rs13452788 Marker Search Result - Rat Genome Database

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General

Marker: rs13452788

Symbol:

rs13452788

Previously known as:

MDC|rat101_006_e06.p1cb_107; ENSRNOSNP2791930; ENSEMBL|tmpshr1526302;

RGD ID:

8693337

Type:

SNV

Expected Size:

0 (bp)

Notes

G/A

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	6	9,974,277 - 9,974,277	RGD	Rnor6.0
Rnor_5.0	6	9,884,460 - 9,884,460	RGD	Rnor5.0
RGSC_v3.4	6	10,098,192 - 10,098,192	RGD	RGSC3.4
Celera	6	7,695,280 - 7,695,280	RGD

Is Marker For:

QTLs: Alc37 Alc35

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Data registered by Dr. Morton Printz	Personal communication between Dr. Printz and the RGD curators.
2.	Is the Alcohol Deprivation Effect Genetically Mediated? Studies with HXB/BXH Recombinant Inbred Rat Strains.	Vanderlinden LA, etal., Alcohol Clin Exp Res. 2014 Jun 24. doi: 10.1111/acer.12471.

Strains and Sequence

Region

Nucleotide Sequences

Additional Information

External Database Links

Database	Acc Id	Source(s)
dbSNP (RS)	rs13452788
dbSNP (SS)	ss16348899
	ss179350515
	ss194142073
Ensembl SNP	rs13452788

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Marker: rs13452788