LOC108351167 (uncharacterized LOC108351167) - Rat Genome Database

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Gene: LOC108351167 (uncharacterized LOC108351167) Rattus norvegicus
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Symbol: LOC108351167
Name: uncharacterized LOC108351167
RGD ID: 11423888
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8614,798,525 - 14,827,742 (+)NCBIGRCr8
mRatBN7.269,045,610 - 9,061,487 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.068,864,198 - 8,884,481 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Celera68,775,147 - 8,795,631 (+)NCBICelera
Cytogenetic Map6q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in LOC108351167
30 total Variants

1 to 10 of 24 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
8693699Alc37Alcohol consumption QTL 372.60.224drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)6796416721301982Rat
2293706Bmd20Bone mineral density QTL 204.30.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)6507449719988050Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat

1 to 10 of 24 rows





1 to 16 of 16 rows
RefSeq Transcripts XR_001838258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001838259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001838260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001838261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001838262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001838263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001843882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001843883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001843884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001843885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001843886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001843887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005505660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005505661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005505662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 16 of 16 rows

RefSeq Acc Id: XR_005505660
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8614,798,525 - 14,827,742 (+)NCBI
mRatBN7.269,045,610 - 9,061,487 (+)NCBI
RefSeq Acc Id: XR_005505661
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8614,798,525 - 14,827,742 (+)NCBI
mRatBN7.269,045,610 - 9,061,487 (+)NCBI
RefSeq Acc Id: XR_005505662
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8614,798,525 - 14,827,742 (+)NCBI
mRatBN7.269,045,610 - 9,061,487 (+)NCBI


1 to 9 of 9 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-38670 BioCyc
NCBI Gene LOC108351167 ENTREZGENE
PhenoGen LOC108351167 PhenoGen
RNAcentral URS0000CCE318 RNACentral
  URS0000CCF181 RNACentral
  URS0000CCF6A5 RNACentral
  URS0000CCF91D RNACentral
  URS0000CCFF1C RNACentral
  URS0000CD0495 RNACentral
1 to 9 of 9 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-02 LOC108351167  uncharacterized LOC108351167      Symbol and Name status set to provisional 70820 PROVISIONAL