Arhgef33 (Rho guanine nucleotide exchange factor 33) - Rat Genome Database

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Gene: Arhgef33 (Rho guanine nucleotide exchange factor 33) Rattus norvegicus
Analyze
Symbol: Arhgef33
Name: Rho guanine nucleotide exchange factor 33
RGD ID: 1560224
Description: Predicted to enable guanyl-nucleotide exchange factor activity. Orthologous to human ARHGEF33 (Rho guanine nucleotide exchange factor 33); INTERACTS WITH bisphenol A; DDT; gentamycin.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC500608; RGD1560224; Rho guanine nucleotide exchange factor (GEF) 33
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8620,303,731 - 20,469,968 (-)NCBIGRCr8
mRatBN7.2614,582,922 - 14,715,014 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl614,551,495 - 14,725,292 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.062,982,324 - 3,100,358 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl63,012,804 - 3,095,500 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.062,957,718 - 3,017,115 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.063,050,328 - 3,074,649 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.463,239,039 - 3,298,835 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera614,292,548 - 14,387,492 (-)NCBICelera
Cytogenetic Map6q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Arhgef33
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8620,303,731 - 20,469,968 (-)NCBIGRCr8
mRatBN7.2614,582,922 - 14,715,014 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl614,551,495 - 14,725,292 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.062,982,324 - 3,100,358 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl63,012,804 - 3,095,500 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.062,957,718 - 3,017,115 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.063,050,328 - 3,074,649 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.463,239,039 - 3,298,835 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera614,292,548 - 14,387,492 (-)NCBICelera
Cytogenetic Map6q12NCBI
ARHGEF33
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38238,889,875 - 38,975,454 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl238,889,875 - 38,975,454 (+)EnsemblGRCh38hg38GRCh38
GRCh37239,117,016 - 39,202,595 (+)NCBIGRCh37GRCh37hg19GRCh37
Celera238,987,224 - 39,043,310 (+)NCBICelera
Cytogenetic Map2p22.1NCBI
HuRef238,885,001 - 38,941,027 (+)NCBIHuRef
CHM1_1239,076,989 - 39,133,027 (+)NCBICHM1_1
T2T-CHM13v2.0238,898,364 - 38,983,970 (+)NCBIT2T-CHM13v2.0
Arhgef33
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391780,614,354 - 80,740,926 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1780,614,836 - 80,707,510 (+)EnsemblGRCm39 Ensembl
GRCm381780,306,923 - 80,433,497 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1780,307,407 - 80,400,081 (+)EnsemblGRCm38mm10GRCm38
MGSCv371780,706,747 - 80,788,029 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361780,255,866 - 80,296,676 (+)NCBIMGSCv36mm8
Celera1784,625,380 - 84,706,953 (+)NCBICelera
Cytogenetic Map17E3NCBI
cM Map1750.63NCBI
Arhgef33
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554416,581,454 - 6,636,828 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554416,553,460 - 6,638,776 (+)NCBIChiLan1.0ChiLan1.0
ARHGEF33
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21287,437,702 - 87,579,205 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A87,441,677 - 87,582,883 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A38,927,384 - 39,068,565 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A39,682,397 - 39,767,614 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A39,711,989 - 39,766,006 (+)Ensemblpanpan1.1panPan2
ARHGEF33
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11730,924,253 - 31,003,812 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1730,927,115 - 30,998,614 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1730,740,627 - 30,820,898 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01731,579,995 - 31,660,519 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1731,579,970 - 31,655,613 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11730,802,126 - 30,882,253 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01730,871,913 - 30,951,912 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01731,085,177 - 31,165,620 (+)NCBIUU_Cfam_GSD_1.0
Arhgef33
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629240,859,333 - 40,936,322 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650812,292,103 - 12,338,690 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650812,288,554 - 12,338,774 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARHGEF33
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3101,373,431 - 101,448,764 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13101,371,536 - 101,449,072 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23107,627,964 - 107,648,569 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ARHGEF33
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11468,410,251 - 68,490,522 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1468,413,743 - 68,490,515 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604543,483,097 - 43,570,962 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arhgef33
