   ENSRNOP00000063344
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl611,184,311 - 11,198,273 (+)Ensembl
Rnor_6.0 Ensembl66,695,827 - 6,709,783 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000095241   ⟹   ENSRNOP00000090089
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl611,184,285 - 11,197,617 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000105892   ⟹   ENSRNOP00000088968
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl611,184,302 - 11,198,272 (+)Ensembl
RefSeq Acc Id: NM_001106704   ⟹   NP_001100174
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8616,936,795 - 16,950,797 (+)NCBI
mRatBN7.2611,184,285 - 11,198,287 (+)NCBI
Rnor_6.066,695,821 - 6,709,783 (-)NCBI
Rnor_5.066,650,352 - 6,664,329 (-)NCBI
RGSC_v3.466,834,523 - 6,861,652 (-)RGD
Celera610,889,441 - 10,903,386 (+)RGD
Sequence:
RefSeq Acc Id: NM_001399338   ⟹   NP_001386267
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8616,936,795 - 16,950,797 (+)NCBI
mRatBN7.2611,184,285 - 11,198,287 (+)NCBI
RefSeq Acc Id: NM_001399340   ⟹   NP_001386269
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8616,936,795 - 16,950,797 (+)NCBI
mRatBN7.2611,184,285 - 11,198,287 (+)NCBI
RefSeq Acc Id: NM_001399341   ⟹   NP_001386270
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8616,936,795 - 16,950,797 (+)NCBI
mRatBN7.2611,184,285 - 11,198,287 (+)NCBI
RefSeq Acc Id: NR_174177
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8616,936,795 - 16,950,797 (+)NCBI
mRatBN7.2611,184,285 - 11,198,287 (+)NCBI
RefSeq Acc Id: NR_174178
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8616,936,574 - 16,950,797 (+)NCBI
mRatBN7.2611,184,064 - 11,198,287 (+)NCBI
RefSeq Acc Id: NR_174179
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8616,936,795 - 16,950,797 (+)NCBI
mRatBN7.2611,184,285 - 11,198,287 (+)NCBI
RefSeq Acc Id: NR_174180
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8616,936,795 - 16,950,797 (+)NCBI
mRatBN7.2611,184,285 - 11,198,287 (+)NCBI
RefSeq Acc Id: NR_174181
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8616,936,795 - 16,950,797 (+)NCBI
mRatBN7.2611,184,285 - 11,198,287 (+)NCBI
RefSeq Acc Id: NP_001100174   ⟸   NM_001106704
- Peptide Label: isoform 1
- UniProtKB: D3ZYX8 (UniProtKB/TrEMBL),   A6H9M6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000063344   ⟸   ENSRNOT00000065464
RefSeq Acc Id: ENSRNOP00000088968   ⟸   ENSRNOT00000105892
RefSeq Acc Id: ENSRNOP00000090089   ⟸   ENSRNOT00000095241
RefSeq Acc Id: NP_001386267   ⟸   NM_001399338
- Peptide Label: isoform 2
- UniProtKB: A0A8I6GHX2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001386269   ⟸   NM_001399340
- Peptide Label: isoform 3
- UniProtKB: B2RYT5 (UniProtKB/TrEMBL),   A0A8I6AAY1 (UniProtKB/TrEMBL),   A0A8I6GHX2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001386270   ⟸   NM_001399341
- Peptide Label: isoform 4
- UniProtKB: A0A8I6AAY1 (UniProtKB/TrEMBL),   A0A8I6GHX2 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZYX8-F1-model_v2 AlphaFold D3ZYX8 1-120 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694370
Promoter ID:EPDNEW_R4895
Type:multiple initiation site
Name:Cox7a2l_1
Description:cytochrome c oxidase subunit 7A2 like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.066,709,779 - 6,709,839EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306111 AgrOrtholog
BioCyc Gene G2FUF-38610 BioCyc
BioCyc Pathway PWY-3781 [aerobic respiration I (cytochrome c)] BioCyc
  PWY-7279 [aerobic respiration II (cytochrome c) (yeast)] BioCyc
BioCyc Pathway Image PWY-3781 BioCyc
  PWY-7279 BioCyc
Ensembl Genes ENSRNOG00000004526 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000065464 ENTREZGENE
  ENSRNOT00000065464.3 UniProtKB/TrEMBL
  ENSRNOT00000095241.1 UniProtKB/TrEMBL
  ENSRNOT00000105892 ENTREZGENE
  ENSRNOT00000105892.1 UniProtKB/TrEMBL
Gene3D-CATH 4.10.91.10 UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:6921504 IMAGE-MGC_LOAD
InterPro COX7a UniProtKB/TrEMBL
  Cyt_c_oxidase_su7a UniProtKB/TrEMBL
  Cyt_c_oxidase_su7a-rel_mt UniProtKB/TrEMBL
  Cyt_c_oxidase_su7a_sf UniProtKB/TrEMBL
KEGG Report rno:298762 UniProtKB/TrEMBL
MGC_CLONE MGC:188853 IMAGE-MGC_LOAD
NCBI Gene 298762 ENTREZGENE
PANTHER COX7a UniProtKB/TrEMBL
  PTHR10510:SF2 UniProtKB/TrEMBL
Pfam COX7a UniProtKB/TrEMBL
PhenoGen Cox7a2l PhenoGen
PIRSF COX7A-rel_mt UniProtKB/TrEMBL
RatGTEx ENSRNOG00000004526 RatGTEx
Superfamily-SCOP Cyt_c_oxidase_7a_su UniProtKB/TrEMBL
UniProt A0A8I6AAY1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GHX2 ENTREZGENE, UniProtKB/TrEMBL
  A6H9M6 ENTREZGENE, UniProtKB/TrEMBL
  B2RYT5 ENTREZGENE, UniProtKB/TrEMBL
  D3ZYX8 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-17 Cox7a2l  cytochrome c oxidase subunit 7A2 like  Cox7a2l  cytochrome c oxidase subunit VIIa polypeptide 2 like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Cox7a2l  cytochrome c oxidase subunit VIIa polypeptide 2 like   Cox7a2l_predicted  cytochrome c oxidase subunit VIIa polypeptide 2 like (predicted)  'predicted' is removed 2292626 APPROVED