Ralbp1l2 (ralA binding protein 1 like 2) - Rat Genome Database

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Gene: Ralbp1l2 (ralA binding protein 1 like 2) Rattus norvegicus
Analyze
Symbol: Ralbp1l2
Name: ralA binding protein 1 like 2
RGD ID: 1585856
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC680933; nidogen-2-like; ralA-binding protein 1-like; similar to nidogen 2; uncharacterized protein LOC680933
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr865,813,664 - 5,922,703 (-)NCBIGRCr8
mRatBN7.2638,788 - 192,192 (-)NCBImRatBN7.2mRatBN7.2
Cytogenetic Map6q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. GOA pipeline RGD automated data pipeline

Genomics

Variants

.
Variants in Ralbp1l2
471 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
738023Alc17Alcohol consumption QTL 173.10.003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)6127574569Rat
1354616Despr12Despair related QTL 120.0012locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)6127574569Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
2300176Bmd51Bone mineral density QTL 5111.70.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)6127574569Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
2300190Bmd52Bone mineral density QTL 5211.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)6127574569Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_063262722   ⟹   XP_063118792
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr865,813,664 - 5,922,703 (-)NCBI
Protein Sequences
Protein RefSeqs XP_063118792 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_063118792   ⟸   XM_063262722


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-38853 BioCyc
NCBI Gene 680933 ENTREZGENE
PhenoGen Ralbp1l2 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-10-13 Ralbp1l2  ralA binding protein 1 like 2  Ralbp1l1  ralA binding protein 1 like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2023-09-19 Ralbp1l1  ralA binding protein 1 like 1  LOC680933  similar to nidogen 2  Symbol and Name Changed 1299863 APPROVED
2008-01-09 LOC680933  similar to nidogen 2  LOC683009  similar to nidogen 2  Data merged from RGD:1591598 1643240 APPROVED
2006-11-20 LOC683009  similar to nidogen 2      Symbol and Name status set to provisional 70820 PROVISIONAL
2006-11-19 LOC680933  similar to nidogen 2      Symbol and Name status set to provisional 70820 PROVISIONAL