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473820,380,740 - 20,562,014 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473820,380,794 - 20,472,091 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Arhgef33
468 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:18
Count of miRNA genes:17
Interacting mature miRNAs:18
Transcripts:ENSRNOT00000061980
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
8693699Alc37Alcohol consumption QTL 372.60.224drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)6796416721301982Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
2293706Bmd20Bone mineral density QTL 204.30.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)6507449719988050Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
2292616Ept15Estrogen-induced pituitary tumorigenesis QTL 154.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6984331220338915Rat
738023Alc17Alcohol consumption QTL 173.10.003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)6127574569Rat
1354616Despr12Despair related QTL 120.0012locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)6127574569Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
2300176Bmd51Bone mineral density QTL 5111.70.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)6127574569Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449734434305Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
1358190Ept1Estrogen-induced pituitary tumorigenesis QTL 14.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6984331220338915Rat
2300190Bmd52Bone mineral density QTL 5211.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)6127574569Rat
8693690Alc35Alcohol consumption QTL 352.20.606drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)6796416721301982Rat

Markers in Region
D6Rat224  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2614,688,132 - 14,688,345 (-)MAPPERmRatBN7.2
Rnor_6.063,004,354 - 3,004,566NCBIRnor6.0
Rnor_5.062,983,087 - 2,983,299UniSTSRnor5.0
RGSC_v3.463,228,565 - 3,228,778RGDRGSC3.4
RGSC_v3.463,228,566 - 3,228,778UniSTSRGSC3.4
RGSC_v3.163,228,565 - 3,228,778RGD
Celera614,365,420 - 14,365,632UniSTS
FHH x ACI Map612.71RGD
FHH x ACI Map612.71UniSTS
Cytogenetic Map6q11UniSTS
RH139934  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2614,634,795 - 14,634,982 (-)MAPPERmRatBN7.2
Rnor_6.063,081,429 - 3,081,615NCBIRnor6.0
Rnor_5.063,058,442 - 3,058,628UniSTSRnor5.0
RGSC_v3.463,284,903 - 3,285,089UniSTSRGSC3.4
Celera614,311,160 - 14,311,346UniSTS
Cytogenetic Map6q11UniSTS
AU047813  
Rat AssemblyChrPosition (strand)SourceJBrowse
RGSC_v3.463,270,525 - 3,270,674UniSTSRGSC3.4
Celera614,324,158 - 14,324,307UniSTS
Cytogenetic Map6q11UniSTS
RH137715  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2614,710,884 - 14,711,011 (-)MAPPERmRatBN7.2
Rnor_6.062,981,697 - 2,981,823NCBIRnor6.0
Rnor_5.062,960,857 - 2,960,983UniSTSRnor5.0
RGSC_v3.463,205,794 - 3,205,920UniSTSRGSC3.4
Celera614,388,003 - 14,388,129UniSTS
Cytogenetic Map6q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 6 47 100 49 48 18 23 18 5 158 89 81 37 59 30

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001432097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001432101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039113069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039113072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB190504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000061980   ⟹   ENSRNOP00000062181
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl614,618,927 - 14,678,682 (-)Ensembl
Rnor_6.0 Ensembl63,012,804 - 3,095,500 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000094637   ⟹   ENSRNOP00000082755
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl614,614,362 - 14,710,362 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000108277   ⟹   ENSRNOP00000081806
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl614,618,880 - 14,725,292 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000109673   ⟹   ENSRNOP00000080298
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl614,551,495 - 14,634,133 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112916   ⟹   ENSRNOP00000081545
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl614,618,927 - 14,709,829 (-)Ensembl
RefSeq Acc Id: XM_008764441   ⟹   XP_008762663
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,130 - 20,462,589 (-)NCBI
mRatBN7.2614,618,887 - 14,710,365 (-)NCBI
Rnor_6.062,982,326 - 3,100,358 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008764443   ⟹   XP_008762665
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,592 - 20,462,590 (-)NCBI
mRatBN7.2614,621,469 - 14,714,754 (-)NCBI
Rnor_6.062,982,324 - 3,093,804 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008764445   ⟹   XP_008762667
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,592 - 20,462,589 (-)NCBI
mRatBN7.2614,619,661 - 14,714,754 (-)NCBI
Rnor_6.062,982,326 - 3,097,322 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008764449   ⟹   XP_008762671
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,592 - 20,462,588 (-)NCBI
mRatBN7.2614,619,661 - 14,714,754 (-)NCBI
Rnor_6.062,982,326 - 3,097,322 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008764450   ⟹   XP_008762672
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,424 - 20,462,588 (-)NCBI
mRatBN7.2614,619,196 - 14,714,754 (-)NCBI
