Gene: Fam166c (family with sequence similarity 166 member C) Rattus norvegicus
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Symbol:
Fam166c
Name:
family with sequence similarity 166 member C
RGD ID:
1559683
Description:
Orthologous to human FAM166C (family with sequence similarity 166 member C); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; copper atom.
Type:
protein-coding
RefSeq Status:
PREDICTED
Also known as:
hypothetical protein LOC500620; LOC500620; RGD1559683; similar to RIKEN cDNA 1700001C02; uncharacterized protein LOC500620; UPF0573 protein C2orf70 homolog
RGD Orthologs
Alliance Genes
More Info
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More Info
Species
Gene symbol and name
Data Source
Assertion derived from
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Orthologs 1
Homo sapiens (human):
FAM166C (family with sequence similarity 166 member C)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):
Fam166c (family with sequence similarity 166, member C)
HGNC
Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, PhylomeDB, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):
Fam166c (family with sequence similarity 166 member C)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
FAM166C (family with sequence similarity 166 member C)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
FAM166C (family with sequence similarity 166 member C)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Fam166c (family with sequence similarity 166 member C)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
FAM166C (family with sequence similarity 166 member C)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):
FAM166C (family with sequence similarity 166 member C)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Fam166c (family with sequence similarity 166 member C)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
FAM166C (family with sequence similarity 166 member C)
Alliance
DIOPT (HGNC|TreeFam)
Latest Assembly:
Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Rnor_6.0 6 27,305,402 - 27,323,992 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 6 27,305,402 - 27,323,992 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 6 37,117,774 - 37,136,364 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 6 25,889,215 - 25,908,084 (-) NCBI RGSC3.4 rn4 RGSC3.4 Celera 6 25,383,869 - 25,401,938 (-) NCBI Celera Cytogenetic Map 6 q14 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
References
Additional References at PubMed
Genomics
Comparative Map Data
Fam166c (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Rnor_6.0 6 27,305,402 - 27,323,992 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 6 27,305,402 - 27,323,992 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 6 37,117,774 - 37,136,364 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 6 25,889,215 - 25,908,084 (-) NCBI RGSC3.4 rn4 RGSC3.4 Celera 6 25,383,869 - 25,401,938 (-) NCBI Celera Cytogenetic Map 6 q14 NCBI
FAM166C (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38.p13 Ensembl 2 26,562,585 - 26,579,532 (+) Ensembl GRCh38 hg38 GRCh38 GRCh38 2 26,562,565 - 26,581,166 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh37 2 26,785,427 - 26,802,395 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 2 26,638,985 - 26,655,899 (+) NCBI NCBI36 hg18 NCBI36 Celera 2 26,629,117 - 26,646,026 (+) NCBI Cytogenetic Map 2 p23.3 NCBI HuRef 2 26,524,922 - 26,541,831 (+) NCBI HuRef CHM1_1 2 26,715,479 - 26,732,449 (+) NCBI CHM1_1
Fam166c (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 30,623,373 - 30,641,433 (+) NCBI GRCm39 mm39 GRCm38 5 30,466,029 - 30,484,089 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 30,466,047 - 30,484,088 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 30,768,450 - 30,786,460 (+) NCBI GRCm37 mm9 NCBIm37 MGSCv36 5 30,742,658 - 30,760,668 (+) NCBI mm8 Celera 5 27,944,260 - 27,962,270 (+) NCBI Celera Cytogenetic Map 5 B1 NCBI
Fam166c (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955469 8,588,900 - 8,604,337 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955469 8,588,820 - 8,603,333 (+) NCBI ChiLan1.0 ChiLan1.0
FAM166C (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl PanPan1.1 2A 26,651,265 - 26,668,192 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 2A 26,651,283 - 26,668,192 (+) Ensembl panpan1.1 panPan2 Mhudiblu_PPA_v0 2A 26,558,826 - 26,578,005 (+) NCBI Mhudiblu_PPA_v0 panPan3
FAM166C (Canis lupus familiaris - dog)
Fam166c (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
FAM166C (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 112,458,914 - 112,474,438 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 112,458,914 - 112,474,431 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 119,458,324 - 119,473,737 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
FAM166C (Chlorocebus sabaeus - African green monkey)
Vervet Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 14 81,059,408 - 81,077,554 (-) NCBI ChlSab1.1 Ensembl 14 81,057,764 - 81,076,400 (-) Ensembl