Rnor_6.062,982,327 - 3,097,322 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039113069   ⟹   XP_038968997
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,130 - 20,469,968 (-)NCBI
mRatBN7.2614,618,887 - 14,714,754 (-)NCBI
RefSeq Acc Id: XM_039113072   ⟹   XP_038969000
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,332,154 - 20,462,590 (-)NCBI
mRatBN7.2614,582,922 - 14,714,754 (-)NCBI
RefSeq Acc Id: XM_063262574   ⟹   XP_063118644
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,130 - 20,462,588 (-)NCBI
RefSeq Acc Id: XM_063262575   ⟹   XP_063118645
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,130 - 20,462,591 (-)NCBI
RefSeq Acc Id: XM_063262576   ⟹   XP_063118646
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,592 - 20,462,589 (-)NCBI
RefSeq Acc Id: XM_063262577   ⟹   XP_063118647
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,430 - 20,462,589 (-)NCBI
RefSeq Acc Id: XM_063262579   ⟹   XP_063118649
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,130 - 20,462,592 (-)NCBI
RefSeq Acc Id: XM_063262580   ⟹   XP_063118650
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,592 - 20,462,591 (-)NCBI
RefSeq Acc Id: XM_063262581   ⟹   XP_063118651
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,130 - 20,462,587 (-)NCBI
RefSeq Acc Id: XM_063262582   ⟹   XP_063118652
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,371,592 - 20,462,591 (-)NCBI
RefSeq Acc Id: XR_010052185
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,303,731 - 20,462,590 (-)NCBI
RefSeq Acc Id: XR_010052186
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8620,303,731 - 20,462,589 (-)NCBI
RefSeq Acc Id: XP_008762663   ⟸   XM_008764441
- Peptide Label: isoform X1
- UniProtKB: A0A8I6G7U0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008762672   ⟸   XM_008764450
- Peptide Label: isoform X8
- UniProtKB: D3Z8W6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008762667   ⟸   XM_008764445
- Peptide Label: isoform X6
- UniProtKB: D3Z8W6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008762671   ⟸   XM_008764449
- Peptide Label: isoform X7
- UniProtKB: D3Z8W6 (UniProtKB/TrEMBL),   A0A8I5ZT03 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008762665   ⟸   XM_008764443
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSRNOP00000062181   ⟸   ENSRNOT00000061980
RefSeq Acc Id: XP_038969000   ⟸   XM_039113072
- Peptide Label: isoform X4
- UniProtKB: D3Z8W6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038968997   ⟸   XM_039113069
- Peptide Label: isoform X1
- UniProtKB: A0A8I6G7U0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000080298   ⟸   ENSRNOT00000109673
Ensembl Acc Id: ENSRNOP00000082755   ⟸   ENSRNOT00000094637
Ensembl Acc Id: ENSRNOP00000081806   ⟸   ENSRNOT00000108277
Ensembl Acc Id: ENSRNOP00000081545   ⟸   ENSRNOT00000112916
RefSeq Acc Id: XP_063118649   ⟸   XM_063262579
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063118645   ⟸   XM_063262575
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063118644   ⟸   XM_063262574
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063118651   ⟸   XM_063262581
- Peptide Label: isoform X11
RefSeq Acc Id: XP_063118647   ⟸   XM_063262577
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063118652   ⟸   XM_063262582
- Peptide Label: isoform X12
RefSeq Acc Id: XP_063118650   ⟸   XM_063262580
- Peptide Label: isoform X10
RefSeq Acc Id: XP_063118646   ⟸   XM_063262576
- Peptide Label: isoform X6
Protein Domains
DH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3Z8W6-F1-model_v2 AlphaFold D3Z8W6 1-852 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1560224 AgrOrtholog
BioCyc Gene G2FUF-38527 BioCyc
Ensembl Genes ENSRNOG00000007061 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000061980.5 UniProtKB/TrEMBL
  ENSRNOT00000094637.1 UniProtKB/TrEMBL
  ENSRNOT00000108277.1 UniProtKB/TrEMBL
  ENSRNOT00000109673.1 UniProtKB/TrEMBL
  ENSRNOT00000112916.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.900.10 UniProtKB/TrEMBL
InterPro ARHGEF33 UniProtKB/TrEMBL
  DBL_dom_sf UniProtKB/TrEMBL
  DH-domain UniProtKB/TrEMBL
NCBI Gene 500608 ENTREZGENE
PANTHER PTHR46944 UniProtKB/TrEMBL
  RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 33 UniProtKB/TrEMBL
Pfam RhoGEF UniProtKB/TrEMBL
PhenoGen Arhgef33 PhenoGen
PROSITE DH_2 UniProtKB/TrEMBL
RatGTEx ENSRNOG00000007061 RatGTEx
SMART RhoGEF UniProtKB/TrEMBL
Superfamily-SCOP DH-domain UniProtKB/TrEMBL
UniProt A0A8I5ZPA5_RAT UniProtKB/TrEMBL
  A0A8I5ZT03 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZTN1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6G7U0 ENTREZGENE, UniProtKB/TrEMBL
  D3Z8W6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-19 Arhgef33  Rho guanine nucleotide exchange factor 33  Arhgef33  Rho guanine nucleotide exchange factor (GEF) 33  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2013-11-22 Arhgef33  Rho guanine nucleotide exchange factor (GEF) 33  RGD1560224  RGD1560224  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1560224  RGD1560224   RGD1560224_predicted  RGD1560224 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1560224_predicted  RGD1560224 (predicted)  LOC500608  LOC500608  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC500608  LOC500608      Symbol and Name status set to provisional 70820 PROVISIONAL