Fam166c (Heterocephalus glaber - naked mole-rat)
Molerat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HetGla 1.0 NW_004624738 8,702,652 - 8,716,962 (+) NCBI
QTLs in Region (Rnor_6.0)
738023 Alc17 Alcohol consumption QTL 17 3.1 0.003 consumption behavior trait (VT:0002069) ethanol drink intake rate to body weight ratio (CMO:0001616) 6 1 35623029 Rat 1354616 Despr12 Despair related QTL 12 0.0012 locomotor behavior trait (VT:0001392) amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) 6 1 35623029 Rat 1549905 Stresp10 Stress response QTL 10 6.83 0.0066 stress-related behavior trait (VT:0010451) number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960) 6 1 35623029 Rat 2300176 Bmd51 Bone mineral density QTL 51 11.7 0.0001 femur mineral mass (VT:0010011) bone mineral density (CMO:0001226) 6 1 35623029 Rat 2300190 Bmd52 Bone mineral density QTL 52 11.2 0.0001 femur mineral mass (VT:0010011) volumetric bone mineral density (CMO:0001553) 6 1 35623029 Rat 1331743 Uae28 Urinary albumin excretion QTL 28 4.5 urine albumin amount (VT:0002871) urine albumin level (CMO:0000130) 6 1 41917988 Rat 9589048 Scfw3 Subcutaneous fat weight QTL 3 4.57 0.001 subcutaneous adipose mass (VT:1000472) abdominal subcutaneous fat pad weight (CMO:0002069) 6 1 42388212 Rat 9589129 Insul24 Insulin level QTL 24 19.06 0.001 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 6 1 42388212 Rat 7411603 Foco13 Food consumption QTL 13 5.5 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 6 1 42388212 Rat 7411542 Bw127 Body weight QTL 127 5.5 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 6 1 42388212 Rat 8552962 Pigfal16 Plasma insulin-like growth factor 1 level QTL 16 9.4 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 6 1 42388212 Rat 2293709 Bss23 Bone structure and strength QTL 23 5.18 0.0001 femur morphology trait (VT:0000559) femur cross-sectional area (CMO:0001661) 6 1 43665660 Rat 2293650 Bss31 Bone structure and strength QTL 31 5.05 0.0001 femur strength trait (VT:0010010) femur midshaft polar moment of inertia (CMO:0001669) 6 1 43665660 Rat 2293656 Bss28 Bone structure and strength QTL 28 6.79 0.0001 femur morphology trait (VT:0000559) femur midshaft cortical cross-sectional area (CMO:0001663) 6 1 43665660 Rat 7411584 Foco4 Food consumption QTL 4 4.3 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 6 1 44015370 Rat 738024 Sach5 Saccharine consumption QTL 5 3.9 0.00039 consumption behavior trait (VT:0002069) saccharin intake volume to total fluid intake volume ratio (CMO:0001601) 6 1 44570292 Rat 2301972 Bp325 Blood pressure QTL 325 4.8 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 6 1 75623393 Rat 1359023 Bp272 Blood pressure QTL 272 2.5 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 6 1120393 28706721 Rat 2292589 Emca10 Estrogen-induced mammary cancer QTL 10 0.048 mammary gland integrity trait (VT:0010552) post-insult time to mammary tumor formation (CMO:0000345) 6 1120393 46120393 Rat 1354664 Slep2 Serum leptin concentration QTL 2 4.49 blood leptin amount (VT:0005667) serum leptin level (CMO:0000780) 6 1120393 75023446 Rat 1576309 Emca7 Estrogen-induced mammary cancer QTL 7 4 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 6 2537030 111715717 Rat 1578665 Bss16 Bone structure and strength QTL 16 4.4 femur morphology trait (VT:0000559) bone trabecular cross-sectional area (CMO:0002311) 6 6161722 76002731 Rat 1578668 Bmd14 Bone mineral density QTL 14 3.8 femur mineral mass (VT:0010011) total volumetric bone mineral density (CMO:0001728) 6 6161722 76002731 Rat 4145119 Mcs25 Mammary carcinoma susceptibility QTL 25 0.0001 mammary gland integrity trait (VT:0010552) ratio of deaths to total study population during a period of time (CMO:0001023) 6 7009971 115379601 Rat 634322 Bw12 Body weight QTL 12 0 body mass (VT:0001259) body weight (CMO:0000012) 7 10173862 55173862 Rat 1300128 Rf16 Renal function QTL 16 3.89 renal blood flow trait (VT:2000006) absolute change in renal blood flow rate (CMO:0001168) 6 13122958 34367603 Rat 1300164 Rf15 Renal function QTL 15 3.12 renal blood flow trait (VT:2000006) absolute change in renal blood flow rate (CMO:0001168) 6 13122958 57516539 Rat 10401812 Kidm54 Kidney mass QTL 54 kidney mass (VT:0002707) both kidneys wet weight (CMO:0000085) 6 16810107 61810107 Rat 10401800 Kidm49 Kidney mass QTL 49 kidney mass (VT:0002707) both kidneys wet weight (CMO:0000085) 6 16810107 61810107 Rat 8552910 Pigfal5 Plasma insulin-like growth factor 1 level QTL 5 4.3 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 6 19417887 64417887 Rat 1641898 Colcr4 Colorectal carcinoma resistance QTL4 3.71 0.0007 intestine integrity trait (VT:0010554) well differentiated malignant colorectal tumor surface area measurement (CMO:0002077) 6 21515302 65784818 Rat 2293839 Kiddil2 Kidney dilation QTL 2 4.8 kidney pelvis morphology trait (VT:0004194) hydronephrosis severity score (CMO:0001208) 6 22042854 84763421 Rat 2293841 Kiddil4 Kidney dilation QTL 4 4.4 kidney pelvis morphology trait (VT:0004194) hydronephrosis severity score (CMO:0001208) 6 22042854 84763421 Rat